ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags6k10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY459340.1| Oryza sativa (japonica cultivar-group) clone CL000798.1 R2R3-MYB gene region Length = 12635 Score = 85.7 bits (43), Expect = 2e-13 Identities = 72/81 (88%), Gaps = 3/81 (3%) Strand = Plus / Plus Query: 538 ggagcagccaccgtcggagagctccatcaggtcagcgacctgct---ccgccgcctcgtc 594 |||||||| |||||||||||| ||||| ||||| |||||||||| ||||||||||||| Sbjct: 5078 ggagcagcaaccgtcggagaggtccatgaggtcggcgacctgctccgccgccgcctcgtc 5137 Query: 595 gagaagccacttctcgatcga 615 || ||||||||||||||||| Sbjct: 5138 gaacagccacttctcgatcga 5158
>emb|Y11352.1|OSMYB1308 O.sativa mRNA for myb factor, 1308 bp Length = 1308 Score = 85.7 bits (43), Expect = 2e-13 Identities = 72/81 (88%), Gaps = 3/81 (3%) Strand = Plus / Minus Query: 538 ggagcagccaccgtcggagagctccatcaggtcagcgacctgct---ccgccgcctcgtc 594 |||||||| |||||||||||| ||||| ||||| |||||||||| ||||||||||||| Sbjct: 1032 ggagcagcaaccgtcggagaggtccatgaggtcggcgacctgctccgccgccgcctcgtc 973 Query: 595 gagaagccacttctcgatcga 615 || ||||||||||||||||| Sbjct: 972 gaacagccacttctcgatcga 952
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 85.7 bits (43), Expect = 2e-13 Identities = 72/81 (88%), Gaps = 3/81 (3%) Strand = Plus / Plus Query: 538 ggagcagccaccgtcggagagctccatcaggtcagcgacctgct---ccgccgcctcgtc 594 |||||||| |||||||||||| ||||| ||||| |||||||||| ||||||||||||| Sbjct: 1199806 ggagcagcaaccgtcggagaggtccatgaggtcggcgacctgctccgccgccgcctcgtc 1199865 Query: 595 gagaagccacttctcgatcga 615 || ||||||||||||||||| Sbjct: 1199866 gaacagccacttctcgatcga 1199886
>dbj|AK061437.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B04, full insert sequence Length = 1087 Score = 85.7 bits (43), Expect = 2e-13 Identities = 72/81 (88%), Gaps = 3/81 (3%) Strand = Plus / Minus Query: 538 ggagcagccaccgtcggagagctccatcaggtcagcgacctgct---ccgccgcctcgtc 594 |||||||| |||||||||||| ||||| ||||| |||||||||| ||||||||||||| Sbjct: 1026 ggagcagcaaccgtcggagaggtccatgaggtcggcgacctgctccgccgccgcctcgtc 967 Query: 595 gagaagccacttctcgatcga 615 || ||||||||||||||||| Sbjct: 966 gaacagccacttctcgatcga 946
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 85.7 bits (43), Expect = 2e-13 Identities = 72/81 (88%), Gaps = 3/81 (3%) Strand = Plus / Plus Query: 538 ggagcagccaccgtcggagagctccatcaggtcagcgacctgct---ccgccgcctcgtc 594 |||||||| |||||||||||| ||||| ||||| |||||||||| ||||||||||||| Sbjct: 1199806 ggagcagcaaccgtcggagaggtccatgaggtcggcgacctgctccgccgccgcctcgtc 1199865 Query: 595 gagaagccacttctcgatcga 615 || ||||||||||||||||| Sbjct: 1199866 gaacagccacttctcgatcga 1199886
>emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC OJ1085_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121556 Score = 85.7 bits (43), Expect = 2e-13 Identities = 72/81 (88%), Gaps = 3/81 (3%) Strand = Plus / Minus Query: 538 ggagcagccaccgtcggagagctccatcaggtcagcgacctgct---ccgccgcctcgtc 594 |||||||| |||||||||||| ||||| ||||| |||||||||| ||||||||||||| Sbjct: 92976 ggagcagcaaccgtcggagaggtccatgaggtcggcgacctgctccgccgccgcctcgtc 92917 Query: 595 gagaagccacttctcgatcga 615 || ||||||||||||||||| Sbjct: 92916 gaacagccacttctcgatcga 92896
>dbj|AK106719.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-G05, full insert sequence Length = 1680 Score = 77.8 bits (39), Expect = 5e-11 Identities = 68/77 (88%), Gaps = 3/77 (3%) Strand = Plus / Plus Query: 542 cagccaccgtcggagagctccatcaggtcagcgacctgct---ccgccgcctcgtcgaga 598 |||| |||||||||||| ||||| ||||| |||||||||| ||||||||||||||| Sbjct: 293 cagcaaccgtcggagaggtccatgaggtcggcgacctgctccgccgccgcctcgtcgaac 352 Query: 599 agccacttctcgatcga 615 ||||||||||||||||| Sbjct: 353 agccacttctcgatcga 369
>gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0056E15, complete sequence Length = 147941 Score = 65.9 bits (33), Expect = 2e-07 Identities = 74/87 (85%), Gaps = 3/87 (3%) Strand = Plus / Minus Query: 538 ggagcagccaccgtcggagagctccatcaggtcagcgacctgct---ccgccgcctcgtc 594 |||||||| ||| |||||||| ||||| ||||| || ||||||| ||||||||||||| Sbjct: 71772 ggagcagcaaccatcggagaggtccatgaggtcggcaacctgctccgccgccgcctcgtc 71713 Query: 595 gagaagccacttctcgatcgaacacag 621 || ||||||||||| |||||| |||| Sbjct: 71712 gaacagccacttctcaatcgaagacag 71686
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 65.9 bits (33), Expect = 2e-07 Identities = 74/87 (85%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 538 ggagcagccaccgtcggagagctccatcaggtcagcgacctgctcc---gccgcctcgtc 594 |||||||| ||| |||||||| ||||| ||||| || ||||||||| ||||||||||| Sbjct: 1318843 ggagcagcaaccatcggagaggtccatgaggtcggcaacctgctccgccgccgcctcgtc 1318902 Query: 595 gagaagccacttctcgatcgaacacag 621 || ||||||||||| |||||| |||| Sbjct: 1318903 gaacagccacttctcaatcgaagacag 1318929
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 65.9 bits (33), Expect = 2e-07 Identities = 74/87 (85%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 538 ggagcagccaccgtcggagagctccatcaggtcagcgacctgctc---cgccgcctcgtc 594 |||||||| ||| |||||||| ||||| ||||| || |||||||| |||||||||||| Sbjct: 1316564 ggagcagcaaccatcggagaggtccatgaggtcggcaacctgctccgccgccgcctcgtc 1316623 Query: 595 gagaagccacttctcgatcgaacacag 621 || ||||||||||| |||||| |||| Sbjct: 1316624 gaacagccacttctcaatcgaagacag 1316650
