>gb|AE017263.1| Mesoplasma florum L1 complete genome
          Length = 793224

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 61     gagaaaaagaaaactatgaagc 82
              ||||||||||||||||||||||
Sbjct: 679535 gagaaaaagaaaactatgaagc 679514

>gb|AC140398.2| Mus musculus BAC clone RP23-162P5 from chromosome 5, complete sequence
          Length = 200640

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 59     aggagaaaaagaaaactatgaa 80
              ||||||||||||||||||||||
Sbjct: 128212 aggagaaaaagaaaactatgaa 128191

>gb|AC160129.2| Mus musculus BAC clone RP23-253N17 from chromosome 9, complete sequence
          Length = 205094

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 336    tgcttcttttctggggctcttg 357
              ||||||||||||||||||||||
Sbjct: 146719 tgcttcttttctggggctcttg 146698

>gb|AC103936.9| Mus musculus chromosome 9, clone RP24-361K14, complete sequence
          Length = 184968

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 336    tgcttcttttctggggctcttg 357
              ||||||||||||||||||||||
Sbjct: 151770 tgcttcttttctggggctcttg 151791

>gb|AC005229.2| Homo sapiens PAC clone RP5-1136G13 from 7q31-q35, complete sequence
          Length = 183386

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 556    ctgtagggtctgcatcagctt 576
              |||||||||||||||||||||
Sbjct: 176173 ctgtagggtctgcatcagctt 176153

>gb|AC104083.3| Homo sapiens BAC clone RP11-588K22 from 4, complete sequence
          Length = 196537

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 97    aaaagaatgtacaagcacaag 117
             |||||||||||||||||||||
Sbjct: 58136 aaaagaatgtacaagcacaag 58156

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 458      tttgtcatttgttgatgatggaaca 482
                |||||||||| ||||||||||||||
Sbjct: 16640503 tttgtcatttcttgatgatggaaca 16640479

>dbj|AK101496.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043F22, full
           insert sequence
          Length = 4339

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 458 tttgtcatttgttgatgatggaaca 482
           |||||||||| ||||||||||||||
Sbjct: 853 tttgtcatttcttgatgatggaaca 877

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 458      tttgtcatttgttgatgatggaaca 482
                |||||||||| ||||||||||||||
Sbjct: 16593736 tttgtcatttcttgatgatggaaca 16593712

>emb|AL713948.4|CNS07YPR Oryza sativa chromosome 12, . BAC OJ1008_A01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 129944

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 458   tttgtcatttgttgatgatggaaca 482
             |||||||||| ||||||||||||||
Sbjct: 30263 tttgtcatttcttgatgatggaaca 30287

>gb|AE014831.1| Plasmodium falciparum 3D7 chromosome 10 section 3 of 7 of the complete
             sequence
          Length = 250195

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    agaaaaagaaaactatgaag 81
             ||||||||||||||||||||
Sbjct: 29503 agaaaaagaaaactatgaag 29522

>gb|AY814274.1| Schistosoma japonicum SJCHGC09168 protein mRNA, partial cds
          Length = 726

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 163 ggggaaggcctgatgaaagc 182
           ||||||||||||||||||||
Sbjct: 222 ggggaaggcctgatgaaagc 203

>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12
          Length = 306650

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 169    ggcctgatgaaagcggctgc 188
              ||||||||||||||||||||
Sbjct: 296330 ggcctgatgaaagcggctgc 296311

>gb|AC157800.9| Mus musculus chromosome 1, clone RP24-286C21, complete sequence
          Length = 164708

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 437   agaaacaagcttgctggttt 456
             ||||||||||||||||||||
Sbjct: 12767 agaaacaagcttgctggttt 12748

>dbj|AK056734.1| Homo sapiens cDNA FLJ32172 fis, clone PLACE6000555
          Length = 1936

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 38   ccacaactgcacaaagccac 57
            ||||||||||||||||||||
Sbjct: 1098 ccacaactgcacaaagccac 1079

>gb|AC120549.22| Mus musculus chromosome 1, clone RP23-172L16, complete sequence
          Length = 210516

