Clone Information

BLAST Search Result

Clone Name	rbags6k04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL5A_ORYSA (P49625) 60S ribosomal protein L5-1	253	3e-67
2	RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2	252	8e-67
3	RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5	224	2e-58
4	RL5_ARATH (P49227) 60S ribosomal protein L5	214	2e-55
5	RL5_SOLME (P93779) 60S ribosomal protein L5 (Fragment)	162	8e-40
6	RL5_BOMMO (O76190) 60S ribosomal protein L5	140	3e-33
7	RL5_STYCL (Q26481) 60S ribosomal protein L5	139	9e-33
8	RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)	137	2e-32
9	RL5_CAEEL (P49405) 60S ribosomal protein L5	136	5e-32
10	RL5_HELAN (O65353) 60S ribosomal protein L5	135	1e-31
11	RL5B_SCHPO (O74306) 60S ribosomal protein L5-B	132	9e-31
12	RL5A_SCHPO (P52822) 60S ribosomal protein L5-A	130	3e-30
13	RL5_DUNSA (O22608) 60S ribosomal protein L5	129	6e-30
14	RL5B_XENLA (P15126) 60S ribosomal protein L5-B	127	2e-29
15	RL5A_XENLA (P15125) 60S ribosomal protein L5-A	127	4e-29
16	RL5_MACFA (Q4R5M0) 60S ribosomal protein L5	126	5e-29
17	RL5_HUMAN (P46777) 60S ribosomal protein L5	126	5e-29
18	RL5_RAT (P09895) 60S ribosomal protein L5	126	6e-29
19	RL5_MOUSE (P47962) 60S ribosomal protein L5	126	6e-29
20	RL5_CHICK (P22451) 60S ribosomal protein L5	125	8e-29
21	RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosoma...	121	2e-27
22	RL5_ANOGA (O44248) 60S ribosomal protein L5	120	4e-27
23	RL18_METKA (Q8TZA5) 50S ribosomal protein L18P	57	5e-08
24	RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P	54	5e-07
25	RL18_METJA (P54044) 50S ribosomal protein L18P	54	5e-07
26	RL18_AERPE (Q9YF94) 50S ribosomal protein L18P	52	1e-06
27	RL18_METMP (Q6LXD4) 50S ribosomal protein L18P	50	4e-06
28	RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P	50	6e-06
29	RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P	50	7e-06
30	RL18_PYRHO (O59438) 50S ribosomal protein L18P	48	2e-05
31	RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)	48	2e-05
32	RL18_SULTO (Q975J9) 50S ribosomal protein L18P	48	3e-05
33	RL18_NANEQ (Q74MJ4) 50S ribosomal protein L18P	46	1e-04
34	RL18_METVA (P14033) 50S ribosomal protein L18P	44	4e-04
35	RL18_SULSO (Q9UX88) 50S ribosomal protein L18P	41	0.003
36	RL18_METTH (O26130) 50S ribosomal protein L18P	41	0.003
37	RL18_ARCFU (O28373) 50S ribosomal protein L18P	38	0.022
38	RL18_SULAC (O05640) 50S ribosomal protein L18P	38	0.029
39	RL18_HALSA (P50562) 50S ribosomal protein L18P (HCuL18) (HSal18)...	35	0.25
40	RL18_HALMA (P14123) 50S ribosomal protein L18P (Hmal18) (Hl12)	34	0.42
41	ZN674_HUMAN (Q2M3X9) Zinc finger protein 674	33	0.55
42	SRYD_DROME (P07664) Serendipity locus protein delta	31	2.7
43	MYF6_FUGRU (Q6SYV5) Myogenic factor 6 (Myf-6) (Muscle-specific r...	31	2.7
44	UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstrea...	30	4.6
45	SCNNB_RAT (P37090) Amiloride-sensitive sodium channel beta-subun...	30	6.1
46	CTR3_MOUSE (P70423) Cationic amino acid transporter 3 (CAT-3) (S...	30	6.1
47	NCKP1_ARATH (Q5S2C4) Protein NAP1 (Nck-associated protein 1) (At...	30	6.1
48	RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)	30	7.9
49	ODO1_RICCN (Q92J42) 2-oxoglutarate dehydrogenase E1 component (E...	30	7.9
50	VTA1_YEAST (Q06263) Vacuolar protein sorting-associated protein ...	30	7.9

>RL5A_ORYSA (P49625) 60S ribosomal protein L5-1|
          Length = 304

 Score =  253 bits (646), Expect = 3e-67
 Identities = 125/154 (81%), Positives = 135/154 (87%)
 Frame = -2

Query: 637 PFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIY 458
           PFRALLDVGLIRTTTGNRVF           DIPHSDKRFAGFKKDEK LD++IHRKYIY
Sbjct: 141 PFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIY 200

Query: 457 GGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA 278
           GGHVADYMRS+A+EEPEK+Q HFSEY+KKGI AD MEA+YKKVHAAIRADP+MAKSTK  
Sbjct: 201 GGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKE 260

Query: 277 PKTHKRYNPKKLTYEERKASLVERLNALNNSAGA 176
           P THKRYN KKLTYE+RKASLVERLNALN+SAGA
Sbjct: 261 PATHKRYNLKKLTYEQRKASLVERLNALNSSAGA 294

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>RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2|
          Length = 304