>emb|CR407704.10| Zebrafish DNA sequence from clone CH211-195G8 in linkage group 17, complete sequence Length = 146938 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 224 tctggcaacaacctggctttctt 246 ||||||||||||||||||||||| Sbjct: 36789 tctggcaacaacctggctttctt 36767
>ref|NM_176577.1| Drosophila melanogaster CG1646-RD, transcript variant D (CG1646), mRNA Length = 3289 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 634 ttggagctgctgctgctgtcccg 656 ||||||||||||||||||||||| Sbjct: 1618 ttggagctgctgctgctgtcccg 1596
>ref|NM_176576.1| Drosophila melanogaster CG1646-RC, transcript variant C (CG1646), mRNA Length = 3566 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 634 ttggagctgctgctgctgtcccg 656 ||||||||||||||||||||||| Sbjct: 1895 ttggagctgctgctgctgtcccg 1873
>ref|NM_170377.1| Drosophila melanogaster CG1646-RB, transcript variant B (CG1646), mRNA Length = 3409 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 634 ttggagctgctgctgctgtcccg 656 ||||||||||||||||||||||| Sbjct: 1738 ttggagctgctgctgctgtcccg 1716
>ref|NM_143377.2| Drosophila melanogaster CG1646-RA, transcript variant A (CG1646), mRNA Length = 3556 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 634 ttggagctgctgctgctgtcccg 656 ||||||||||||||||||||||| Sbjct: 1885 ttggagctgctgctgctgtcccg 1863
>gb|AY051737.1| Drosophila melanogaster LD26426 full length cDNA Length = 3554 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 634 ttggagctgctgctgctgtcccg 656 ||||||||||||||||||||||| Sbjct: 1871 ttggagctgctgctgctgtcccg 1849
>gb|AC006170.11|AC006170 Drosophila melanogaster, chromosome 3R, region 98E2-98F2, BAC clone BACR48K07, complete sequence Length = 168471 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 634 ttggagctgctgctgctgtcccg 656 ||||||||||||||||||||||| Sbjct: 31322 ttggagctgctgctgctgtcccg 31300
>emb|AJ507921.1|OAC507921 Oziroe acaulis chloroplast partial tRNA-Leu gene and trnL-trnF IGS, specimen voucher Weigend H665 Length = 959 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 408 tattatatatagatgtatatgca 430 ||||||||||||||||||||||| Sbjct: 290 tattatatatagatgtatatgca 312
>gb|AE003767.2| Drosophila melanogaster chromosome 3R, section 105 of 118 of the complete sequence Length = 231562 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 634 ttggagctgctgctgctgtcccg 656 ||||||||||||||||||||||| Sbjct: 14423 ttggagctgctgctgctgtcccg 14401
>emb|Z99146.1|LRZ99146 Ledebouria revoluta chloroplast trnL gene, intron, Voucher specimen Nordal 2082 Length = 525 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 408 tattatatatagatgtatatgca 430 ||||||||||||||||||||||| Sbjct: 298 tattatatatagatgtatatgca 320
>gb|AC073109.2| Homo sapiens BAC clone RP11-502P9 from 7, complete sequence Length = 158340 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 405 gtctattatatatagatgtata 426 |||||||||||||||||||||| Sbjct: 119066 gtctattatatatagatgtata 119045
>gb|AC074290.5| Homo sapiens BAC clone RP11-305O20 from 2, complete sequence Length = 172706 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 406 tctattatatatagatgtatat 427 |||||||||||||||||||||| Sbjct: 104729 tctattatatatagatgtatat 104750
>ref|XM_318403.2| Anopheles gambiae str. PEST ENSANGP00000015952 (ENSANGG00000013463), partial mRNA Length = 678 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 630 gatgttggagctgctgctgctg 651 |||||||||||||||||||||| Sbjct: 114 gatgttggagctgctgctgctg 93
>ref|XM_870835.1| PREDICTED: Bos taurus similar to Major centromere autoantigen B (Centromere protein B) (CENP-B) (LOC618502), mRNA Length = 1191 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 534 gggaggagcagccaccgtcgg 554 ||||||||||||||||||||| Sbjct: 410 gggaggagcagccaccgtcgg 430
>gb|AC147095.2| Pan troglodytes BAC clone RP43-51E22 from 7, complete sequence Length = 152510 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 406 tctattatatatagatgtata 426 ||||||||||||||||||||| Sbjct: 32043 tctattatatatagatgtata 32023
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 573 cgacctgctccgccgcctcgt 593 ||||||||||||||||||||| Sbjct: 3216245 cgacctgctccgccgcctcgt 3216265
>gb|AC145805.2| Xenopus tropicalis clone CH216-85O8, complete sequence Length = 166207 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 cctgttatttatttcctgtta 210 ||||||||||||||||||||| Sbjct: 107858 cctgttatttatttcctgtta 107838
>ref|XM_543684.2| PREDICTED: Canis familiaris similar to Myeloid/lymphoid or mixed-lineage leukemia protein 2 (ALL1-related protein) (LOC486558), mRNA Length = 18674 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 632 tgttggagctgctgctgctgt 652 ||||||||||||||||||||| Sbjct: 10994 tgttggagctgctgctgctgt 10974 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 632 tgttggagctgctgctgctg 651 |||||||||||||||||||| Sbjct: 10940 tgttggagctgctgctgctg 10921
>emb|CR954189.2| Medicago truncatula chromosome 5 clone mte1-73d17, COMPLETE SEQUENCE Length = 110556 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 caaaaataaatttcgccacaaaaaa 121 |||||||||||||||||| |||||| Sbjct: 26505 caaaaataaatttcgccaaaaaaaa 26481
>emb|AL445663.10| Human DNA sequence from clone RP11-442A13 on chromosome 9 Contains a tumor protein, translationally-controlled 1 (TPT1) pseudogene, complete sequence Length = 192226 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 atatagatgtatatgcatgta 434 ||||||||||||||||||||| Sbjct: 103124 atatagatgtatatgcatgta 103144
