ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags6k15 |
|---|---|
| Clone Library Name | barley_pub |
>ALDH_LINUS (Q40255) Probable aldehyde dehydrogenase (EC 1.2.1.3)| (Flax-inducible sequence 1) Length = 551 Score = 249 bits (637), Expect = 4e-66 Identities = 118/144 (81%), Positives = 130/144 (90%) Frame = -1 Query: 648 IYGAFKPTAVFVPLVEILKSDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLT 469 IYGA KPTAV+VPL EILK N+ELVTKEIFGPFQVVTEY QL +VLEA ERM+AHLT Sbjct: 408 IYGAVKPTAVYVPLEEILKVSNYELVTKEIFGPFQVVTEYKNSQLPMVLEALERMHAHLT 467 Query: 468 AAVVSNDKLFLQEVLGKSVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLV 289 AAVVSND+LFLQEV+G +VNGTTYAG+RARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLV Sbjct: 468 AAVVSNDQLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLV 527 Query: 288 WSCHREIIYDIGPLPKNWALPSAT 217 WSCHREIIYDIGP+ +W +P +T Sbjct: 528 WSCHREIIYDIGPVSHHWEIPPST 551
>CROM_OCTDO (P30841) Omega-crystallin| Length = 495 Score = 37.7 bits (86), Expect = 0.030 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 2/94 (2%) Frame = -1 Query: 591 SDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAAVVSNDKLFLQEVLGKSV 412 SDN ++ +EIFGP Q++ ++ + L+ V++ C + + AA+ +ND + Sbjct: 385 SDNMKIAKEEIFGPVQLLMKFRD--LDDVIDRCNNSDYGMAAAIFTNDINRIMTFTNAVN 442 Query: 411 NGTTYAGIRARTTGAPQNHWF--GPAGDPRGAGI 316 GT + +HWF P G + +GI Sbjct: 443 TGTIWVN--------TFHHWFPQAPFGGFKTSGI 468
>PUT2_SCHPO (O74766) Probable delta-1-pyrroline-5-carboxylate dehydrogenase (EC| 1.5.1.12) (P5C dehydrogenase) Length = 548 Score = 37.0 bits (84), Expect = 0.051 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 1/99 (1%) Frame = -1 Query: 612 PLVEILKSDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAH-LTAAVVSNDKLFL 436 P V + K+ ++ E+FGP V Y +D L+ V + + + LT ++ + D++ + Sbjct: 416 PTVLLSKNPKHDIFVNELFGPVLSVYVYEDDNLDAVCDLIDTTTPYGLTGSIFAQDRVVV 475 Query: 435 QEVLGKSVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAG 319 +++ + N I + TGA P G R +G Sbjct: 476 RKLTDRLRNAAGNFYINDKCTGAVVGE--QPFGGARASG 512
>PUTA_KLEAE (O52485) Bifunctional protein putA [Includes: Proline dehydrogenase| (EC 1.5.99.8) (Proline oxidase); Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) (P5C dehydrogenase)] Length = 1312 Score = 36.2 bits (82), Expect = 0.087 Identities = 21/74 (28%), Positives = 38/74 (51%) Frame = -1 Query: 618 FVPLVEILKSDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAAVVSNDKLF 439 FVP +++ D+F+ + KE+FGP V Y+ ++L+ ++E LT V + Sbjct: 1001 FVPPT-LIELDSFDELKKEVFGPVLHVVRYNRNELDKLVEQINASGYGLTLGVHTRIDET 1059 Query: 438 LQEVLGKSVNGTTY 397 + +V G + G Y Sbjct: 1060 IAQVTGSAKVGNLY 1073
>CROM_OMMSL (P30842) Omega-crystallin| Length = 494 Score = 35.4 bits (80), Expect = 0.15 Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 4/96 (4%) Frame = -1 Query: 591 SDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAAVVSNDKLFLQEVLGKSV 412 +D + +EIFGP Q++ ++ + ++ V++ C + + AA+ +ND + +S+ Sbjct: 384 TDEMKFSQEEIFGPVQLIMKFKD--MDEVIDRCNNTDYGMAAAIFTND-------INRSI 434 Query: 411 NGT--TYAGIRARTTGAPQNHWF--GPAGDPRGAGI 316 T Y G T NHWF P G + +G+ Sbjct: 435 TFTHAMYCGTVWVNT---YNHWFPQAPFGGYKKSGL 467