 Score =  252 bits (643), Expect = 8e-67
 Identities = 124/154 (80%), Positives = 135/154 (87%)
 Frame = -2

Query: 637 PFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIY 458
           PFRALLDVGLIRTTTGNRVF           DIPHSDKRFAGFKKDEK LD++IHRKYIY
Sbjct: 141 PFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIY 200

Query: 457 GGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA 278
           GGHVADYMRS+A+EEPEK+Q HFSEY+KKGI AD ME++YKKVHAAIRADP+MAKSTK  
Sbjct: 201 GGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMESLYKKVHAAIRADPTMAKSTKKE 260

Query: 277 PKTHKRYNPKKLTYEERKASLVERLNALNNSAGA 176
           P THKRYN KKLTYE+RKASLVERLNALN+SAGA
Sbjct: 261 PATHKRYNLKKLTYEQRKASLVERLNALNSSAGA 294

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>RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5|
          Length = 302

 Score =  224 bits (570), Expect = 2e-58
 Identities = 109/152 (71%), Positives = 125/152 (82%)
 Frame = -2

Query: 637 PFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIY 458
           PFRALLDVGLIRTTTGNRVF           DIPHSDKRFAG+ K+ + LD E+HRKYI+
Sbjct: 140 PFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGYAKNGQQLDVEVHRKYIF 199

Query: 457 GGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA 278
           GGHVA YMR+L ++EPEKYQ+HFSEYIKKGI AD++E +YKKVHAAIRA+P   KS KP 
Sbjct: 200 GGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIEADELEGLYKKVHAAIRANPIAKKSDKPQ 259

Query: 277 PKTHKRYNPKKLTYEERKASLVERLNALNNSA 182
           PK HKRYN KKLTY+ERKA LVERLNALN++A
Sbjct: 260 PKAHKRYNLKKLTYDERKARLVERLNALNSAA 291

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>RL5_ARATH (P49227) 60S ribosomal protein L5|
          Length = 301

 Score =  214 bits (545), Expect = 2e-55
 Identities = 104/153 (67%), Positives = 120/153 (78%)
 Frame = -2

Query: 637 PFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIY 458
           PFRALLDVGLIRTTTGNRVF           DIPHSDKRFAGF K+ K LDAEIHR YIY
Sbjct: 140 PFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIY 199

Query: 457 GGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA 278
           GGHV++YM+ L ++EPEK QTHFS YIKKG+ A+ +E +YKKVHAAIRA+P+  K+ K A
Sbjct: 200 GGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKSA 259

Query: 277 PKTHKRYNPKKLTYEERKASLVERLNALNNSAG 179
           PK HKRYN KKLTYEERK  L+ER+ ALN + G
Sbjct: 260 PKEHKRYNLKKLTYEERKNKLIERVKALNGAGG 292

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>RL5_SOLME (P93779) 60S ribosomal protein L5 (Fragment)|
          Length = 121

 Score =  162 bits (410), Expect = 8e-40
 Identities = 77/109 (70%), Positives = 88/109 (80%)
 Frame = -2

Query: 505 KDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVH 326
           KD K LDAE+HRKYIYGGHVA YM  L ++EPEKYQ+HFS YIK  ++ D++E +YKKVH
Sbjct: 3   KDSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVH 62

Query: 325 AAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNNSAG 179
           AAIR DPS  KS K  PKTHKRYN KKLTYEERKA L+ERLNALN + G
Sbjct: 63  AAIRPDPSPKKSQKQPPKTHKRYNLKKLTYEERKAKLIERLNALNAAGG 111

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>RL5_BOMMO (O76190) 60S ribosomal protein L5|
          Length = 299

 Score =  140 bits (353), Expect = 3e-33
 Identities = 74/154 (48%), Positives = 97/154 (62%), Gaps = 8/154 (5%)
 Frame = -2

Query: 634 FRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYG 455
           FR  LDVGL RTTTG RVF           ++PHS KRF G+  + K  +AE+HR +I+G
Sbjct: 142 FRCYLDVGLARTTTGRRVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFG 201

Query: 454 GHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPS-MAKSTKPA 278
            HVA+YMRSL  ++ + ++  FS+YIK G++AD +EA+YKK H AIRADPS   K  K  
Sbjct: 202 LHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKD 261

Query: 277 PKTHKRYNPKKLTYEER-------KASLVERLNA 197
               KR+N +KLT  ER       KAS ++RL A
Sbjct: 262 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQA 295

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>RL5_STYCL (Q26481) 60S ribosomal protein L5|
          Length = 294

 Score =  139 bits (349), Expect = 9e-33
 Identities = 68/137 (49%), Positives = 92/137 (67%)
 Frame = -2

Query: 634 FRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYG 455
           FRA LDVGL RTTTG +VF           DIPHS KRF G+  +     AE+HR +I+G
Sbjct: 141 FRAFLDVGLARTTTGAKVFGAMKGAADGGLDIPHSTKRFPGYDDESGDFSAEVHRSHIFG 200

Query: 454 GHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAP 275
           GHV++YM+ L +E+ E ++  FS+YIK G++AD +E +Y K HAAIR DP+  K T  A 
Sbjct: 201 GHVSNYMKELEEEDEEAFKRQFSQYIKHGVTADTVEEMYTKAHAAIREDPTPKKKTDFAG 260

