| Clone Name | rbags7a03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR734254.2|CNS0GTBX Tetraodon nigroviridis full-length cDNA Length = 741 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 tcccaacggggaggaacgc 19 ||||||||||||||||||| Sbjct: 256 tcccaacggggaggaacgc 274
>emb|CR723721.2|CNS0GLDB Tetraodon nigroviridis full-length cDNA Length = 743 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 tcccaacggggaggaacgc 19 ||||||||||||||||||| Sbjct: 256 tcccaacggggaggaacgc 274
>emb|CR701018.2|CNS0G3UU Tetraodon nigroviridis full-length cDNA Length = 1016 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 tcccaacggggaggaacgc 19 ||||||||||||||||||| Sbjct: 531 tcccaacggggaggaacgc 549
>emb|CR697486.2|CNS0G14Q Tetraodon nigroviridis full-length cDNA Length = 1015 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 tcccaacggggaggaacgc 19 ||||||||||||||||||| Sbjct: 530 tcccaacggggaggaacgc 548
>emb|CR685407.2|CNS0FRT7 Tetraodon nigroviridis full-length cDNA Length = 877 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 tcccaacggggaggaacgc 19 ||||||||||||||||||| Sbjct: 393 tcccaacggggaggaacgc 411
>gb|AF199154.1|AF199154 Oedipina parvipes MVZ 210404 cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product Length = 385 Score = 38.2 bits (19), Expect = 2.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 41 gggagatctacagaggaattatt 63 |||||||||||| |||||||||| Sbjct: 48 gggagatctacaaaggaattatt 26
>emb|AL611986.15| Mouse DNA sequence from clone RP23-74I9 on chromosome 15, complete sequence Length = 191808 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 agggagatctacagaggaa 58 ||||||||||||||||||| Sbjct: 113695 agggagatctacagaggaa 113713
>gb|BC077566.1| Xenopus laevis tubulin, gamma complex associated protein 2, mRNA (cDNA clone MGC:83533 IMAGE:5078639), complete cds Length = 1833 Score = 36.2 bits (18), Expect = 9.3 Identities = 18/18 (100%) Strand = Plus / Plus Query: 45 gatctacagaggaattat 62 |||||||||||||||||| Sbjct: 1297 gatctacagaggaattat 1314
>gb|AC117594.8| Mus musculus chromosome 3, clone RP23-335D16, complete sequence Length = 230457 Score = 36.2 bits (18), Expect = 9.3 Identities = 18/18 (100%) Strand = Plus / Plus Query: 46 atctacagaggaattatt 63 |||||||||||||||||| Sbjct: 184313 atctacagaggaattatt 184330
>emb|AL589947.3| Human DNA sequence from clone RP11-127B16 on chromosome 6 Contaims a novel gene and a CpG island, complete sequence Length = 143715 Score = 36.2 bits (18), Expect = 9.3 Identities = 18/18 (100%) Strand = Plus / Plus Query: 46 atctacagaggaattatt 63 |||||||||||||||||| Sbjct: 28458 atctacagaggaattatt 28475
>gb|AC012099.4|AC012099 Homo sapiens chromosome 14 clone RP11-45G3 containing neurexin III gene, partial cds, complete sequence Length = 157871 Score = 36.2 bits (18), Expect = 9.3 Identities = 18/18 (100%) Strand = Plus / Plus Query: 46 atctacagaggaattatt 63 |||||||||||||||||| Sbjct: 54604 atctacagaggaattatt 54621
>gb|AC132438.3| Mus musculus BAC clone RP23-234G15 from 3, complete sequence Length = 180660 Score = 36.2 bits (18), Expect = 9.3 Identities = 18/18 (100%) Strand = Plus / Minus Query: 46 atctacagaggaattatt 63 |||||||||||||||||| Sbjct: 174968 atctacagaggaattatt 174951 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 245,210 Number of Sequences: 3902068 Number of extensions: 245210 Number of successful extensions: 15031 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 15018 Number of HSP's gapped (non-prelim): 13 length of query: 63 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 42 effective length of database: 17,151,101,840 effective search space: 720346277280 effective search space used: 720346277280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)