ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags6k15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF467539.1| Hordeum vulgare putative aldehyde dehydrogenase BIS1 (bis1) mRNA, complete cds Length = 1992 Score = 1251 bits (631), Expect = 0.0 Identities = 638/639 (99%), Gaps = 1/639 (0%) Strand = Plus / Minus Query: 13 ctccattaacaaccctcgtggtactccattcataattatgacctttactttgttcttggg 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1936 ctccattaacaaccctcgtggtactccattcataattatgacctttactttgttcttggg 1877 Query: 73 agtcgagnattctcccaattgcctacacggggcttccattattcaacacaacacggtacc 132 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1876 agtcgag-attctcccaattgcctacacggggcttccattattcaacacaacacggtacc 1818 Query: 133 agtcctcgaccagctaattcggtccgtgtagccttcttctccatcaacagcgtgttcttc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1817 agtcctcgaccagctaattcggtccgtgtagccttcttctccatcaacagcgtgttcttc 1758 Query: 193 tagctagccgtcctagacatatcatgtagccgaaggaagtgcccagttcttgggcaaggg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1757 tagctagccgtcctagacatatcatgtagccgaaggaagtgcccagttcttgggcaaggg 1698 Query: 253 accaatgtcatatatgatctccctgtggcaagaccagacgagtttgatggcttctggagt 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1697 accaatgtcatatatgatctccctgtggcaagaccagacgagtttgatggcttctggagt 1638 Query: 313 gccaatccccgcgcctcttgggtcaccggcaggaccaaaccagtggttctgtggagcgcc 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1637 gccaatccccgcgcctcttgggtcaccggcaggaccaaaccagtggttctgtggagcgcc 1578 Query: 373 agtggtccttgctcgaattccagcatacgtcgtaccgttaactgatttcccgagtacttc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1577 agtggtccttgctcgaattccagcatacgtcgtaccgttaactgatttcccgagtacttc 1518 Query: 433 ctgcaggaataatttgtcgtttgaaactactgcagctgtcagatgcgcattcatcctctc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1517 ctgcaggaataatttgtcgtttgaaactactgcagctgtcagatgcgcattcatcctctc 1458 Query: 493 gcaggcttctaataccaattcaagttgatcctcggagtattctgtaaccacctggaaagg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1457 gcaggcttctaataccaattcaagttgatcctcggagtattctgtaaccacctggaaagg 1398 Query: 553 accaaatatctccttcgtcacaagctcaaagttatcgctttttagaatctccactagtgg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1397 accaaatatctccttcgtcacaagctcaaagttatcgctttttagaatctccactagtgg 1338 Query: 613 gacaaacacagcagtaggcttgaaggcaccatatatttc 651 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1337 gacaaacacagcagtaggcttgaaggcaccatatatttc 1299
>gb|AF467542.1| Triticum aestivum putative aldehyde dehydrogenase WIS1 (wis1) mRNA, complete cds Length = 1999 Score = 773 bits (390), Expect = 0.0 Identities = 586/646 (90%), Gaps = 9/646 (1%) Strand = Plus / Minus Query: 13 ctccattaacaaccctcgtggtactccattcataattatgacctttactttgttcttggg 72 ||||||| |||||| |||| |||||||||||||||||| |||||||| | ||||| | || Sbjct: 1956 ctccattgacaaccatcgtagtactccattcataattacgacctttattgtgttccttgg 1897 Query: 73 agtcgagnattctcccaatt-gcctacacggggcttccattattcaacacaacacggtac 131 ||| || | |||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct: 1896 ggtccag-actctcccaatttgcctacacgaggcttccattattcaacacaacacactgt 1838 Query: 132 cagtcctcgaccagctaattcggtccgtgtagccttcttctccatcaacag-cgtgttct 190 |||| ||| |||||||||||| |||||||| || |||| ||||||| ||| |||||||| Sbjct: 1837 cagttctcaaccagctaattctgtccgtgttgctttct-ctccatcgccagtcgtgttct 1779 Query: 191 tctagctagccgtcctagac-----atatcatgtagccgaaggaagtgcccagttcttgg 245 ||||||||| ||||||| | |||||||||||||| |||||||||||| ||||||| Sbjct: 1778 tctagctagttgtcctagcctaggcatatcatgtagccgcaggaagtgcccacttcttgg 1719 Query: 246 gcaagggaccaatgtcatatatgatctccctgtggcaagaccagacgagtttgatggctt 305 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1718 gcaaggggccaatgtcatatatgatctccctgtggcacgaccagacgagtttgatggctt 1659 Query: 306 ctggagtgccaatccccgcgcctcttgggtcaccggcaggaccaaaccagtggttctgtg 365 |||||||||| ||||| |||||||||||||| || |||||||||||||| |||||||| | Sbjct: 1658 ctggagtgccgatccctgcgcctcttgggtcgcccgcaggaccaaaccaatggttctgcg 1599 Query: 366 gagcgccagtggtccttgctcgaattccagcatacgtcgtaccgttaactgatttcccga 425 ||||||||||||||||||||||||||||||||||||| || |||||||| ||| |||| | Sbjct: 1598 gagcgccagtggtccttgctcgaattccagcatacgttgtcccgttaaccgatctcccca 1539 Query: 426 gtacttcctgcaggaataatttgtcgtttgaaactactgcagctgtcagatgcgcattca 485 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1538 gtacttcctgcaggaataacttgtcgtttgaaactactgcagctgtcagatgcgcattca 1479 Query: 486 tcctctcgcaggcttctaataccaattcaagttgatcctcggagtattctgtaaccacct 545 |||| || ||||||||||||||||||||||| ||||| || ||||||||||||||||||| Sbjct: 1478 tcctttcacaggcttctaataccaattcaagctgatcttcagagtattctgtaaccacct 1419 Query: 546 ggaaaggaccaaatatctccttcgtcacaagctcaaagttatcgctttttagaatctcca 605 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 1418 ggaaaggaccaaatatctcctttgtcacaagctcaaagttatcgcttttaagaatctcca 1359 Query: 606 ctagtgggacaaacacagcagtaggcttgaaggcaccatatatttc 651 ||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1358 ctagtgggacaaatacagcagtaggcttgatggcaccatatatttc 1313
>gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through 6 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 13878 Score = 660 bits (333), Expect = 0.0 Identities = 340/341 (99%), Gaps = 1/341 (0%) Strand = Plus / Minus Query: 13 ctccattaacaaccctcgtggtactccattcataattatgacctttactttgttcttggg 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11529 ctccattaacaaccctcgtggtactccattcataattatgacctttactttgttcttggg 11470 Query: 73 agtcgagnattctcccaattgcctacacggggcttccattattcaacacaacacggtacc 132 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11469 agtcgag-attctcccaattgcctacacggggcttccattattcaacacaacacggtacc 11411 Query: 133 agtcctcgaccagctaattcggtccgtgtagccttcttctccatcaacagcgtgttcttc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11410 agtcctcgaccagctaattcggtccgtgtagccttcttctccatcaacagcgtgttcttc 11351 Query: 193 tagctagccgtcctagacatatcatgtagccgaaggaagtgcccagttcttgggcaaggg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11350 tagctagccgtcctagacatatcatgtagccgaaggaagtgcccagttcttgggcaaggg 11291 Query: 253 accaatgtcatatatgatctccctgtggcaagaccagacgagtttgatggcttctggagt 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11290 accaatgtcatatatgatctccctgtggcaagaccagacgagtttgatggcttctggagt 11231 Query: 313 gccaatccccgcgcctcttgggtcaccggcaggaccaaacc 353 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 11230 gccaatccccgcgcctcttgggtcaccggcaggaccaaacc 11190 Score = 228 bits (115), Expect = 2e-56 Identities = 115/115 (100%) Strand = Plus / Minus Query: 432 cctgcaggaataatttgtcgtttgaaactactgcagctgtcagatgcgcattcatcctct 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10797 cctgcaggaataatttgtcgtttgaaactactgcagctgtcagatgcgcattcatcctct 10738 Query: 492 cgcaggcttctaataccaattcaagttgatcctcggagtattctgtaaccacctg 546 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10737 cgcaggcttctaataccaattcaagttgatcctcggagtattctgtaaccacctg 10683 Score = 218 bits (110), Expect = 2e-53 Identities = 110/110 (100%) Strand = Plus / Minus Query: 542 acctggaaaggaccaaatatctccttcgtcacaagctcaaagttatcgctttttagaatc 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10285 acctggaaaggaccaaatatctccttcgtcacaagctcaaagttatcgctttttagaatc 10226 Query: 602 tccactagtgggacaaacacagcagtaggcttgaaggcaccatatatttc 651 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10225 tccactagtgggacaaacacagcagtaggcttgaaggcaccatatatttc 10176 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 351 accagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtcgtaccgt 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11104 accagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtcgtaccgt 11045 Query: 411 taactgatttcccgagtacttcctg 435 ||||||||||||||||||||||||| Sbjct: 11044 taactgatttcccgagtacttcctg 11020
>dbj|AK121765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091O16, full insert sequence Length = 1932 Score = 404 bits (204), Expect = e-109 Identities = 378/436 (86%) Strand = Plus / Minus Query: 216 atgtagccgaaggaagtgcccagttcttgggcaagggaccaatgtcatatatgatctccc 275 ||||||| ||||| ||||||| |||||| |||||||| |||||||||||||||||||||| Sbjct: 1812 atgtagcggaaggtagtgcccggttcttaggcaaggggccaatgtcatatatgatctccc 1753 Query: 276 tgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttgggt 335 ||||||||||||| |||||||| |||||||||||||| || ||||| || |||||||| | Sbjct: 1752 tgtggcaagaccaaacgagtttaatggcttctggagttccgatccctgcacctcttggat 1693 Query: 336 caccggcaggaccaaaccagtggttctgtggagcgccagtggtccttgctcgaattccag 395 |||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| || || | Sbjct: 1692 caccagcaggcccaaaccagtggttctgtggagcaccagttgtccttgctcggatgccgg 1633 Query: 396 catacgtcgtaccgttaactgatttcccgagtacttcctgcaggaataatttgtcgtttg 455 |||| || || |||||||||||| ||| |||||||||||||||||||| |||||||| Sbjct: 1632 catatgttgtcccgttaactgatcgcccaagtacttcctgcaggaataaagggtcgtttg 1573 Query: 456 aaactactgcagctgtcagatgcgcattcatcctctcgcaggcttctaataccaattcaa 515 |||| |||||||| |||||||| || |||||||| || |||||||||||||| ||||||| Sbjct: 1572 aaacaactgcagccgtcagatgagcgttcatcctttcacaggcttctaatactaattcaa 1513 Query: 516 gttgatcctcggagtattctgtaaccacctggaaaggaccaaatatctccttcgtcacaa 575 | | ||| || || || |||||||||||||||||||||||||| |||||| | ||||||| Sbjct: 1512 gctcatcatcagaatactctgtaaccacctggaaaggaccaaagatctcccttgtcacaa 1453 Query: 576 gctcaaagttatcgctttttagaatctccactagtgggacaaacacagcagtaggcttga 635 ||||||| || | ||||| || || ||| ||| || ||||| |||||||| || |||| Sbjct: 1452 gctcaaaattgccacttttaaggatttccgatagaggaacaaatacagcagttggtttga 1393 Query: 636 aggcaccatatatttc 651 |||||||||||||||| Sbjct: 1392 aggcaccatatatttc 1377
>gb|AY105541.1| Zea mays PCO077463 mRNA sequence Length = 2150 Score = 379 bits (191), Expect = e-102 Identities = 368/427 (86%) Strand = Plus / Minus Query: 224 gaaggaagtgcccagttcttgggcaagggaccaatgtcatatatgatctccctgtggcaa 283 |||||||| |||||| ||| ||||| ||| || | ||||||||||| ||||||||||| Sbjct: 1761 gaaggaagcgcccagctctcgggcacgggcccgacgtcatatatgacttccctgtggcag 1702 Query: 284 gaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttgggtcaccggca 343 |||||||| |||||||||||||| ||||| || ||||| ||||||| || |||||||| Sbjct: 1701 gaccagacaagtttgatggcttccggagtcccgatccctgcgcctcgcggatcaccggcc 1642 Query: 344 ggaccaaaccagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtc 403 || |||||||||||||||||||||||||| |||||||| ||||||||||| || || || Sbjct: 1641 gggccaaaccagtggttctgtggagcgcccgtggtcctcgctcgaattccggcgtaggtt 1582 Query: 404 gtaccgttaactgatttcccgagtacttcctgcaggaataatttgtcgtttgaaactact 463 || |||||||| ||| |||| ||||| ||||||||||||| ||||||||| || ||| Sbjct: 1581 gtcccgttaacggatctcccaagtacatcctgcaggaatagcgggtcgtttgagacaact 1522 Query: 464 gcagctgtcagatgcgcattcatcctctcgcaggcttctaataccaattcaagttgatcc 523 |||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||| Sbjct: 1521 gcagctgtcagatgcgcattcatcctttcgcaggcttctaagaccaactcaagctgatcc 1462 Query: 524 tcggagtattctgtaaccacctggaaaggaccaaatatctccttcgtcacaagctcaaag 583 || ||||||||||| || |||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1461 tcagagtattctgtgactacctggaatggaccaaatatctcctttgtcacaagctcgaag 1402 Query: 584 ttatcgctttttagaatctccactagtgggacaaacacagcagtaggcttgaaggcacca 643 || | ||||||||||| || |||| || ||||| |||||||||||||| | ||||||| Sbjct: 1401 ttcccactttttagaatttcttctagaggaacaaatacagcagtaggcttcatggcacca 1342 Query: 644 tatattt 650 || |||| Sbjct: 1341 taaattt 1335