Query: 274 KTHKRYNPKKLTYEERK 224
           KT KR+N KK+T+ +R+
Sbjct: 261 KT-KRWNRKKMTFSQRR 276

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>RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)|
          Length = 301

 Score =  137 bits (346), Expect = 2e-32
 Identities = 71/158 (44%), Positives = 98/158 (62%), Gaps = 8/158 (5%)
 Frame = -2

Query: 637 PFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIY 458
           PF+A LDVGL RT+TG RVF            IPHS+ RF G+  + + LDAE  +KYI+
Sbjct: 144 PFKAFLDVGLARTSTGARVFGAMKGASDGGIFIPHSENRFPGYDMESEELDAETLKKYIF 203

Query: 457 GGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA 278
           GGHVA+YM +LAD++ E+Y++ F+ YI+  + AD +E +Y + HAAIR DP   K+   A
Sbjct: 204 GGHVAEYMETLADDDEERYKSQFNRYIEDDLEADGLEDLYAEAHAAIREDP-FKKAESEA 262

Query: 277 PKTHK--------RYNPKKLTYEERKASLVERLNALNN 188
           PK  K        +Y   KLT E+R A + ER+ AL +
Sbjct: 263 PKKTKEEWKAESLKYKKSKLTREQRAAGVQERIAALRS 300

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>RL5_CAEEL (P49405) 60S ribosomal protein L5|
          Length = 293

 Score =  136 bits (343), Expect = 5e-32
 Identities = 65/144 (45%), Positives = 97/144 (67%)
 Frame = -2

Query: 637 PFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIY 458
           PF+A+LD+GL RTTTG+++F           ++PHS+ RF GF ++ K  +AE HR  I 
Sbjct: 140 PFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRIL 199

Query: 457 GGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA 278
           G HVADYM  L +E+ ++Y+  FS+++  G++AD++ A Y+KVH+AIRAD S A   K A
Sbjct: 200 GKHVADYMTYLKEEDEDRYKRQFSKFLAAGLNADNLVATYQKVHSAIRADASPA--AKKA 257

Query: 277 PKTHKRYNPKKLTYEERKASLVER 206
            K  KR+  K+LTY+ERK  + ++
Sbjct: 258 AKPSKRHTAKRLTYDERKQRVADK 281

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>RL5_HELAN (O65353) 60S ribosomal protein L5|
          Length = 297

 Score =  135 bits (340), Expect = 1e-31
 Identities = 70/141 (49%), Positives = 94/141 (66%), Gaps = 1/141 (0%)
 Frame = -2

Query: 634 FRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYG 455
           FR  LDVGL+RTTTG RVF           +I HS KRF GF  + K  +A++HR++I+G
Sbjct: 142 FRCYLDVGLMRTTTGARVFGAMKGAVDGGLNILHSTKRFPGFDSESKEFNADVHRQHIFG 201

Query: 454 GHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA- 278
            HVA+YMR LA+E+ E Y+  FS+YIK G++AD +E +YKK H AIRA+P+     K A 
Sbjct: 202 QHVAEYMRQLAEEDDEAYKRQFSQYIKLGLNADAIEGLYKKAHEAIRANPARKTVAKKAH 261

Query: 277 PKTHKRYNPKKLTYEERKASL 215
           PK  KR+  KKLT E+R+  +
Sbjct: 262 PK--KRWTEKKLTREQRQGKV 280

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>RL5B_SCHPO (O74306) 60S ribosomal protein L5-B|
          Length = 294

 Score =  132 bits (332), Expect = 9e-31
 Identities = 75/158 (47%), Positives = 91/158 (57%), Gaps = 3/158 (1%)
 Frame = -2

Query: 637 PFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIY 458
           PF+  LDVGL RT+TG+RVF            IPHS  RF GF  + + LD E  RKYIY
Sbjct: 141 PFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIY 200

Query: 457 GGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA 278
           GGHVA+YM  L D++ E+YQ  FS  I  GI +D +E +Y + +A IR DPS  KS K A
Sbjct: 201 GGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDA 260

Query: 277 ---PKTHKRYNPKKLTYEERKASLVERLNALNNSAGAA 173
                   +Y  +KLT EERK    ER NA    AG A
Sbjct: 261 AAFKAESLKYTQRKLTAEERK----ERFNAKVIEAGRA 294

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>RL5A_SCHPO (P52822) 60S ribosomal protein L5-A|
          Length = 294

 Score =  130 bits (327), Expect = 3e-30
 Identities = 74/158 (46%), Positives = 91/158 (57%), Gaps = 3/158 (1%)
 Frame = -2

Query: 637 PFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIY 458
           PF+  LDVGL RT+TG+RVF            IPHS  RF GF  + + LD E  RKYIY
Sbjct: 141 PFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIY 200

Query: 457 GGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA 278
           GGHVA+YM  L D++ E+YQ  FS  I  GI +D +E +Y + +A IR DPS  KS K A
Sbjct: 201 GGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDA 260

Query: 277 ---PKTHKRYNPKKLTYEERKASLVERLNALNNSAGAA 173
                   ++  +KLT EERK    ER NA    AG A
Sbjct: 261 AAFKAESLKHTQRKLTAEERK----ERFNAKVIEAGRA 294

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>RL5_DUNSA (O22608) 60S ribosomal protein L5|
          Length = 271

