ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags7a14 |
|---|---|
| Clone Library Name | barley_pub |
>RL3_ORYSA (P35684) 60S ribosomal protein L3| Length = 388 Score = 361 bits (927), Expect = e-99 Identities = 172/184 (93%), Positives = 177/184 (96%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVS 501 E+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP RVS Sbjct: 204 EIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 263 Query: 500 YTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKAD 321 YTVARAGQNGYHH T MNKKVYKIGK GQE+H A TEFDRTEKDITPMGGFPHYGVVK D Sbjct: 264 YTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGD 323 Query: 320 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFY 141 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF+DTSSKFGHGRFQTTDEKQRF+ Sbjct: 324 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFF 383 Query: 140 GKLK 129 GKLK Sbjct: 384 GKLK 387
>RL3B_ARATH (P22738) 60S ribosomal protein L3| Length = 389 Score = 340 bits (873), Expect = 2e-93 Identities = 157/182 (86%), Positives = 171/182 (93%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVS 501 +VP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP RVS Sbjct: 204 QVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 263 Query: 500 YTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKAD 321 YTVARAGQNGYHH T MNKKVY++GKVGQETH A TE+DRTEKDITPMGGFPHYG+VK D Sbjct: 264 YTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMTEYDRTEKDITPMGGFPHYGIVKED 323 Query: 320 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFY 141 YLMIKGCCVGPKKRVVTLRQ+LLKQTSRLA+EEIKLKF+D +S GHGRFQT+ EK +FY Sbjct: 324 YLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKLKFIDAASNGGHGRFQTSQEKAKFY 383 Query: 140 GK 135 G+ Sbjct: 384 GR 385
>RL3A_ARATH (P17094) 60S ribosomal protein L3| Length = 388 Score = 334 bits (856), Expect = 2e-91 Identities = 155/183 (84%), Positives = 170/183 (92%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVS 501 ++PI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP RVS Sbjct: 204 QIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 263 Query: 500 YTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKAD 321 YTVARAGQNGYHH T +NKK+Y++GKVG E H A TE+DRTEKD+TPMGGFPHYG+VK D Sbjct: 264 YTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFPHYGIVKDD 323 Query: 320 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFY 141 YLMIKGCCVGPKKRVVTLRQSLL QTSRLALEEIKLKF+DT+S FGHGRFQT+ EK RFY Sbjct: 324 YLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKLKFIDTASIFGHGRFQTSLEKMRFY 383 Query: 140 GKL 132 ++ Sbjct: 384 NRV 386
>RL3_TOXCA (P49149) 60S ribosomal protein L3| Length = 401 Score = 263 bits (671), Expect = 5e-70 Identities = 120/187 (64%), Positives = 150/187 (80%), Gaps = 3/187 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVS 501 +VP+D+VF +DEMID IGVTKGKG++GV +RW +LPRKTH+GLRKVACIGAWHP RV Sbjct: 203 QVPVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQ 262 Query: 500 YTVARAGQNGYHHXTXMNKKVYKIGK---VGQETHDASTEFDRTEKDITPMGGFPHYGVV 330 +TVARAGQ GYHH T +NKK+Y++GK + + T++D TEK + PMGGFPHYG+V Sbjct: 263 FTVARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKKNGGTDYDITEKSVNPMGGFPHYGLV 322 Query: 329 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 150 D++MI+GCCVG KKR +TLR+SL+ QT R A E+I LK++DTSSKFGHGRFQT EK+ Sbjct: 323 NQDFVMIRGCCVGSKKRPITLRKSLIVQTKRFAHEKINLKWIDTSSKFGHGRFQTHAEKR 382 Query: 149 RFYGKLK 129 F GKLK Sbjct: 383 AFMGKLK 389
>RL3_DROME (O16797) 60S ribosomal protein L3| Length = 415 Score = 261 bits (666), Expect = 2e-69 Identities = 125/190 (65%), Positives = 148/190 (77%), Gaps = 7/190 (3%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVSY 498 + + VF +DEMID +GVTKGKG++GV +RW +LPRKTH+GLRKVACIGAWHP RVS Sbjct: 204 IQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVST 263 Query: 497 TVARAGQNGYHHXTXMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGGFPHY 339 TVARAGQ GYHH T +NKK+Y+IG G T D ASTE+D T+K ITPMGGFPHY Sbjct: 264 TVARAGQKGYHHRTEINKKIYRIG-AGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHY 322 Query: 338 GVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTD 159 G V D++MIKGCC+G KKR++TLR+SLLK T R ALE+IKLKF+DTSSK GHGRFQT Sbjct: 323 GEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPA 382 Query: 158 EKQRFYGKLK 129 +K F G LK Sbjct: 383 DKLAFMGPLK 392
>RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)| Length = 402 Score = 258 bits (660), Expect = 9e-69 Identities = 124/190 (65%), Positives = 154/190 (81%), Gaps = 6/190 (3%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVS 501 +VP++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHP RV+ Sbjct: 203 QVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVA 262 Query: 500 YTVARAGQNGYHHXTXMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHY 339 +TVARAGQ GYHH T +NKK+YKIG K G+ ++AST++D ++K I P+GGF HY Sbjct: 263 FTVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHY 322 Query: 338 GVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTD 159 G V D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT + Sbjct: 323 GEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTME 382 Query: 158 EKQRFYGKLK 129 EK+ F G LK Sbjct: 383 EKKAFMGPLK 392
>RL3_RAT (P21531) 60S ribosomal protein L3 (L4)| Length = 402 Score = 257 bits (656), Expect = 3e-68 Identities = 123/190 (64%), Positives = 154/190 (81%), Gaps = 6/190 (3%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVS 501 +VP++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHP RV+ Sbjct: 203 QVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVA 262 Query: 500 YTVARAGQNGYHHXTXMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHY 339 ++VARAGQ GYHH T +NKK+YKIG K G+ ++AST++D ++K I P+GGF HY Sbjct: 263 FSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHY 322 Query: 338 GVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTD 159 G V D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT + Sbjct: 323 GEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTME 382 Query: 158 EKQRFYGKLK 129 EK+ F G LK Sbjct: 383 EKKAFMGPLK 392
>RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B)| (TARBP-B) Length = 402 Score = 256 bits (655), Expect = 3e-68 Identities = 123/190 (64%), Positives = 154/190 (81%), Gaps = 6/190 (3%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVS 501 +VP++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHP RV+ Sbjct: 203 QVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVA 262 Query: 500 YTVARAGQNGYHHXTXMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHY 339 ++VARAGQ GYHH T +NKK+YKIG K G+ ++AST++D ++K I P+GGF HY Sbjct: 263 FSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHY 322 Query: 338 GVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTD 159 G V D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT + Sbjct: 323 GEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTME 382 Query: 158 EKQRFYGKLK 129 EK+ F G LK Sbjct: 383 EKKAFMGPLK 392
>RL3_BOVIN (P39872) 60S ribosomal protein L3| Length = 402 Score = 256 bits (655), Expect = 3e-68 Identities = 123/190 (64%), Positives = 153/190 (80%), Gaps = 6/190 (3%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVS 501 +VP+ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHP RV+ Sbjct: 203 QVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVA 262 Query: 500 YTVARAGQNGYHHXTXMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHY 339 ++VARAGQ GYHH T +NKK+YKIG K G+ ++AST++D ++K I P+GGF HY Sbjct: 263 FSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHY 322 Query: 338 GVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTD 159 G V D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT + Sbjct: 323 GEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTVE 382 Query: 158 EKQRFYGKLK 129 EK+ F G LK Sbjct: 383 EKKAFMGPLK 392
>RL3_CAEEL (P50880) 60S ribosomal protein L3| Length = 401 Score = 254 bits (649), Expect = 2e-67 Identities = 117/187 (62%), Positives = 150/187 (80%), Gaps = 3/187 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVS 501 +V +D VF +DEMID IGVT+G G++GV +RW +LPRKTH+GLRKVACIGAWHP RV+ Sbjct: 204 QVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVA 263 Query: 500 YTVARAGQNGYHHXTXMNKKVYKIGK---VGQETHDASTEFDRTEKDITPMGGFPHYGVV 330 +TVARAGQ G+HH T +N K+Y+IGK + ++ STEFD T+K ITPMGGFP YG+V Sbjct: 264 FTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRYGIV 323 Query: 329 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 150 DY+M++G +GPKKR++TLR+SL+ QT R+A E+I LK++DTSSK GHGRFQTT EK+ Sbjct: 324 NQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKR 383 Query: 149 RFYGKLK 129 F GKLK Sbjct: 384 AFMGKLK 390
>RL3_ASHGO (Q759R7) 60S ribosomal protein L3| Length = 388 Score = 254 bits (648), Expect = 2e-67 Identities = 122/183 (66%), Positives = 145/183 (79%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVSY 498 V +D+VF+++EMID+I VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHP V + Sbjct: 204 VSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMW 263 Query: 497 TVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 318 TVARAGQNGYHH T +N KVY+IGK G E +A+TEFDRT+K ITPMGGF HYG V D+ Sbjct: 264 TVARAGQNGYHHRTSINHKVYRIGKGGDE-GNAATEFDRTKKTITPMGGFVHYGAVNNDF 322 Query: 317 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 138 +M+KG G +KRVVTLR+SL TSR ALEE+ LK++DT+SKFG GRFQT EK F G Sbjct: 323 VMVKGSIPGTRKRVVTLRKSLYTSTSRRALEEVNLKWIDTASKFGKGRFQTPAEKHAFMG 382 Query: 137 KLK 129 LK Sbjct: 383 TLK 385
>RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3| Length = 401 Score = 252 bits (644), Expect = 6e-67 Identities = 116/187 (62%), Positives = 149/187 (79%), Gaps = 3/187 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVS 501 ++ +D VF +DEMID IGVTKG G++GV +RW +LPRKTH+GLRKVACIGAWHP RV+ Sbjct: 204 QIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVA 263 Query: 500 YTVARAGQNGYHHXTXMNKKVYKIGK---VGQETHDASTEFDRTEKDITPMGGFPHYGVV 330 +TVARAGQ G+HH T +N K+Y+IGK + ++ STEFD T+K I PMGGFP YG+V Sbjct: 264 FTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTINPMGGFPRYGLV 323 Query: 329 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 150 DY+M++G +GPKKR++TLR+SL+ QT R+A E+I LK++DTSSK GHGRFQTT EK+ Sbjct: 324 NQDYVMLRGAILGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKR 383 Query: 149 RFYGKLK 129 F GKLK Sbjct: 384 AFMGKLK 390
>RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3| Length = 402 Score = 251 bits (641), Expect = 1e-66 Identities = 122/190 (64%), Positives = 153/190 (80%), Gaps = 6/190 (3%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVS 501 +VP++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGA HP RV+ Sbjct: 203 QVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGARHPARVA 262 Query: 500 YTVARAGQNGYHHXTXMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHY 339 ++VARAGQ GYHH T +NKK+YKIG K G+ ++AST++D ++K I P+GGF HY Sbjct: 263 FSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHY 322 Query: 338 GVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTD 159 G V D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT + Sbjct: 323 GEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTME 382 Query: 158 EKQRFYGKLK 129 EK+ F G LK Sbjct: 383 EKKAFMGPLK 392
>RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)| Length = 392 Score = 248 bits (632), Expect = 2e-65 Identities = 116/183 (63%), Positives = 146/183 (79%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVSY 498 + ID++F+KDEMID+I VTKG G++GV +RWG +LPRKTH+GLRKVACIGAWHP V + Sbjct: 204 IEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQW 263 Query: 497 TVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 318 TVARAGQ GYHH T N KV++IGK G + +AST+FD ++K ITPMGGF YG VK DY Sbjct: 264 TVARAGQMGYHHRTSCNHKVFRIGK-GSDEGNASTDFDISKKQITPMGGFVRYGEVKNDY 322 Query: 317 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 138 +M+KG G KKRV+TLR++L QTSR A E+++LK++DTSSKFGHG FQT +EK+ F G Sbjct: 323 IMVKGSVPGVKKRVMTLRKTLYPQTSRRATEKVELKWIDTSSKFGHGAFQTPEEKRAFMG 382 Query: 137 KLK 129 LK Sbjct: 383 TLK 385
>RL3_KLULA (Q6CJR7) 60S ribosomal protein L3| Length = 387 Score = 246 bits (628), Expect = 5e-65 Identities = 115/183 (62%), Positives = 144/183 (78%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVSY 498 V +D+VF+++EMID++ VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHP V + Sbjct: 203 VAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMW 262 Query: 497 TVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 318 +VARAGQ GYHH T +N KVY++GK G + +A+TEFDRT+K ITPMGGF HYG + D+ Sbjct: 263 SVARAGQRGYHHRTSINHKVYRVGK-GDDEANAATEFDRTKKTITPMGGFVHYGAINNDF 321 Query: 317 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 138 +++KG G +KRVVTLR+SL TSR ALEE+ LK++DT+SKFG GRFQT EK F G Sbjct: 322 VILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKWIDTASKFGKGRFQTPAEKHAFLG 381 Query: 137 KLK 129 LK Sbjct: 382 TLK 384