>gb|DQ154924.1| Triticum turgidum RAB7 (RAB7) gene, exons 1, 2 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 9338 Score = 333 bits (168), Expect = 4e-88 Identities = 307/348 (88%), Gaps = 14/348 (4%) Strand = Plus / Minus Query: 13 ctccattaacaaccctcgtggtact-ccattcataattatgacctttactttgttctt-g 70 ||||||| |||||| |||| ||||| |||||||||||||||||||||| | ||||| | | Sbjct: 8723 ctccattgacaaccatcgtagtacttccattcataattatgacctttattgtgttcctag 8664 Query: 71 ggagtcgagnattctcccaattgcctacacggggcttccattattcaacacaacacggta 130 || |||||| | ||||||||||||||||||| ||||||||||||||||||||| | Sbjct: 8663 ggggtcgag-actctcccaattgcctacacgaggcttccattattcaacacaa-----tg 8610 Query: 131 ccagtcctcgaccagctaattcggtccgtgtagccttcttctccatcaacagcgtgttct 190 |||| ||| |||||||||||| |||||||| || |||| ||||||| | |||||||| Sbjct: 8609 tcagttctcaaccagctaattctgtccgtgttgctttct-ctccatcgccgtcgtgttct 8551 Query: 191 tctagctagccgtcctaga-----catatcatgtagccgaaggaagtgcccagttcttgg 245 ||||||||| ||||||| ||||||||||||||| |||||||||||| ||||||| Sbjct: 8550 tctagctagttgtcctagcttaggcatatcatgtagccgcaggaagtgcccacttcttgg 8491 Query: 246 gcaagggaccaatgtcatatatgatctccctgtggcaagaccagacgagtttgatggctt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8490 gcaagggaccaatgtcatatatgatctccctgtggcaagaccagacgagtttgatggctt 8431 Query: 306 ctggagtgccaatccccgcgcctcttgggtcaccggcaggaccaaacc 353 |||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 8430 ctggagtgccgatccccgcgcctctcgggtcaccggcaggaccaaacc 8383 Score = 172 bits (87), Expect = 9e-40 Identities = 108/115 (93%) Strand = Plus / Minus Query: 432 cctgcaggaataatttgtcgtttgaaactactgcagctgtcagatgcgcattcatcctct 491 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 8010 cctgcaggaacaatttgtcgtttgaaactactgcagctgtcagatgcgcattcatccttt 7951 Query: 492 cgcaggcttctaataccaattcaagttgatcctcggagtattctgtaaccacctg 546 |||||||||||||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 7950 cgcaggcttctaatactaaatcaagctgttcctcagagtattctgtaaccacctg 7896 Score = 131 bits (66), Expect = 3e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 542 acctggaaaggaccaaatatctccttcgtcacaagctcaaagttatcgctttttagaatc 601 |||||||||||||||||||||||||| ||||||||||| |||||| | |||| || ||| Sbjct: 7484 acctggaaaggaccaaatatctcctttgtcacaagctcgaagttaccatttttaaggatc 7425 Query: 602 tccactagtgggacaaacacagcagtaggcttgaaggcaccatatatttc 651 ||||||||||||||||| |||||||| || ||||| |||||||||||||| Sbjct: 7424 tccactagtgggacaaatacagcagtcggtttgaaagcaccatatatttc 7375 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 351 accagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtcgtaccgt 410 ||||||||||||| |||||||| ||||||||||||||||||||||||||||| || |||| Sbjct: 8297 accagtggttctgcggagcgccggtggtccttgctcgaattccagcatacgttgtcccgt 8238 Query: 411 taactgatttcccgagtacttcctg 435 |||| ||| | |||||||||||||| Sbjct: 8237 taaccgatctaccgagtacttcctg 8213
>gb|DQ154922.1| Aegilops tauschii delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, exon 14 and partial cds Length = 350 Score = 325 bits (164), Expect = 1e-85 Identities = 309/352 (87%), Gaps = 9/352 (2%) Strand = Plus / Minus Query: 28 tcgtggtactccattcataattatgacctttactttgttcttgggagtcgagnattctcc 87 |||| |||||||||||||||||| |||||||| | ||||| | || ||| || | ||||| Sbjct: 350 tcgtagtactccattcataattacgacctttattgtgttccttggggtccag-actctcc 292 Query: 88 caatt-gcctacacggggcttccattattcaacacaacacggtaccagtcctcgaccagc 146 ||||| ||||||||| |||||||||||||||||||||||| | |||| ||| |||||| Sbjct: 291 caatttgcctacacgaggcttccattattcaacacaacacactgtcagttctcaaccagc 232 Query: 147 taattcggtccgtgtagccttcttctccatcaacag-cgtgttcttctagctagccgtcc 205 |||||| |||||||| || |||| ||||||| ||| ||||||||||||||||| |||| Sbjct: 231 taattctgtccgtgttgctttct-ctccatcgccagtcgtgttcttctagctagttgtcc 173 Query: 206 tagac-----atatcatgtagccgaaggaagtgcccagttcttgggcaagggaccaatgt 260 ||| | |||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 172 tagcctaggcatatcatgtagccgcaggaagtgcccacttcttgggcaaggggccaatgt 113 Query: 261 catatatgatctccctgtggcaagaccagacgagtttgatggcttctggagtgccaatcc 320 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 112 catatatgatctccctgtggcacgaccagacgagtttgatggcttctggagtgccgatcc 53 Query: 321 ccgcgcctcttgggtcaccggcaggaccaaaccagtggttctgtggagcgcc 372 | |||||||||||||| || |||||||||||||| |||||||| |||||||| Sbjct: 52 ctgcgcctcttgggtcgcccgcaggaccaaaccaatggttctgcggagcgcc 1
>gb|DQ154919.1| Triticum aestivum B genome delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, exons 14, 15 and partial cds Length = 439 Score = 325 bits (164), Expect = 1e-85 Identities = 291/328 (88%), Gaps = 9/328 (2%) Strand = Plus / Minus Query: 33 gtactccattcataattatgacctttactttgttcttgggagtcgagnattctcccaatt 92 |||||||||||||||||| |||||||| | ||||| | || ||| || | |||||||||| Sbjct: 433 gtactccattcataattacgacctttattgtgttccttggggtccag-actctcccaatt 375 Query: 93 -gcctacacggggcttccattattcaacacaacacggtaccagtcctcgaccagctaatt 151 ||||||||| |||||||||||||||||||||||| | |||| ||| ||||||||||| Sbjct: 374 tgcctacacgaggcttccattattcaacacaacacactgtcagttctcaaccagctaatt 315 Query: 152 cggtccgtgtagccttcttctccatcaacag-cgtgttcttctagctagccgtcctagac 210 | |||||||| || |||| ||||||| ||| ||||||||||||||||| ||||||| | Sbjct: 314 ctgtccgtgttgctttct-ctccatcgccagtcgtgttcttctagctagttgtcctagcc 256 Query: 211 -----atatcatgtagccgaaggaagtgcccagttcttgggcaagggaccaatgtcatat 265 |||||||||||||| |||||||||||| |||||||||||||| |||||||||||| Sbjct: 255 taggcatatcatgtagccgcaggaagtgcccacttcttgggcaaggggccaatgtcatat 196 Query: 266 atgatctccctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcg 325 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 195 atgatctccctgtggcaagaccagacgagtttgatggcttctggagtgccgatccccgcg 136 Query: 326 cctcttgggtcaccggcaggaccaaacc 353 ||||| |||||||||||||||||||||| Sbjct: 135 cctctcgggtcaccggcaggaccaaacc 108
