ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6j22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 109 1e-20
2dbj|AK106642.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 2e-19
3emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4,... 101 3e-18
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 101 3e-18
5ref|XM_474404.1| Oryza sativa (japonica cultivar-group), predic... 96 2e-16
6dbj|AK105871.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-16
7dbj|AK071538.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-16
8gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete ... 42 2.3
9gb|AC103405.14| Mus musculus chromosome 19, clone RP23-98J4, com... 42 2.3
10gb|AC102751.14| Mus musculus chromosome 19, clone RP24-531N3, co... 42 2.3
11gb|AE006156.1| Pasteurella multocida subsp. multocida str. Pm70 ... 42 2.3
12emb|AL954342.10| Human DNA sequence from clone RP11-343L13 on ch... 42 2.3
13emb|AL627429.8| Human DNA sequence from clone RP11-361G9 on chro... 42 2.3
14emb|AL359508.13| Human DNA sequence from clone RP11-267K7 on chr... 42 2.3
15gb|AF336797.2|AF336797 Homo sapiens small-conductance calcium-ac... 42 2.3
16dbj|AK086872.1| Mus musculus 0 day neonate lung cDNA, RIKEN full... 42 2.3
17gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome 42 2.3
18gb|AC005224.1|AC005224 Homo sapiens chromosome 17, clone hRPK.21... 42 2.3
19gb|AC118246.15| Mus musculus chromosome 3, clone RP23-302N4, com... 40 8.9
20gb|AC119876.9| Mus musculus chromosome 3, clone RP24-309A12, com... 40 8.9
21gb|AC124614.11| Mus musculus chromosome 10, clone RP24-417L12, c... 40 8.9
22gb|AC125060.4| Mus musculus BAC clone RP23-406B22 from chromosom... 40 8.9
23gb|AC129318.4| Mus musculus BAC clone RP23-464B17 from chromosom... 40 8.9
24gb|AC129310.6| Mus musculus BAC clone RP24-348D18 from chromosom... 40 8.9
25gb|AC111012.3| Mus musculus BAC clone RP24-146N3 from 8, complet... 40 8.9
26ref|XM_670876.1| Plasmodium berghei strain ANKA hypothetical pro... 40 8.9
27emb|AL451044.7| Human DNA sequence from clone RP11-293K19 on chr... 40 8.9
28emb|AL356452.12| Human DNA sequence from clone RP11-562L19 on ch... 40 8.9
29emb|AL031000.1|HS795G23 Human DNA sequence from clone RP4-795G23... 40 8.9
30emb|AL592185.35| Mouse DNA sequence from clone RP23-341J22 on ch... 40 8.9
31emb|BX571948.8| Zebrafish DNA sequence from clone DKEY-185P13 in... 40 8.9
32emb|AL928660.4| Zebrafish DNA sequence from clone CH211-257L15, ... 40 8.9
33emb|X65201.1|MNPVE6 Mastomys natalensis Papillomavirus E6 gene 40 8.9
34gb|AE001439.1| Helicobacter pylori J99, complete genome 40 8.9
35gb|AE000511.1| Helicobacter pylori 26695, complete genome 40 8.9
36gb|AC152822.2| Mus musculus BAC clone RP24-319O19 from 6, comple... 40 8.9
37gb|AC131680.4| Mus musculus BAC clone RP23-346F8 from 8, complet... 40 8.9
38gb|U01834.1|MRU01834 Multimammate rat papillomavirus, complete g... 40 8.9
39emb|AL845256.3| Mouse DNA sequence from clone RP23-58M18 on chro... 40 8.9
40emb|AL772383.4| Mouse DNA sequence from clone RP23-22H5 on chrom... 40 8.9 
>emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F12, complete
             sequence
          Length = 84361

 Score =  109 bits (55), Expect = 1e-20
 Identities = 124/147 (84%)
 Strand = Plus / Minus

                                                                         
Query: 370   cttgcagacaaatgactcggtggagggtaaggatggtgcctttaaagatgtgccttgttt 429
             ||||||||  |||||||| ||||| ||| || ||| ||||||| ||||||| || |||||
Sbjct: 34233 cttgcagagcaatgactcagtggatggtgagcatgctgcctttgaagatgtaccctgttt 34174