>emb|AL161618.17| Human DNA sequence from clone RP11-268F1 on chromosome 6 Contains the MEP1A gene for meprin A alpha (PABA peptide hydrolase) (PPHA), two novel genes (FLJ33075) and a CpG island, complete sequence Length = 90130 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 425 tatgcatgtaattaactacag 445 ||||||||||||||||||||| Sbjct: 51913 tatgcatgtaattaactacag 51933
>emb|AL136376.10| Human DNA sequence from clone RP4-655J12 on chromosome 1p12-13.3 Contains two novel genes, the ATP1A1 gene for ATPase (Na+/K+ transporting) alpha 1, the 3' end of a novel gene and one CpG island, complete sequence Length = 71008 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 atgtatttgggaaagtggcat 467 ||||||||||||||||||||| Sbjct: 32892 atgtatttgggaaagtggcat 32912
>emb|AL022319.2|HS172B20 Human DNA sequence from clone RP1-172B20 on chromosome 22q12.3-13.1 Contains the 3' part of the CACNA1I gene for voltage-dependent calcium channel, alpha 1I subunit, ESTs, STSs, GSSs and a putative CpG island, complete sequence Length = 213721 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 gcatcatgcttgcagatcata 177 ||||||||||||||||||||| Sbjct: 158864 gcatcatgcttgcagatcata 158844
>ref|NM_166223.1| Drosophila melanogaster connector enhancer of ksr CG6556-RA (cnk), mRNA Length = 5407 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 628 ctgatgttggagctgctgctgctgt 652 ||||||||| ||||||||||||||| Sbjct: 3743 ctgatgttgtagctgctgctgctgt 3719
>gb|AC103676.2| Homo sapiens chromosome 18, clone CTD-3223E7, complete sequence Length = 199566 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 318 tgttctctctggtaatttgat 338 ||||||||||||||||||||| Sbjct: 100408 tgttctctctggtaatttgat 100428
>gb|AY060248.1| Drosophila melanogaster GH07217 full length cDNA Length = 4583 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 410 ttatatatagatgtatatgcatgtaatta 438 |||||||||||| ||||| |||||||||| Sbjct: 3620 ttatatatagatatatattcatgtaatta 3648
>gb|AC046181.7| Homo sapiens chromosome 18, clone RP11-815K11, complete sequence Length = 172036 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 318 tgttctctctggtaatttgat 338 ||||||||||||||||||||| Sbjct: 124776 tgttctctctggtaatttgat 124796
>gb|AC009535.9| Drosophila melanogaster, chromosome 2R, region 54B-54B, BAC clone BACR28O12, complete sequence Length = 161244 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 628 ctgatgttggagctgctgctgctgt 652 ||||||||| ||||||||||||||| Sbjct: 130125 ctgatgttgtagctgctgctgctgt 130149
>gb|AC008004.5|AC008004 Drosophila melanogaster, chromosome 2R, region 54B-54C, BAC clone BACR21A09, complete sequence Length = 175506 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 628 ctgatgttggagctgctgctgctgt 652 ||||||||| ||||||||||||||| Sbjct: 7126 ctgatgttgtagctgctgctgctgt 7150
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 gtatatgcatgtaattaacta 442 ||||||||||||||||||||| Sbjct: 6950205 gtatatgcatgtaattaacta 6950185 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 tatatgcatgtaattaacta 442 |||||||||||||||||||| Sbjct: 35257210 tatatgcatgtaattaacta 35257191 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 aatttgatggtgtcatcgga 350 |||||||||||||||||||| Sbjct: 28484151 aatttgatggtgtcatcgga 28484170
>gb|AC007884.5|AC007884 Drosophila melanogaster, chromosome 2R, region 60F-60F, BAC clone BACR08I14, complete sequence Length = 190616 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 410 ttatatatagatgtatatgcatgtaatta 438 |||||||||||| ||||| |||||||||| Sbjct: 40569 ttatatatagatatatattcatgtaatta 40597
>gb|AC115537.2| Homo sapiens BAC clone RP11-1D15 from 4, complete sequence Length = 51626 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 409 attatatatagatgtatatgcatgt 433 ||||||||||||| ||||||||||| Sbjct: 22482 attatatatagatatatatgcatgt 22506
>gb|AC004904.1|AC004904 Homo sapiens PAC clone RP5-828F13 from 1, complete sequence Length = 126041 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 atgtatttgggaaagtggcat 467 ||||||||||||||||||||| Sbjct: 59177 atgtatttgggaaagtggcat 59197
>gb|AC078847.2|AC078847 Homo sapiens chromosome 7 clone RP11-3M15, complete sequence Length = 170919 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 tgttactgtcttgttccttctggca 230 ||||||| ||||||||||||||||| Sbjct: 44921 tgttactttcttgttccttctggca 44945
>gb|AC009276.9|AC009276 Homo sapiens chromosome 7 clone RP11-239G19, complete sequence Length = 163631 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 tgttactgtcttgttccttctggca 230 ||||||| ||||||||||||||||| Sbjct: 33629 tgttactttcttgttccttctggca 33605
>dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0470A03 Length = 133167 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 gtatatgcatgtaattaacta 442 ||||||||||||||||||||| Sbjct: 43827 gtatatgcatgtaattaacta 43807
>emb|BX248135.5| Zebrafish DNA sequence from clone CH211-106J4 in linkage group 17, complete sequence Length = 152463 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 411 tatatatagatgtatatgcat 431 ||||||||||||||||||||| Sbjct: 152413 tatatatagatgtatatgcat 152393
>emb|AJ507953.1|DSP507953 Drimiopsis sp. MP H642 chloroplast partial tRNA-Leu gene and trnL-trnF IGS, specimen voucher MP H642 Length = 915 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 406 tctattatatatagatgtatatgca 430 ||||||||||||| ||||||||||| Sbjct: 275 tctattatatatacatgtatatgca 299