>gb|DQ154918.1| Triticum monococcum delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, exons 14, 15 and partial cds Length = 433 Score = 323 bits (163), Expect = 4e-85 Identities = 286/323 (88%), Gaps = 13/323 (4%) Strand = Plus / Minus Query: 37 tccattcataattatgacctttactttgttc-ttgggagtcgagnattctcccaattgcc 95 ||||||||||||||||||||||| | ||||| ||||| |||||| | ||||||||||||| Sbjct: 423 tccattcataattatgacctttattgtgttccttgggggtcgag-actctcccaattgcc 365 Query: 96 tacacggggcttccattattcaacacaacacggtaccagtcctcgaccagctaattcggt 155 |||||| ||||||||||||||||||||| | |||| ||| ||||||||||| || Sbjct: 364 tacacgaggcttccattattcaacacaa-----tgtcagttctcaaccagctaattgtgt 310 Query: 156 ccgtgtagccttcttctccatcaacagcgtgttcttctagctagccgtcctagac----- 210 |||||| || |||| ||||||| | ||||||||||||||||| ||||||| | Sbjct: 309 ccgtgttgctttct-ctccatcgccgtcgtgttcttctagctagttgtcctagcctaggc 251 Query: 211 atatcatgtagccgaaggaagtgcccagttcttgggcaagggaccaatgtcatatatgat 270 |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 250 atatcatgtagccgcaggaagtgcccacttcttgggcaagggaccaatgtcatatatgat 191 Query: 271 ctccctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctct 330 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 190 ctccctgtggcaagaccagacgagtttgatggcttctggagtgccgatccccgcgcctct 131 Query: 331 tgggtcaccggcaggaccaaacc 353 |||||||||||||||||||||| Sbjct: 130 cgggtcaccggcaggaccaaacc 108 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 351 accagtggttctgtggagcgcc 372 |||||||||||||||||||||| Sbjct: 22 accagtggttctgtggagcgcc 1
>gb|DQ154917.1| Triticum turgidum B genome delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, exons 14, 15 and partial cds Length = 433 Score = 323 bits (163), Expect = 4e-85 Identities = 286/323 (88%), Gaps = 13/323 (4%) Strand = Plus / Minus Query: 37 tccattcataattatgacctttactttgttctt-gggagtcgagnattctcccaattgcc 95 ||||||||||||||||||||||| | ||||| | ||| |||||| | ||||||||||||| Sbjct: 423 tccattcataattatgacctttattgtgttcctagggggtcgag-actctcccaattgcc 365 Query: 96 tacacggggcttccattattcaacacaacacggtaccagtcctcgaccagctaattcggt 155 |||||| ||||||||||||||||||||| | |||| ||| |||||||||||| || Sbjct: 364 tacacgaggcttccattattcaacacaa-----tgtcagttctcaaccagctaattctgt 310 Query: 156 ccgtgtagccttcttctccatcaacagcgtgttcttctagctagccgtcctaga-----c 210 |||||| || |||| ||||||| | ||||||||||||||||| ||||||| | Sbjct: 309 ccgtgttgctttct-ctccatcgccgtcgtgttcttctagctagttgtcctagcttaggc 251 Query: 211 atatcatgtagccgaaggaagtgcccagttcttgggcaagggaccaatgtcatatatgat 270 |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 250 atatcatgtagccgcaggaagtgcccacttcttgggcaagggaccaatgtcatatatgat 191 Query: 271 ctccctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctct 330 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 190 ctccctgtggcaagaccagacgagtttgatggcttctggagtgccgatccccgcgcctct 131 Query: 331 tgggtcaccggcaggaccaaacc 353 |||||||||||||||||||||| Sbjct: 130 cgggtcaccggcaggaccaaacc 108
>gb|DQ154921.1| Aegilops tauschii delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, exons 14, 15 and partial cds Length = 428 Score = 303 bits (153), Expect = 4e-79 Identities = 292/333 (87%), Gaps = 9/333 (2%) Strand = Plus / Minus Query: 28 tcgtggtactccattcataattatgacctttactttgttcttgggagtcgagnattctcc 87 |||| |||||||||||||||||| |||||||| | ||||| | || ||| || | ||||| Sbjct: 428 tcgtagtactccattcataattacgacctttattgtgttccttggggtccag-actctcc 370 Query: 88 caatt-gcctacacggggcttccattattcaacacaacacggtaccagtcctcgaccagc 146 ||||| ||||||||| |||||||||||||||||||||||| | |||| ||| |||||| Sbjct: 369 caatttgcctacacgaggcttccattattcaacacaacacactgtcagttctcaaccagc 310 Query: 147 taattcggtccgtgtagccttcttctccatcaacag-cgtgttcttctagctagccgtcc 205 |||||| |||||||| || |||| ||||||| ||| ||||||||||||||||| |||| Sbjct: 309 taattctgtccgtgttgctttct-ctccatcgccagtcgtgttcttctagctagttgtcc 251 Query: 206 tagac-----atatcatgtagccgaaggaagtgcccagttcttgggcaagggaccaatgt 260 ||| | |||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 250 tagcctaggcatatcatgtagccgcaggaagtgcccacttcttgggcaaggggccaatgt 191 Query: 261 catatatgatctccctgtggcaagaccagacgagtttgatggcttctggagtgccaatcc 320 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 190 catatatgatctccctgtggcacgaccagacgagtttgatggcttctggagtgccgatcc 131 Query: 321 ccgcgcctcttgggtcaccggcaggaccaaacc 353 | |||||||||||||| || ||||||||||||| Sbjct: 130 ctgcgcctcttgggtcgcccgcaggaccaaacc 98
>gb|DQ154920.1| Triticum aestivum D genome delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, exons 14, 15 and partial cds Length = 428 Score = 303 bits (153), Expect = 4e-79 Identities = 292/333 (87%), Gaps = 9/333 (2%) Strand = Plus / Minus Query: 28 tcgtggtactccattcataattatgacctttactttgttcttgggagtcgagnattctcc 87 |||| |||||||||||||||||| |||||||| | ||||| | || ||| || | ||||| Sbjct: 428 tcgtagtactccattcataattacgacctttattgtgttccttggggtccag-actctcc 370 Query: 88 caatt-gcctacacggggcttccattattcaacacaacacggtaccagtcctcgaccagc 146 ||||| ||||||||| |||||||||||||||||||||||| | |||| ||| |||||| Sbjct: 369 caatttgcctacacgaggcttccattattcaacacaacacactgtcagttctcaaccagc 310 Query: 147 taattcggtccgtgtagccttcttctccatcaacag-cgtgttcttctagctagccgtcc 205 |||||| |||||||| || |||| ||||||| ||| ||||||||||||||||| |||| Sbjct: 309 taattctgtccgtgttgctttct-ctccatcgccagtcgtgttcttctagctagttgtcc 251 Query: 206 tagac-----atatcatgtagccgaaggaagtgcccagttcttgggcaagggaccaatgt 260 ||| | |||||||||||||| |||||||||||| |||||||||||||| ||||||| Sbjct: 250 tagcctaggcatatcatgtagccgcaggaagtgcccacttcttgggcaaggggccaatgt 191 Query: 261 catatatgatctccctgtggcaagaccagacgagtttgatggcttctggagtgccaatcc 320 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 190 catatatgatctccctgtggcacgaccagacgagtttgatggcttctggagtgccgatcc 131 Query: 321 ccgcgcctcttgggtcaccggcaggaccaaacc 353 | |||||||||||||| || ||||||||||||| Sbjct: 130 ctgcgcctcttgggtcgcccgcaggaccaaacc 98