>PUTA_SALTY (P10503) Bifunctional protein putA [Includes: Proline dehydrogenase| (EC 1.5.99.8) (Proline oxidase); Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) (P5C dehydrogenase)] Length = 1320 Score = 35.0 bits (79), Expect = 0.19 Identities = 22/77 (28%), Positives = 37/77 (48%) Frame = -1 Query: 627 TAVFVPLVEILKSDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAAVVSND 448 T FV + +++ +NF + KE+FGP V Y+ +QL ++E LT V + Sbjct: 998 TGTFV-MPTLIELENFAELEKEVFGPVLHVVRYNRNQLAELIEQINASGYGLTLGVHTRI 1056 Query: 447 KLFLQEVLGKSVNGTTY 397 + +V G + G Y Sbjct: 1057 DETIAQVTGSAHVGNLY 1073
>AL4A1_MOUSE (Q8CHT0) Delta-1-pyrroline-5-carboxylate dehydrogenase,| mitochondrial precursor (EC 1.5.1.12) (P5C dehydrogenase) (Aldehyde dehydrogenase 4A1) Length = 562 Score = 35.0 bits (79), Expect = 0.19 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 1/99 (1%) Frame = -1 Query: 612 PLVEILKSDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAH-LTAAVVSNDKLFL 436 P + K ++ +EIFGP V Y +D+ L+ + ++ LT AV + DK + Sbjct: 430 PCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIV 489 Query: 435 QEVLGKSVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAG 319 QE N I ++TG+ P G R +G Sbjct: 490 QEATRMLRNAAGNFYINDKSTGSVVGQ--QPFGGARASG 526
>AL4A1_HUMAN (P30038) Delta-1-pyrroline-5-carboxylate dehydrogenase,| mitochondrial precursor (EC 1.5.1.12) (P5C dehydrogenase) (Aldehyde dehydrogenase 4A1) Length = 563 Score = 34.3 bits (77), Expect = 0.33 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 1/99 (1%) Frame = -1 Query: 612 PLVEILKSDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAH-LTAAVVSNDKLFL 436 P + K ++ +EIFGP V Y +D+ + L+ + ++ LT AV S DK + Sbjct: 431 PCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVV 490 Query: 435 QEVLGKSVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAG 319 QE N I ++TG+ P G R +G Sbjct: 491 QEATKVLRNAAGNFYINDKSTGSIVGQ--QPFGGARASG 527
>PUTA_ECOLI (P09546) Bifunctional protein putA [Includes: Proline dehydrogenase| (EC 1.5.99.8) (Proline oxidase); Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) (P5C dehydrogenase)] Length = 1320 Score = 33.9 bits (76), Expect = 0.43 Identities = 19/68 (27%), Positives = 33/68 (48%) Frame = -1 Query: 600 ILKSDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAAVVSNDKLFLQEVLG 421 +++ D+F + KE+FGP V Y+ +QL ++E LT V + + +V G Sbjct: 1006 LIELDDFAELQKEVFGPVLHVVRYNRNQLPELIEQINASGYGLTLGVHTRIDETIAQVTG 1065 Query: 420 KSVNGTTY 397 + G Y Sbjct: 1066 SAHVGNLY 1073
>DEC12_DROME (P18170) Defective chorion-1 protein, FC106 isoform precursor| [Contains: Defective chorion-1 protein, FC106 isoform; FC106 S80; FC106 S60] Length = 950 Score = 32.7 bits (73), Expect = 0.96 Identities = 30/115 (26%), Positives = 41/115 (35%) Frame = +2 Query: 296 LMASGVPIPAPLGSPAGPNQWFCGAPVVLARIPAYVVPLTDFPSTSCRNNLSFETTAAVR 475 L+ + P+PAP +PA AP A PA P+ D P + AA++ Sbjct: 175 LLGAAAPVPAPAPAPAAAPP---PAPAPAADPPA--APVPDAPQPAILGQ------AALQ 223 Query: 476 CAFILXXXXXXXXXXXXXXXVTTWKGPNISFVTSSKLSLFRISTSGTNTAVGLKA 640 AF V T+ PN+ FV + F T A G A Sbjct: 224 NAFTFFNPANFDASSLLGQSVPTFAPPNLDFVAQMQRQFFPGMTPAQPAAAGTDA 278