 Score =  129 bits (325), Expect = 6e-30
 Identities = 62/130 (47%), Positives = 85/130 (65%)
 Frame = -2

Query: 637 PFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIY 458
           PF  LLD GL RT+TG++VF           DIPH++KRF G+   +K LD E+ +KYIY
Sbjct: 141 PFYCLLDTGLKRTSTGSKVFAAMKGALDGGLDIPHNEKRFVGYA--DKKLDTEVLQKYIY 198

Query: 457 GGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA 278
           GGHVA+Y  ++ +EEPEKYQ HFS Y++  I  D +E +YK+VHA IR +P   K  +  
Sbjct: 199 GGHVAEYQETMQEEEPEKYQAHFSSYVENEIEPDGIEDMYKEVHAKIRENPCPPKKERTK 258

Query: 277 PKTHKRYNPK 248
           P   KR++P+
Sbjct: 259 PADAKRWSPQ 268

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>RL5B_XENLA (P15126) 60S ribosomal protein L5-B|
          Length = 295

 Score =  127 bits (320), Expect = 2e-29
 Identities = 61/143 (42%), Positives = 88/143 (61%)
 Frame = -2

Query: 634 FRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYG 455
           F   LD GL RTTTGN+VF            IPHS KRF G+  + K  + E+HRK+I+ 
Sbjct: 141 FTCYLDAGLTRTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNPEVHRKHIFA 200

Query: 454 GHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAP 275
            ++A+YMR L +E+ + Y+  FS+YIK G++AD +E +YKK HA IR +P   K  K   
Sbjct: 201 QNIAEYMRLLMEEDEDAYKKQFSQYIKNGVAADQLEDIYKKAHAGIRENPVHEKKPKKEV 260

Query: 274 KTHKRYNPKKLTYEERKASLVER 206
           K  KR+N  KL+ E++K  + ++
Sbjct: 261 K-KKRWNRAKLSLEQKKDRVAQK 282

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>RL5A_XENLA (P15125) 60S ribosomal protein L5-A|
          Length = 295

 Score =  127 bits (318), Expect = 4e-29
 Identities = 62/143 (43%), Positives = 88/143 (61%)
 Frame = -2

Query: 634 FRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYG 455
           F   LD GL RTTTGN+VF            IPHS KRF G+  + K  + E+HRK+I+ 
Sbjct: 141 FTCYLDAGLTRTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNPEVHRKHIFA 200

Query: 454 GHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAP 275
            +VA+YMR L +E+ + Y+  FS+YIK G++AD +E +YKK HA IR +P   K  K   
Sbjct: 201 QNVAEYMRLLMEEDEDAYKKQFSQYIKNGVTADQVEDLYKKAHAGIRENPVHEKKPKKEV 260

Query: 274 KTHKRYNPKKLTYEERKASLVER 206
           K  KR+N  KL+ E++K  + ++
Sbjct: 261 K-KKRWNRAKLSLEQKKDRVAQK 282

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>RL5_MACFA (Q4R5M0) 60S ribosomal protein L5|
          Length = 296

 Score =  126 bits (317), Expect = 5e-29
 Identities = 63/143 (44%), Positives = 87/143 (60%)
 Frame = -2

Query: 634 FRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYG 455
           F   LD GL RTTTGN+VF            IPHS KRF G+  + K  +AE+HRK+I G
Sbjct: 141 FTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMG 200

Query: 454 GHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAP 275
            +VADYMR L +E+ + Y+  FS+YIK  ++ D ME +YKK HAAIR +P   K  K   
Sbjct: 201 QNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKEV 260

Query: 274 KTHKRYNPKKLTYEERKASLVER 206
           K  KR+N  K++  ++K  + ++
Sbjct: 261 K-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5_HUMAN (P46777) 60S ribosomal protein L5|
          Length = 296

 Score =  126 bits (317), Expect = 5e-29
 Identities = 63/143 (44%), Positives = 87/143 (60%)
 Frame = -2

Query: 634 FRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYG 455
           F   LD GL RTTTGN+VF            IPHS KRF G+  + K  +AE+HRK+I G
Sbjct: 141 FTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMG 200

Query: 454 GHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAP 275
            +VADYMR L +E+ + Y+  FS+YIK  ++ D ME +YKK HAAIR +P   K  K   
Sbjct: 201 QNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKEV 260

Query: 274 KTHKRYNPKKLTYEERKASLVER 206
           K  KR+N  K++  ++K  + ++
Sbjct: 261 K-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5_RAT (P09895) 60S ribosomal protein L5|
          Length = 296

 Score =  126 bits (316), Expect = 6e-29
 Identities = 63/143 (44%), Positives = 87/143 (60%)
 Frame = -2

Query: 634 FRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYG 455
           F   LD GL RTTTGN+VF            IPHS KRF G+  + K  +AE+HRK+I G
Sbjct: 141 FTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMG 200

Query: 454 GHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAP 275
            +VADYMR L +E+ + Y+  FS+YIK  ++ D ME +YKK HAAIR +P   K  K   
Sbjct: 201 QNVADYMRYLMEEDEDAYKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENPVYEKKPKREV 260

Query: 274 KTHKRYNPKKLTYEERKASLVER 206
           K  KR+N  K++  ++K  + ++
Sbjct: 261 K-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5_MOUSE (P47962) 60S ribosomal protein L5|
          Length = 296