>gb|BT021210.1| Drosophila melanogaster SD09985 full insert cDNA Length = 5425 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 628 ctgatgttggagctgctgctgctgt 652 ||||||||| ||||||||||||||| Sbjct: 3715 ctgatgttgtagctgctgctgctgt 3691
>gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47 of 73 of the complete sequence Length = 290783 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 628 ctgatgttggagctgctgctgctgt 652 ||||||||| ||||||||||||||| Sbjct: 150143 ctgatgttgtagctgctgctgctgt 150167
>gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72 of 73 of the complete sequence Length = 343833 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 410 ttatatatagatgtatatgcatgtaatta 438 |||||||||||| ||||| |||||||||| Sbjct: 192873 ttatatatagatatatattcatgtaatta 192901
>dbj|AP002961.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-2I22, complete sequence Length = 157903 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 catcatcccatcccatgcacc 269 ||||||||||||||||||||| Sbjct: 61475 catcatcccatcccatgcacc 61495
>gb|AF100152.1|AF100152 Drosophila melanogaster connector enhancer of KSR protein CNK mRNA, complete cds Length = 5420 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 628 ctgatgttggagctgctgctgctgt 652 ||||||||| ||||||||||||||| Sbjct: 3743 ctgatgttgtagctgctgctgctgt 3719
>emb|CT032339.1| Platynereis dumerilii EST IB0AAA40AG11EM1 Length = 924 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 cctggctttcttctcatcatc 255 ||||||||||||||||||||| Sbjct: 217 cctggctttcttctcatcatc 197
>emb|AJ232502.1|DMA232502 Drimiopsis maculata chloroplast trnL intron Length = 551 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 406 tctattatatatagatgtatatgca 430 ||||||||||||| ||||||||||| Sbjct: 322 tctattatatatacatgtatatgca 346
>ref|XM_550270.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2352 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 cgacctgctccgccgcctcg 592 |||||||||||||||||||| Sbjct: 1650 cgacctgctccgccgcctcg 1669
>ref|XM_508479.1| PREDICTED: Pan troglodytes similar to chromosome 11 open reading frame 9 (LOC451241), mRNA Length = 7302 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 635 tggagctgctgctgctgtcc 654 |||||||||||||||||||| Sbjct: 2918 tggagctgctgctgctgtcc 2937
>ref|XM_467253.1| Oryza sativa (japonica cultivar-group), mRNA Length = 746 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 aatttgatggtgtcatcgga 350 |||||||||||||||||||| Sbjct: 304 aatttgatggtgtcatcgga 285
>ref|XM_506901.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1148_D05.25 mRNA Length = 822 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 aatttgatggtgtcatcgga 350 |||||||||||||||||||| Sbjct: 356 aatttgatggtgtcatcgga 337
>gb|AC162898.10| Mus musculus chromosome 5, clone RP23-391P21, complete sequence Length = 202279 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 635 tggagctgctgctgctgtcccgtg 658 |||||||| ||||||||||||||| Sbjct: 165757 tggagctgatgctgctgtcccgtg 165780
>gb|DP000017.1| Sus scrofa target 1 genomic scaffold Length = 1471440 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 tatatatagatgtatatgcatgta 434 ||||||||||||||| |||||||| Sbjct: 1006525 tatatatagatgtatgtgcatgta 1006502
>gb|AY158017.1| Fucaceae mixed library SB-2002 microsatellite L94 sequence Length = 532 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 632 tgttggagctgctgctgctg 651 |||||||||||||||||||| Sbjct: 233 tgttggagctgctgctgctg 214
>gb|AC149676.2| Bos taurus BAC CH240-43C16 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 168416 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 632 tgttggagctgctgctgctg 651 |||||||||||||||||||| Sbjct: 161566 tgttggagctgctgctgctg 161547
>gb|AC149779.3| Bos taurus BAC CH240-5F6 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 181013 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 645 gctgctgtcccgtggcctca 664 |||||||||||||||||||| Sbjct: 4581 gctgctgtcccgtggcctca 4562
>gb|AC122117.10| Mus musculus chromosome 18, clone RP23-61O22, complete sequence Length = 207024 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 32778 tatatatatatgtatatgcatgta 32801
>gb|AC008309.8| Drosophila melanogaster clone BACR06L13, complete sequence Length = 163325 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 75044 tatatatatatgtatatgcatgta 75067
>gb|AC008308.9| Drosophila melanogaster clone BACR10M16, complete sequence Length = 196423 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 6799 tatatatatatgtatatgcatgta 6776
>ref|XM_368359.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00885.4) partial mRNA Length = 2445 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 628 ctgatgttggagctgctgctgctg 651 ||||||||| |||||||||||||| Sbjct: 1461 ctgatgttgaagctgctgctgctg 1438
>gb|AC161767.4| Pan troglodytes BAC clone CH251-365K8 from chromosome 7, complete sequence Length = 148248 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 133524 tatatatacatgtatatgcatgta 133501
>gb|AC161127.3| Pan troglodytes BAC clone CH251-452P2 from chromosome 7, complete sequence Length = 205655 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 16218 tatatatacatgtatatgcatgta 16195
>gb|AC137967.14| Mus musculus chromosome 10, clone RP24-323I24, complete sequence Length = 199669 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 406 tctattatatatagatgtatatgcatgt 433 ||||||||||||| |||||||| ||||| Sbjct: 9335 tctattatatatacatgtatatacatgt 9308