>RL3_DICDI (P34113) 60S ribosomal protein L3| Length = 397 Score = 246 bits (628), Expect = 5e-65 Identities = 114/187 (60%), Positives = 143/187 (76%), Gaps = 4/187 (2%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVSY 498 V + VF ++E+ID+IGVTKGKG+ GV+ RWGV +LPRKTH+GLRKVACIGAWHP RVS Sbjct: 205 VNVTGVFAENELIDVIGVTKGKGFNGVIKRWGVRKLPRKTHKGLRKVACIGAWHPSRVST 264 Query: 497 TVARAGQNGYHHXTXMNKKVYKIGKV----GQETHDASTEFDRTEKDITPMGGFPHYGVV 330 TV RAGQ GYHH NKK+Y+IG+ G++ TEFD TEK I PMGGF HYG+V Sbjct: 265 TVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAHYGMV 324 Query: 329 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 150 K ++LM+KGC GP+KR +TLR+S+ QT R ALE+I LKF+DTSSKFGHG QT ++K Sbjct: 325 KHEFLMLKGCVAGPRKRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQTAEDKT 384 Query: 149 RFYGKLK 129 +++G K Sbjct: 385 KYFGVKK 391
>RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Maintenance of| killer protein 8) (Trichodermin resistance protein) Length = 386 Score = 244 bits (624), Expect = 1e-64 Identities = 114/183 (62%), Positives = 142/183 (77%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVSY 498 V +D+VF+++EMID I VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHP V + Sbjct: 202 VAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMW 261 Query: 497 TVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 318 +VARAGQ GYH T +N K+Y++GK G + + +T FDRT+K ITPMGGF HYG +K D+ Sbjct: 262 SVARAGQRGYHSRTSINHKIYRVGK-GDDEANGATSFDRTKKTITPMGGFVHYGEIKNDF 320 Query: 317 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 138 +M+KGC G +KR+VTLR+SL TSR ALEE+ LK++DT+SKFG GRFQT EK F G Sbjct: 321 IMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDTASKFGKGRFQTPAEKHAFMG 380 Query: 137 KLK 129 LK Sbjct: 381 TLK 383
>RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like| Length = 406 Score = 243 bits (621), Expect = 3e-64 Identities = 115/191 (60%), Positives = 145/191 (75%), Gaps = 7/191 (3%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVS 501 +VP+ +VF ++E+ID+I VTKG+G +GV +RW +LPRKTH+GLRKVACIGAWHP RV Sbjct: 203 QVPVHSVFSQNEIIDVIAVTKGRGIKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVG 262 Query: 500 YTVARAGQNGYHHXTXMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGGFPH 342 ++ARAGQ GYHH T +NKK+Y+IG+ G D AST +D T+K ITP+GGFPH Sbjct: 263 CSIARAGQKGYHHRTELNKKIYRIGR-GLHMEDGKVVKNNASTSYDVTDKSITPLGGFPH 321 Query: 341 YGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTT 162 YG V D++M+KGC G KKRV+TLR+SLL SR ALE I+LKF+DT+SKFGHGRFQT Sbjct: 322 YGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQALENIELKFIDTTSKFGHGRFQTA 381 Query: 161 DEKQRFYGKLK 129 EK+ F G K Sbjct: 382 QEKRAFMGPQK 392
>RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3| Length = 387 Score = 243 bits (620), Expect = 4e-64 Identities = 116/183 (63%), Positives = 142/183 (77%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVSY 498 V +D+VF+++EMID I VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHP V + Sbjct: 203 VSVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMW 262 Query: 497 TVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 318 +VARAGQ GYHH T +N K+Y+IGK G + +A+T FDRT+K I PMGGF HYG+V D+ Sbjct: 263 SVARAGQRGYHHRTSINHKIYRIGK-GDDEGNAATNFDRTKKTINPMGGFVHYGMVNNDF 321 Query: 317 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 138 +M+KG G KKRVVTLR+SL TSR A+EE+ LK++DT+SKFG GRFQT EK F G Sbjct: 322 VMVKGSIPGCKKRVVTLRKSLYTNTSRKAVEEVTLKWIDTASKFGKGRFQTPAEKHAFMG 381 Query: 137 KLK 129 LK Sbjct: 382 TLK 384
>RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3| Length = 389 Score = 242 bits (618), Expect = 7e-64 Identities = 114/183 (62%), Positives = 139/183 (75%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVSY 498 V +D+VF+KDEM+D+ VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHP V + Sbjct: 203 VSVDSVFEKDEMVDVAAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPANVQW 262 Query: 497 TVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 318 TVARAGQNG+HH T +N KVY++G G E+ A TEFDRT+K I PMGGF YG VK D+ Sbjct: 263 TVARAGQNGFHHRTSINHKVYRVGSAGDESSGA-TEFDRTKKTINPMGGFVRYGNVKNDF 321 Query: 317 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 138 +++KG G KKR+VT+R+SL TSR A E + LK++DT+SKFG GRFQT EK F G Sbjct: 322 MLLKGSIPGVKKRIVTIRKSLYVDTSRRATENVNLKWIDTASKFGKGRFQTPAEKHAFLG 381 Query: 137 KLK 129 LK Sbjct: 382 TLK 384
>RL3B_SCHPO (P36584) 60S ribosomal protein L3-B| Length = 387 Score = 240 bits (612), Expect = 3e-63 Identities = 115/183 (62%), Positives = 140/183 (76%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVSY 498 V I + F+++EMID+IGVT+GKG EG RWG RLPRKTHRGLRKVACIGAWHP V + Sbjct: 202 VDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQW 261 Query: 497 TVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 318 TVARAG GY H T +N K+Y+IG G + +AST+FD TEK ITPMGGF YGVV+ D+ Sbjct: 262 TVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVVENDF 320 Query: 317 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 138 +M+ G GP KRV+TLR+SLL TSR ALE + LK++DT+SKFGHGRFQT E ++F G Sbjct: 321 VMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFLG 380 Query: 137 KLK 129 LK Sbjct: 381 TLK 383
>RL3A_SCHPO (P40372) 60S ribosomal protein L3-A| Length = 387 Score = 240 bits (612), Expect = 3e-63 Identities = 115/183 (62%), Positives = 140/183 (76%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVSY 498 V I + F+++EMID+IGVT+GKG EG RWG RLPRKTHRGLRKVACIGAWHP V + Sbjct: 202 VDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQW 261 Query: 497 TVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 318 TVARAG GY H T +N K+Y+IG G + +AST+FD TEK ITPMGGF YGVV+ D+ Sbjct: 262 TVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVVENDF 320 Query: 317 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 138 +M+ G GP KRV+TLR+SLL TSR ALE + LK++DT+SKFGHGRFQT E ++F G Sbjct: 321 VMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFLG 380 Query: 137 KLK 129 LK Sbjct: 381 TLK 383
>RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like| Length = 406 Score = 239 bits (611), Expect = 4e-63 Identities = 113/191 (59%), Positives = 143/191 (74%), Gaps = 7/191 (3%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVS 501 +VP+ +VF + E+ID+I VTKG+G +GV +RW +LPRKTH+GLRKVACIGAWHP RV Sbjct: 203 QVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVG 262 Query: 500 YTVARAGQNGYHHXTXMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGGFPH 342 ++ARAGQ GYHH T +NKK+++IG+ G D AST +D T K ITP+GGFPH Sbjct: 263 CSIARAGQKGYHHRTELNKKIFRIGR-GPHMEDGKLVKNNASTSYDVTAKSITPLGGFPH 321 Query: 341 YGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTT 162 YG V D++M+KGC G KKRV+TLR+SLL SR A+E I+LKF+DT+SKFGHGRFQT Sbjct: 322 YGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRFQTA 381 Query: 161 DEKQRFYGKLK 129 EK+ F G K Sbjct: 382 QEKRAFMGPQK 392
>RL3_NEUCR (P59671) 60S ribosomal protein L3| Length = 392 Score = 238 bits (607), Expect = 1e-62 Identities = 112/183 (61%), Positives = 141/183 (77%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVSY 498 V ID++F+KDE+ID+I VTKG G+ GV RWG +LPRKTH+GLRKVACIGAWHP V + Sbjct: 204 VSIDSIFEKDEVIDVIAVTKGHGFTGVTARWGTKKLPRKTHKGLRKVACIGAWHPSHVQW 263 Query: 497 TVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 318 TVARAGQ GYHH T +N K+Y+IGK G A+TE D T+K ITPMGGF YG + D+ Sbjct: 264 TVARAGQAGYHHRTSVNHKIYRIGK-GDAEDSAATEVDVTKKKITPMGGFVRYGEINNDF 322 Query: 317 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 138 +M+KG G KKRV+TLR+S+ TSR ALE+++LK++DTSS+FGHG FQT EK++F G Sbjct: 323 VMVKGSVPGVKKRVMTLRKSMFVHTSRKALEKVELKWIDTSSEFGHGAFQTPAEKKQFQG 382 Query: 137 KLK 129 LK Sbjct: 383 TLK 385
>RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3| Length = 383 Score = 223 bits (568), Expect = 4e-58 Identities = 111/184 (60%), Positives = 138/184 (75%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVS 501 E+ I VF +E ID IGVTKGKG++G V R+GV + PRK+ +G+RKVACIGAWHP RV Sbjct: 198 EIAIGEVFGVNENIDTIGVTKGKGFQGTVKRFGVRKQPRKSRKGIRKVACIGAWHPSRVM 257 Query: 500 YTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKAD 321 Y++ARAGQ G+H T NK+VY I G + + TEFD TEK I+PMGGFPHYG V+ D Sbjct: 258 YSIARAGQMGFHRRTEKNKRVYMI---GNGSSNIKTEFDLTEKPISPMGGFPHYGEVRND 314 Query: 320 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFY 141 ++M+KG VG +KRVVTLR+SLL+Q A EE+ +KFVDTSSK GHGRFQT+ EK+ FY Sbjct: 315 FIMVKGAVVGARKRVVTLRKSLLRQR---AGEELVIKFVDTSSKIGHGRFQTSAEKKAFY 371 Query: 140 GKLK 129 G K Sbjct: 372 GARK 375
>RL3_PIG (Q29293) 60S ribosomal protein L3 (Fragment)| Length = 130 Score = 163 bits (413), Expect = 4e-40 Identities = 76/129 (58%), Positives = 99/129 (76%), Gaps = 6/129 (4%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVSY 498 VP++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHP R ++ Sbjct: 2 VPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARXAF 61 Query: 497 TVARAGQNGYHHXTXMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYG 336 +VARAGQ GYHH T +NKK+YKIG K G+ ++ T++D ++K I P+G F HYG Sbjct: 62 SVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNXXTDYDLSDKSINPLGRFVHYG 121 Query: 335 VVKADYLMI 309 V D++M+ Sbjct: 122 EVTNDFVML 130
>RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P| Length = 365 Score = 141 bits (356), Expect = 2e-33 Identities = 67/164 (40%), Positives = 102/164 (62%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVS 501 E+ + V ++ E++D+I VTKGKG +G V RWG+ K +G RKV IG WHP RV Sbjct: 206 ELRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVM 265 Query: 500 YTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKAD 321 +TV AGQ G+HH T +NK++ IG+ G+ D +TE +ITP GGFPHYG+V++D Sbjct: 266 WTVPMAGQMGFHHRTELNKRLIAIGENGKLKLDENTEI-----EITPKGGFPHYGIVRSD 320 Query: 320 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 189 ++MI G G KR++ +R ++ + ++ ++ +V SK Sbjct: 321 FMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 364
>RL3_PYRHO (O59418) 50S ribosomal protein L3P| Length = 362 Score = 139 bits (350), Expect = 8e-33 Identities = 66/164 (40%), Positives = 99/164 (60%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVS 501 E+ + V ++ E++D+I VTKGKG +G V RWG+ K +G RKV IG WHP RV Sbjct: 204 EIRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVM 263 Query: 500 YTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKAD 321 +TV AGQ G+HH T +NK++ IG+ G+ D E +ITP GGFPHYG+V+ D Sbjct: 264 WTVPMAGQMGFHHRTELNKRLIAIGENGK------LVIDGNEIEITPKGGFPHYGIVRGD 317 Query: 320 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 189 ++MI G G KR++ +R ++ + ++ ++ +V SK Sbjct: 318 FMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 361
>RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P| Length = 361 Score = 139 bits (349), Expect = 1e-32 Identities = 66/164 (40%), Positives = 100/164 (60%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVS 501 E+ + V ++ E++D+I VTKGKG +G V RWG+ K +G RKV IG WHP RV Sbjct: 203 ELRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVM 262 Query: 500 YTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKAD 321 +TV AGQ G+HH T +NK++ IG+ G+ D E +ITP GGFPHYG+V++D Sbjct: 263 WTVPMAGQMGFHHRTELNKRLIAIGENGK------LVIDGNEIEITPKGGFPHYGIVRSD 316 Query: 320 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 189 ++MI G G KR++ +R ++ + ++ ++ +V SK Sbjct: 317 FMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 360
>RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P| Length = 346 Score = 127 bits (320), Expect = 2e-29 Identities = 66/166 (39%), Positives = 98/166 (59%), Gaps = 2/166 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPXR 507 E+ V + E++D+I VTKGKG +G V RWGV K R R + +G WHP R Sbjct: 186 ELRAGEVLHEGELLDVIAVTKGKGTQGPVKRWGVKVQFHKAQRAGKGRHIGNLGPWHPAR 245 Query: 506 VSYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 327 V +TV +AGQ G+HH T NK++ IG+ G+ D + E +ITP GGFPHYG+V+ Sbjct: 246 VMWTVPQAGQMGFHHRTEFNKRLIAIGENGKLVLDGN------EIEITPKGGFPHYGIVR 299 Query: 326 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 189 +D+LMI+G G KR++ +R ++ + +E ++ +V SK Sbjct: 300 SDFLMIEGTIPGSFKRIIRVRPAIRPPKKKPPVERPQITYVSRESK 345
>RL3_METJA (P54014) 50S ribosomal protein L3P| Length = 335 Score = 125 bits (313), Expect = 2e-28 Identities = 68/168 (40%), Positives = 99/168 (58%), Gaps = 2/168 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT-RLPRKTHRGL-RKVACIGAWHPXR 507 ++ I VFQ+ E++D IGVTKGKG++G V RWGV + + +G+ R V IG W P Sbjct: 183 QLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQPKM 242 Query: 506 VSYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 327 V ++V GQ GYH T NK++ KIG G E ITP GGF HYGV++ Sbjct: 243 VMWSVPMPGQMGYHQRTEYNKRILKIGNNGDE--------------ITPKGGFLHYGVIR 288 Query: 326 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 183 +Y+++KG GP KR++ LR+++ Q + + EI ++ T+SK G Sbjct: 289 NNYVVLKGSVQGPAKRLIVLRRAIRPQEPLIKVPEI--TYISTTSKQG 334