 Score =  126 bits (316), Expect = 6e-29
 Identities = 63/143 (44%), Positives = 87/143 (60%)
 Frame = -2

Query: 634 FRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYG 455
           F   LD GL RTTTGN+VF            IPHS KRF G+  + K  +AE+HRK+I G
Sbjct: 141 FTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMG 200

Query: 454 GHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAP 275
            +VADYMR L +E+ + Y+  FS+YIK  ++ D ME +YKK HAAIR +P   K  K   
Sbjct: 201 QNVADYMRYLMEEDEDAYKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENPVYEKKPKREV 260

Query: 274 KTHKRYNPKKLTYEERKASLVER 206
           K  KR+N  K++  ++K  + ++
Sbjct: 261 K-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5_CHICK (P22451) 60S ribosomal protein L5|
          Length = 296

 Score =  125 bits (315), Expect = 8e-29
 Identities = 64/143 (44%), Positives = 86/143 (60%)
 Frame = -2

Query: 634 FRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYG 455
           F   LD GL RTTTGN+VF            IPHS KRF G+  + K  +AE+HRK+I G
Sbjct: 141 FTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMG 200

Query: 454 GHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAP 275
            +VADYMR L +E+ + Y+  FS+YIK  I+ D ME +YKK HAAIR +P   K  K   
Sbjct: 201 QNVADYMRYLMEEDEDAYKKQFSQYIKNNITPDGMEEMYKKAHAAIRDNPVHEKKPKREV 260

Query: 274 KTHKRYNPKKLTYEERKASLVER 206
           K  KR N  K++  ++K  + ++
Sbjct: 261 K-KKRVNSTKMSLAQKKDRVAQK 282

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>RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosomal 5S|
           RNA-binding protein)
          Length = 296

 Score =  121 bits (304), Expect = 2e-27
 Identities = 61/153 (39%), Positives = 86/153 (56%), Gaps = 5/153 (3%)
 Frame = -2

Query: 637 PFRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIY 458
           PF+  LD+GL RTTTG RVF            +PHS+ RF G+  + + +D E+ R YI+
Sbjct: 140 PFKVFLDIGLQRTTTGARVFGALKGASDGGLYVPHSENRFPGWDFETEEIDPELLRSYIF 199

Query: 457 GGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA 278
           GGHV+ YM  LAD++ E++   F  Y+   I AD +E +Y   H AIRADP+   + K  
Sbjct: 200 GGHVSQYMEELADDDEERFSELFKGYLADDIDADSLEDIYTSAHEAIRADPAFKPTEKKF 259

Query: 277 PKTH-----KRYNPKKLTYEERKASLVERLNAL 194
            K       K+Y   KL+ EER A +  ++ AL
Sbjct: 260 TKEQYAAESKKYRQTKLSKEERAARVAAKIAAL 292

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>RL5_ANOGA (O44248) 60S ribosomal protein L5|
          Length = 327

 Score =  120 bits (300), Expect = 4e-27
 Identities = 60/127 (47%), Positives = 83/127 (65%), Gaps = 1/127 (0%)
 Frame = -2

Query: 634 FRALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYG 455
           FR  LDVGL RTTTG+RVF           +IPHS KRF G+  + KS +AE+HR +I+G
Sbjct: 142 FRCYLDVGLARTTTGSRVFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEMHRDHIFG 201

Query: 454 GHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIR-ADPSMAKSTKPA 278
            HVA+YMR+L +E+ E ++  FS+YI  GI ADD+E +YK  HA+IR   PS     + +
Sbjct: 202 LHVANYMRTLEEEDEEAFKRQFSKYISLGIKADDIENIYKNAHASIRKIPPSRRNPRRRS 261

Query: 277 PKTHKRY 257
           P++  R+
Sbjct: 262 PRSGGRW 268

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>RL18_METKA (Q8TZA5) 50S ribosomal protein L18P|
          Length = 202

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 32/108 (29%), Positives = 57/108 (52%)
 Frame = -2

Query: 631 RALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGG 452
           RA++D+GL R   G+RVF           DIPH           E+ L  E     I G 
Sbjct: 104 RAVIDIGLHRPVRGSRVFAMLKGALDAGMDIPHG----------EEVLPPEDR---IRGE 150

Query: 451 HVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRAD 308
           H+A+  R + +E+PE+Y+  FS+Y+++G+  +++   +++V + I  +
Sbjct: 151 HIANLARQIKEEDPEEYERRFSKYLERGLKPEELPEHFEEVKSKIEEE 198

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>RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P|
          Length = 205

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 32/104 (30%), Positives = 48/104 (46%)
 Frame = -2

Query: 628 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 449
           A+LD+GL R   G RVF            IPH ++       DE           I G H
Sbjct: 101 AILDIGLHRPAPGARVFAVLKGALDAGLKIPHGEEVLP----DEDR---------IKGKH 147

Query: 448 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 317
           VA+Y   L +E PE Y+  FS Y+++G+  + +   +++V   I
Sbjct: 148 VAEYAEKLKEENPEAYKARFSRYLQRGLEPEKLPEHFEEVKKKI 191

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>RL18_METJA (P54044) 50S ribosomal protein L18P|
          Length = 195

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 30/104 (28%), Positives = 53/104 (50%)
 Frame = -2