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 632 tgttggagctgctgctgctg 651 |||||||||||||||||||| Sbjct: 16684273 tgttggagctgctgctgctg 16684254
>gb|AC124721.4| Mus musculus chromosome 10 clone RP23-387G19, complete sequence Length = 216612 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 406 tctattatatatagatgtatatgcatgt 433 ||||||||||||| |||||||| ||||| Sbjct: 83679 tctattatatatacatgtatatacatgt 83706
>gb|AC011292.3| Homo sapiens BAC clone RP11-69N1 from 7, complete sequence Length = 107137 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 tattatatatagatgtatat 427 |||||||||||||||||||| Sbjct: 93641 tattatatatagatgtatat 93660
>gb|AC004895.2| Homo sapiens PAC clone RP4-810E6 from 7, complete sequence Length = 152927 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 acagaaattacttaacctgt 406 |||||||||||||||||||| Sbjct: 94836 acagaaattacttaacctgt 94855
>emb|AJ508252.1|FVE508252 Fragaria vesca microsatellite DNA, clone EMFv9 Length = 334 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 632 tgttggagctgctgctgctg 651 |||||||||||||||||||| Sbjct: 122 tgttggagctgctgctgctg 141
>gb|AC145906.2| Pan troglodytes BAC clone RP43-9J5 from 7, complete sequence Length = 220120 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 tattatatatagatgtatat 427 |||||||||||||||||||| Sbjct: 123655 tattatatatagatgtatat 123636
>ref|XM_448100.1| Candida glabrata CBS138, CAGL0J08998g partial mRNA Length = 3846 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 636 ggagctgctgctgctgtccc 655 |||||||||||||||||||| Sbjct: 2842 ggagctgctgctgctgtccc 2861
>gb|AC110234.11| Mus musculus chromosome 5, clone RP23-76J15, complete sequence Length = 235276 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 catcccatcccatgcaccat 271 |||||||||||||||||||| Sbjct: 184704 catcccatcccatgcaccat 184685
>gb|AC124438.4| Mus musculus BAC clone RP24-260K9 from chromosome 7, complete sequence Length = 183326 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 109433 tatatatatatgtatatgcatgta 109456
>gb|AC125807.9| Homo sapiens 12 BAC RP11-253E3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131995 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 agaaattacttaacctgtct 408 |||||||||||||||||||| Sbjct: 83342 agaaattacttaacctgtct 83361
>gb|AC124567.4| Mus musculus BAC clone RP23-145E22 from 6, complete sequence Length = 218924 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 101020 tatatatatatgtatatgcatgta 101043
>emb|CR407547.14| Zebrafish DNA sequence from clone DKEY-62A12 in linkage group 9, complete sequence Length = 204067 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 411 tatatatagatgtatatgcatgtaatta 438 |||||||| || |||||||||||||||| Sbjct: 13881 tatatatatatatatatgcatgtaatta 13908
>gb|BC004119.2| Homo sapiens CDKN1A interacting zinc finger protein 1, mRNA (cDNA clone MGC:1118 IMAGE:3507940), complete cds Length = 2702 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 632 tgttggagctgctgctgctg 651 |||||||||||||||||||| Sbjct: 38 tgttggagctgctgctgctg 19
>gb|AC113433.8| Oryza sativa chromosome 3 BAC OSJNBb0108E08 genomic sequence, complete sequence Length = 129167 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 632 tgttggagctgctgctgctg 651 |||||||||||||||||||| Sbjct: 35066 tgttggagctgctgctgctg 35047
>gb|AC006005.1| Homo sapiens PAC clone RP4-811O17 from 7, complete sequence Length = 26106 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 902 tatatatacatgtatatgcatgta 879
>gb|AC165347.4| Mus musculus BAC clone RP23-348B21 from chromosome 13, complete sequence Length = 205783 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 119830 tatatatatatgtatatgcatgta 119853
>emb|BX901897.6| Zebrafish DNA sequence from clone DKEY-115H20 in linkage group 1, complete sequence Length = 180979 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 ccttctggcaacaacctggctttc 244 ||||||||||||||||| |||||| Sbjct: 69930 ccttctggcaacaacctagctttc 69953
>emb|AL713866.4| Human DNA sequence from clone RP11-309H21 on chromosome 1 Contains a processed pseudogene similar to heterogeneous nuclear ribonucleoprotein A1 (HNRPA1), complete sequence Length = 142390 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 cctgttatttatttcctgtt 209 |||||||||||||||||||| Sbjct: 65599 cctgttatttatttcctgtt 65580
>emb|AL513366.11| Human DNA sequence from clone CTD-2522E6 on chromosome X Contains the RGN gene for regucalcin (senescence marker protein-30) (RC, SMP30), the gene for neuronal protein 17.3 (P17.3), the RBM10 gene for RNA binding motif protein 10 (MGC997, MGC1132, DXS8237E, KIAA0122), an inositol 1,3,4-triphosphate 5/6 kinase (ITPK1) pseudogene, the UBE1 gene for ubiquitin-activating enzyme E1 (A1S9T and BN75 temperature sensitivity complementing) (A1S9, A1ST, GXP1, A1S9T, UBE1X, MGC4781), the 5' UTR of the PCTK1 gene for PCTAIRE protein kinase 1 and five CpG islands, complete sequence Length = 145456 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 attatatatagatgtatatg 428 |||||||||||||||||||| Sbjct: 1216 attatatatagatgtatatg 1235
>emb|AL359770.12| Human DNA sequence from clone RP11-286B9 on chromosome 13, complete sequence Length = 104638 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 taattaactacagtatgtatttgg 456 |||||||||||| ||||||||||| Sbjct: 26249 taattaactacactatgtatttgg 26226