>gb|DQ154916.1| Triticum turgidum A genome delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, exons 14, 15 and partial cds Length = 432 Score = 252 bits (127), Expect = 1e-63 Identities = 160/171 (93%) Strand = Plus / Minus Query: 183 cgtgttcttctagctagccgtcctagacatatcatgtagccgaaggaagtgcccagttct 242 ||||||||||||||||| ||||||| ||||||||||||||| |||||||||||| |||| Sbjct: 278 cgtgttcttctagctagttgtcctaggcatatcatgtagccgcaggaagtgcccacttct 219 Query: 243 tgggcaagggaccaatgtcatatatgatctccctgtggcaagaccagacgagtttgatgg 302 | |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 218 taggcaggggaccaatgtcgtatatgatctccctgtggcaagaccagacgagtttgatgg 159 Query: 303 cttctggagtgccaatccccgcgcctcttgggtcaccggcaggaccaaacc 353 ||||||||||||| |||||||||||||| |||||||| ||||||||||||| Sbjct: 158 cttctggagtgccgatccccgcgcctctcgggtcacccgcaggaccaaacc 108 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/85 (88%), Gaps = 3/85 (3%) Strand = Plus / Minus Query: 37 tccattcataattatgacctttactttgttc-ttgggagtcgagnattctcccaattgcc 95 ||||||||||||||||||||||| | ||||| ||||| ||| || | |||||||| ||| Sbjct: 422 tccattcataattatgacctttattgtgttccttgggggtcaag-accctcccaat-gcc 365 Query: 96 tacacggggcttccattattcaaca 120 |||||| |||||||||||||||||| Sbjct: 364 tacacgaggcttccattattcaaca 340
>gb|DQ154915.1| Triticum aestivum A genome delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, exons 14, 15 and partial cds Length = 431 Score = 252 bits (127), Expect = 1e-63 Identities = 160/171 (93%) Strand = Plus / Minus Query: 183 cgtgttcttctagctagccgtcctagacatatcatgtagccgaaggaagtgcccagttct 242 ||||||||||||||||| ||||||| ||||||||||||||| |||||||||||| |||| Sbjct: 278 cgtgttcttctagctagttgtcctaggcatatcatgtagccgcaggaagtgcccacttct 219 Query: 243 tgggcaagggaccaatgtcatatatgatctccctgtggcaagaccagacgagtttgatgg 302 | |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 218 taggcaggggaccaatgtcgtatatgatctccctgtggcaagaccagacgagtttgatgg 159 Query: 303 cttctggagtgccaatccccgcgcctcttgggtcaccggcaggaccaaacc 353 ||||||||||||| |||||||||||||| |||||||| ||||||||||||| Sbjct: 158 cttctggagtgccgatccccgcgcctctcgggtcacccgcaggaccaaacc 108 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/85 (87%), Gaps = 3/85 (3%) Strand = Plus / Minus Query: 37 tccattcataattatgacctttactttgttc-ttgggagtcgagnattctcccaattgcc 95 |||||| |||||||||||||||| | ||||| ||||| ||| || | |||||||| ||| Sbjct: 421 tccatttataattatgacctttattgtgttccttgggggtcaag-accctcccaat-gcc 364 Query: 96 tacacggggcttccattattcaaca 120 |||||| |||||||||||||||||| Sbjct: 363 tacacgaggcttccattattcaaca 339
>ref|XM_475772.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1542 Score = 238 bits (120), Expect = 2e-59 Identities = 195/220 (88%) Strand = Plus / Minus Query: 216 atgtagccgaaggaagtgcccagttcttgggcaagggaccaatgtcatatatgatctccc 275 ||||||| ||||| ||||||| |||||| |||||||| |||||||||||||||||||||| Sbjct: 1540 atgtagcggaaggtagtgcccggttcttaggcaaggggccaatgtcatatatgatctccc 1481 Query: 276 tgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttgggt 335 ||||||||||||| |||||||| |||||||||||||| || ||||| || |||||||| | Sbjct: 1480 tgtggcaagaccaaacgagtttaatggcttctggagttccgatccctgcacctcttggat 1421 Query: 336 caccggcaggaccaaaccagtggttctgtggagcgccagtggtccttgctcgaattccag 395 |||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| || || | Sbjct: 1420 caccagcaggcccaaaccagtggttctgtggagcaccagttgtccttgctcggatgccgg 1361 Query: 396 catacgtcgtaccgttaactgatttcccgagtacttcctg 435 |||| || || |||||||||||| ||| ||||||||||| Sbjct: 1360 catatgttgtcccgttaactgatcgcccaagtacttcctg 1321 Score = 81.8 bits (41), Expect = 3e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 543 cctggaaaggaccaaatatctccttcgtcacaagctcaaagttatcgctttttagaatct 602 |||||||||||||||| |||||| | |||||||||||||| || | ||||| || || | Sbjct: 1324 cctggaaaggaccaaagatctcccttgtcacaagctcaaaattgccacttttaaggattt 1265 Query: 603 ccactagtgggacaaacacagcagtaggcttgaaggcaccatatatttc 651 || ||| || ||||| |||||||| || |||||||||||||||||||| Sbjct: 1264 ccgatagaggaacaaatacagcagttggtttgaaggcaccatatatttc 1216
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 163 bits (82), Expect = 9e-37 Identities = 124/138 (89%) Strand = Plus / Plus Query: 216 atgtagccgaaggaagtgcccagttcttgggcaagggaccaatgtcatatatgatctccc 275 ||||||| ||||| ||||||| |||||| |||||||| |||||||||||||||||||||| Sbjct: 72907 atgtagcggaaggtagtgcccggttcttaggcaaggggccaatgtcatatatgatctccc 72966 Query: 276 tgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttgggt 335 ||||||||||||| |||||||| |||||||||||||| || ||||| || |||||||| | Sbjct: 72967 tgtggcaagaccaaacgagtttaatggcttctggagttccgatccctgcacctcttggat 73026 Query: 336 caccggcaggaccaaacc 353 |||| ||||| ||||||| Sbjct: 73027 caccagcaggcccaaacc 73044 Score = 85.7 bits (43), Expect = 2e-13 Identities = 98/115 (85%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 432 cctgcaggaataatttgtcgtttgaaactactgcagctgtcagatgcgcattcatcctct 491 ||||||||||||| |||||||||||| |||||||| ||||||| || |||||||| | Sbjct: 73415 