>DEC11_DROME (P18169) Defective chorion-1 protein, FC125 isoform precursor| Length = 1208 Score = 32.7 bits (73), Expect = 0.96 Identities = 30/115 (26%), Positives = 41/115 (35%) Frame = +2 Query: 296 LMASGVPIPAPLGSPAGPNQWFCGAPVVLARIPAYVVPLTDFPSTSCRNNLSFETTAAVR 475 L+ + P+PAP +PA AP A PA P+ D P + AA++ Sbjct: 175 LLGAAAPVPAPAPAPAAAPP---PAPAPAADPPA--APVPDAPQPAILGQ------AALQ 223 Query: 476 CAFILXXXXXXXXXXXXXXXVTTWKGPNISFVTSSKLSLFRISTSGTNTAVGLKA 640 AF V T+ PN+ FV + F T A G A Sbjct: 224 NAFTFFNPANFDASSLLGQSVPTFAPPNLDFVAQMQRQFFPGMTPAQPAAAGTDA 278
>DEC13_DROME (P18171) Defective chorion-1 protein, FC177 isoform precursor| Length = 1590 Score = 32.7 bits (73), Expect = 0.96 Identities = 30/115 (26%), Positives = 41/115 (35%) Frame = +2 Query: 296 LMASGVPIPAPLGSPAGPNQWFCGAPVVLARIPAYVVPLTDFPSTSCRNNLSFETTAAVR 475 L+ + P+PAP +PA AP A PA P+ D P + AA++ Sbjct: 175 LLGAAAPVPAPAPAPAAAPP---PAPAPAADPPA--APVPDAPQPAILGQ------AALQ 223 Query: 476 CAFILXXXXXXXXXXXXXXXVTTWKGPNISFVTSSKLSLFRISTSGTNTAVGLKA 640 AF V T+ PN+ FV + F T A G A Sbjct: 224 NAFTFFNPANFDASSLLGQSVPTFAPPNLDFVAQMQRQFFPGMTPAQPAAAGTDA 278
>ALDH_PSEOL (P12693) Aldehyde dehydrogenase (EC 1.2.1.3)| Length = 483 Score = 32.0 bits (71), Expect = 1.6 Identities = 22/90 (24%), Positives = 40/90 (44%) Frame = -1 Query: 567 KEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAAVVSNDKLFLQEVLGKSVNGTTYAGI 388 +EIFGP + EY D ++ V++ + L V S DK F+ ++ ++ +G+ + Sbjct: 357 EEIFGPLLPIIEY--DDIDSVIKRVNDGDKPLALYVFSEDKQFVNNIVARTSSGSVGVNL 414 Query: 387 RARTTGAPQNHWFGPAGDPRGAGIGTPEAI 298 P P G +GIG+ + Sbjct: 415 SVVHFLHPNL----PFGGVNNSGIGSAHGV 440
>AL4A1_BRARE (Q7SY23) Delta-1-pyrroline-5-carboxylate dehydrogenase,| mitochondrial precursor (EC 1.5.1.12) (P5C dehydrogenase) (Aldehyde dehydrogenase 4A1) Length = 556 Score = 32.0 bits (71), Expect = 1.6 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Frame = -1 Query: 579 ELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAH-LTAAVVSNDKLFLQEVLGKSV-NG 406 +++ +EIFGP V Y E+ + VL + + + LT A+ DK ++E GK++ N Sbjct: 435 KIMNEEIFGPVLTVYVYPENDYKKVLHLIDNTSPYALTGAIFPQDKSVIEEA-GKALRNA 493 Query: 405 TTYAGIRARTTGA 367 I ++TG+ Sbjct: 494 AGNYYINDKSTGS 506
>BETB_YERPS (Q66D53) Betaine aldehyde dehydrogenase (EC 1.2.1.8) (BADH)| Length = 490 Score = 32.0 bits (71), Expect = 1.6 Identities = 30/115 (26%), Positives = 45/115 (39%) Frame = -1 Query: 642 GAFKPTAVFVPLVEILKSDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAA 463 GA A P V D+ ++V +EIFGP + Y + E V+ L A Sbjct: 361 GALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSE--EEVIRRANDTEYGLAAG 418 Query: 462 VVSNDKLFLQEVLGKSVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGTPEAI 298 VV+ D V+ + G + I AP+ P G + +G+G I Sbjct: 419 VVTQDLNRAHRVIHQLQAGICW--INTWGESAPEM----PVGGYKHSGVGRENGI 467