>RL3_ARCFU (O28354) 50S ribosomal protein L3P| Length = 331 Score = 124 bits (310), Expect = 3e-28 Identities = 64/168 (38%), Positives = 98/168 (58%), Gaps = 2/168 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPXR 507 E+ + VF + +ID+I VTKGKG++G V RWGV L K R R+V +G W+P Sbjct: 179 EISVSEVFDEGAIIDVIAVTKGKGFQGPVKRWGVITLDAKHARSSKHRRVGNLGPWNPHH 238 Query: 506 VSYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 327 V +TV +AGQ G+H T NK++ KIG+ G+E ITP GGF HYGV++ Sbjct: 239 VRWTVPQAGQMGFHQRTEYNKRLIKIGENGEE--------------ITPKGGFLHYGVIR 284 Query: 326 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 183 Y+++ G GP KR++ +R ++ + + + + + +V T+SK G Sbjct: 285 TQYVLVTGSVPGPVKRLIRMRDAI--RPPKAHFDGVNIVYVSTTSKQG 330
>RL3_METKA (Q8TY90) 50S ribosomal protein L3P| Length = 361 Score = 122 bits (305), Expect = 1e-27 Identities = 64/144 (44%), Positives = 87/144 (60%), Gaps = 2/144 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPXR 507 E+ VF + E++D+ +TKGKG++GVV RWGVT RKT R R + IG P R Sbjct: 189 EIRAKDVFDEGEIVDVSAITKGKGFQGVVKRWGVTIQDRKTQRKQKGRHIGSIGPITPSR 248 Query: 506 VSYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 327 V +TV AGQ GYH T NK++ KIG+ G+E +TP GGF +YGVV+ Sbjct: 249 VRWTVPMAGQVGYHQRTEHNKRILKIGEDGEE--------------VTPRGGFVNYGVVR 294 Query: 326 ADYLMIKGCCVGPKKRVVTLRQSL 255 DY+MI G GPKKR++ +R ++ Sbjct: 295 GDYIMIHGTVPGPKKRLIRVRPAV 318
>RL3_METVA (Q9UWG2) 50S ribosomal protein L3P| Length = 334 Score = 115 bits (288), Expect = 1e-25 Identities = 65/166 (39%), Positives = 92/166 (55%), Gaps = 2/166 (1%) Frame = -3 Query: 671 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT-RLPRKTHRGL-RKVACIGAWHPXRVSY 498 I+ VF+ E ID + VTKGKG++G V RWGV + + +G+ R+ IG W P RV + Sbjct: 185 INDVFETGEFIDTLAVTKGKGFQGPVKRWGVKIQFGKHQRKGVGRQTGSIGPWRPKRVMW 244 Query: 497 TVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 318 TV AGQ G+H T NK++ K+G G E ITP GGF +YG VK Y Sbjct: 245 TVPLAGQMGFHQRTEYNKRILKLGSEGAE--------------ITPKGGFLNYGAVKNGY 290 Query: 317 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGH 180 +++KG GP KR+V LR ++ + L E+ ++ SK G+ Sbjct: 291 VVVKGTVQGPAKRLVVLRGAVRPAEDKFGLPEV--TYISKESKQGN 334
>RL3_METAC (Q8TRU7) 50S ribosomal protein L3P| Length = 337 Score = 114 bits (285), Expect = 3e-25 Identities = 62/167 (37%), Positives = 93/167 (55%), Gaps = 2/167 (1%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPXRV 504 V + VF+ ++D +T GKG +G V RWG+ + K R LR+V +GA++P RV Sbjct: 187 VSVTDVFKNGTLVDTAAITIGKGTQGPVKRWGIQLMKGKHSRQGSLRQVGTLGAFNPSRV 246 Query: 503 SYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 324 S+ V + GQ GYH T NK++ KIG G+E +TP GGF +YG+V+ Sbjct: 247 SWRVPQMGQMGYHQRTEFNKRILKIGSDGEE--------------VTPEGGFINYGLVRG 292 Query: 323 DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 183 DY++IKG GP KR++ LR + + + L E + ++ SK G Sbjct: 293 DYILIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRESKQG 337
>RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P| Length = 338 Score = 112 bits (281), Expect = 8e-25 Identities = 62/135 (45%), Positives = 81/135 (60%), Gaps = 2/135 (1%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPXRVSYTVA 489 VF +++D+I VTKGKGY+GV+ R+GVT LPR K +G R+ IG P V +T Sbjct: 194 VFTPGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGPQAPA-VMFTQP 252 Query: 488 RAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 309 R GQ G+H T NK++ KIG+ G E ITP GFPHYGVVK Y++I Sbjct: 253 RPGQMGFHQRTEYNKRLLKIGENGAE--------------ITPKSGFPHYGVVKGPYILI 298 Query: 308 KGCCVGPKKRVVTLR 264 +G G +KR+V LR Sbjct: 299 QGSVPGARKRLVVLR 313
>RL3_METTH (O26110) 50S ribosomal protein L3P| Length = 337 Score = 112 bits (281), Expect = 8e-25 Identities = 64/169 (37%), Positives = 93/169 (55%), Gaps = 3/169 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPXR 507 +V +F + +D I VTKGKG++G V RWG+ K R R + +G W P R Sbjct: 183 DVRASEIFSEGAFVDAIAVTKGKGFQGPVKRWGIRIQYGKAARSSKGRHIGSLGPWTPSR 242 Query: 506 VSYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKD-ITPMGGFPHYGVV 330 +TV +AGQ GYH T NK++ KIG D +E D + P GGF YG+V Sbjct: 243 TMWTVPQAGQMGYHRRTEYNKQILKIG-------------DASEADLVNPDGGFVRYGLV 289 Query: 329 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 183 + DY+MIKG GP KR+V LR+++ + + E ++ ++ T+SK G Sbjct: 290 RNDYVMIKGSVPGPTKRLVVLRKAI--RAAGKQEEAPQINYISTASKQG 336
>RL3_METMA (Q8PV50) 50S ribosomal protein L3P| Length = 337 Score = 110 bits (274), Expect = 5e-24 Identities = 60/167 (35%), Positives = 92/167 (55%), Gaps = 2/167 (1%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPXRV 504 V + VF+ ++D +T GKG +G V RWG+ K R LR++ +G+++P RV Sbjct: 187 VNVTDVFKNGTVVDTAAITIGKGTQGPVKRWGIQLQKGKHSRQGSLRQIGTLGSFNPSRV 246 Query: 503 SYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 324 S+ V + GQ GYH T NK++ KIG G+E +TP GGF +YG+V+ Sbjct: 247 SWRVPQMGQMGYHQRTEFNKRILKIGSDGEE--------------VTPEGGFINYGLVRG 292 Query: 323 DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 183 DY++IKG GP KR++ LR + + + L E + ++ SK G Sbjct: 293 DYVLIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRESKQG 337
>RL3_THEVO (Q97BX7) 50S ribosomal protein L3P| Length = 331 Score = 106 bits (264), Expect = 7e-23 Identities = 59/155 (38%), Positives = 84/155 (54%) Frame = -3 Query: 647 EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVSYTVARAGQNGY 468 + +D++ VTKGKG+ G V R+GV LPRK + R + +G WHP V TV +AGQ GY Sbjct: 190 KFVDVLSVTKGKGFTGHVQRFGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGY 249 Query: 467 HHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGP 288 T N +V K K DA T I GGF HYG+VK DY+++ G GP Sbjct: 250 QQRTISNVRVLKYSK----GEDADT--------INVRGGFLHYGLVKNDYVLLFGSVPGP 297 Query: 287 KKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 183 KR++ +R ++ ++ +KL ++ SK G Sbjct: 298 AKRLIKMRDPARQKVP--DIDNVKLDYISLESKQG 330
>RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P| Length = 331 Score = 103 bits (258), Expect = 4e-22 Identities = 57/155 (36%), Positives = 83/155 (53%) Frame = -3 Query: 647 EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVSYTVARAGQNGY 468 + +D++ +TKGKG+ G V R+GV LPRK + R + +G WHP V TV +AGQ G+ Sbjct: 190 KFVDVVSITKGKGFTGHVKRFGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGF 249 Query: 467 HHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGP 288 T N +V K G E D I GGF HYG VK DY+++ G G Sbjct: 250 QQRTISNVRVIKYGN--------KEEVD----SINVRGGFLHYGFVKNDYVLLFGSIPGA 297 Query: 287 KKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 183 KR++ +R ++ +EE+KL+++ SK G Sbjct: 298 SKRLIKMRDPARQKVP--DIEEVKLEYISLESKQG 330
>RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P| Length = 334 Score = 99.4 bits (246), Expect = 9e-21 Identities = 60/162 (37%), Positives = 84/162 (51%), Gaps = 2/162 (1%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPXRVSYTVA 489 VF+ E D G+TKGKG +G V RWGV + K R R++ +G W+P RV TV Sbjct: 190 VFRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVP 249 Query: 488 RAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 309 + GQ GYH T +NK++ I G E TP GGFP+YG V Y ++ Sbjct: 250 QQGQTGYHQRTELNKRLIDIND-GDEP--------------TPDGGFPNYGEVDGPYTLV 294 Query: 308 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 183 KG GP++R+V R ++ S E+ ++V T+S G Sbjct: 295 KGSVPGPEQRLVRFRPAVRPNESPRLDPEV--RYVSTASNQG 334
>RL3_NANEQ (P60458) 50S ribosomal protein L3P| Length = 321 Score = 99.4 bits (246), Expect = 9e-21 Identities = 54/155 (34%), Positives = 86/155 (55%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVS 501 E+ I+ VF++ + +D+I VTKGKG++GV+ R+ V R K+ +G+RKV IG+ P R+ Sbjct: 176 ELSINDVFKEGQYVDVIAVTKGKGFQGVIKRFHVHRRQHKSEKGVRKVGAIGSRGPGRIF 235 Query: 500 YTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKAD 321 TV GQ GYH T NK + KIG + + GG+ YG V Sbjct: 236 PTVPMPGQMGYHRRTEYNKLIIKIG-----------------EPLNVEGGWVRYGQVIGP 278 Query: 320 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 216 +++KG GP+KR++ LR+++ + +E I+ Sbjct: 279 TILLKGSVPGPRKRLIILREAIRPPRKQEKVEGIE 313
>RL3_SULTO (Q975I1) 50S ribosomal protein L3P| Length = 343 Score = 98.6 bits (244), Expect = 2e-20 Identities = 64/162 (39%), Positives = 90/162 (55%), Gaps = 2/162 (1%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPXRVSYTVA 489 VF++ ++IDIIGVTKGKG++GVV R+GV LPR K +G RKV G SY V Sbjct: 200 VFKEGQLIDIIGVTKGKGFQGVVKRYGVVELPRWHKHRKGSRKVGARGPSF-STPSY-VP 257 Query: 488 RAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 309 + GQ GYH T NK++ KI +I P GGF +YG+V+ YL+I Sbjct: 258 QPGQMGYHRRTEYNKRILKISD--------------DPNEINPKGGFVNYGIVRNTYLII 303 Query: 308 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 183 +G +G KKR + LR + + S + K+ +V+ S+ G Sbjct: 304 EGSIIGAKKRPLFLRYPI--RPSWIPQSAPKITYVNLYSQQG 343
>RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)| Length = 337 Score = 97.4 bits (241), Expect = 3e-20 Identities = 54/144 (37%), Positives = 77/144 (53%), Gaps = 2/144 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPXR 507 E ++ +F+ E D+ GVTKGKG +G V RWGV + K R R++ +G W+P R Sbjct: 187 EHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSR 246 Query: 506 VSYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 327 V TV + GQ GYH T +NK++ IG+ + T D GGF +YG V Sbjct: 247 VRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVD---------------GGFVNYGEVD 291 Query: 326 ADYLMIKGCCVGPKKRVVTLRQSL 255 Y ++KG GP KR+V R ++ Sbjct: 292 GPYTLVKGSVPGPDKRLVRFRPAV 315
>RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P| Length = 344 Score = 96.7 bits (239), Expect = 6e-20 Identities = 52/169 (30%), Positives = 92/169 (54%), Gaps = 4/169 (2%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPXRV 504 + ++ VF++ +++D+I VTKGKG++GV+ RWGV LPR K +G R++ H Sbjct: 191 IAVNDVFEEGQLVDVIAVTKGKGFQGVIKRWGVKELPRWHKHRKGSRRIGARS--HGRST 248 Query: 503 SYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 324 + +AGQ G+H T NK++ I G + +TP GGF YGVV++ Sbjct: 249 FWETPQAGQTGFHRRTEYNKRILMIDDDGYK--------------VTPAGGFLRYGVVRS 294 Query: 323 DYLMIKGCCVGPKKRVVTLRQSLL--KQTSRLALEEIKLKFVDTSSKFG 183 ++M+ G G KR + +R ++ + +L + + ++ ++ +SK G Sbjct: 295 TFVMLSGSIPGTPKRPIVMRWAIRPPEWYLKLGVRKPEITYISLASKQG 343
>RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P| Length = 351 Score = 96.3 bits (238), Expect = 8e-20 Identities = 55/142 (38%), Positives = 81/142 (57%), Gaps = 2/142 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPXR 507 E+ I VF++ ++ID++GVTKGKG+ GV+ R+ V LPR K +G RK+ G Sbjct: 202 EITIRDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGT 260 Query: 506 VSYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 327 SYT + GQ G+H T NK++ KIG K+I P GGF YG+V+ Sbjct: 261 PSYT-PQPGQLGFHRRTEYNKRIIKIGD--------------EPKEINPAGGFVRYGIVR 305 Query: 326 ADYLMIKGCCVGPKKRVVTLRQ 261 Y++++G +G KKR + LR+ Sbjct: 306 NTYVLLEGSILGSKKRPIFLRE 327
>RL3_SULAC (Q4JB40) 50S ribosomal protein L3P| Length = 342 Score = 92.8 bits (229), Expect = 9e-19 Identities = 59/168 (35%), Positives = 91/168 (54%), Gaps = 2/168 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPXR 507 ++P+ VF++ ++ DIIGVTKGKG++GV+ R+ V PR K +G RK+ G Sbjct: 193 QIPVRDVFREGQLTDIIGVTKGKGFQGVIKRYSVVEFPRWHKHRKGSRKIGARGP-SIST 251 Query: 506 VSYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 327 SY V + GQ G+H T NK++ KIG +I P GG +YG+VK Sbjct: 252 PSY-VPQPGQLGFHRRTEYNKRIIKIGD--------------NVNEINPAGGIVNYGLVK 296 Query: 326 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 183 YL+I+G +G +KR + LR + S + K+ +V+ +S+ G Sbjct: 297 NTYLVIEGSVLGSRKRPLFLRYPIRPSWSPESAP--KITYVNLASQQG 342
>RL3_CLOTE (Q890N9) 50S ribosomal protein L3| Length = 209 Score = 52.0 bits (123), Expect = 2e-06 Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 4/146 (2%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHP 513 E+ +D +F+ E ID+ G +KGKGY+G++ RW R P K HR + + A +P Sbjct: 96 EIKVD-IFEAGEKIDVTGTSKGKGYQGIIKRWNAHRGPMSHGSKFHRAVGSMG--AASYP 152 Query: 512 XRVSYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGV 333 R AG G T +N +V K + Sbjct: 153 ARTFKNKRMAGHMGNVKSTVLNLEVVKT-------------------------------I 181 Query: 332 VKADYLMIKGCCVGPKKRVVTLRQSL 255 + + ++IKG GP K V +R S+ Sbjct: 182 PEKNLILIKGGIPGPNKGYVIIRNSI 207
>RL3_BACST (P28600) 50S ribosomal protein L3| Length = 213 Score = 50.8 bits (120), Expect = 4e-06 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPXRV 504 EV +D +F + +++D+ G++KGKG++G + R G +R P R R+ +GA P RV Sbjct: 96 EVKVD-IFSEGDIVDVTGISKGKGFQGAIKRHGQSRGPMAHGSRYHRRPGSMGAIAPNRV 154 Query: 503 SYTVARAGQNGYHHXTXMNKKVYKI 429 T G+ G T N K+ K+ Sbjct: 155 FKTKNLPGRMGGERVTIQNLKIVKV 179