cctgcaggaataaagggtcgtttgaaacaactgcagccgtcagata-gcgttcatccttt 73473 Query: 492 cgcaggcttctaataccaattcaagttgatcctcggagtattctgtaaccacctg 546 | |||||||||||||| |||||||| | ||| || || || |||||||||||||| Sbjct: 73474 cacaggcttctaatactaattcaagctcatcatcagaatactctgtaaccacctg 73528 Score = 83.8 bits (42), Expect = 7e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 542 acctggaaaggaccaaatatctccttcgtcacaagctcaaagttatcgctttttagaatc 601 ||||||||||||||||| |||||| | |||||||||||||| || | ||||| || || Sbjct: 73791 acctggaaaggaccaaagatctcccttgtcacaagctcaaaattgccacttttaaggatt 73850 Query: 602 tccactagtgggacaaacacagcagtaggcttgaaggcaccatatatttc 651 ||| ||| || ||||| |||||||| || |||||||||||||||||||| Sbjct: 73851 tccgatagaggaacaaatacagcagttggtttgaaggcaccatatatttc 73900 Score = 81.8 bits (41), Expect = 3e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 351 accagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtcgtaccgt 410 ||||||||||||||||||| ||||| ||||||||||| || || ||||| || || |||| Sbjct: 73128 accagtggttctgtggagcaccagttgtccttgctcggatgccggcatatgttgtcccgt 73187 Query: 411 taactgatttcccgagtacttcctg 435 |||||||| ||| ||||||||||| Sbjct: 73188 taactgatcgcccaagtacttcctg 73212
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 163 bits (82), Expect = 9e-37 Identities = 124/138 (89%) Strand = Plus / Plus Query: 216 atgtagccgaaggaagtgcccagttcttgggcaagggaccaatgtcatatatgatctccc 275 ||||||| ||||| ||||||| |||||| |||||||| |||||||||||||||||||||| Sbjct: 26428216 atgtagcggaaggtagtgcccggttcttaggcaaggggccaatgtcatatatgatctccc 26428275 Query: 276 tgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttgggt 335 ||||||||||||| |||||||| |||||||||||||| || ||||| || |||||||| | Sbjct: 26428276 tgtggcaagaccaaacgagtttaatggcttctggagttccgatccctgcacctcttggat 26428335 Query: 336 caccggcaggaccaaacc 353 |||| ||||| ||||||| Sbjct: 26428336 caccagcaggcccaaacc 26428353 Score = 85.7 bits (43), Expect = 2e-13 Identities = 98/115 (85%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 432 cctgcaggaataatttgtcgtttgaaactactgcagctgtcagatgcgcattcatcctct 491 ||||||||||||| |||||||||||| |||||||| ||||||| || |||||||| | Sbjct: 26428724 cctgcaggaataaagggtcgtttgaaacaactgcagccgtcagata-gcgttcatccttt 26428782 Query: 492 cgcaggcttctaataccaattcaagttgatcctcggagtattctgtaaccacctg 546 | |||||||||||||| |||||||| | ||| || || || |||||||||||||| Sbjct: 26428783 cacaggcttctaatactaattcaagctcatcatcagaatactctgtaaccacctg 26428837 Score = 83.8 bits (42), Expect = 7e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 542 acctggaaaggaccaaatatctccttcgtcacaagctcaaagttatcgctttttagaatc 601 ||||||||||||||||| |||||| | |||||||||||||| || | ||||| || || Sbjct: 26429100 acctggaaaggaccaaagatctcccttgtcacaagctcaaaattgccacttttaaggatt 26429159 Query: 602 tccactagtgggacaaacacagcagtaggcttgaaggcaccatatatttc 651 ||| ||| || ||||| |||||||| || |||||||||||||||||||| Sbjct: 26429160 tccgatagaggaacaaatacagcagttggtttgaaggcaccatatatttc 26429209 Score = 81.8 bits (41), Expect = 3e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 351 accagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtcgtaccgt 410 ||||||||||||||||||| ||||| ||||||||||| || || ||||| || || |||| Sbjct: 26428437 accagtggttctgtggagcaccagttgtccttgctcggatgccggcatatgttgtcccgt 26428496 Query: 411 taactgatttcccgagtacttcctg 435 |||||||| ||| ||||||||||| Sbjct: 26428497 taactgatcgcccaagtacttcctg 26428521
>gb|AF467541.1| Zea mays putative aldehyde dehydrogenase MIS1 (mis1) gene, complete cds Length = 11504 Score = 127 bits (64), Expect = 5e-26 Identities = 91/100 (91%) Strand = Plus / Minus Query: 448 gtcgtttgaaactactgcagctgtcagatgcgcattcatcctctcgcaggcttctaatac 507 ||||||||| || ||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 10106 gtcgtttgagacaactgcagctgtcagatgcgcattcatcctttcgcaggcttctaagac 10047 Query: 508 caattcaagttgatcctcggagtattctgtaaccacctgg 547 ||| ||||| |||||||| ||||||||||| || |||||| Sbjct: 10046 caactcaagctgatcctcagagtattctgtgactacctgg 10007 Score = 99.6 bits (50), Expect = 1e-17 Identities = 110/130 (84%) Strand = Plus / Minus Query: 224 gaaggaagtgcccagttcttgggcaagggaccaatgtcatatatgatctccctgtggcaa 283 |||||||| |||||| ||| ||||| ||| || | ||||||||||| ||||||||||| Sbjct: 10612 gaaggaagcgcccagctctcgggcacgggcccgacgtcatatatgacttccctgtggcag 10553 Query: 284 gaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttgggtcaccggca 343 |||||||| |||||||||||||| ||||| || ||||| ||||||| || |||||||| Sbjct: 10552 gaccagacaagtttgatggcttccggagtcccgatccctgcgcctcgcggatcaccggcc 10493 Query: 344 ggaccaaacc 353 || ||||||| Sbjct: 10492 gggccaaacc 10483 Score = 97.6 bits (49), Expect = 4e-17 Identities = 94/109 (86%) Strand = Plus / Minus Query: 542 acctggaaaggaccaaatatctccttcgtcacaagctcaaagttatcgctttttagaatc 601 |||||||| ||||||||||||||||| ||||||||||| ||||| | ||||||||||| Sbjct: 8803 acctggaatggaccaaatatctcctttgtcacaagctcgaagttcccactttttagaatt 8744 Query: 602 tccactagtgggacaaacacagcagtaggcttgaaggcaccatatattt 650 || |||| || ||||| |||||||||||||| | ||||||||| |||| Sbjct: 8743 tcttctagaggaacaaatacagcagtaggcttcatggcaccataaattt 8695 Score = 81.8 bits (41), Expect = 3e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 351 accagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtcgtaccgt 410 |||||||||||||||||||||| |||||||| ||||||||||| || || || || |||| Sbjct: 10381 accagtggttctgtggagcgcccgtggtcctcgctcgaattccggcgtaggttgtcccgt 10322 Query: 411 taactgatttcccgagtacttcctg 435 |||| ||| |||| ||||| ||||| Sbjct: 10321 taacggatctcccaagtacatcctg 10297