Query: 628 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 449
           A+LD+GL R T GN +F           +IPH           E+ L +E   + I G H
Sbjct: 101 AVLDIGLHRATKGNAIFAILKGALDAGMEIPHG----------EEILPSE---ERIRGEH 147

Query: 448 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 317
           +  Y   L +++ E+Y+  FS+Y++KG+  + +   ++++ A I
Sbjct: 148 IKAYAEMLKEQDEERYKKQFSKYLEKGLEPEKLPEHFEEIKAKI 191

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>RL18_AERPE (Q9YF94) 50S ribosomal protein L18P|
          Length = 214

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 31/104 (29%), Positives = 52/104 (50%)
 Frame = -2

Query: 628 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 449
           A+LDVGL +   G+RVF           +IPHS++   G   DE+          +   H
Sbjct: 102 AVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG---DER----------VRCEH 148

Query: 448 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 317
           +A +  +L +E  E YQ  FS Y+ +G++ +++    ++V  AI
Sbjct: 149 IAQWAEALKEENAELYQRQFSRYLDRGLNPEELPGHVEEVKKAI 192

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>RL18_METMP (Q6LXD4) 50S ribosomal protein L18P|
          Length = 193

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 33/93 (35%), Positives = 48/93 (51%)
 Frame = -2

Query: 628 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 449
           A+LD GL R T G  +F           DIPH DK  A    DE+ L+         G H
Sbjct: 101 AVLDKGLHRATKGAAIFAVLKGALDAGMDIPHGDKIIA----DEERLN---------GTH 147

Query: 448 VADYMRSLADEEPEKYQTHFSEYIKKGISADDM 350
           V +Y  SL  E+ + Y+  FS+Y++KG++ +D+
Sbjct: 148 VKNYAESLK-EDADAYKKQFSKYLEKGLNPEDL 179

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>RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P|
          Length = 203

 Score = 50.1 bits (118), Expect = 6e-06
 Identities = 30/104 (28%), Positives = 51/104 (49%)
 Frame = -2

Query: 628 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 449
           A+LD+GL     G+ VF           ++PHS + F            E +R  I G H
Sbjct: 102 AILDIGLHPPVRGSSVFAVLKGAVDAGLNVPHSPEIFP-----------EDYR--IRGEH 148

Query: 448 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 317
           +A+Y R L +++ EK++  F  Y++KG+  + +   + +V A I
Sbjct: 149 IAEYARMLKEQDEEKFRRQFGGYLEKGLDPEKLPEHFDEVKARI 192

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>RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P|
          Length = 201

 Score = 49.7 bits (117), Expect = 7e-06
 Identities = 29/104 (27%), Positives = 53/104 (50%)
 Frame = -2

Query: 628 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 449
           A+LD+GL   T G+ +F           ++PHS++ +            E +R  I G H
Sbjct: 102 AILDIGLHPPTRGSSIFAVLKGAVDAGLNVPHSEEIYP-----------EDYR--INGEH 148

Query: 448 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 317
           +A+Y ++L +E+   Y+  FS Y+ KG+  + +   +++V A I
Sbjct: 149 IANYAKALKEEDEALYRKQFSGYLVKGLEPEKLPEHFEEVKAKI 192

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>RL18_PYRHO (O59438) 50S ribosomal protein L18P|
          Length = 203

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 27/104 (25%), Positives = 52/104 (50%)
 Frame = -2

Query: 628 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 449
           A+LD+GL     G+ +F           ++PHS + F            E +R  I G H
Sbjct: 102 AILDIGLHPPVRGSSIFAVLKGAIDAGLNVPHSPEIFP-----------EDYR--IRGEH 148

Query: 448 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 317
           +A+Y R L +++ ++++  F  Y++KG+  + +   +++V A I
Sbjct: 149 IAEYARMLKEQDEDRFRRQFGGYLEKGLDPEKLPEHFEEVKARI 192

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>RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)|
          Length = 203

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 29/104 (27%), Positives = 50/104 (48%)
 Frame = -2

Query: 628 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 449
           A+LD+GL     G+ VF           ++PHS + F     DE           I G H
Sbjct: 102 AILDIGLHPPVRGSSVFAVLKGAVDAGLNVPHSPEIFP----DEYR---------IRGEH 148

Query: 448 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 317
           +A+Y + L +++ EK++  F  Y+ KG+  + +   +++V A I
Sbjct: 149 IAEYAKMLKEQDEEKFRRQFGGYLVKGLDPEKLPEHFEEVKARI 192

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>RL18_SULTO (Q975J9) 50S ribosomal protein L18P|
          Length = 196

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 28/106 (26%), Positives = 50/106 (47%)
 Frame = -2

Query: 628 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 449
           A+ D+GL     G+R+F            IP  D    G K+D            I G H
Sbjct: 102 AVADIGLFVPVKGSRIFTAIKGAIDAGLSIPVGD---LGIKEDR-----------IKGVH 147

Query: 448 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRA 311
           +A Y + L  E PE ++  FS+Y+++G+   D+ + ++++   I++
Sbjct: 148 IASYAQKLEAENPELFKRLFSKYLERGLHPKDLPSHFEEILNKIKS 193

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>RL18_NANEQ (Q74MJ4) 50S ribosomal protein L18P|
          Length = 195

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 30/104 (28%), Positives = 51/104 (49%)
 Frame = -2