>RL3_ENTFA (Q839G4) 50S ribosomal protein L3| Length = 209 Score = 50.8 bits (120), Expect = 4e-06 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 1/143 (0%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPXRV 504 E+ +D VFQ +++D+ G TKGKG++G + R G +R P R R+ +G P RV Sbjct: 96 EIKVD-VFQAGDVVDVTGTTKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNRV 154 Query: 503 SYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 324 AG+ G T N +V K+ V+ Sbjct: 155 FKNKRLAGRMGGDRVTIQNLEVVKVD-------------------------------VER 183 Query: 323 DYLMIKGCCVGPKKRVVTLRQSL 255 + ++IKG G KK ++T++ ++ Sbjct: 184 NVILIKGNIPGAKKSLITIKSAV 206
>RL3_CLOAB (Q97EH8) 50S ribosomal protein L3| Length = 209 Score = 50.8 bits (120), Expect = 4e-06 Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 4/140 (2%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPXRVSYT 495 +F E +D+ GV+KGKG++G + RWG R P K HR + + G+ P R + Sbjct: 101 IFAAGEKVDVSGVSKGKGFQGTIRRWGAHRGPMSHGSKFHRAVGSMG--GSSDPSRTFKS 158 Query: 494 VARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 315 G G+ + T +N +V K+ + + + + Sbjct: 159 KKMPGHMGHVNTTVLNVEVAKV-------------------------------IPEKNLI 187 Query: 314 MIKGCCVGPKKRVVTLRQSL 255 +IKG GP K V ++ S+ Sbjct: 188 LIKGGVPGPNKSFVVIKNSV 207
>RL3_PORGI (Q7MTL3) 50S ribosomal protein L3| Length = 205 Score = 48.9 bits (115), Expect = 1e-05 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Frame = -3 Query: 659 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPXRVSYTV 492 F + +D++G +KGKG++GVV R G + + T H LR +GA +P +V Sbjct: 100 FSDADFVDVVGTSKGKGFQGVVKRHGFGGVGQATHGQHNRLRAPGAVGACSYPAKVFKGT 159 Query: 491 ARAGQNGYHHXTXMNKKVYKI 429 AGQ G T N +V K+ Sbjct: 160 RMAGQMGNERVTVQNLEVIKV 180
>RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3| Length = 209 Score = 47.8 bits (112), Expect = 3e-05 Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 4/146 (2%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHP 513 E+ +D F+ + +D+ GV+KGKG++G + RW +R P K HR + A P Sbjct: 96 EIKVDT-FEIGDKVDVSGVSKGKGFQGTIKRWNASRGPMSHGSKFHRAPGSMG--AASDP 152 Query: 512 XRVSYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGV 333 R G G + T +N +V KI EK+I Sbjct: 153 SRTFKNKRMPGHMGAKNTTVLNLEVVKI---------------MPEKNI----------- 186 Query: 332 VKADYLMIKGCCVGPKKRVVTLRQSL 255 ++IKG GP K V +R S+ Sbjct: 187 -----ILIKGGIPGPNKGTVVIRNSV 207
>RL3_BACCR (Q81J42) 50S ribosomal protein L3| Length = 210 Score = 47.4 bits (111), Expect = 4e-05 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPXRV 504 EV +D VF E++D+ G++KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 96 EVKVD-VFATGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNRV 154 Query: 503 SYTVARAGQNGYHHXTXMNKKVYKI 429 AG+ G T N ++ ++ Sbjct: 155 FKGKKLAGRMGGDQVTIQNLEIVQV 179
>RL3_BACAN (Q81VT0) 50S ribosomal protein L3| Length = 210 Score = 47.4 bits (111), Expect = 4e-05 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPXRV 504 EV +D VF E++D+ G++KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 96 EVKVD-VFATGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNRV 154 Query: 503 SYTVARAGQNGYHHXTXMNKKVYKI 429 AG+ G T N ++ ++ Sbjct: 155 FKGKKLAGRMGGDQVTIQNLEIVQV 179
>RL3_LISMO (Q8Y440) 50S ribosomal protein L3| Length = 209 Score = 46.6 bits (109), Expect = 7e-05 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPXRV 504 EV +D VF + ++ID GV+KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 96 EVKVD-VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 154 Query: 503 SYTVARAGQNGYHHXTXMNKKVYKI 429 G+ G T N ++ K+ Sbjct: 155 FKNKLLPGRMGGEQITIQNLEIVKV 179
>RL3_LISMF (Q71WE6) 50S ribosomal protein L3| Length = 209 Score = 46.6 bits (109), Expect = 7e-05 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPXRV 504 EV +D VF + ++ID GV+KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 96 EVKVD-VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 154 Query: 503 SYTVARAGQNGYHHXTXMNKKVYKI 429 G+ G T N ++ K+ Sbjct: 155 FKNKLLPGRMGGEQITIQNLEIVKV 179
>RL3_LISIN (Q927K7) 50S ribosomal protein L3| Length = 209 Score = 46.6 bits (109), Expect = 7e-05 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPXRV 504 EV +D VF + ++ID GV+KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 96 EVKVD-VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 154 Query: 503 SYTVARAGQNGYHHXTXMNKKVYKI 429 G+ G T N ++ K+ Sbjct: 155 FKNKLLPGRMGGEQITIQNLEIVKV 179
>RL3_BACTN (Q8A476) 50S ribosomal protein L3| Length = 205 Score = 46.2 bits (108), Expect = 9e-05 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPXRVSYT 495 +F +D++G +KGKG++GVV R G + + T H RK IGA +P +V Sbjct: 99 MFNDATFVDVVGTSKGKGFQGVVKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKG 158 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 + GQ G T N +V K+ Sbjct: 159 MRMGGQLGGDRVTVQNLQVLKV 180
>RK3_CHLS6 (Q7XYP4) 50S ribosomal protein L3, chloroplast precursor| Length = 302 Score = 45.4 bits (106), Expect = 2e-04 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 4/79 (5%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHP 513 ++ + +F+ +++D+ G + GKG++G + RWG+ R P K+HR + C P Sbjct: 184 QLKAEELFEVGDLVDVSGTSSGKGFQGSIRRWGMKRGPMSHGSKSHRQHGSIGCSAT--P 241 Query: 512 XRVSYTVARAGQNGYHHXT 456 RV + AG+ G T Sbjct: 242 SRVYKGLKMAGRMGNERKT 260
>RL3_SPIKU (P60457) 50S ribosomal protein L3| Length = 258 Score = 45.1 bits (105), Expect = 2e-04 Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 1/137 (0%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWHPXRVSYTVAR 486 +F E +D+ G +KGKG+ G + R +R P G R V +GA P R+ + Sbjct: 98 IFTAGEFVDVTGTSKGKGFTGSIKRHNYSRGPMGHGSGYHRGVGSMGAIAPNRILKSKKM 157 Query: 485 AGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 306 G G T N ++ I TEK+ L++K Sbjct: 158 PGHIGTEKVTIQNLEIIAID---------------TEKNA----------------LLVK 186 Query: 305 GCCVGPKKRVVTLRQSL 255 G GPKK+ V +++++ Sbjct: 187 GSIPGPKKQFVVIKEAI 203
>RL3_STRP6 (Q5XED5) 50S ribosomal protein L3| Length = 208 Score = 45.1 bits (105), Expect = 2e-04 Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 1/136 (0%) Frame = -3 Query: 659 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPXRVSYTVARA 483 F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159 Query: 482 GQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKG 303 G+ G + T N ++ ++ +++ + +++KG Sbjct: 160 GRMGGNRVTVQNLEIVQV-------------------------------ILEKNVILVKG 188 Query: 302 CCVGPKKRVVTLRQSL 255 G KK ++T++ ++ Sbjct: 189 NVPGAKKSLITIKSAV 204
>RL3_STRP1 (Q9A1X4) 50S ribosomal protein L3| Length = 208 Score = 45.1 bits (105), Expect = 2e-04 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%) Frame = -3 Query: 659 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPXRVSYTVARA 483 F+ +++D+ G++KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGISKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159 Query: 482 GQNGYHHXTXMNKKVYKI 429 G+ G + T N ++ ++ Sbjct: 160 GRMGGNRVTVQNLEIVQV 177
>RL3_BIFLO (Q8G417) 50S ribosomal protein L3| Length = 213 Score = 45.1 bits (105), Expect = 2e-04 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HPXRVSYTV 492 +F++ +D+ G TKGKG+ G + RWG R +H+ R+ +GA P R+ Sbjct: 103 LFEEGAEVDVTGTTKGKGFAGTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGK 162 Query: 491 ARAGQNGYHHXTXMNKKV 438 AG+ G+ T N V Sbjct: 163 RMAGRMGHVTATTQNLTV 180
>RL3_MYCPU (Q98PY0) 50S ribosomal protein L3| Length = 266 Score = 45.1 bits (105), Expect = 2e-04 Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 6/160 (3%) Frame = -3 Query: 665 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG------LRKVACIGAWHPXRV 504 ++F E +D+ G++KGKG+ G + R ++ K+H G +R+ +G +V Sbjct: 97 SIFTPGEFVDVTGISKGKGFAGTIKRHN-QKIGPKSHGGGGGSKPVRQTGSLGDISGNKV 155 Query: 503 SYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 324 + G G+ T N +V VK Sbjct: 156 VKGMTMPGHLGHEQVTIQNLEVIMTD-------------------------------VKN 184 Query: 323 DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFV 204 + L++KG GPKK V +++ K S+ A++ + L+ V Sbjct: 185 NILLVKGAVPGPKKGFVVIKECAKKIPSKEAVKLVDLEIV 224
>RL3_BACSU (P42920) 50S ribosomal protein L3 (BL3)| Length = 209 Score = 45.1 bits (105), Expect = 2e-04 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPXRV 504 EV ++ +F E++D+ GV+KGKG++G + R G +R P R R+ +G P RV Sbjct: 96 EVKVE-IFSAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVDPNRV 154 Query: 503 SYTVARAGQNGYHHXTXMNKKVYKI 429 G+ G T N ++ K+ Sbjct: 155 FKGKLLPGRMGGEQITVQNLEIVKV 179
>RL3_THETN (Q8R7V4) 50S ribosomal protein L3| Length = 210 Score = 44.7 bits (104), Expect = 3e-04 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGA-WH 516 E+ +D +F+ + +D+ G++KGKG+ GV+ R+G R P K H R+V +GA Sbjct: 96 EIKVD-IFKPGDRVDVTGISKGKGFAGVIKRYGARRGPMSHGSKYH---RRVGSMGATTD 151 Query: 515 PXRVSYTVARAGQNGYHHXTXMNKKVYKI 429 P R G+ G T N +V K+ Sbjct: 152 PGRTFKGKKMPGRMGSDRVTIQNLEVVKV 180
>RL3_TROWT (Q83FY6) 50S ribosomal protein L3| Length = 210 Score = 44.3 bits (103), Expect = 3e-04 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIGAWH-PXRVSYTV 492 +FQ+ +++D++G +KGKG+ G + R +HR RK +GA P RV Sbjct: 96 IFQEGQLVDVVGKSKGKGFSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGT 155 Query: 491 ARAGQNGYHHXTXMNKKVYKI 429 AG+ G T N ++ KI Sbjct: 156 RMAGRLGSSRVTVHNLRLVKI 176
>RL3_TROW8 (Q83I78) 50S ribosomal protein L3| Length = 210 Score = 44.3 bits (103), Expect = 3e-04 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIGAWH-PXRVSYTV 492 +FQ+ +++D++G +KGKG+ G + R +HR RK +GA P RV Sbjct: 96 IFQEGQLVDVVGKSKGKGFSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGT 155 Query: 491 ARAGQNGYHHXTXMNKKVYKI 429 AG+ G T N ++ KI Sbjct: 156 RMAGRLGSSRVTVHNLRLVKI 176
>RL3_AQUPY (Q9ZI50) 50S ribosomal protein L3| Length = 244 Score = 44.3 bits (103), Expect = 3e-04 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIG 525 E+ + VF+ +++D+ G++KG+G+ GV+ RW PR HR R V IG Sbjct: 97 ELRVQDVFKPGDLVDVWGISKGRGFAGVMKRWDFAGFPRSHGHRYHRAVGAIG 149
>RL3_STRP8 (P60452) 50S ribosomal protein L3| Length = 208 Score = 43.9 bits (102), Expect = 5e-04 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = -3 Query: 659 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPXRVSYTVARA 483 F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159 Query: 482 GQNGYHHXTXMNKKVYKI 429 G+ G + T N ++ ++ Sbjct: 160 GRMGGNRVTVQNLEIVQV 177
>RL3_STRP3 (P60451) 50S ribosomal protein L3| Length = 208 Score = 43.9 bits (102), Expect = 5e-04 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = -3 Query: 659 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPXRVSYTVARA 483 F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159 Query: 482 GQNGYHHXTXMNKKVYKI 429 G+ G + T N ++ ++ Sbjct: 160 GRMGGNRVTVQNLEIVQV 177
>RL3_STRA5 (Q8E2D1) 50S ribosomal protein L3| Length = 208 Score = 43.9 bits (102), Expect = 5e-04 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = -3 Query: 659 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPXRVSYTVARA 483 F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159 Query: 482 GQNGYHHXTXMNKKVYKI 429 G+ G + T N ++ ++ Sbjct: 160 GRMGGNRVTVQNLEIVQV 177
>RL3_STRA3 (Q8E7T8) 50S ribosomal protein L3| Length = 208 Score = 43.9 bits (102), Expect = 5e-04 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = -3 Query: 659 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPXRVSYTVARA 483 F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159 Query: 482 GQNGYHHXTXMNKKVYKI 429 G+ G + T N ++ ++ Sbjct: 160 GRMGGNRVTVQNLEIVQV 177
>RL3_OCEIH (Q8ETY2) 50S ribosomal protein L3| Length = 209 Score = 43.9 bits (102), Expect = 5e-04 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPXR 507 E+ +D +F+ E ID+ G +KGKG++GV+ R G R P TH R +G P R Sbjct: 96 EIKVD-IFESGEKIDVTGTSKGKGFQGVIKRHGQQRGP-TTHGSHFHRAPGAMGVIDPMR 153 Query: 506 VSYTVARAGQNGYHHXTXMNKKVYKI 429 V G G T N +V + Sbjct: 154 VFKGKKLPGHMGSEQVTIQNLEVVSV 179
>RL3_STRMU (Q8DS16) 50S ribosomal protein L3| Length = 208 Score = 43.1 bits (100), Expect = 8e-04 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = -3 Query: 659 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPXRVSYTVARA 483 F+ +++D+ G TKGKG++G + R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGTTKGKGFQGAIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159 Query: 482 GQNGYHHXTXMNKKVYKI 429 G+ G + T N +V ++ Sbjct: 160 GRMGGNRVTVQNLEVVQV 177