>gb|BT014577.1| Lycopersicon esculentum clone 134032F, mRNA sequence Length = 2510 Score = 105 bits (53), Expect = 2e-19 Identities = 143/173 (82%) Strand = Plus / Minus Query: 245 ggcaagggaccaatgtcatatatgatctccctgtggcaagaccagacgagtttgatggct 304 |||| |||||||| ||||| ||||| || |||||||||||||| || ||||| || ||| Sbjct: 2252 ggcatgggaccaacatcatagatgatttctctgtggcaagaccatacaagtttaatagct 2193 Query: 305 tctggagtgccaatccccgcgcctcttgggtcaccggcaggaccaaaccagtggttctgt 364 |||||||| || || || || ||||| ||||| |||||||||||||||||||| ||||| Sbjct: 2192 tctggagtacctattccggctcctctggggtccccggcaggaccaaaccagtgattctgg 2133 Query: 365 ggagcgccagtggtccttgctcgaattccagcatacgtcgtaccgttaactga 417 ||||| || || || ||||||| | ||||||||| || || || |||||||| Sbjct: 2132 ggagcccctgttgttcttgctctcaatccagcataagtggttccattaactga 2080
>emb|X86733.1|LUHFIS1GE L.usitatissimum mRNA for fis1 protein Length = 1856 Score = 83.8 bits (42), Expect = 7e-13 Identities = 102/122 (83%) Strand = Plus / Minus Query: 266 atgatctccctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcg 325 |||||||| | ||||||||||||||| ||||| ||||||||||| || |||||||| || Sbjct: 1660 atgatctctcggtggcaagaccagacaagtttaatggcttctggtgttccaatccctgca 1601 Query: 326 cctcttgggtcaccggcaggaccaaaccagtggttctgtggagcgccagtggtccttgct 385 ||||| ||||| || || || |||||||| || ||||| ||||| || || || |||||| Sbjct: 1600 cctctcgggtctccagctggtccaaaccaatgattctgcggagctcctgtcgttcttgct 1541 Query: 386 cg 387 || Sbjct: 1540 cg 1539
>gb|AC122726.21| Medicago truncatula clone mth2-23o24, complete sequence Length = 130999 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 260 tcatatatgatctccctgtggcaagaccagacgagtttgatggcttctggagtgccaatc 319 ||||| || ||||| || ||||||||||| || ||||| || || ||||| || |||||| Sbjct: 33619 tcataaattatctctctatggcaagaccatacaagttttatagcctctggtgttccaatc 33678 Query: 320 cccgcgcctcttgggtcaccggcaggaccaaacc 353 || || ||||| ||||||||||| || ||||||| Sbjct: 33679 cctgcacctctggggtcaccggctggtccaaacc 33712 Score = 46.1 bits (23), Expect = 0.14 Identities = 71/87 (81%) Strand = Plus / Plus Query: 351 accagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtcgtaccgt 410 ||||||| || |||||||| ||||| |||||||||| | |||||||| || || || | Sbjct: 33809 accagtgattttgtggagctccagttgtccttgctcttagaccagcataagtagtgccat 33868 Query: 411 taactgatttcccgagtacttcctgca 437 | ||||||||||| | |||||||||| Sbjct: 33869 ttactgatttcccaatcacttcctgca 33895
>ref|NM_125647.2| Arabidopsis thaliana ALDH12A1; 1-pyrroline-5-carboxylate dehydrogenase/ aldehyde dehydrogenase AT5G62530 (ALDH12A1) mRNA, complete cds Length = 2527 Score = 58.0 bits (29), Expect = 4e-05 Identities = 128/161 (79%) Strand = Plus / Minus Query: 275 ctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttggg 334 |||||||| ||||| || || || || || ||||| || || ||||| || ||||| ||| Sbjct: 1701 ctgtggcatgaccaaaccagctttatagcctctggtgtccctatcccggcccctctcggg 1642 Query: 335 tcaccggcaggaccaaaccagtggttctgtggagcgccagtggtccttgctcgaattcca 394 || || ||||| ||||||||||| ||||| ||||| ||||| || ||| ||| | |||| Sbjct: 1641 tcccccgcaggtccaaaccagtgattctgaggagctccagttgttcttcctcttagtcca 1582 Query: 395 gcatacgtcgtaccgttaactgatttcccgagtacttcctg 435 ||||| || || || || ||||| ||||| | ||||||||| Sbjct: 1581 gcatatgtagtcccattcactgagttccctattacttcctg 1541
>gb|BT010391.1| Arabidopsis thaliana At5g62530 mRNA, complete cds Length = 1671 Score = 58.0 bits (29), Expect = 4e-05 Identities = 128/161 (79%) Strand = Plus / Minus Query: 275 ctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttggg 334 |||||||| ||||| || || || || || ||||| || || ||||| || ||||| ||| Sbjct: 1610 ctgtggcatgaccaaaccagctttatagcctctggtgtccctatcccggcccctctcggg 1551 Query: 335 tcaccggcaggaccaaaccagtggttctgtggagcgccagtggtccttgctcgaattcca 394 || || ||||| ||||||||||| ||||| ||||| ||||| || ||| ||| | |||| Sbjct: 1550 tcccccgcaggtccaaaccagtgattctgaggagctccagttgttcttcctcttagtcca 1491 Query: 395 gcatacgtcgtaccgttaactgatttcccgagtacttcctg 435 ||||| || || || || ||||| ||||| | ||||||||| Sbjct: 1490 gcatatgtagtcccattcactgagttccctattacttcctg 1450
>gb|BT000746.1| Arabidopsis thaliana clone RAFL09-76-E19 (R19425) putative dehydrogenase (At5g62530) mRNA, complete cds Length = 2024 Score = 58.0 bits (29), Expect = 4e-05 Identities = 128/161 (79%) Strand = Plus / Minus Query: 275 ctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttggg 334 |||||||| ||||| || || || || || ||||| || || ||||| || ||||| ||| Sbjct: 1693 ctgtggcatgaccaaaccagctttatagcctctggtgtccctatcccggcccctctcggg 1634 Query: 335 tcaccggcaggaccaaaccagtggttctgtggagcgccagtggtccttgctcgaattcca 394 || || ||||| ||||||||||| ||||| ||||| ||||| || ||| ||| | |||| Sbjct: 1633 tcccccgcaggtccaaaccagtgattctgaggagctccagttgttcttcctcttagtcca 1574 Query: 395 gcatacgtcgtaccgttaactgatttcccgagtacttcctg 435 ||||| || || || || ||||| ||||| | ||||||||| Sbjct: 1573 gcatatgtagtcccattcactgagttccctattacttcctg 1533
>gb|AY065072.1| Arabidopsis thaliana dehydrogenase (K19B1.14) mRNA, complete cds Length = 1975 Score = 58.0 bits (29), Expect = 4e-05 Identities = 128/161 (79%) Strand = Plus / Minus Query: 275 ctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttggg 334 |||||||| ||||| || || || || || ||||| || || ||||| || ||||| ||| Sbjct: 1660 ctgtggcatgaccaaaccagctttatagcctctggtgtccctatcccggcccctctcggg 1601 Query: 335 tcaccggcaggaccaaaccagtggttctgtggagcgccagtggtccttgctcgaattcca 394 || || ||||| ||||||||||| ||||| ||||| ||||| || ||| ||| | |||| Sbjct: 1600 tcccccgcaggtccaaaccagtgattctgaggagctccagttgttcttcctcttagtcca 1541 Query: 395 gcatacgtcgtaccgttaactgatttcccgagtacttcctg 435 ||||| || || || || ||||| ||||| | ||||||||| Sbjct: 1540 gcatatgtagtcccattcactgagttccctattacttcctg 1500
