| Clone Name | rbags6k12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ175904.1| Hordeum vulgare subsp. vulgare clone 28-52A-LB flanking T-DNA insertion sequence Length = 699 Score = 293 bits (148), Expect = 1e-76 Identities = 162/164 (98%), Gaps = 2/164 (1%) Strand = Plus / Plus Query: 46 accacctattgcccggaacgcacaaactataatatgcaaggtctaaacatgnaactttta 105 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 125 accacctattgcccggaacgcacaaactataatatgcaaggtctaaacatg-aactttta 183 Query: 106 aacaaggaaaaattatcgcctggcaccctcaactgaaatttctctagtttttagcaactc 165 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 aacaag-aaaaattatcgcctggcaccctcaactgaaatttctctagtttttagcaactc 242 Query: 166 ccaagcatatgggtcttctaaccaaccagagctaagcagacaag 209 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 ccaagcatatgggtcttctaaccaaccagagctaagcagacaag 286
>emb|X86903.1|TAFKBP70 T.aestivum mRNA for peptidylprolyl cis-trans isomerase, FK506 Length = 2027 Score = 71.9 bits (36), Expect = 7e-10 Identities = 98/114 (85%), Gaps = 5/114 (4%) Strand = Plus / Minus Query: 57 cccggaacgcacaaactataatatgcaa-ggtctaaacatgnaacttt-taaacaaggaa 114 ||||||| ||||| |||||||||||||| |||||||||||| | || | ||||| || Sbjct: 1999 cccggaaagcacacactataatatgcaaaggtctaaacatgcattgttcttgacaagaaa 1940 Query: 115 aaattatcgcctggcaccctcaa--ctgaaatttctctagtttttagcaactcc 166 |||| || |||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 1939 aaat-attgcctggcaacctcaaaactgaaatttctctagtttttagcaactcc 1887
>gb|AC165348.3| Mus musculus BAC clone RP23-300C11 from chromosome 3, complete sequence Length = 198637 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aacttttaaacaaggaaaaa 117 |||||||||||||||||||| Sbjct: 127329 aacttttaaacaaggaaaaa 127310
>emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete genome Length = 1512977 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aacttttaaacaaggaaaaa 117 |||||||||||||||||||| Sbjct: 1419613 aacttttaaacaaggaaaaa 1419632
>emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome Length = 1499920 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aacttttaaacaaggaaaaa 117 |||||||||||||||||||| Sbjct: 1406617 aacttttaaacaaggaaaaa 1406636
>emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, complete genome Length = 1516355 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aacttttaaacaaggaaaaa 117 |||||||||||||||||||| Sbjct: 1441601 aacttttaaacaaggaaaaa 1441620 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,636,176 Number of Sequences: 3902068 Number of extensions: 1636176 Number of successful extensions: 111214 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 111162 Number of HSP's gapped (non-prelim): 49 length of query: 209 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 187 effective length of database: 17,147,199,772 effective search space: 3206526357364 effective search space used: 3206526357364 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)