>RL3_BACHD (Q9Z9L4) 50S ribosomal protein L3| Length = 209 Score = 43.1 bits (100), Expect = 8e-04 Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 1/143 (0%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPXRV 504 E+ +DA F + +++D+ G +KGKG+ G + R R P R R+ +G P RV Sbjct: 96 EIKVDA-FAEGDIVDVTGTSKGKGFAGAIKRHNQARGPMSHGSRYHRRPGSMGPVDPNRV 154 Query: 503 SYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 324 A G+ G T N ++ K+ + Sbjct: 155 FKGKALPGRMGGEQVTVQNLEIIKVD-------------------------------AER 183 Query: 323 DYLMIKGCCVGPKKRVVTLRQSL 255 + L++KG G KK VT+R ++ Sbjct: 184 NLLLVKGNVPGAKKSYVTVRSAI 206
>RL3_CHLTE (Q8KAH2) 50S ribosomal protein L3| Length = 209 Score = 42.7 bits (99), Expect = 0.001 Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 3/86 (3%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTR---WGVTRLPRKTHRGLRKVACIGAWHPXR 507 VP+D VF++ + ++++GVTKGKG+ GVV R G +R ++ R + G+ P R Sbjct: 97 VPVD-VFKEGDKVNVLGVTKGKGFAGVVKRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSR 155 Query: 506 VSYTVARAGQNGYHHXTXMNKKVYKI 429 AG+ G + T N + K+ Sbjct: 156 TFKGTRMAGRMGGKNKTVQNLVIVKV 181
>RL3_THEMA (P38515) 50S ribosomal protein L3| Length = 207 Score = 42.7 bits (99), Expect = 0.001 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR----KTHRGLRKVACIGAWHPXRVSYT 495 VF+K E +D+ G TKG+G+ G + RWG + P+ K HR L V P ++ Sbjct: 97 VFEKGEYVDVTGWTKGRGFAGAMKRWGFSGGPKSHGSKFHRELGSVG--QHTEPAKIWKG 154 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 G+ G T N +V I Sbjct: 155 KKMPGRYGNERVTVRNLQVVDI 176
>RL3_STRR6 (Q8CWV8) 50S ribosomal protein L3| Length = 208 Score = 42.0 bits (97), Expect = 0.002 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 1/136 (0%) Frame = -3 Query: 659 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPXRVSYTVARA 483 F +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159 Query: 482 GQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKG 303 G+ G T N +V ++ V + + ++IKG Sbjct: 160 GRMGGDRVTIQNLEVVQV-------------------------------VPEKNVILIKG 188 Query: 302 CCVGPKKRVVTLRQSL 255 G KK ++T++ ++ Sbjct: 189 NVPGAKKSLITIKSAV 204
>RL3_STRPN (Q97SV5) 50S ribosomal protein L3| Length = 208 Score = 42.0 bits (97), Expect = 0.002 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 1/136 (0%) Frame = -3 Query: 659 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPXRVSYTVARA 483 F +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159 Query: 482 GQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKG 303 G+ G T N +V ++ V + + ++IKG Sbjct: 160 GRMGGDRVTIQNLEVVQV-------------------------------VPEKNVILIKG 188 Query: 302 CCVGPKKRVVTLRQSL 255 G KK ++T++ ++ Sbjct: 189 NVPGAKKSLITIKSAV 204
>RL3_CORDI (P60453) 50S ribosomal protein L3| Length = 218 Score = 42.0 bits (97), Expect = 0.002 Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HPXRVSYTV 492 +F+ +D+ G TKGKGY G + R G R+V IGA P RV Sbjct: 105 IFEGINFVDVTGTTKGKGYAGAMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGT 164 Query: 491 ARAGQNGYHHXTXMNKKVYKI 429 AG+ G T N KV KI Sbjct: 165 RMAGRMGSDRVTTQNLKVQKI 185
>RL3_AQUAE (O66431) 50S ribosomal protein L3| Length = 241 Score = 41.6 bits (96), Expect = 0.002 Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIG 525 ++ ++ VF+ +++D+ G++KG+G+ G + RW P+ HR R V IG Sbjct: 97 QLKVEDVFKPGDLVDVWGISKGRGFAGAMKRWDFAGFPKSHGHRYHRAVGAIG 149
>RL3_LEPIN (Q9XD36) 50S ribosomal protein L3| Length = 206 Score = 40.8 bits (94), Expect = 0.004 Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 2/85 (2%) Frame = -3 Query: 671 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGA-WHPXRVSY 498 I VF +++ + GV+KG+GY+GVV R G P R R +GA P RV Sbjct: 98 IQDVFAVSDVVKVTGVSKGRGYQGVVKRHGHAGGPGAHGSRFHRHPGSMGANSTPSRVFK 157 Query: 497 TVARAGQNGYHHXTXMNKKVYKIGK 423 V G+ G T N KV +I + Sbjct: 158 GVKLPGRTGSQKTTVRNLKVVRINE 182
>RL3_LEPIC (Q72NG1) 50S ribosomal protein L3| Length = 206 Score = 40.8 bits (94), Expect = 0.004 Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 2/85 (2%) Frame = -3 Query: 671 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGA-WHPXRVSY 498 I VF +++ + GV+KG+GY+GVV R G P R R +GA P RV Sbjct: 98 IQDVFAVSDVVKVTGVSKGRGYQGVVKRHGHAGGPGAHGSRFHRHPGSMGANSTPSRVFK 157 Query: 497 TVARAGQNGYHHXTXMNKKVYKIGK 423 V G+ G T N KV +I + Sbjct: 158 GVKLPGRTGSQKTTVRNLKVVRINE 182
>RL3_THETH (P52860) 50S ribosomal protein L3| Length = 206 Score = 40.4 bits (93), Expect = 0.005 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPXRVSYTV 492 +F+ E +D+ G +KG+G+ GV+ RW P H+ R IG P RV Sbjct: 95 IFKPGERVDVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGK 154 Query: 491 ARAGQNGYHHXTXMNKKVYKI 429 AG G T MN +V + Sbjct: 155 KMAGHYGAERVTVMNLEVVDV 175
>RL3_THET8 (Q5SHN8) 50S ribosomal protein L3| Length = 206 Score = 40.4 bits (93), Expect = 0.005 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPXRVSYTV 492 +F+ E +D+ G +KG+G+ GV+ RW P H+ R IG P RV Sbjct: 95 IFKPGERVDVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGK 154 Query: 491 ARAGQNGYHHXTXMNKKVYKI 429 AG G T MN +V + Sbjct: 155 KMAGHYGAERVTVMNLEVVDV 175
>RL3_STAAW (P60450) 50S ribosomal protein L3| Length = 220 Score = 40.4 bits (93), Expect = 0.005 Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 4/148 (2%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWHP 513 EV +D F ++ID+ GV+KGKG++G + R G +R P HR V A Sbjct: 104 EVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGM--ASDA 160 Query: 512 XRVSYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGV 333 RV G+ G + T N +V ++ TE + Sbjct: 161 SRVFKGQKMPGRMGGNTVTVQNLEVVQVD---------------TENKV----------- 194 Query: 332 VKADYLMIKGCCVGPKKRVVTLRQSLLK 249 +++KG GPKK +V +R S+ K Sbjct: 195 -----ILVKGNVPGPKKGLVEIRTSIKK 217
>RL3_STAAS (Q6G771) 50S ribosomal protein L3| Length = 220 Score = 40.4 bits (93), Expect = 0.005 Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 4/148 (2%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWHP 513 EV +D F ++ID+ GV+KGKG++G + R G +R P HR V A Sbjct: 104 EVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGM--ASDA 160 Query: 512 XRVSYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGV 333 RV G+ G + T N +V ++ TE + Sbjct: 161 SRVFKGQKMPGRMGGNTVTVQNLEVVQVD---------------TENKV----------- 194 Query: 332 VKADYLMIKGCCVGPKKRVVTLRQSLLK 249 +++KG GPKK +V +R S+ K Sbjct: 195 -----ILVKGNVPGPKKGLVEIRTSIKK 217
>RL3_STAAR (Q6GEI3) 50S ribosomal protein L3| Length = 220 Score = 40.4 bits (93), Expect = 0.005 Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 4/148 (2%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWHP 513 EV +D F ++ID+ GV+KGKG++G + R G +R P HR V A Sbjct: 104 EVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGM--ASDA 160 Query: 512 XRVSYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGV 333 RV G+ G + T N +V ++ TE + Sbjct: 161 SRVFKGQKMPGRMGGNTVTVQNLEVVQVD---------------TENKV----------- 194 Query: 332 VKADYLMIKGCCVGPKKRVVTLRQSLLK 249 +++KG GPKK +V +R S+ K Sbjct: 195 -----ILVKGNVPGPKKGLVEIRTSIKK 217
>RL3_STAAN (P60449) 50S ribosomal protein L3| Length = 220 Score = 40.4 bits (93), Expect = 0.005 Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 4/148 (2%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWHP 513 EV +D F ++ID+ GV+KGKG++G + R G +R P HR V A Sbjct: 104 EVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGM--ASDA 160 Query: 512 XRVSYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGV 333 RV G+ G + T N +V ++ TE + Sbjct: 161 SRVFKGQKMPGRMGGNTVTVQNLEVVQVD---------------TENKV----------- 194 Query: 332 VKADYLMIKGCCVGPKKRVVTLRQSLLK 249 +++KG GPKK +V +R S+ K Sbjct: 195 -----ILVKGNVPGPKKGLVEIRTSIKK 217
>RL3_STAAM (P60448) 50S ribosomal protein L3| Length = 220 Score = 40.4 bits (93), Expect = 0.005 Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 4/148 (2%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWHP 513 EV +D F ++ID+ GV+KGKG++G + R G +R P HR V A Sbjct: 104 EVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGM--ASDA 160 Query: 512 XRVSYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGV 333 RV G+ G + T N +V ++ TE + Sbjct: 161 SRVFKGQKMPGRMGGNTVTVQNLEVVQVD---------------TENKV----------- 194 Query: 332 VKADYLMIKGCCVGPKKRVVTLRQSLLK 249 +++KG GPKK +V +R S+ K Sbjct: 195 -----ILVKGNVPGPKKGLVEIRTSIKK 217
>RL3_GEOSL (P60454) 50S ribosomal protein L3| Length = 210 Score = 40.4 bits (93), Expect = 0.005 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 3/80 (3%) Frame = -3 Query: 659 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIG-AWHPXRVSYTVA 489 F+ E ID+ G + GKG++GV+ RWG R R +H R IG + +P RV Sbjct: 102 FEVGEYIDVTGTSIGKGFQGVIKRWGF-RGGRSSHGSCFHRAPGSIGSSAYPSRVFKNKK 160 Query: 488 RAGQNGYHHXTXMNKKVYKI 429 GQ G T +V ++ Sbjct: 161 MPGQLGNERVTVQRLQVVRV 180
>RL3_STAAC (Q5HDV8) 50S ribosomal protein L3| Length = 209 Score = 40.4 bits (93), Expect = 0.005 Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 4/148 (2%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWHP 513 EV +D F ++ID+ GV+KGKG++G + R G +R P HR V A Sbjct: 93 EVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGM--ASDA 149 Query: 512 XRVSYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGV 333 RV G+ G + T N +V ++ TE + Sbjct: 150 SRVFKGQKMPGRMGGNTVTVQNLEVVQVD---------------TENKV----------- 183 Query: 332 VKADYLMIKGCCVGPKKRVVTLRQSLLK 249 +++KG GPKK +V +R S+ K Sbjct: 184 -----ILVKGNVPGPKKGLVEIRTSIKK 206
>RL3_CORGL (Q8NT09) 50S ribosomal protein L3| Length = 218 Score = 40.0 bits (92), Expect = 0.007 Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHPXRVSYTV 492 +F + +D+ G TKGKGY G + R G R+V IG A P R+ Sbjct: 105 IFNDIKFVDVTGTTKGKGYAGAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGK 164 Query: 491 ARAGQNGYHHXTXMNKKVYKI 429 AG+ G T N KV KI Sbjct: 165 RMAGRMGNDRVTTQNLKVQKI 185
>RL3_DEIRA (Q9RXK2) 50S ribosomal protein L3| Length = 211 Score = 39.7 bits (91), Expect = 0.009 Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 10/88 (11%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHR-----GLRKVACIGAWHP 513 +F + E ID G +KGKG +GV+ RW P +K HR G RK P Sbjct: 95 IFAEGEKIDATGTSKGKGTQGVMKRWNFAGGPASHGSKKWHRRPGSIGQRKT-------P 147 Query: 512 XRVSYTVARAGQNGYHHXTXMNKKVYKI 429 RV AG G T N +V +I Sbjct: 148 GRVYKGKRMAGHMGMERVTVQNLEVVEI 175
>RL3_NEIMB (P60444) 50S ribosomal protein L3| Length = 214 Score = 39.3 bits (90), Expect = 0.011 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%) Frame = -3 Query: 665 AVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPXRVSYT 495 ++F+ +++D+ G +KGKG+ G + R +G R R R IG A P RV Sbjct: 102 SMFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPG 161 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 AGQ G T +V ++ Sbjct: 162 KRMAGQYGNTKATVQKLEVVRV 183
>RL3_NEIMA (P60443) 50S ribosomal protein L3| Length = 214 Score = 39.3 bits (90), Expect = 0.011 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%) Frame = -3 Query: 665 AVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPXRVSYT 495 ++F+ +++D+ G +KGKG+ G + R +G R R R IG A P RV Sbjct: 102 SMFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPG 161 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 AGQ G T +V ++ Sbjct: 162 KRMAGQYGNTKATVQKLEVVRV 183
>RUVB_LISMO (Q8Y6Z8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 335 Score = 39.3 bits (90), Expect = 0.011 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 8/118 (6%) Frame = +3 Query: 72 VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 227 + H+ F +++T+++LR+S+ L+ I+ L G E A P++ + K DF Sbjct: 177 IDHLEFYTEEQLTEIVLRTSNILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233 Query: 228 QCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 401 Q G + + LA+ TLL D LD L HTI+ ++ G V L + S G Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290
>RUVB_LISMF (Q71ZD8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 335 Score = 39.3 bits (90), Expect = 0.011 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 8/118 (6%) Frame = +3 Query: 72 VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 227 + H+ F +++T+++LR+S+ L+ I+ L G E A P++ + K DF Sbjct: 177 IDHLEFYTEEQLTEIVLRTSNILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233 Query: 228 QCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 401 Q G + + LA+ TLL D LD L HTI+ ++ G V L + S G Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290
>RUVB_LISIN (Q92BI2) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 335 Score = 38.9 bits (89), Expect = 0.015 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 8/118 (6%) Frame = +3 Query: 72 VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 227 + H+ F +++T+++LR+S L+ I+ L G E A P++ + K DF Sbjct: 177 IDHLEFYTEEQLTEIVLRTSGILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233 Query: 228 QCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 401 Q G + + LA+ TLL D LD L HTI+ ++ G V L + S G Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290