>BETB_YERPE (Q8ZGV9) Betaine aldehyde dehydrogenase (EC 1.2.1.8) (BADH)| Length = 490 Score = 32.0 bits (71), Expect = 1.6 Identities = 30/115 (26%), Positives = 45/115 (39%) Frame = -1 Query: 642 GAFKPTAVFVPLVEILKSDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAA 463 GA A P V D+ ++V +EIFGP + Y + E V+ L A Sbjct: 361 GALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSE--EEVIRRANDTEYGLAAG 418 Query: 462 VVSNDKLFLQEVLGKSVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGTPEAI 298 VV+ D V+ + G + I AP+ P G + +G+G I Sbjct: 419 VVTQDLNRAHRVIHQLQAGICW--INTWGESAPEM----PVGGYKHSGVGRENGI 467
>PUT2_AGABI (P78568) Delta-1-pyrroline-5-carboxylate dehydrogenase (EC| 1.5.1.12) (P5C dehydrogenase) Length = 546 Score = 31.6 bits (70), Expect = 2.1 Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 1/99 (1%) Frame = -1 Query: 612 PLVEILKSDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAH-LTAAVVSNDKLFL 436 P V + K + EIFGP + + E LE + + + LT A+ ++++ L Sbjct: 413 PTVILTKVPRSTTMVGEIFGPVVTAYVFEDSDYEKTLELIDTTSIYGLTGAIFASERQAL 472 Query: 435 QEVLGKSVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAG 319 +S N + TGA P G RG+G Sbjct: 473 LTATNRSRNAAGNIYYNEKCTGAVVGQ--QPFGGARGSG 509
>LUXG_VIBHA (P16447) Probable flavin reductase (EC 1.-.-.-)| Length = 233 Score = 31.2 bits (69), Expect = 2.8 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = -2 Query: 284 LATGRSYMTLVPCPRTGHFLRLHDMSRTAS*KNTLLMEK 168 L+ G ++ CP G FL LH S KNTL+ME+ Sbjct: 38 LSFGSLPFSIASCPSNGAFLELHIGGSDISKKNTLVMEE 76
>ALDH3_YEAST (P54114) Aldehyde dehydrogenase [NAD(P)+] 2 (EC 1.2.1.5)| Length = 506 Score = 31.2 bits (69), Expect = 2.8 Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%) Frame = -1 Query: 642 GAFKPTAVFVPLVEILKSDNFELVTKEIFGPFQVVTEYS--EDQLELVLEACERMNAHLT 469 G F P +F + E K L+ EIFGP VV++++ +D L+L + C + + + Sbjct: 385 GYFIPPTIFTDVPETSK-----LLRDEIFGPVVVVSKFTNYDDALKLANDTCYGLASAVF 439 Query: 468 AAVVSNDKLFLQEVLGKSV 412 V +F +++ +V Sbjct: 440 TKDVKKAHMFARDIKAGTV 458
>RCBT2_RAT (Q6P798) RCC1 and BTB domain-containing protein 2 (Regulator of| chromosome condensation and BTB domain-containing protein 2) (Chromosome condensation 1-like) Length = 551 Score = 30.8 bits (68), Expect = 3.6 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 6/70 (8%) Frame = -1 Query: 621 VFVPLVEILKSDNFELVTKEIFGPFQVVTEYSEDQLELVLE------ACERMNAHLTAAV 460 VF +E L +DN L +E G + T YSE +L+ + + CE L +A Sbjct: 440 VFRAFLEYLYTDNISLPPEEAVGLLDLATFYSETRLKKLCQQTIKQGICEENAIALLSAA 499 Query: 459 VSNDKLFLQE 430 V D L+E Sbjct: 500 VKYDAQDLEE 509
>RCBT2_MOUSE (Q99LJ7) RCC1 and BTB domain-containing protein 2 (Regulator of| chromosome condensation and BTB domain-containing protein 2) (Chromosome condensation 1-like) Length = 551 Score = 30.8 bits (68), Expect = 3.6 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 6/70 (8%) Frame = -1 Query: 621 VFVPLVEILKSDNFELVTKEIFGPFQVVTEYSEDQLELVLE------ACERMNAHLTAAV 460 VF +E L +DN L +E G + T YSE +L+ + + CE L +A Sbjct: 440 VFRAFLEYLYTDNISLSPEEAVGLLDLATFYSETRLKKLCQQTIKQGICEENAIALLSAA 499 Query: 459 VSNDKLFLQE 430 V D L+E Sbjct: 500 VKYDAQDLEE 509