Query: 628 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 449
           A+LD+G  ++T GN ++           +IPHS          E  L +E     I G H
Sbjct: 101 AVLDIGRYKSTKGNALYAVLKGALDAGLNIPHS----------ETILPSE---DRIRGEH 147

Query: 448 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 317
           +A+Y + L + E E Y+  FS Y+K+G+  + +   +++V   I
Sbjct: 148 IANYAKMLKENE-ELYKKQFSRYLKEGLDPEQLPNHFEEVKQKI 190

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>RL18_METVA (P14033) 50S ribosomal protein L18P|
          Length = 195

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 30/104 (28%), Positives = 51/104 (49%)
 Frame = -2

Query: 628 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 449
           A+LD GL R T G  +F           DIP  ++  A    DE+ L+         G H
Sbjct: 103 AILDKGLHRATKGAAIFAVLKGALDAGMDIPCGEEIIA----DEERLN---------GTH 149

Query: 448 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 317
           +  Y   L ++E E Y+  FS+Y++KG++ +D+   ++++   I
Sbjct: 150 IKQYAELLKEDE-EAYKKQFSKYLEKGLNPEDLPEHFEELKGKI 192

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>RL18_SULSO (Q9UX88) 50S ribosomal protein L18P|
          Length = 199

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 25/103 (24%), Positives = 44/103 (42%)
 Frame = -2

Query: 619 DVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVAD 440
           D+GL   + GNRVF            IP                D  I    I G H+A 
Sbjct: 108 DIGLHVPSKGNRVFYVIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAK 153

Query: 439 YMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRA 311
           Y   L  E  + Y   FS Y+++G++ +++ + ++++   I++
Sbjct: 154 YAEKLKSENSDLYSKLFSRYLQRGLNPENLPSHFEEILNKIKS 196

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>RL18_METTH (O26130) 50S ribosomal protein L18P|
          Length = 192

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 28/104 (26%), Positives = 47/104 (45%)
 Frame = -2

Query: 628 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 449
           A+LD+GL     G++VF           ++PH +        DE           I G H
Sbjct: 101 AVLDIGLRPAIRGSKVFAALKGAVDAGLNVPHGE----SVLPDESR---------IRGEH 147

Query: 448 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 317
           + +Y  SL +EE  K    FS+Y+++G+S  D+   + ++   I
Sbjct: 148 IMEYAESLDEEELRK---RFSKYLERGLSPVDLPEHFDEIKKRI 188

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>RL18_ARCFU (O28373) 50S ribosomal protein L18P|
          Length = 189

 Score = 38.1 bits (87), Expect = 0.022
 Identities = 28/95 (29%), Positives = 41/95 (43%)
 Frame = -2

Query: 628 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 449
           A+LD+GL   T G+RVF           ++PHSD+      +             I G H
Sbjct: 103 AVLDIGLHTPTRGSRVFAVLRGAVEGGLEVPHSDEVLPDDSR-------------IRGEH 149

Query: 448 VADYMRSLADEEPEKYQTHFSEYIKKGISADDMEA 344
           +A Y     +  PE+    F EY K+G+   D+ A
Sbjct: 150 IAAYY----EMNPER----FGEYEKRGLKPSDLPA 176

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>RL18_SULAC (O05640) 50S ribosomal protein L18P|
          Length = 197

 Score = 37.7 bits (86), Expect = 0.029
 Identities = 24/88 (27%), Positives = 36/88 (40%)
 Frame = -2

Query: 628 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 449
           A+ D+GL     G R+F            +P  D    G  KD            + G H
Sbjct: 102 AVSDIGLFVPVKGGRIFAVIKGAIDAGLKVPVGD---LGKLKDR-----------VNGSH 147

Query: 448 VADYMRSLADEEPEKYQTHFSEYIKKGI 365
           ++ Y + L +E  E Y   FS YI++G+
Sbjct: 148 ISAYAQKLKNENQELYNKLFSSYIQRGL 175

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>RL18_HALSA (P50562) 50S ribosomal protein L18P (HCuL18) (HSal18) (HHal18)|
           (HL13)
          Length = 182

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
 Frame = -2

Query: 628 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 449
           A+LD+GL   T G++VF           D+PH+D   A + +               G H
Sbjct: 100 AVLDIGLNTATPGSKVFAIQEGAIDAGLDVPHNDSVLADWSRTR-------------GEH 146

Query: 448 VADYMRSL------ADEEPEKYQTHFSE 383
           +A+Y  SL       D +      HF E
Sbjct: 147 IAEYAESLDEPLYSGDFDATALPAHFDE 174

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>RL18_HALMA (P14123) 50S ribosomal protein L18P (Hmal18) (Hl12)|
          Length = 186

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = -2

Query: 628 ALLDVGLIRTTTGNRVFXXXXXXXXXXXDIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGH 449
           A+LD+GL   T G++VF           DIPH+D   A +++               G H
Sbjct: 100 AVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTR-------------GAH 146

Query: 448 VADYMRSLADEEP 410
           +A+Y   L  EEP
Sbjct: 147 IAEYDEQL--EEP 157

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>ZN674_HUMAN (Q2M3X9) Zinc finger protein 674|
          Length = 581

 Score = 33.5 bits (75), Expect = 0.55
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = -2