>emb|AL356503.18| Human DNA sequence from clone RP13-159A24 on chromosome Xq27.1-28, complete sequence Length = 147043 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 470 ttcgttggtttgccttttccagct 493 ||||||| |||||||||||||||| Sbjct: 60963 ttcgttgctttgccttttccagct 60986
>emb|AL353729.17| Human DNA sequence from clone RP11-290L7 on chromosome 9 Contains the 3' end of the CNTNAP3 gene for contactin associated protein-like 3, a TGF beta-inducible nuclear protein 1 (TINP1) pseudogene and a RNA binding motif protein 17 (RBM17) pseudogene, complete sequence Length = 195668 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ctgttatttatttcctgtta 210 |||||||||||||||||||| Sbjct: 179739 ctgttatttatttcctgtta 179758
>emb|AL080251.23|HSDJ93P18 Human DNA sequence from clone RP1-93P18 on chromosome 1p35.2-36.23 Contains the 5' end of the ALDH4A1 gene for aldehyde dehydrogenase 4 family, member A1, a novel gene and a CpG island, complete sequence Length = 103216 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ttctcatcatcccatcccat 264 |||||||||||||||||||| Sbjct: 57973 ttctcatcatcccatcccat 57954
>emb|Z97057.1|ATANR1 Arabidopsis thaliana mRNA for MADS-box transcription factor Length = 1098 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 630 gatgttggagctgctgctgc 649 |||||||||||||||||||| Sbjct: 406 gatgttggagctgctgctgc 387
>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence Length = 984602 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 tttcttctcatcatcccatc 260 |||||||||||||||||||| Sbjct: 453493 tttcttctcatcatcccatc 453512
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence Length = 1192501 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 636 ggagctgctgctgctgtccc 655 |||||||||||||||||||| Sbjct: 885496 ggagctgctgctgctgtccc 885515
>emb|AL663016.5|OSJN00216 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0076A22, complete sequence Length = 131489 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 taacctgtctattatatata 418 |||||||||||||||||||| Sbjct: 96245 taacctgtctattatatata 96226
>gb|AC157780.9| Mus musculus chromosome 3, clone RP23-331L5, complete sequence Length = 184569 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 635 tggagctgctgctgctgtcc 654 |||||||||||||||||||| Sbjct: 57194 tggagctgctgctgctgtcc 57213
>gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032N04, from chromosome 10, complete sequence Length = 159445 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 tatatgcatgtaattaacta 442 |||||||||||||||||||| Sbjct: 7075 tatatgcatgtaattaacta 7056
>gb|AC087455.7| Homo sapiens, clone RP11-143J24, complete sequence Length = 185644 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tcttgttccttctggcaaca 233 |||||||||||||||||||| Sbjct: 39561 tcttgttccttctggcaaca 39580
>emb|AJ720058.1| Gallus gallus mRNA for hypothetical protein, clone 10a9 Length = 4210 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 gtatgtatttgggaaagtgg 464 |||||||||||||||||||| Sbjct: 366 gtatgtatttgggaaagtgg 347
>ref|NM_001039317.1| Gallus gallus transient receptor potential cation channel, subfamily C, member 4 associated protein (TRPC4AP), mRNA Length = 4210 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 gtatgtatttgggaaagtgg 464 |||||||||||||||||||| Sbjct: 366 gtatgtatttgggaaagtgg 347
>ref|NM_142053.1| Drosophila melanogaster CG14366-RA (CG14366), mRNA Length = 2331 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 624 gcaactgatgttggagctgctgctgctg 651 ||||||| ||||| |||||||||||||| Sbjct: 805 gcaactgctgttgcagctgctgctgctg 778
>gb|AC069382.9| Homo sapiens chromosome 15, clone RP11-360J18, complete sequence Length = 193681 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tcttgttccttctggcaaca 233 |||||||||||||||||||| Sbjct: 115073 tcttgttccttctggcaaca 115092
>gb|AC097491.2| Homo sapiens BAC clone RP11-257A22 from 4, complete sequence Length = 145528 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 tattatatatagatgtatat 427 |||||||||||||||||||| Sbjct: 94725 tattatatatagatgtatat 94744
>gb|AC090848.4| Homo sapiens chromosome 11, clone RP11-780O24, complete sequence Length = 169559 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 tattatatatagatgtatat 427 |||||||||||||||||||| Sbjct: 158939 tattatatatagatgtatat 158920
>gb|AY060246.1| Drosophila melanogaster GH06646 full length cDNA Length = 4924 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 3051 tatatatatatgtatatgcatgta 3028
>emb|AJ586737.2| Drosophila virilis partial mod(mdg4) gene Length = 24391 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 629 tgatgttggagctgctgctgctgt 652 ||||| |||||||||||||||||| Sbjct: 11243 tgatgatggagctgctgctgctgt 11266
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 632 tgttggagctgctgctgctg 651 |||||||||||||||||||| Sbjct: 268970 tgttggagctgctgctgctg 268951
>gb|AC010587.6| Homo sapiens chromosome 5 clone CTC-394G3, complete sequence Length = 94536 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 aaattacttaacctgtctat 410 |||||||||||||||||||| Sbjct: 77464 aaattacttaacctgtctat 77483
>dbj|AK081443.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130018E23 product:hypothetical protein, full insert sequence Length = 2040 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 1216 tatatatatatgtatatgcatgta 1239