>BETB_ACIAD (Q6FDF8) Betaine aldehyde dehydrogenase (EC 1.2.1.8) (BADH)| Length = 490 Score = 30.8 bits (68), Expect = 3.6 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = -1 Query: 588 DNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAAVVSND 448 D+ ++V +EIFGP + Y D +E +E N L A VV+ + Sbjct: 379 DDMKIVQEEIFGPVMSILTY--DTIEEAIERANNTNFGLAAGVVTQN 423
>SPEA_SYNPX (Q7U3S0) Biosynthetic arginine decarboxylase (EC 4.1.1.19) (ADC)| Length = 644 Score = 30.4 bits (67), Expect = 4.8 Identities = 13/44 (29%), Positives = 19/44 (43%) Frame = -1 Query: 420 KSVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLV 289 KS+ Y G+RA+ + W GD G+ PE + V Sbjct: 191 KSLGAAPYIGVRAKLSSRSTGRWGSSVGDKAKFGLSIPELLATV 234
>AL1A3_RAT (Q8K4D8) Aldehyde dehydrogenase 1A3 (EC 1.2.1.5) (Aldehyde| dehydrogenase 6) (Retinaldehyde dehydrogenase 3) (RALDH-3) Length = 512 Score = 30.4 bits (67), Expect = 4.8 Identities = 16/48 (33%), Positives = 27/48 (56%) Frame = -1 Query: 591 SDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAAVVSND 448 +DN + +EIFGP Q + ++ LE V++ + LTAAV + + Sbjct: 402 TDNMRIAKEEIFGPVQPILKFK--NLEEVIKRANSTDYGLTAAVFTKN 447
>AL1A3_MOUSE (Q9JHW9) Aldehyde dehydrogenase 1A3 (EC 1.2.1.5) (Aldehyde| dehydrogenase 6) (Retinaldehyde dehydrogenase 3) (RALDH-3) Length = 512 Score = 30.4 bits (67), Expect = 4.8 Identities = 16/48 (33%), Positives = 27/48 (56%) Frame = -1 Query: 591 SDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAAVVSND 448 +DN + +EIFGP Q + ++ LE V++ + LTAAV + + Sbjct: 402 TDNMRIAKEEIFGPVQPILKFK--NLEEVIKRANSTDYGLTAAVFTKN 447
>EDG8_PIG (Q684M3) Sphingosine 1-phosphate receptor Edg-8 (Endothelial| differentiation sphingolipid G-protein-coupled receptor 8) (Sphingosine 1-phosphate receptor 5) (S1P5) Length = 398 Score = 30.4 bits (67), Expect = 4.8 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = +1 Query: 139 RPANSVRVAFFSINSVFF*LAVLDISCSRRKCPVLGQ 249 R + V VAF + F L +LD++C R CPVL Q Sbjct: 251 RTLSVVLVAFVACWGPLFLLLLLDVACPARACPVLLQ 287
>ATL2J_ARATH (O80927) RING-H2 finger protein ATL2J| Length = 235 Score = 30.4 bits (67), Expect = 4.8 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +2 Query: 365 GAPVVLARIPAYVVPLTDFPSTSCRNNLSF 454 G +V+ PA VP TDFP T+ +N +F Sbjct: 12 GPGIVVVPTPATTVPTTDFPGTTITSNSTF 41
>BETB_PSEPK (Q88CW7) Betaine aldehyde dehydrogenase (EC 1.2.1.8) (BADH)| Length = 490 Score = 30.4 bits (67), Expect = 4.8 Identities = 26/115 (22%), Positives = 43/115 (37%) Frame = -1 Query: 642 GAFKPTAVFVPLVEILKSDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAA 463 G F A P V +D+ +V +EIFGP + Y + E V+ + L A Sbjct: 361 GDFAKGAFVAPTVFTDCTDDMTIVKEEIFGPVMSILTYETE--EEVIRRANDTDYGLAAG 418 Query: 462 VVSNDKLFLQEVLGKSVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGTPEAI 298 V +ND ++ K G + + P G + +G+G + Sbjct: 419 VCTNDITRAHRIIHKLEAGICWINAWGESPAEM------PVGGYKQSGVGRENGV 467
>ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing protein 1B (ARID| domain-containing protein 1B) (Osa homolog 2) (hOsa2) (p250R) (BRG1-binding protein hELD/OSA1) (BRG1-associated factor 250b) (BAF250B) Length = 2236 Score = 30.4 bits (67), Expect = 4.8 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 Query: 308 GVPIPAPLGSPAGPNQWFCGAPVVLARIPAYVVP 409 G P P+P+GSP G NQ G P+ A IP +P Sbjct: 720 GGPSPSPVGSPVGSNQSRSG-PISPASIPGSQMP 752