>emb|BX832270.1|CNS0A0Z3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZC06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 795 Score = 58.0 bits (29), Expect = 4e-05 Identities = 128/161 (79%) Strand = Plus / Minus Query: 275 ctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttggg 334 |||||||| ||||| || || || || || ||||| || || ||||| || ||||| ||| Sbjct: 455 ctgtggcatgaccaaaccagctttatagcctctggtgtccctatcccggcccctctcggg 396 Query: 335 tcaccggcaggaccaaaccagtggttctgtggagcgccagtggtccttgctcgaattcca 394 || || ||||| ||||||||||| ||||| ||||| ||||| || ||| ||| | |||| Sbjct: 395 tcccccgcaggtccaaaccagtgattctgaggagctccagttgttcttcctcttagtcca 336 Query: 395 gcatacgtcgtaccgttaactgatttcccgagtacttcctg 435 ||||| || || || || ||||| ||||| | ||||||||| Sbjct: 335 gcatatgtagtcccattcactgagttccctattacttcctg 295
>dbj|AP006364.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT28B04, TM0170, complete sequence Length = 101172 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 275 ctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttggg 334 ||||| |||||||| || ||||| ||||||||||| || ||||| || || || || ||| Sbjct: 94800 ctgtgacaagaccacactagttttatggcttctggtgttccaattcctgcacccctaggg 94859 Query: 335 tcaccggcaggaccaaacc 353 ||||| ||||| ||||||| Sbjct: 94860 tcacccgcaggtccaaacc 94878 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Plus Query: 351 accagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtcgtaccgt 410 ||||||| ||||||||||| ||||| || ||||||| | |||||||| || ||||| | Sbjct: 94958 accagtgattctgtggagctccagttgttcttgctcttagaccagcataagtagtaccat 95017 Query: 411 taactgatttcccgagtacttcctg 435 | |||||||| || | ||||||||| Sbjct: 95018 tgactgatttgccaattacttcctg 95042
>gb|AY039787.1| Arabidopsis thaliana delta-1-pyrroline-5-carboxylate dehydrogenase precursor (P5CDH) mRNA, complete cds; nuclear gene for mitochondrial product Length = 2025 Score = 50.1 bits (25), Expect = 0.009 Identities = 82/101 (81%) Strand = Plus / Minus Query: 275 ctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttggg 334 |||||||| ||||| || || || || || ||||| || || ||||| || ||||| ||| Sbjct: 1697 ctgtggcatgaccaaaccagctttatagcctctggtgtccctatcccggcccctctcggg 1638 Query: 335 tcaccggcaggaccaaaccagtggttctgtggagcgccagt 375 || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1637 tcccccgcaggtccaaaccagtgattctgaggagctccagt 1597
>ref|XM_964439.1| PREDICTED: Tribolium castaneum similar to PI-3-kinase-related kinase SMG-1 (LOC658025), mRNA Length = 10143 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 280 gcaagaccagacgagtttgatgg 302 ||||||||||||||||||||||| Sbjct: 1920 gcaagaccagacgagtttgatgg 1942
>ref|XM_642656.1| Dictyostelium discoideum hypothetical protein (DDB0216478), partial mRNA Length = 1008 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 cttctaataccaattcaagt 517 |||||||||||||||||||| Sbjct: 155 cttctaataccaattcaagt 174
>ref|XM_634296.1| Dictyostelium discoideum hypothetical protein (DDB0218416), partial mRNA Length = 720 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 cttctaataccaattcaagt 517 |||||||||||||||||||| Sbjct: 155 cttctaataccaattcaagt 174
>ref|XM_628807.1| Dictyostelium discoideum hypothetical protein (DDB0215083), partial mRNA Length = 1673 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 cttctaataccaattcaagt 517 |||||||||||||||||||| Sbjct: 155 cttctaataccaattcaagt 174
>ref|XM_628729.1| Dictyostelium discoideum hypothetical protein (DDB0215159), partial mRNA Length = 720 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 cttctaataccaattcaagt 517 |||||||||||||||||||| Sbjct: 155 cttctaataccaattcaagt 174
>gb|AC170423.1| Rhesus Macaque BAC CH250-107D17 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 167419 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 tacttcctgcaggaataatt 446 |||||||||||||||||||| Sbjct: 151373 tacttcctgcaggaataatt 151354
>emb|AL603841.4| Human DNA sequence from clone RP11-408E1 on chromosome 1 Contains a 35 kDa subunit 1 alpha eukaryotic translation initiation factor 3 (EIF3S1) pseudogene, complete sequence Length = 41617 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 ggcttccattattcaacacaacac 126 |||||||||||||||||| ||||| Sbjct: 38282 ggcttccattattcaacataacac 38305
>emb|BX842656.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 11/11 Length = 307337 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 ttcctgcaggaataatttgt 449 |||||||||||||||||||| Sbjct: 150625 ttcctgcaggaataatttgt 150644
>gb|AC010321.8| Homo sapiens chromosome 16 clone CTD-2540M10, complete sequence Length = 207256 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 gttaactgatttcccgagta 428 |||||||||||||||||||| Sbjct: 176874 gttaactgatttcccgagta 176855
>gb|AC008938.9| Homo sapiens chromosome 16 clone CTD-2313J23, complete sequence Length = 99486 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 gttaactgatttcccgagta 428 |||||||||||||||||||| Sbjct: 40036 gttaactgatttcccgagta 40017
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 tcatgtagccgaaggaagtg 233 |||||||||||||||||||| Sbjct: 1104489 tcatgtagccgaaggaagtg 1104470 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,426,296 Number of Sequences: 3902068 Number of extensions: 4426296 Number of successful extensions: 72110 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 39 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71972 Number of HSP's gapped (non-prelim): 111 length of query: 651 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 628 effective length of database: 17,143,297,704 effective search space: 10765990958112 effective search space used: 10765990958112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