>RL3_MYCCT (P10134) 50S ribosomal protein L3| Length = 223 Score = 38.9 bits (89), Expect = 0.015 Identities = 33/155 (21%), Positives = 60/155 (38%), Gaps = 4/155 (2%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWHPX 510 + + +F E +D+ G++KGKG+ G + R +R P HRG+ + I Sbjct: 94 INVSDIFVSGEYVDVTGISKGKGFAGGIKRHNYSRGPMAHGSGYHRGIGSMGAI----IN 149 Query: 509 RVSYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 330 R+ + G G T N ++ I + Sbjct: 150 RIFKSKKMPGHMGNAKRTIQNLEIIAIDQ------------------------------- 178 Query: 329 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALE 225 + ++IKG GPK V ++Q++ +S+ A+E Sbjct: 179 SNNIMLIKGSIPGPKNSFVQIKQNVKGMSSKQAVE 213
>RM03_BOVIN (Q3ZBX6) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)| Length = 348 Score = 38.9 bits (89), Expect = 0.015 Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%) Frame = -3 Query: 665 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPXRVS 501 A F+ + +D+ T GKG++GV+ RWG P KTH R+ I RV Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTH---RRPGAISTGDVARVW 252 Query: 500 YTVARAGQNGYHHXTXMNKKVYKI 429 GQ G T KV++I Sbjct: 253 PGTKMPGQLGNVDRTAFGLKVWRI 276
>RL3_VIBPA (Q87T13) 50S ribosomal protein L3| Length = 209 Score = 38.5 bits (88), Expect = 0.019 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PXRVSYT 495 +F + + +D+ G +KGKG++G V RW R TH R IG P RV Sbjct: 100 LFNETKKVDVTGTSKGKGFQGAVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 AG G T N ++ ++ Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180
>RL3_COREF (Q8FS80) 50S ribosomal protein L3| Length = 218 Score = 38.5 bits (88), Expect = 0.019 Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHPXRVSYTV 492 +F + +D+ G +KGKGY G + R G R+V IG A P R+ Sbjct: 105 IFNDVKFVDVTGTSKGKGYAGAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGK 164 Query: 491 ARAGQNGYHHXTXMNKKVYKI 429 AG+ G T N KV KI Sbjct: 165 RMAGRMGNDRVTTQNLKVQKI 185
>RL3_BUCBP (Q89A68) 50S ribosomal protein L3| Length = 214 Score = 38.1 bits (87), Expect = 0.025 Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPXRVSYTV 492 +F + +DIIG +KGKG+ G V RW L R IG P RV Sbjct: 102 LFSNIKKVDIIGTSKGKGFCGTVKRWNFHTQDATHGNSLSHRAPGSIGQNQTPGRVFKGK 161 Query: 491 ARAGQNGYHHXTXMNKKVYKI 429 AG G H T N + KI Sbjct: 162 KMAGHLGNHRVTVQNLDIVKI 182
>RM03_RAT (P18665) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)| Length = 347 Score = 38.1 bits (87), Expect = 0.025 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 5/84 (5%) Frame = -3 Query: 665 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPXRVS 501 A F+ + +D+ T GKG++GV+ RWG P KTH R+ I RV Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPASHGQTKTH---RRPGAISTGDIARVW 252 Query: 500 YTVARAGQNGYHHXTXMNKKVYKI 429 G+ G + T KV+++ Sbjct: 253 PGTKMPGKMGNQNRTVYGLKVWRV 276
>RL3_STAHJ (Q4L8B4) 50S ribosomal protein L3| Length = 220 Score = 38.1 bits (87), Expect = 0.025 Identities = 38/148 (25%), Positives = 60/148 (40%), Gaps = 4/148 (2%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHP 513 EV +D F+ ++ID+ G +KGKG++G + R G R P HR V A Sbjct: 104 EVTVDT-FEAGDIIDVTGTSKGKGFQGAIKRHGQARGPMAHGSHFHRAPGSVGM--ASDA 160 Query: 512 XRVSYTVARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGV 333 RV G+ G + T N +V ++ TE ++ Sbjct: 161 SRVFKGQKMPGRMGGNTVTVQNLEVVQVD---------------TENNV----------- 194 Query: 332 VKADYLMIKGCCVGPKKRVVTLRQSLLK 249 +++KG GPKK V ++ S+ K Sbjct: 195 -----ILVKGNVPGPKKGFVEIQTSIKK 217
>RM03_MOUSE (Q99N95) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)| Length = 348 Score = 38.1 bits (87), Expect = 0.025 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 5/84 (5%) Frame = -3 Query: 665 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPXRVS 501 A F+ + +D+ T GKG++GV+ RWG P KTH R+ I RV Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPASHGQTKTH---RRPGAISTGDIARVW 252 Query: 500 YTVARAGQNGYHHXTXMNKKVYKI 429 G+ G + T KV+++ Sbjct: 253 PGTKMPGRMGNQNRTVYGLKVWRV 276
>RL3_CHLCV (Q824Q1) 50S ribosomal protein L3| Length = 221 Score = 37.7 bits (86), Expect = 0.033 Identities = 38/137 (27%), Positives = 54/137 (39%), Gaps = 2/137 (1%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PXRVSYTVA 489 V + +DI GV+KGKG++GV+ R+G P+ G R IG P R Sbjct: 111 VLEDISSVDISGVSKGKGFQGVMKRFGFRGGPKTHGSGFHRHAGSIGMRSTPGRCFPGSK 170 Query: 488 RAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 309 R G + T N +V KI EK + L++ Sbjct: 171 RPSHMGTVNVTVKNLEVVKID---------------LEKKV----------------LLV 199 Query: 308 KGCCVGPKKRVVTLRQS 258 KG GP+ VV +R+S Sbjct: 200 KGAIPGPRGSVVVIRRS 216
>RL3_VIBVY (Q7MPI8) 50S ribosomal protein L3| Length = 209 Score = 37.7 bits (86), Expect = 0.033 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PXRVSYT 495 +F + + +D+ G +KGKG++G V RW R TH R IG P RV Sbjct: 100 LFNEVKKVDVTGTSKGKGFQGTVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 AG G T N ++ ++ Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180
>RL3_VIBVU (Q8DE39) 50S ribosomal protein L3| Length = 209 Score = 37.7 bits (86), Expect = 0.033 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PXRVSYT 495 +F + + +D+ G +KGKG++G V RW R TH R IG P RV Sbjct: 100 LFNEVKKVDVTGTSKGKGFQGTVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 AG G T N ++ ++ Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180
>RL3_VIBCH (Q9KNY4) 50S ribosomal protein L3| Length = 209 Score = 37.7 bits (86), Expect = 0.033 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PXRVSYT 495 +F + + +D+ G +KGKG++G V RW R TH R IG P RV Sbjct: 100 LFNEVKKVDVTGTSKGKGFQGAVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 AG G T N ++ ++ Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180
>RL3_BUCAP (Q8K950) 50S ribosomal protein L3| Length = 209 Score = 37.7 bits (86), Expect = 0.033 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPXRVSYT 495 +F + +D+ G++KGKG+ G V RW R TH R IG P RV Sbjct: 100 IFNDIKKVDVTGISKGKGFSGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGRVFKG 158 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 AG G + T N + KI Sbjct: 159 KKMAGHLGNNRVTVQNLNIVKI 180
>RL3_TREPA (O83219) 50S ribosomal protein L3| Length = 208 Score = 37.4 bits (85), Expect = 0.043 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH--RGLRKVACIG-AWHPXRVSYTV 492 V + +D+ ++KGKG++GVV RWG + R +H + R+ G P R V Sbjct: 98 VLESVRYLDVCALSKGKGFQGVVKRWGFSG-GRSSHGSKFHREAGSTGQCTSPGRTFKNV 156 Query: 491 ARAGQNGYHHXTXMNKKVYKI 429 G+ G T N ++ +I Sbjct: 157 KMPGRMGAERVTVQNLRIERI 177
>RL3_STAES (Q8CRG0) 50S ribosomal protein L3| Length = 220 Score = 37.4 bits (85), Expect = 0.043 Identities = 17/38 (44%), Positives = 26/38 (68%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 567 EV +D F+ ++ID+ GV+KGKG++G + R G R P Sbjct: 104 EVSVDT-FETGDIIDVTGVSKGKGFQGAIKRHGQGRGP 140
>RL3_STAEQ (Q5HLZ9) 50S ribosomal protein L3| Length = 220 Score = 37.4 bits (85), Expect = 0.043 Identities = 17/38 (44%), Positives = 26/38 (68%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 567 EV +D F+ ++ID+ GV+KGKG++G + R G R P Sbjct: 104 EVSVDT-FETGDIIDVTGVSKGKGFQGAIKRHGQGRGP 140
>RK3B_ARATH (Q9LRN8) 50S ribosomal protein L3-2, chloroplast precursor| Length = 324 Score = 37.0 bits (84), Expect = 0.056 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 5/82 (6%) Frame = -3 Query: 659 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-----THRGLRKVACIGAWHPXRVSYT 495 F + +D+ G+T+GKG++G + R G + +P +HR A P +V Sbjct: 176 FVPGQYVDVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDA--PGKVFKG 233 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 AG+ G T N VYKI Sbjct: 234 RKMAGRMGADQRTVKNVWVYKI 255
>RM03_HUMAN (P09001) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)| Length = 348 Score = 37.0 bits (84), Expect = 0.056 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 5/84 (5%) Frame = -3 Query: 665 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPXRVS 501 A F+ + +D+ T GKG++GV+ RWG P KTH R+ + RV Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTH---RRPGAVATGDIGRVW 252 Query: 500 YTVARAGQNGYHHXTXMNKKVYKI 429 G+ G + T KV++I Sbjct: 253 PGTKMPGKMGNIYRTEYGLKVWRI 276
>RM09_YEAST (P31334) 60S ribosomal protein L9, mitochondrial precursor (YmL9)| Length = 269 Score = 36.6 bits (83), Expect = 0.073 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%) Frame = -3 Query: 659 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW----HPXRVSYTV 492 F++ + +D+ V+KGKG+ GV+ R+G L R +H G++ P RV Sbjct: 160 FKEGQYVDVRSVSKGKGFTGVMKRYGFKGL-RASHGTSIMHRHGGSYGQNQDPGRVLPGR 218 Query: 491 ARAGQNGYHHXTXMNKKVYKI 429 G G H T N KV K+ Sbjct: 219 KMPGHMGNEHVTIQNVKVLKV 239
>RL3_FUSNN (Q8RIF5) 50S ribosomal protein L3| Length = 211 Score = 36.6 bits (83), Expect = 0.073 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 4/88 (4%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG--AWHP 513 E+ +D V + +DI G +KGKG GV+ + G + R R R IG +W P Sbjct: 94 EIKVD-VLTEVGYVDITGTSKGKGTSGVMKKHGFSGNRASHGVSRNHRLGGSIGMSSW-P 151 Query: 512 XRVSYTVARAGQNGYHHXTXMNKKVYKI 429 +V AGQ+G T N KV K+ Sbjct: 152 GKVLKGKKMAGQHGNATVTVQNLKVVKV 179
>RL3_MYCGA (O52332) 50S ribosomal protein L3| Length = 236 Score = 36.6 bits (83), Expect = 0.073 Identities = 22/77 (28%), Positives = 39/77 (50%) Frame = -3 Query: 671 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVSYTV 492 ++ +FQ+ +++D+ TKG+G+ G + RW ++ K H GA +P R +V Sbjct: 96 VEELFQEGQVVDVQARTKGRGFTGAIKRWNF-KIGSKGH---------GAGYPHRFQGSV 145 Query: 491 ARAGQNGYHHXTXMNKK 441 +AG+ G M K Sbjct: 146 -QAGRGGSQAQRVMKGK 161
>RL3_PSEAE (Q9HWD5) 50S ribosomal protein L3| Length = 211 Score = 36.2 bits (82), Expect = 0.095 Identities = 13/32 (40%), Positives = 23/32 (71%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 585 ++ +D +FQ +M+D+ G +KGKG+ G + RW Sbjct: 95 QITVD-LFQAGQMVDVTGESKGKGFAGTIKRW 125
>RL3_MYCTU (P60442) 50S ribosomal protein L3| Length = 217 Score = 35.8 bits (81), Expect = 0.12 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 5/83 (6%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPXRVSY 498 +F +D+ G +KGKG+ G + R G + + HR R + G P RV Sbjct: 105 IFADGSYVDVTGTSKGKGFAGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPARVFK 162 Query: 497 TVARAGQNGYHHXTXMNKKVYKI 429 AG+ G T +N V+K+ Sbjct: 163 GTRMAGRMGNDRVTVLNLLVHKV 185
>RL3_MYCBO (P60441) 50S ribosomal protein L3| Length = 217 Score = 35.8 bits (81), Expect = 0.12 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 5/83 (6%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPXRVSY 498 +F +D+ G +KGKG+ G + R G + + HR R + G P RV Sbjct: 105 IFADGSYVDVTGTSKGKGFAGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPARVFK 162 Query: 497 TVARAGQNGYHHXTXMNKKVYKI 429 AG+ G T +N V+K+ Sbjct: 163 GTRMAGRMGNDRVTVLNLLVHKV 185
>RL3_COXBU (Q83ES4) 50S ribosomal protein L3| Length = 217 Score = 35.8 bits (81), Expect = 0.12 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-P 513 E+ +D +F++ +++D+ G+T+GKG+ G V R R TH R IG P Sbjct: 98 ELKVD-IFKEGQVVDVRGLTRGKGFAGTVKRHNF-RTQDATHGNSLSHRAPGSIGQCQTP 155 Query: 512 XRVSYTVARAGQNGYHHXTXMNKKVYKI 429 RV AGQ G + T ++++ K+ Sbjct: 156 GRVWKGKKMAGQLGNVYCTVQSQEIIKV 183
>RL3_HAEIN (P44344) 50S ribosomal protein L3| Length = 208 Score = 35.4 bits (80), Expect = 0.16 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHP 513 E+ +D +F + +D+ G +KGKG++G V RW R TH +G+ P Sbjct: 94 EINVD-IFADVKKVDVTGTSKGKGFQGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQTP 151 Query: 512 XRVSYTVARAGQNGYHHXTXMNKKVYKI 429 RV AG G T + +V ++ Sbjct: 152 GRVFKGKKMAGHLGAERVTVQSLEVVRV 179
>RL3_LACLA (Q9CDW2) 50S ribosomal protein L3| Length = 207 Score = 35.4 bits (80), Expect = 0.16 Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 1/85 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPXRV 504 E+ +D F +++D+ G +KGKG++G + R G +R P R R+ +G +V Sbjct: 94 EITVDT-FAAGDVVDVTGTSKGKGFQGPIKRHGQSRGPMAHGSRYHRRPGSMGPVAANKV 152 Query: 503 SYTVARAGQNGYHHXTXMNKKVYKI 429 AG+ G T N + ++ Sbjct: 153 PKGKKLAGRMGNKRVTVQNLVIAQV 177
>RK3A_ARATH (Q9SKX4) 50S ribosomal protein L3-1, chloroplast precursor| Length = 271 Score = 35.4 bits (80), Expect = 0.16 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 4/86 (4%) Frame = -3 Query: 668 DAVFQKDEMIDIIGVTKGKGYEGVVTRW----GVTRLPRKTHRGLRKVACIGAWHPXRVS 501 D +F++ +++D+ G T GKG++G + R G K+HR L + P RV Sbjct: 154 DEIFKEGDLVDVAGTTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIG--AGTTPGRVY 211 Query: 500 YTVARAGQNGYHHXTXMNKKVYKIGK 423 G+ G K+ K+ K Sbjct: 212 KGKKMPGRMGGTRTKIRKLKIVKVDK 237
>RL3_ACTAC (P94799) 50S ribosomal protein L3 (Fragment)| Length = 121 Score = 35.4 bits (80), Expect = 0.16 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHP 513 E+ +D +F + +D+ G +KGKG++G V RW R TH +G+ P Sbjct: 7 EINVD-IFADVKKVDVTGTSKGKGFQGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQTP 64 Query: 512 XRVSYTVARAGQNGYHHXTXMNKKVYKI 429 RV AG G T + +V ++ Sbjct: 65 GRVFKGKKMAGHLGNERVTVQSLEVVRV 92