>gb|AC010372.6| Homo sapiens chromosome 5 clone CTD-2049O16, complete sequence Length = 125174 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 aaattacttaacctgtctat 410 |||||||||||||||||||| Sbjct: 89256 aaattacttaacctgtctat 89237
>dbj|AK028675.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732432D20 product:unclassifiable, full insert sequence Length = 3934 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 2665 tatatatatatgtatatgcatgta 2642
>gb|AC158620.6| Mus musculus 10 BAC RP23-288C18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 179342 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 acatgtaactaaacagaaat 394 |||||||||||||||||||| Sbjct: 68902 acatgtaactaaacagaaat 68921
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 taacctgtctattatatata 418 |||||||||||||||||||| Sbjct: 18133361 taacctgtctattatatata 18133342
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 tatatgcatgtaattaacta 442 |||||||||||||||||||| Sbjct: 11689014 tatatgcatgtaattaacta 11688995
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 gtacaattcaacaacgggta 47 |||||||||||||||||||| Sbjct: 27370294 gtacaattcaacaacgggta 27370313
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 632 tgttggagctgctgctgctg 651 |||||||||||||||||||| Sbjct: 16677906 tgttggagctgctgctgctg 16677887
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 cgacctgctccgccgcctcg 592 |||||||||||||||||||| Sbjct: 3598354 cgacctgctccgccgcctcg 3598335
>gb|AC023892.35|AC023892 Homo sapiens 12 BAC RP11-937H2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186000 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 161566 tatatatacatgtatatgcatgta 161543
>gb|AC007646.8|AC007646 Drosophila melanogaster, chromosome 3R, region 87F-87F, BAC clone BACR03J04, complete sequence Length = 179454 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 624 gcaactgatgttggagctgctgctgctg 651 ||||||| ||||| |||||||||||||| Sbjct: 164861 gcaactgctgttgcagctgctgctgctg 164834
>gb|AC007650.7|AC007650 Drosophila melanogaster, chromosome 3R, region 87F-87F, BAC clone BACR30G22, complete sequence Length = 167912 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 624 gcaactgatgttggagctgctgctgctg 651 ||||||| ||||| |||||||||||||| Sbjct: 71792 gcaactgctgttgcagctgctgctgctg 71765
>gb|AC068135.5| Homo sapiens BAC clone RP11-764E7 from 2, complete sequence Length = 164736 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 159322 tatatatacatgtatatgcatgta 159299
>gb|AC154515.2| Mus musculus BAC clone RP24-81I13 from chromosome 14, complete sequence Length = 172475 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 tttatttcctgttactgtcttgtt 220 ||||||||||||| |||||||||| Sbjct: 12311 tttatttcctgttgctgtcttgtt 12334
>gb|AC154183.2| Mus musculus BAC clone RP23-474E16 from chromosome 17, complete sequence Length = 181773 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 408 tattatatatagatgtatatgcatgtaa 435 ||||||||||| | |||||||||||||| Sbjct: 92443 tattatatatacacgtatatgcatgtaa 92470
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 cgacctgctccgccgcctcg 592 |||||||||||||||||||| Sbjct: 6834 cgacctgctccgccgcctcg 6815
>gb|AC097628.2| Takifugu rubripes clone 264E2, complete sequence Length = 88203 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 628 ctgatgttggagctgctgctgctg 651 |||||| ||||||||||||||||| Sbjct: 73892 ctgatggtggagctgctgctgctg 73915
>gb|AC079907.25| Homo sapiens 12q BAC RP11-554E23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184840 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 410 ttatatatagatgtatatgcatgt 433 ||||||||| |||||||||||||| Sbjct: 25345 ttatatatacatgtatatgcatgt 25322
>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1148_D05 Length = 155146 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 aatttgatggtgtcatcgga 350 |||||||||||||||||||| Sbjct: 108272 aatttgatggtgtcatcgga 108291
>dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017H11 Length = 158374 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 aatttgatggtgtcatcgga 350 |||||||||||||||||||| Sbjct: 52992 aatttgatggtgtcatcgga 53011
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 tatatgcatgtaattaacta 442 |||||||||||||||||||| Sbjct: 7544 tatatgcatgtaattaacta 7525
>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1276_B06 Length = 175174 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 cgacctgctccgccgcctcg 592 |||||||||||||||||||| Sbjct: 166422 cgacctgctccgccgcctcg 166403
>dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0686E06 Length = 150474 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 gtacaattcaacaacgggta 47 |||||||||||||||||||| Sbjct: 113121 gtacaattcaacaacgggta 113140
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 tatatgcatgtaattaacta 442 |||||||||||||||||||| Sbjct: 69260 tatatgcatgtaattaacta 69241
>dbj|BS000010.1| Pan troglodytes chromosome 22 clone:PTB-095F11, map 22, complete sequences Length = 177250 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 ggttcgttggtttgcctttt 487 |||||||||||||||||||| Sbjct: 88942 ggttcgttggtttgcctttt 88923
>gb|AC153603.3| Mus musculus 6 BAC RP23-315I7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228174 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 32116 tatatatatatgtatatgcatgta 32139