>CSF1_ASHGO (Q74ZX0) Protein CSF1| Length = 2887 Score = 30.4 bits (67), Expect = 4.8 Identities = 17/78 (21%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Frame = -1 Query: 648 IYGAFKPTAVFVPLVEILKSDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAH-- 475 +YG P++ E + +DNFE++ +++ G ++ EY+ D + + H Sbjct: 1045 LYGCIPPSSSLPLFPEPISADNFEVIFEKLLG--EIYQEYASDSSYQITDDSISSTEHDY 1102 Query: 474 ----LTAAVVSNDKLFLQ 433 + AA+ ++ LF++ Sbjct: 1103 HNQTVNAAIGTSSSLFIR 1120
>AL1A3_HUMAN (P47895) Aldehyde dehydrogenase 1A3 (EC 1.2.1.5) (Aldehyde| dehydrogenase 6) (Retinaldehyde dehydrogenase 3) (RALDH-3) Length = 512 Score = 30.0 bits (66), Expect = 6.2 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = -1 Query: 639 AFKPTAVFV-PLVEILKSDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAA 463 A + +F+ P V +DN + +EIFGP Q + ++ +E V++ + LTAA Sbjct: 385 AMEDKGLFIKPTVFSEVTDNMRIAKEEIFGPVQPILKFK--SIEEVIKRANSTDYGLTAA 442 Query: 462 VVSND 448 V + + Sbjct: 443 VFTKN 447
>AL1A2_POEGU (Q9I8W8) Retinal dehydrogenase 2 (EC 1.2.1.36) (RalDH2) (RALDH 2)| (RALDH(II)) (Retinaldehyde-specific dehydrogenase type 2) (Aldehyde dehydrogenase family 1 member A2) (zRalDH) Length = 517 Score = 30.0 bits (66), Expect = 6.2 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = -1 Query: 591 SDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAAVVSND 448 +D+ + +EIFGP Q + + ++ V+E + L AAV +ND Sbjct: 408 TDDMRIAKEEIFGPVQEILRFK--TMDEVIERANNSDFGLVAAVFTND 453
>ALDH2_YEAST (P47771) Aldehyde dehydrogenase [NAD(P)+] 1 (EC 1.2.1.5)| Length = 506 Score = 30.0 bits (66), Expect = 6.2 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 2/79 (2%) Frame = -1 Query: 642 GAFKPTAVFVPLVEILKSDNFELVTKEIFGPFQVVTEYS--EDQLELVLEACERMNAHLT 469 G F P +F + + K L+ EIFGP VV++++ +D L+L + C + + + Sbjct: 385 GYFIPPTIFTDVPQTSK-----LLQDEIFGPVVVVSKFTNYDDALKLANDTCYGLASAVF 439 Query: 468 AAVVSNDKLFLQEVLGKSV 412 V +F +++ +V Sbjct: 440 TKDVKKAHMFARDIKAGTV 458
>PYRK_LISIN (Q92AH4) Dihydroorotate dehydrogenase electron transfer subunit| Length = 254 Score = 30.0 bits (66), Expect = 6.2 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -3 Query: 628 YCCVCPTSGDSKKR*L*ACDEGDIW 554 Y CVCP +GD+KK+ C++G ++ Sbjct: 224 YACVCPKAGDTKKQ-FKVCEDGPVF 247
>BETB_PSEAE (Q9HTJ1) Betaine aldehyde dehydrogenase (EC 1.2.1.8) (BADH)| Length = 490 Score = 30.0 bits (66), Expect = 6.2 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 3/68 (4%) Frame = -1 Query: 642 GAFKPTAVFVPLVEILKSDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMN---AHL 472 GAF A P V D+ +V +EIFGP + Y ++ EA R N L Sbjct: 361 GAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDED-----EAIRRANDTEYGL 415 Query: 471 TAAVVSND 448 A VV+ D Sbjct: 416 AAGVVTQD 423
>AL1A2_RAT (Q63639) Retinal dehydrogenase 2 (EC 1.2.1.36) (RalDH2) (RALDH 2)| (RALDH(II)) (Retinaldehyde-specific dehydrogenase type 2) (Aldehyde dehydrogenase family 1 member A2) Length = 518 Score = 30.0 bits (66), Expect = 6.2 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = -1 Query: 591 SDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAAVVSND 448 +D+ + +EIFGP Q + + ++ V+E + L AAV +ND Sbjct: 408 TDDMRIAKEEIFGPVQEILRFK--TMDEVIERANNSDFGLVAAVFTND 453