Query: 400 QTHFSEYIKKGISADDMEAVYKKVHAAIR---ADPSMAKSTKPAPKTHKRYNPKKLTYE 233
           +TH  +   KGI       +Y+++H + +   ++   A   KP+P  H R + K+  YE
Sbjct: 328 KTHIRQAFYKGIKCTTSSLIYQRIHTSEKPQCSEHGKASDEKPSPTKHWRTHTKENIYE 386

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>SRYD_DROME (P07664) Serendipity locus protein delta|
          Length = 433

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = -2

Query: 532 SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 353
           +D  F    KD++  D EI R+++             DEE E+      E+I + +   D
Sbjct: 126 ADALFVELVKDQEESDTEIKREFV-------------DEEEEEDDDDDDEFICEDVDVGD 172

Query: 352 MEAVYKK 332
            EA+Y K
Sbjct: 173 SEALYGK 179

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>MYF6_FUGRU (Q6SYV5) Myogenic factor 6 (Myf-6) (Muscle-specific regulatory|
           factor 4)
          Length = 239

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +2

Query: 536 GNVQTTVQSSLKCTKHTVSSRSPDKTNIQE 625
           GN +++  SSL C    VSS S DKTN+++
Sbjct: 205 GNCESSATSSLLCLSSIVSSISDDKTNLRQ 234

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>UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstream binding|
           factor 1-A) (UBF-1-A) (xUBF-1)
          Length = 677

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = -2

Query: 442 DYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPK 272
           DY + LA+++   Y+T F  ++ KG+S+ D  A YK+ ++  R   S AK   P  K
Sbjct: 531 DYYKKLAEDQQRVYRTQFDTWM-KGLSSQD-RAAYKEQNSNKR--KSTAKIQVPVAK 583

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>SCNNB_RAT (P37090) Amiloride-sensitive sodium channel beta-subunit|
           (Epithelial Na+ channel beta subunit) (Beta ENaC)
           (Nonvoltage-gated sodium channel 1 beta subunit) (SCNEB)
           (Beta NaCH)
          Length = 638

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 391 SEFGTSRVPHLLATSCSQQHALHRCTCGESQHP 489
           S++ T+        SC Q H +H C+CG   +P
Sbjct: 373 SDYNTTYSIQACLHSCFQDHMIHNCSCGHYLYP 405

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>CTR3_MOUSE (P70423) Cationic amino acid transporter 3 (CAT-3) (Solute carrier|
           family 7 member 3) (Cationic amino acid transporter y+)
          Length = 618

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +2

Query: 392 VSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLLETSKSLVT 532
           +S  L G ++   PHV++  P    LA+ L +  LLVL  +  +LVT
Sbjct: 144 ISRTLKGTILLKMPHVLAEYPDFFALALVLLLTGLLVLGASKSALVT 190

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>NCKP1_ARATH (Q5S2C4) Protein NAP1 (Nck-associated protein 1) (AtNAP1)|
           (AtNAP125) (p125Nap1) (NAP of plants) (ARP2/3 regulatory
           protein subunit NAPP) (Protein GNARLED)
          Length = 1425

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = +2

Query: 329 NLLVNCFHVIS*DSLLDVLTEVSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLL 508
           ++L N  H +    L +V +    VLLG+L+C  P  +  + SID+  V L    ++ L 
Sbjct: 302 DILTNSAHPMRAQDLANVTSYREWVLLGYLVC--PDELLRVTSIDIALVVLKENLVVTLF 359

Query: 509 ETSKSL 526
               SL
Sbjct: 360 RDEVSL 365

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>RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)|
          Length = 101

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = -2

Query: 382 YIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 206
           Y +K +   D        HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 30  YARKRLVIQDKNKYNTPAHAAIRENPVYEKKPKREVK-KKRWNRPKMSLAQKKDRVAQK 87

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>ODO1_RICCN (Q92J42) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)|
           (Alpha-ketoglutarate dehydrogenase)
          Length = 928

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 10/103 (9%)
 Frame = -2

Query: 535 HSDKRFAGFKKDEKSLDAEIHRKYIYGG-------HVADYMRSLADEEPEKYQTHFSEYI 377
           H D  F G     +SL       Y  GG       +   +  + AD    +Y T F++ I
Sbjct: 350 HGDAAFCGQGVVAESLSMSPLAAYDIGGILHFVINNQLGFTANAADTRASRYSTEFAKII 409

Query: 376 KKGI---SADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRY 257
              I   + DD+EAV K  + A+       K        +++Y
Sbjct: 410 AAPILHVNGDDIEAVLKATNIAVEYRQKFGKDVVVEIICYRKY 452

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>VTA1_YEAST (Q06263) Vacuolar protein sorting-associated protein VTA1|
           (VPS20-associated protein 1)
          Length = 330

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 25/84 (29%), Positives = 40/84 (47%)
 Frame = -2

Query: 424 ADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKK 245
           AD   E+ QT   +  +  I+ D+ + V K+V     + PS     +PA   HK Y   +
Sbjct: 231 ADSVNEEEQT--VDKNEDAITKDEQQVVKKEVDLTRPSAPS-----EPAAAEHKSYTKDE 283

Query: 244 LTYEERKASLVERLNALNNSAGAA 173
           LT    +AS +E++  L   A +A
Sbjct: 284 LTKIMDRASKIEQIQKLAKYAISA 307


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,582,451
Number of Sequences: 219361
Number of extensions: 1502516
Number of successful extensions: 5090
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 4825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5064
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result