>GLMS_HAEDU (Q7VKK4) Glucosamine--fructose-6-phosphate aminotransferase|
           [isomerizing] (EC 2.6.1.16) (Hexosephosphate
           aminotransferase) (D-fructose-6-phosphate
           amidotransferase) (GFAT)
           (L-glutamine-D-fructose-6-phosphate amidotransferase)
           (Glucosamine-6-ph
          Length = 609

 Score = 32.7 bits (73), Expect = 0.96
 Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
 Frame = +2

Query: 74  KXWYTKLLKLG*NQETSXNQPLRRSI-EPQDLVITMXTINESTDLGLARHLPKNGAFLRS 250
           + W+ ++  +  N E +     R+ + +P  L+IT+    E+ D   A  L K   ++ +
Sbjct: 311 RYWFEEIANISCNVEIASEFRYRKFVVQPNSLLITLSQSGETADTLAALRLAKQSGYMAA 370

Query: 251 LSICWYSQAISLIAR*SIFS 310
           ++IC  + A S + R S F+
Sbjct: 371 MTIC--NVASSSLVRESDFA 388

>RAD50_PYRAB (Q9UZC8) DNA double-strand break repair rad50 ATPase|
          Length = 880

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
 Frame = -2

Query: 435 GRKQGTSLKAPSLP-STESFVCKIRLAEAFISLEHPLVTKLRQEKIDYRAIKDMACEYQQ 259
           GRK+G   K   +  S E    KI   E  +      + KL++++ +YR +K    EY+ 
Sbjct: 256 GRKKGLEEKIVQIERSIEEKKAKISELEEIVKD----IPKLQEKEKEYRKLKGFRDEYES 311

Query: 258 MLKLLRKAPFLGRWRAKPRSVDSFI 184
            L+ L K   L +W ++ ++++  I
Sbjct: 312 KLRRLEKE--LSKWESELKAIEEVI 334

>VAL1_PYMVV (P27258) AL1 protein|
          Length = 361

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +3

Query: 501 INDKAKLLFNSSTKEWCMKILSEQNTKEFKMATNHINC 614
           +ND A    NS TKE  MKI+ E+  ++F    ++++C
Sbjct: 130 VNDAAAEALNSGTKEAAMKIIKEKLPEKFLFQYHNLSC 167

>YIM0_YEAST (P40475) Hypothetical 61.8 kDa protein in KGD1-SIM1 intergenic|
           region
          Length = 563

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = -3

Query: 107 TPILAVLCTNXF-SLFVACVLLHNTDVL 27
           TP+ AVLCT+ F SLF  C+L  +T ++
Sbjct: 444 TPLAAVLCTSAFASLFSNCILTFSTTLI 471

>GLMS_NEIMA (Q9JWN9) Glucosamine--fructose-6-phosphate aminotransferase|
           [isomerizing] (EC 2.6.1.16) (Hexosephosphate
           aminotransferase) (D-fructose-6-phosphate
           amidotransferase) (GFAT)
           (L-glutamine-D-fructose-6-phosphate amidotransferase)
           (Glucosamine-6-ph
          Length = 611

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = +2

Query: 41  CEEAHMLQIS*KXWYTKLLKLG*NQETSXNQPLRRSI-EPQDLVITMXTINESTDLGLAR 217
           C  ++   ++ K W   + K+  + E +     R  I +P  LVIT+    E+ D   A 
Sbjct: 302 CGTSYYAALTAKYWLESIAKIPSDVEIASEYRYRSVIADPDQLVITISQSGETLDTMEAL 361

Query: 218 HLPKNGAFLRSLSIC 262
              K+     SLSIC
Sbjct: 362 KYAKSLGHRHSLSIC 376


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,407,399
Number of Sequences: 219361
Number of extensions: 1657622
Number of successful extensions: 3704
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3704
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)