>AL1A2_MOUSE (Q62148) Retinal dehydrogenase 2 (EC 1.2.1.36) (RalDH2) (RALDH 2)| (RALDH(II)) (Retinaldehyde-specific dehydrogenase type 2) (Aldehyde dehydrogenase family 1 member A2) Length = 518 Score = 30.0 bits (66), Expect = 6.2 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = -1 Query: 591 SDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAAVVSND 448 +D+ + +EIFGP Q + + ++ V+E + L AAV +ND Sbjct: 408 TDDMRIAKEEIFGPVQEILRFK--TMDEVIERANNSDFGLVAAVFTND 453
>AL1A2_HUMAN (O94788) Retinal dehydrogenase 2 (EC 1.2.1.36) (RalDH2) (RALDH 2)| (RALDH(II)) (Retinaldehyde-specific dehydrogenase type 2) (Aldehyde dehydrogenase family 1 member A2) Length = 518 Score = 30.0 bits (66), Expect = 6.2 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = -1 Query: 591 SDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAAVVSND 448 +D+ + +EIFGP Q + + ++ V+E + L AAV +ND Sbjct: 408 TDDMRIAKEEIFGPVQEILRFK--TMDEVIERANNSDFGLVAAVFTND 453
>METX_MANSM (Q65U29) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine| O-trans-acetylase) (Homoserine transacetylase) (HTA) Length = 359 Score = 29.6 bits (65), Expect = 8.1 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = -1 Query: 507 VLEACERMNAHLTAAVVSNDKLFLQEVLGKSVNGTTYAGI 388 + EA R+ AH T V+ND+LF L KS AG+ Sbjct: 288 IKEALSRIKAHYTLVAVTNDQLFKLTDLHKSKTLLEQAGV 327
>BETB_PSEF5 (Q4K4K8) Betaine aldehyde dehydrogenase (EC 1.2.1.8) (BADH)| Length = 490 Score = 29.6 bits (65), Expect = 8.1 Identities = 19/65 (29%), Positives = 29/65 (44%) Frame = -1 Query: 642 GAFKPTAVFVPLVEILKSDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAA 463 G F A P V +D+ +V +EIFGP + Y + E V+ + L A Sbjct: 361 GEFAKGAFVAPTVFTDCTDDMTIVREEIFGPVMAILTYETE--EEVIRRANDTDFGLAAG 418 Query: 462 VVSND 448 +V+ D Sbjct: 419 LVTKD 423
>CC058_HUMAN (Q8NDZ4) Protein C3orf58 precursor| Length = 430 Score = 29.6 bits (65), Expect = 8.1 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Frame = -3 Query: 487 DECASDSCSSFKRQIIPAGSTREIS*RYDVCWNSSKDH--WRST 362 D+C ++C SF ++I+ A +T + + Y VC N H WR T Sbjct: 335 DDCDKEACLSFSKEILCARATVDHN-YYAVCQNLLSRHATWRGT 377
>AL1A2_CHICK (O93344) Retinal dehydrogenase 2 (EC 1.2.1.36) (RalDH2) (RALDH 2)| (RALDH(II)) (Retinaldehyde-specific dehydrogenase type 2) (Aldehyde dehydrogenase family 1 member A2) Length = 518 Score = 29.6 bits (65), Expect = 8.1 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = -1 Query: 591 SDNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAAVVSND 448 +D+ + +EIFGP Q + + ++ V+E + L AAV +ND Sbjct: 408 TDDMRIAKEEIFGPVQEILRFK--TVDEVIERANNSDFGLVAAVFTND 453 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,884,836 Number of Sequences: 219361 Number of extensions: 2323051 Number of successful extensions: 6089 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 5875 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6088 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