>RL3_CHLPN (Q9Z7Q7) 50S ribosomal protein L3| Length = 219 Score = 35.0 bits (79), Expect = 0.21 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PXRVSYTVA 489 VF+ +D+ G++KGKG++GV+ ++G P G R IG P R Sbjct: 111 VFEDVSSVDVRGISKGKGFQGVMKKFGFRGGPGSHGSGFHRHAGSIGMRSTPGRCFPGSK 170 Query: 488 RAGQNGYHHXTXMNKKVYKI 429 R G + T N +V K+ Sbjct: 171 RPSHMGAENVTVKNLEVIKV 190
>RL3_BLOFL (Q7VQE8) 50S ribosomal protein L3| Length = 219 Score = 35.0 bits (79), Expect = 0.21 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 3/74 (4%) Frame = -3 Query: 641 IDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPXRVSYTVARAGQNG 471 +D+ G++KGKG+ G V RW L R IG P +V AG G Sbjct: 108 VDVTGISKGKGFAGAVKRWNFRTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHLG 167 Query: 470 YHHXTXMNKKVYKI 429 Y T N V I Sbjct: 168 YEKATIQNLAVINI 181
>RL3_BORPE (Q7VTD3) 50S ribosomal protein L3| Length = 233 Score = 35.0 bits (79), Expect = 0.21 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 3/86 (3%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPXR 507 + +++VF+ + +D+ G + GKG+ G + R +G R R R IG A P R Sbjct: 113 IAVESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGR 172 Query: 506 VSYTVARAGQNGYHHXTXMNKKVYKI 429 + +G G T N V ++ Sbjct: 173 IFPGKRMSGHMGDVTRTVQNLDVVRV 198
>RL3_BORPA (Q7W2F6) 50S ribosomal protein L3| Length = 233 Score = 35.0 bits (79), Expect = 0.21 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 3/86 (3%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPXR 507 + +++VF+ + +D+ G + GKG+ G + R +G R R R IG A P R Sbjct: 113 IAVESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGR 172 Query: 506 VSYTVARAGQNGYHHXTXMNKKVYKI 429 + +G G T N V ++ Sbjct: 173 IFPGKRMSGHMGDVTRTVQNLDVVRV 198
>RL3_BORBR (Q7WRC5) 50S ribosomal protein L3| Length = 233 Score = 35.0 bits (79), Expect = 0.21 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 3/86 (3%) Frame = -3 Query: 677 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPXR 507 + +++VF+ + +D+ G + GKG+ G + R +G R R R IG A P R Sbjct: 113 IAVESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGR 172 Query: 506 VSYTVARAGQNGYHHXTXMNKKVYKI 429 + +G G T N V ++ Sbjct: 173 IFPGKRMSGHMGDVTRTVQNLDVVRV 198
>RL3_WOLSU (Q7M8D4) 50S ribosomal protein L3| Length = 192 Score = 34.7 bits (78), Expect = 0.28 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Frame = -3 Query: 623 TKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIG--AWHPXRVSYTVARAGQNGYHHXTX 453 TKG+G+ GV+ RW P HR R+ IG W P RV AGQ G T Sbjct: 100 TKGRGFTGVMKRWNFAGGPAAHGHRFKRRTGSIGNREW-PGRVQPGKKMAGQYGNEKVTV 158 Query: 452 MNKKV 438 N+ V Sbjct: 159 QNEIV 163
>RL3_MYCLE (P30762) 50S ribosomal protein L3| Length = 217 Score = 34.7 bits (78), Expect = 0.28 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 5/83 (6%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPXRVSY 498 +F +D+ G +KGKG+ G + R G + + HR R + G P RV Sbjct: 105 IFADATYVDVTGTSKGKGFSGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPARVFK 162 Query: 497 TVARAGQNGYHHXTXMNKKVYKI 429 AG+ G T N V+K+ Sbjct: 163 GTRMAGRMGNDRVTVQNLLVHKV 185
>RL3_CHLMU (Q9PJL4) 50S ribosomal protein L3| Length = 221 Score = 34.7 bits (78), Expect = 0.28 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PXRVSYTVA 489 +F +D+ G++KGKG++GV+ ++G P+ G R IG P R Sbjct: 111 IFDGVSNVDVCGISKGKGFQGVMKKFGFRGGPKSHGSGFHRHAGSIGMRSTPGRCFPGSK 170 Query: 488 RAGQNGYHHXTXMNKKVYKI 429 R G T N +V K+ Sbjct: 171 RPSHMGCDRVTVKNLEVVKV 190
>RL3_XANCP (Q8PC49) 50S ribosomal protein L3| Length = 216 Score = 34.7 bits (78), Expect = 0.28 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPXRVSYT 495 +F+ + +D+ GVTKGKG++G + R+ R+ TH G+ P RV Sbjct: 107 IFEVGQKVDVQGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPG 165 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 +G G + N +V K+ Sbjct: 166 KKMSGHMGAVQQSTQNLEVVKV 187
>RL3_XANAC (Q8PNS4) 50S ribosomal protein L3| Length = 216 Score = 34.7 bits (78), Expect = 0.28 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPXRVSYT 495 +F+ + +D+ GVTKGKG++G + R+ R+ TH G+ P RV Sbjct: 107 IFEVGQKVDVQGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPG 165 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 +G G + N +V K+ Sbjct: 166 KKMSGHMGAVQQSTQNLEVVKV 187
>RL3_BORBU (P94267) 50S ribosomal protein L3| Length = 206 Score = 34.7 bits (78), Expect = 0.28 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHP 513 E+ +D VF+ + +D+ G TKGKG++G + R + P K HR L A P Sbjct: 94 EIKVD-VFKSVKYVDVTGTTKGKGFQGAMKRHNFSGGPSSHGSKFHRHLGGTG--QATTP 150 Query: 512 XRVSYTVARAGQNGYHHXTXMNKKVYKI 429 R AG+ + T N +V I Sbjct: 151 ARTFKGTKMAGRMAGNQQTIQNLEVVLI 178
>RL3_BUCAI (P57591) 50S ribosomal protein L3| Length = 209 Score = 34.7 bits (78), Expect = 0.28 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRW 585 +F + +DI G++KGKG+ G V RW Sbjct: 100 IFNNVKKVDITGISKGKGFSGTVKRW 125
>RL3_PSESM (Q889X1) 50S ribosomal protein L3| Length = 211 Score = 34.3 bits (77), Expect = 0.36 Identities = 10/26 (38%), Positives = 19/26 (73%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRW 585 +F +++D+ G +KGKG++G + RW Sbjct: 100 IFAAGQLVDVTGQSKGKGFQGTIKRW 125
>RL3_CHLTR (O84533) 50S ribosomal protein L3| Length = 221 Score = 34.3 bits (77), Expect = 0.36 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 2/80 (2%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH--PXRVSYTVA 489 +F +DI G++KGKG++GV+ ++G P+ G + A P R Sbjct: 111 IFDGVSNVDICGISKGKGFQGVMKKFGFRGGPKSHGSGFHRHAGSTGMRSTPGRCFPGSK 170 Query: 488 RAGQNGYHHXTXMNKKVYKI 429 R G T N +V K+ Sbjct: 171 RPSHMGCDRVTVKNLEVVKV 190
>RL3_HAEDU (Q7VKD2) 50S ribosomal protein L3| Length = 208 Score = 34.3 bits (77), Expect = 0.36 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 4/88 (4%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHP 513 E+ +D +F + +D+ G +KGKG+ G V RW R TH +G+ P Sbjct: 94 EINVD-IFADVKKVDVTGTSKGKGFAGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQTP 151 Query: 512 XRVSYTVARAGQNGYHHXTXMNKKVYKI 429 RV AG G T + +V ++ Sbjct: 152 GRVFKGKKMAGHLGAERVTVQSLEVVRV 179
>RL3_PASMU (Q9CL32) 50S ribosomal protein L3| Length = 209 Score = 34.3 bits (77), Expect = 0.36 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 4/88 (4%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHP 513 E+ +D +F + +D+ G +KGKG+ G V RW R TH +G+ P Sbjct: 95 EINVD-IFADVKKVDVTGTSKGKGFAGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQTP 152 Query: 512 XRVSYTVARAGQNGYHHXTXMNKKVYKI 429 RV AG G T + +V ++ Sbjct: 153 GRVFKGKKMAGHLGNERVTVQSLEVVRV 180
>RL3_LACPL (Q88XY6) 50S ribosomal protein L3| Length = 209 Score = 34.3 bits (77), Expect = 0.36 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPXRV 504 EV D +F + +D+ G+TKG GY+G + + G +R P R R+ +GA RV Sbjct: 97 EVKAD-IFAAGDAVDVTGITKGHGYQGNIHKDGQSRGPMAHGSRYHRRPGSMGA-IINRV 154 Query: 503 SYTVARAGQNGYHHXTXMNKKVYK 432 G+ G H T N ++ + Sbjct: 155 FKGKKLPGRMGNHQRTMQNLQIVR 178
>RL3_BRAPL (Q9FA04) 50S ribosomal protein L3| Length = 218 Score = 34.3 bits (77), Expect = 0.36 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 2/86 (2%) Frame = -3 Query: 680 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA-CIGA-WHPXR 507 E+ +D +FQ + ID+ ++KG+G+ GV+ R P R+ A IG +P R Sbjct: 95 ELKVD-IFQAGDFIDVSSLSKGRGFAGVMKRHNYDGGPMSHGSNFRRRAGSIGCNSYPAR 153 Query: 506 VSYTVARAGQNGYHHXTXMNKKVYKI 429 V G G T N KV +I Sbjct: 154 VWKGKGMPGHMGNTLTTIQNLKVVEI 179
>RL3_STAS1 (Q49ZG8) 50S ribosomal protein L3| Length = 219 Score = 33.9 bits (76), Expect = 0.47 Identities = 13/31 (41%), Positives = 21/31 (67%) Frame = -3 Query: 659 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 567 F+ ++ID+ GV+KGKG++G + R R P Sbjct: 110 FEAGDVIDVTGVSKGKGFQGAIKRHNQARGP 140
>RL3_STRAW (Q82DP5) 50S ribosomal protein L3| Length = 214 Score = 33.9 bits (76), Expect = 0.47 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 5/82 (6%) Frame = -3 Query: 659 FQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPXRVSYT 495 F+ +D+ G +KGKG+ GV+ R G ++ HR + G P RV Sbjct: 105 FEAGVKVDVTGKSKGKGFAGVMKRHNFKGLGAGHGTQRKHRSPGSIG--GCATPGRVFKG 162 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 + AG+ G T N V+ + Sbjct: 163 LRMAGRMGNERVTTQNLTVHAV 184
>RL3_CHRVO (Q7NQF2) 50S ribosomal protein L3| Length = 214 Score = 33.9 bits (76), Expect = 0.47 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPXRVSYTV 492 +F +++D+ G +KGKG+ GV+ R + R R IG A P RV Sbjct: 103 IFTVGQLVDVTGTSKGKGFSGVIKRHNFSSNRASHGNSRSHNTPGSIGQAQDPGRVFPGK 162 Query: 491 ARAGQNGYHHXTXMNKKVYKI 429 AGQ G T ++ ++ Sbjct: 163 RMAGQYGNVKSTVQCLEIVRV 183
>RL3_MYCPE (Q8EUB3) 50S ribosomal protein L3| Length = 310 Score = 33.9 bits (76), Expect = 0.47 Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 3/153 (1%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRV--SYTVA 489 +F + +D +TKGKG+ G + RW P GA +P R S + Sbjct: 98 IFNSGDKVDAQAITKGKGFTGAIKRWNFKVGPLGH----------GAGYPHRYQGSISFG 147 Query: 488 RAGQNGYHHXTXMNKKVYKIGKV-GQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLM 312 R G G ++V K K+ G H+ T + T I ++ + ++ Sbjct: 148 RGGSQG--------QRVPKGQKMSGHYGHELVTISNLTVVSIE----------LEKNLIL 189 Query: 311 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 213 +KG GP +V L+ ++ S+ ++ IKL Sbjct: 190 VKGSVPGPVNSLVLLKTTV---KSKKQVDPIKL 219
>RL3_CAUCR (Q9A8V3) 50S ribosomal protein L3| Length = 255 Score = 33.5 bits (75), Expect = 0.61 Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 4/81 (4%) Frame = -3 Query: 659 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR---GLRKVACIG-AWHPXRVSYTV 492 F + +DI GVT GKG+ G + RW L R TH R G P R Sbjct: 107 FVAGQKVDIQGVTVGKGFAGAMKRWNFGGL-RATHGVSVSHRSHGSTGNRQDPGRTFPGK 165 Query: 491 ARAGQNGYHHXTXMNKKVYKI 429 AG G T +N V+K+ Sbjct: 166 KMAGHLGQETVTTLNVTVWKV 186
>RL3_MYCPN (P75580) 50S ribosomal protein L3| Length = 287 Score = 33.5 bits (75), Expect = 0.61 Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 1/139 (0%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVSYTVARA 483 +FQ E +D+ ++KG+G+ G + RW P GA +P R +V +A Sbjct: 101 LFQVGEYVDVSAISKGRGFTGAIKRWNFKIGPLGH----------GAGYPHRFQGSV-QA 149 Query: 482 GQNGYHHXTXMNKKVYKIGKV-GQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 306 G+ G ++V+K K+ G H+ T + + GF ++ +++ Sbjct: 150 GRGG-----ASAQRVFKGKKMSGHYGHEKVTVQN------LRIVGFDEANML----VLVS 194 Query: 305 GCCVGPKKRVVTLRQSLLK 249 G GP+ VV +R + K Sbjct: 195 GAIAGPEGGVVLIRTAKKK 213
>RM03_CAEEL (P49404) Putative mitochondrial 39S ribosomal protein L3| Length = 403 Score = 33.5 bits (75), Expect = 0.61 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Frame = -3 Query: 674 PIDAV-FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPXRVS 501 P+DA F + + G T G++G + RWG+ P R+T + R++ +G+ R+ Sbjct: 212 PLDARHFGVGQYVTATGKTIDWGFQGGMHRWGMRGQPTRRTTKSHRRIGSVGSVGDARIW 271 Query: 500 YTVARAGQNGYHHXTXMNKKVYKI 429 G GY T ++ +I Sbjct: 272 PGKRMPGHMGYEWRTVSGLEIVRI 295
>RL3_ONYPE (P60455) 50S ribosomal protein L3| Length = 157 Score = 32.7 bits (73), Expect = 1.0 Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 1/141 (0%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPXRVSYTVAR- 486 +FQ +++D+ G +KGKG+ G + R +R P G R G+ P + + Sbjct: 42 LFQVGDLVDVTGTSKGKGFAGSIKRHNQSRGPES--HGSRYHRRPGSMGPIKGKLKGKKL 99 Query: 485 AGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 306 G G+ T N + + TEK++ +IK Sbjct: 100 PGHMGHETVTIQNLAILSVD---------------TEKNL----------------FLIK 128 Query: 305 GCCVGPKKRVVTLRQSLLKQT 243 G GP K V ++ ++ K T Sbjct: 129 GNVPGPNKGFVIIKSAVKKLT 149
>RL3_SHEON (Q8EK68) 50S ribosomal protein L3| Length = 212 Score = 32.3 bits (72), Expect = 1.4 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 4/82 (4%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPXRVSYT 495 +F +D+ G +KGKG++G V RW R TH R IG P RV Sbjct: 103 IFADVAKVDVTGQSKGKGFQGGVKRWNF-RTQDMTHGNSLSHRSNGSIGQNQTPGRVFKG 161 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 +G G T N V ++ Sbjct: 162 KKMSGHMGAERVTTQNLDVVRV 183
>RL3_PSEPK (Q88QN5) 50S ribosomal protein L3| Length = 211 Score = 32.3 bits (72), Expect = 1.4 Identities = 10/26 (38%), Positives = 18/26 (69%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRW 585 +F +++D+ G +KGKG+ G + RW Sbjct: 100 LFTAGQLVDVTGQSKGKGFAGTIKRW 125
>RL3_XYLFA (Q9PE76) 50S ribosomal protein L3| Length = 215 Score = 32.3 bits (72), Expect = 1.4 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 4/83 (4%) Frame = -3 Query: 665 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPXRVSY 498 ++F + +DI G+TKGKG++G + R R+ TH G+ P RV Sbjct: 105 SIFAVGQKVDIQGITKGKGFQGTIKRHNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFP 163 Query: 497 TVARAGQNGYHHXTXMNKKVYKI 429 +G G + N +V KI Sbjct: 164 GKKMSGHMGAVRQSVQNLEVVKI 186