>dbj|AK119260.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-H07, full insert sequence Length = 746 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 aatttgatggtgtcatcgga 350 |||||||||||||||||||| Sbjct: 305 aatttgatggtgtcatcgga 286
>gb|AC153102.3| Sus scrofa clone RP44-33N10, complete sequence Length = 113400 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 tatatatagatgtatatgcatgta 434 ||||||||||||||| |||||||| Sbjct: 31489 tatatatagatgtatgtgcatgta 31466
>dbj|AK071581.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100A17, full insert sequence Length = 822 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 aatttgatggtgtcatcgga 350 |||||||||||||||||||| Sbjct: 356 aatttgatggtgtcatcgga 337
>ref|NM_208702.1| Eremothecium gossypii ACL055Wp (ACL055W), mRNA Length = 1416 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 632 tgttggagctgctgctgctg 651 |||||||||||||||||||| Sbjct: 1046 tgttggagctgctgctgctg 1027
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 149439 tatatatatatgtatatgcatgta 149462
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 1601099 tatatatatatgtatatgcatgta 1601122
>emb|CR628394.17| Zebrafish DNA sequence from clone DKEY-204A24 in linkage group 19, complete sequence Length = 242800 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 215782 tatatatatatgtatatgcatgta 215759
>dbj|AK061224.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-H01, full insert sequence Length = 1218 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 cgacctgctccgccgcctcg 592 |||||||||||||||||||| Sbjct: 315 cgacctgctccgccgcctcg 334
>gb|AE003734.3| Drosophila melanogaster chromosome 3R, section 72 of 118 of the complete sequence Length = 250533 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 115503 tatatatatatgtatatgcatgta 115526
>gb|AE003701.2| Drosophila melanogaster chromosome 3R, section 39 of 118 of the complete sequence Length = 208368 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 624 gcaactgatgttggagctgctgctgctg 651 ||||||| ||||| |||||||||||||| Sbjct: 145935 gcaactgctgttgcagctgctgctgctg 145908
>dbj|AP001652.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-780O24, complete sequences Length = 169560 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 tattatatatagatgtatat 427 |||||||||||||||||||| Sbjct: 10621 tattatatatagatgtatat 10640
>dbj|AP000797.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-36B5, complete sequence Length = 148490 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 attatatatagatgtatatg 428 |||||||||||||||||||| Sbjct: 126967 attatatatagatgtatatg 126948
>dbj|AB017651.2| Homo sapiens genomic DNA, chromosome 11q23.2, clone:KB615C6, complete sequence Length = 131668 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 attatatatagatgtatatg 428 |||||||||||||||||||| Sbjct: 24923 attatatatagatgtatatg 24904
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 tatatgcatgtaattaacta 442 |||||||||||||||||||| Sbjct: 11696354 tatatgcatgtaattaacta 11696335
>emb|CT010476.10| Mouse DNA sequence from clone RP23-339L19 on chromosome 12, complete sequence Length = 235489 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 669 catagatcatgccccccatt 688 |||||||||||||||||||| Sbjct: 165248 catagatcatgccccccatt 165229
>emb|CR293526.28| Mouse DNA sequence from clone RP23-9K14 on chromosome X, complete sequence Length = 211297 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 gttggtttgccttttccagc 492 |||||||||||||||||||| Sbjct: 36886 gttggtttgccttttccagc 36905
>emb|AJ232453.1|OBI232453 Oziroe biflora chloroplast trnL intron Length = 565 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 tatatatagatgtatatgca 430 |||||||||||||||||||| Sbjct: 336 tatatatagatgtatatgca 355
>emb|AJ232452.1|OSP232452 Oziroe sp. h362 chloroplast trnL intron Length = 561 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 tatatatagatgtatatgca 430 |||||||||||||||||||| Sbjct: 330 tatatatagatgtatatgca 349
>emb|AL121808.4|CNS01DSJ Human chromosome 14 DNA sequence BAC C-2313O13 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 124041 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 tatatatagatgtatatgcatgta 434 |||||||| ||||||||||||||| Sbjct: 27747 tatatatatatgtatatgcatgta 27770
>emb|AL929125.1| Mouse DNA sequence from clone RP23-262O4 on chromosome 2, complete sequence Length = 183595 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 414 atatagatgtatatgcatgtaatt 437 ||||| |||||||||||||||||| Sbjct: 61795 atatatatgtatatgcatgtaatt 61818
>dbj|AP003159.1| Homo sapiens genomic DNA, chromosome 1p36 clone:1024F16, complete sequence Length = 113733 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ttctcatcatcccatcccat 264 |||||||||||||||||||| Sbjct: 59095 ttctcatcatcccatcccat 59076 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,488,586 Number of Sequences: 3902068 Number of extensions: 7488586 Number of successful extensions: 205202 Number of sequences better than 10.0: 158 Number of HSP's better than 10.0 without gapping: 160 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 203607 Number of HSP's gapped (non-prelim): 1585 length of query: 727 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 704 effective length of database: 17,143,297,704 effective search space: 12068881583616 effective search space used: 12068881583616 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