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   agaaacaagcttgctggttt 456
             ||||||||||||||||||||
Sbjct: 12424 agaaacaagcttgctggttt 12443

>gb|AC009502.4| Homo sapiens BAC clone RP11-512O7 from 2, complete sequence
          Length = 194958

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    ccacaactgcacaaagccac 57
             ||||||||||||||||||||
Sbjct: 22561 ccacaactgcacaaagccac 22542

>gb|AC009501.4| Homo sapiens BAC clone RP11-511I11 from 2, complete sequence
          Length = 157173

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    taggagaaaaagaaaactat 77
             ||||||||||||||||||||
Sbjct: 79060 taggagaaaaagaaaactat 79041

>gb|AC157956.2| Pan troglodytes BAC clone CH251-379N13 from chromosome unknown, complete
              sequence
          Length = 164394

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 38     ccacaactgcacaaagccac 57
              ||||||||||||||||||||
Sbjct: 131284 ccacaactgcacaaagccac 131303

>emb|AL954704.10| Zebrafish DNA sequence from clone DKEY-110K21 in linkage group 7,
              complete sequence
          Length = 179095

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 332    attgtgcttcttttctgggg 351
              ||||||||||||||||||||
Sbjct: 128753 attgtgcttcttttctgggg 128734

>emb|BX276177.6| Zebrafish DNA sequence from clone CH211-223M11 in linkage group 20,
             complete sequence
          Length = 202340

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    gagaaaaagaaaactatgaa 80
             ||||||||||||||||||||
Sbjct: 13242 gagaaaaagaaaactatgaa 13223

>gb|AF130561.1|AF130561 Felis catus clone Fca193 microsatellite sequence
          Length = 262

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 448 tgctggtttctttgtcattt 467
           ||||||||||||||||||||
Sbjct: 91  tgctggtttctttgtcattt 72

>emb|AL132994.4|CNS01DU0 Human chromosome 14 DNA sequence BAC R-506K19 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 180273

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 462    tcatttgttgatgatggaac 481
              ||||||||||||||||||||
Sbjct: 174069 tcatttgttgatgatggaac 174050

>gb|AC102858.11| Mus musculus chromosome 5, clone RP24-507F5, complete sequence
          Length = 176211

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    tgctacaaaatattctgttg 161
              ||||||||||||||||||||
Sbjct: 121479 tgctacaaaatattctgttg 121498

>gb|AC135015.3| Mus musculus BAC clone RP24-227L14 from 8, complete sequence
          Length = 169193

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 532   caccatccttgtcttctcct 551
             ||||||||||||||||||||
Sbjct: 78792 caccatccttgtcttctcct 78811

>emb|AL713990.16| Mouse DNA sequence from clone RP23-224N1 on chromosome X, complete
              sequence
          Length = 163330

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    ttgcacagggagtgccatat 333
              ||||||||||||||||||||
Sbjct: 106570 ttgcacagggagtgccatat 106551

>dbj|AP004473.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10J15, TM0007,
             complete sequence
          Length = 92741

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    taggagaaaaagaaaactat 77
             ||||||||||||||||||||
Sbjct: 37871 taggagaaaaagaaaactat 37890

>emb|AL808118.8| Mouse DNA sequence from clone RP23-287O8 on chromosome 4, complete
             sequence
          Length = 164068

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    aagccactaggagaaaaaga 70
             ||||||||||||||||||||
Sbjct: 12266 aagccactaggagaaaaaga 12247

>emb|AL805969.13| Mouse DNA sequence from clone RP23-40L1 on chromosome 4, complete
              sequence
          Length = 252953

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     aggagaaaaagaaaactatg 78
              ||||||||||||||||||||
Sbjct: 239757 aggagaaaaagaaaactatg 239738


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,366,773
Number of Sequences: 3902068
Number of extensions: 6366773
Number of successful extensions: 124869
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124730
Number of HSP's gapped (non-prelim): 139
length of query: 584
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 561
effective length of database: 17,143,297,704
effective search space: 9617390011944
effective search space used: 9617390011944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)