>RL3_STRCO (Q9L0E0) 50S ribosomal protein L3| Length = 214 Score = 32.3 bits (72), Expect = 1.4 Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 3/80 (3%) Frame = -3 Query: 659 FQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HPXRVSYTVA 489 F+ +D+ +KGKG+ GV+ R + HR R IG P RV + Sbjct: 105 FESGVKVDVTAKSKGKGFAGVMKRHNFKGGKASHGAHRVHRMPGSIGGCATPGRVFKGMR 164 Query: 488 RAGQNGYHHXTXMNKKVYKI 429 AG+ G T N V+ + Sbjct: 165 MAGRMGNERVTTQNLTVHAV 184
>RL3_SHIFL (P60447) 50S ribosomal protein L3| Length = 209 Score = 32.3 bits (72), Expect = 1.4 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPXRVSYT 495 +F + +D+ G +KGKG+ G V RW R TH R IG P +V Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 AGQ G T + V ++ Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180
>RL3_SALTY (P60446) 50S ribosomal protein L3| Length = 209 Score = 32.3 bits (72), Expect = 1.4 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPXRVSYT 495 +F + +D+ G +KGKG+ G V RW R TH R IG P +V Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 AGQ G T + V ++ Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180
>RL3_SALTI (P60445) 50S ribosomal protein L3| Length = 209 Score = 32.3 bits (72), Expect = 1.4 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPXRVSYT 495 +F + +D+ G +KGKG+ G V RW R TH R IG P +V Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 AGQ G T + V ++ Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180
>RL3_ECOLI (P60438) 50S ribosomal protein L3| Length = 209 Score = 32.3 bits (72), Expect = 1.4 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPXRVSYT 495 +F + +D+ G +KGKG+ G V RW R TH R IG P +V Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 AGQ G T + V ++ Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180
>RL3_ECOL6 (P60439) 50S ribosomal protein L3| Length = 209 Score = 32.3 bits (72), Expect = 1.4 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPXRVSYT 495 +F + +D+ G +KGKG+ G V RW R TH R IG P +V Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 AGQ G T + V ++ Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180
>RL3_ECO57 (P60440) 50S ribosomal protein L3| Length = 209 Score = 32.3 bits (72), Expect = 1.4 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPXRVSYT 495 +F + +D+ G +KGKG+ G V RW R TH R IG P +V Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158 Query: 494 VARAGQNGYHHXTXMNKKVYKI 429 AGQ G T + V ++ Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180
>RL3_XYLFT (Q87E82) 50S ribosomal protein L3| Length = 215 Score = 32.0 bits (71), Expect = 1.8 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = -3 Query: 665 AVFQKDEMIDIIGVTKGKGYEGVVTR 588 ++F + +DI G+TKGKG++G + R Sbjct: 105 SIFAVGQKVDIQGITKGKGFQGTIKR 130
>RK3_TOBAC (O80360) 50S ribosomal protein L3, chloroplast precursor (Fragment)| Length = 259 Score = 32.0 bits (71), Expect = 1.8 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 3/81 (3%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH--RGLRKVACIGA-WHPXRVSYTV 492 +F++ +++D+ G T GKG++G + R R + TH + R++ IGA P RV Sbjct: 144 LFKEGDLVDVSGTTIGKGFQGGIKRHNFKR-GQMTHGSKSHRQLGSIGAGTTPGRVYKGK 202 Query: 491 ARAGQNGYHHXTXMNKKVYKI 429 G+ G K+ KI Sbjct: 203 KMPGRMGGTKRKIRKLKIVKI 223
>RL3_YERPS (P11252) 50S ribosomal protein L3| Length = 209 Score = 32.0 bits (71), Expect = 1.8 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRW 585 +F + +D+ G +KGKG+ G V RW Sbjct: 100 IFADVKKVDVTGTSKGKGFAGTVKRW 125
>RL3_YERPE (Q8ZJA9) 50S ribosomal protein L3| Length = 209 Score = 32.0 bits (71), Expect = 1.8 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRW 585 +F + +D+ G +KGKG+ G V RW Sbjct: 100 IFADVKKVDVTGTSKGKGFAGTVKRW 125
>RL3_PHOLL (Q7MYF1) 50S ribosomal protein L3| Length = 209 Score = 32.0 bits (71), Expect = 1.8 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRW 585 +F + +D+ G +KGKG+ G V RW Sbjct: 100 IFADVKKVDVTGTSKGKGFAGTVKRW 125
>RL3_WIGBR (Q8D212) 50S ribosomal protein L3| Length = 215 Score = 31.6 bits (70), Expect = 2.3 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%) Frame = -3 Query: 641 IDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPXRVSYTVARAGQNG 471 ++I G++KGKG+ G + RW L R IG P +V +G G Sbjct: 107 VNITGISKGKGFSGTMKRWNFHGQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMSGHLG 166 Query: 470 YHHXTXMNKKVYKI 429 Y+ T N V KI Sbjct: 167 YNKNTVKNLFVVKI 180
>RL3_BRAJA (Q89J84) 50S ribosomal protein L3| Length = 238 Score = 31.6 bits (70), Expect = 2.3 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 10/93 (10%) Frame = -3 Query: 677 VPIDAVFQKD-----EMIDIIGVTKGKGYEGVVTRWG-----VTRLPRKTHRGLRKVACI 528 +P+ A Q D + +D+ G + GKG+ G + RW T +HR + Sbjct: 91 IPVGAEIQADHFVVGQFVDVTGTSVGKGFAGGMKRWNFGGLRATHGVSISHRSIGSTG-- 148 Query: 527 GAWHPXRVSYTVARAGQNGYHHXTXMNKKVYKI 429 G P + G G T +N +V ++ Sbjct: 149 GRQDPGKTWKNKKMPGHMGVDRITTLNLRVVQL 181
>RL3_MYCGE (P47397) 50S ribosomal protein L3| Length = 257 Score = 31.6 bits (70), Expect = 2.3 Identities = 10/26 (38%), Positives = 18/26 (69%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRW 585 +F+ E +D+ +TKG+G+ G + RW Sbjct: 101 LFKIGEYVDVTSLTKGRGFTGAIKRW 126
>RL3_RHOPA (P60456) 50S ribosomal protein L3 (RRP-L3)| Length = 241 Score = 31.2 bits (69), Expect = 3.1 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 10/90 (11%) Frame = -3 Query: 677 VPIDAVFQKD-----EMIDIIGVTKGKGYEGVVTRWG-----VTRLPRKTHRGLRKVACI 528 +P+ A Q D + +D+ G + GKG+ G + RW T +HR + Sbjct: 91 LPVGAEIQADHFVVGQFVDVTGTSTGKGFAGGMKRWNFGGLRATHGVSVSHRSIGSTG-- 148 Query: 527 GAWHPXRVSYTVARAGQNGYHHXTXMNKKV 438 G P + G G T +N +V Sbjct: 149 GRQDPGKTFKNKKMPGHMGVDRVTTLNLRV 178
>CY42_TRYBB (Q99396) Receptor-type adenylate cyclase GRESAG 4.2 (EC 4.6.1.1)| (ATP pyrophosphate-lyase) (Adenylyl cyclase) (Fragment) Length = 572 Score = 31.2 bits (69), Expect = 3.1 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Frame = -3 Query: 506 VSYTVARAGQNGYHHXTXMNKKVYKIGKVGQ-----ETHDASTEFDRTEKDITPMGGFPH 342 + Y G + Y + +G GQ ET+ + + +R++ D+TP+GG P Sbjct: 401 IRYDEVTKGYDYYGQTANTAARTESVGNGGQVLMTCETYHSLSTAERSQFDVTPLGGVPL 460 Query: 341 YGV 333 GV Sbjct: 461 RGV 463
>RL3_RALSO (Q8XV12) 50S ribosomal protein L3| Length = 220 Score = 30.8 bits (68), Expect = 4.0 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTRW 585 +F D+ ID+ G T GKGY G + R+ Sbjct: 103 LFSVDQKIDVQGTTIGKGYAGTIKRY 128
>FLGH_PSEPU (Q52081) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 231 Score = 30.8 bits (68), Expect = 4.0 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 6/60 (10%) Frame = +3 Query: 474 ILTSPSNSVX--HPXRMPGTNTGNLAKTSVGLAGKAGDTPTCXNTF----ITLTLGYTDD 635 + +SPS S+ + G+ +KT +GL G TP N F ++L GY+ D Sbjct: 68 VTSSPSRSMSATSASKNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSGD 127
>FLGH_PSEPK (Q88ER9) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 231 Score = 30.8 bits (68), Expect = 4.0 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Frame = +3 Query: 465 VVSILTSPSNSVXHPXRMPGTNTGNLAKTSVGLAGKAGDTPTCXNTF----ITLTLGYTD 632 V I+T N + G+ +KT +GL G TP N F ++L GY+ Sbjct: 67 VGDIITITLNERTSASKNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSG 126 Query: 633 D 635 D Sbjct: 127 D 127
>RL3_RHOBA (Q7UN20) 50S ribosomal protein L3| Length = 228 Score = 30.8 bits (68), Expect = 4.0 Identities = 34/139 (24%), Positives = 50/139 (35%), Gaps = 5/139 (3%) Frame = -3 Query: 659 FQKDEMIDIIGVTKGKGYEGVVTRWG-----VTRLPRKTHRGLRKVACIGAWHPXRVSYT 495 F + +DI G +KG+G+ GV+ R T +K HR + P R Sbjct: 119 FNDVKKVDITGTSKGRGFAGVMKRHNFAGQRATHGVKKCHRHAGGTGMSAS--PSRTFKG 176 Query: 494 VARAGQNGYHHXTXMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 315 AGQ G T N +V ++ DA + L Sbjct: 177 KRMAGQYGNAKVTTRNLEVVRV--------DAEN-----------------------NLL 205 Query: 314 MIKGCCVGPKKRVVTLRQS 258 MI+G GP V++RQ+ Sbjct: 206 MIRGAVPGPNGGFVSIRQT 224
>IPAC_SHIFL (P18012) Invasin ipaC (42 kDa antigen)| Length = 363 Score = 30.8 bits (68), Expect = 4.0 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +3 Query: 117 SSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 266 SS+++ L I +L+ L TA KLG + + D + +++QGLA Sbjct: 103 SSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLA 152
>IPAC_SHIDY (Q03946) Invasin ipaC (42 kDa antigen)| Length = 363 Score = 30.8 bits (68), Expect = 4.0 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +3 Query: 117 SSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 266 SS+++ L I +L+ L TA KLG + + D + +++QGLA Sbjct: 103 SSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLA 152
>RL3_PLARO (P72233) 50S ribosomal protein L3 (Fragment)| Length = 140 Score = 30.4 bits (67), Expect = 5.2 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = -3 Query: 659 FQKDEMIDIIGVTKGKGYEGVVTRWG 582 F+ + +D+ G +KGKG+ GV+ R G Sbjct: 105 FEAGQFVDVTGKSKGKGFAGVMKRHG 130
>ICAM5_HUMAN (Q9UMF0) Intercellular adhesion molecule 5 precursor (ICAM-5)| (Telencephalin) Length = 924 Score = 30.4 bits (67), Expect = 5.2 Identities = 16/66 (24%), Positives = 27/66 (40%) Frame = +3 Query: 171 ETAVPKLGRGVDKLELDFLQCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVRE 350 E+ P ++ E L C RG G+ + WP+ + + G +H + Sbjct: 670 ESTCPSHQTWLEGAEASALACAARGRPSPGVRCSREGIPWPEQQRVSREDAGTYHCVATN 729 Query: 351 ATHGSD 368 A HG+D Sbjct: 730 A-HGTD 734
>HEM3_DESVH (Q72AV0) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 315 Score = 30.4 bits (67), Expect = 5.2 Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Frame = +3 Query: 111 LRSSSSLELAIEPLL----LVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLAEGHH 278 LR S L LA+ P L L G ++T + KL G E D + T GL + GLA HH Sbjct: 129 LRRQSQL-LALRPDLDIISLRGNVDTRLRKLMDG----EFDAIVMATAGLKRLGLAAPHH 183 Query: 279 TLLWP 293 +L P Sbjct: 184 EVLAP 188
>RUVB_RHOBA (Q7UPG4) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 366 Score = 30.4 bits (67), Expect = 5.2 Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 2/87 (2%) Frame = +3 Query: 93 KMTQLILRSSSSLELAIEPLL--LVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 266 ++ +++LR+S L + ++P ++ + P+L D+ Q +T+G ++ + Sbjct: 216 ELAEIVLRNSKKLNIEVDPTSAGVIADRSRSTPRLANNRLLWVRDYAQSKTKGNVEASVC 275 Query: 267 EGHHTLLWPDTASLDHQVVGLHHTIVR 347 E ++ D LD Q T++R Sbjct: 276 EAALDMIGIDHLGLDKQDRNYLDTLMR 302
>BPA1_MOUSE (Q91ZU6) Bullous pemphigoid antigen 1, isoforms 1/2/3/4 (BPA)| (Hemidesmosomal plaque protein) (Dystonia musculorum protein) (Dystonin) Length = 7389 Score = 30.0 bits (66), Expect = 6.8 Identities = 18/55 (32%), Positives = 33/55 (60%) Frame = +3 Query: 84 RFDKMTQLILRSSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGL 248 R+ +T+L + +LE A++ L G L++ +L +DK+E++ L ET+GL Sbjct: 5516 RYKDITKLSADVAKTLEHALQ---LAGQLQSMHKELCNWLDKVEVELLSYETQGL 5567
>RL3_NITEU (Q82X88) 50S ribosomal protein L3| Length = 215 Score = 29.6 bits (65), Expect = 8.9 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Frame = -3 Query: 662 VFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPXRVSYTV 492 +F+ +D+ G++ GKGY G + R + +R R IG A P RV Sbjct: 103 LFEVGSKVDVCGISIGKGYAGTIKRHNFSSSRASHGNSRSHNVPGSIGMAQDPGRVFPGK 162 Query: 491 ARAGQNGYHHXTXMNKKVYKI 429 G G T N +V ++ Sbjct: 163 KMTGHLGNAQCTVQNIEVVRV 183
>RUVB_ENTFA (Q839T5) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 338 Score = 29.6 bits (65), Expect = 8.9 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 5/86 (5%) Frame = +3 Query: 72 VSHVRF---DKMTQLILRSSSSLELAI--EPLLLVGGLETAVPKLGRGVDKLELDFLQCE 236 +SH+ + + +++LRS+ + I E + P++ + K DF Q + Sbjct: 178 ISHMEYYQEQDLKEIVLRSADIFQTEIFEEGAFEIARRSRGTPRIANRLLKRVRDFAQVQ 237 Query: 237 TRGLLQQGLAEGHHTLLWPDTASLDH 314 + G + + +A+ TLL D LD+ Sbjct: 238 SDGKIDRAIADKALTLLQVDHQGLDY 263
>POLR_OYMV (P20127) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1776 Score = 29.6 bits (65), Expect = 8.9 Identities = 18/85 (21%), Positives = 34/85 (40%) Frame = +1 Query: 205 TNLSLISSSARREVCFSRDWRRVTTRFFGPTQHPLIIR*SAFTTP**GKPPMGVMSFSVL 384 T +++S+++R + DWR R F +QH V Sbjct: 1400 TQATIVSNASRSDP----DWRYTVVRIFAKSQH------------------------KVN 1431 Query: 385 SNSVEASWVSCPTLPILYTFLFIXV 459 S+ SW +C TL +++ F+ + + Sbjct: 1432 DGSIFGSWKACQTLALMHDFVILTL 1456 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,405,645 Number of Sequences: 219361 Number of extensions: 2167099 Number of successful extensions: 6475 Number of sequences better than 10.0: 190 Number of HSP's better than 10.0 without gapping: 6153 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6394 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6712189044 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