                                                                         
Query: 430   cctcccagttgttcctaaaagaacttcatgcaaaccagatttattctggcatattgagta 489
              ||||||||||||||||| | ||||||||| ||||||||||| |||  |||||| |||||
Sbjct: 34173 tctcccagttgttcctaagacaacttcatgaaaaccagatttgttccagcatatcgagta 34114

                                        
Query: 490   cctaataaaacattaatgacaaagcta 516
             |||| ||||| || |||  ||||||||
Sbjct: 34113 cctagtaaaatataaattgcaaagcta 34087



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                       
Query: 227   aaaaatggagcctttctaagaagcttaagcatctgctggtactcacaagccatatcct 284
             |||||||||||||| |||||||||| |||  |||||||||| |||  |||||||||||
Sbjct: 34636 aaaaatggagccttcctaagaagctcaagtgtctgctggtattcatgagccatatcct 34579
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>dbj|AK106642.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-E06, full
            insert sequence
          Length = 2214

 Score =  105 bits (53), Expect = 2e-19
 Identities = 158/193 (81%)
 Strand = Plus / Minus

                                                                        
Query: 324  tgactaatggatgttcaagtgatatgaaggcctctgccaatcttatcttgcagacaaatg 383
            ||||||||||||||||||   | |  ||||| |||  ||| ||| |||||||||  ||||
Sbjct: 1175 tgactaatggatgttcaatcaacacaaaggcttctagcaaccttctcttgcagagcaatg 1116

                                                                        
Query: 384  actcggtggagggtaaggatggtgcctttaaagatgtgccttgtttcctcccagttgttc 443
            |||| ||||| ||| || ||| ||||||| ||||||| || ||||| |||||||||||||
Sbjct: 1115 actcagtggatggtgagcatgctgcctttgaagatgtaccctgttttctcccagttgttc 1056

                                                                        
Query: 444  ctaaaagaacttcatgcaaaccagatttattctggcatattgagtacctaataaaacatt 503
            |||| | ||||||||| ||||| ||||| |||  |||||| ||||||||| ||||| || 
Sbjct: 1055 ctaagacaacttcatgaaaaccggatttgttccagcatatcgagtacctagtaaaatata 996

                         
Query: 504  aatgacaaagcta 516
            |||  ||||||||
Sbjct: 995  aattgcaaagcta 983



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 206  ggcttagcacgccatctgcctaaaaatggagcctttctaagaagcttaagcatctgctgg 265
            |||||||||| ||| | ||  |||||||||||||| || ||||||| |||  ||||||||
Sbjct: 1293 ggcttagcaccccaccggctaaaaaatggagccttcctgagaagctcaagtgtctgctgg 1234

                                
Query: 266  tactcacaagccatatcctt 285
            || |||  ||||||||||||
Sbjct: 1233 tattcatgagccatatcctt 1214
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>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06,
              complete sequence
          Length = 148023

 Score =  101 bits (51), Expect = 3e-18
 Identities = 123/147 (83%)
 Strand = Plus / Minus

                                                                          
Query: 370    cttgcagacaaatgactcggtggagggtaaggatggtgcctttaaagatgtgccttgttt 429
              ||||||||  |||||||| ||||| ||| || ||| ||||||| ||||||| || |||||
Sbjct: 136415 cttgcagagcaatgactcagtggatggtgagcatgctgcctttgaagatgtaccctgttt 136356

                                                                          
Query: 430    cctcccagttgttcctaaaagaacttcatgcaaaccagatttattctggcatattgagta 489
               ||||||||||||||||| | ||||||||| ||||| ||||| |||  |||||| |||||
Sbjct: 136355 tctcccagttgttcctaagacaacttcatgaaaaccggatttgttccagcatatcgagta 136296

                                         
Query: 490    cctaataaaacattaatgacaaagcta 516
              |||| ||||| || |||  ||||||||
Sbjct: 136295 cctagtaaaatataaattgcaaagcta 136269



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 66/79 (83%)
 Strand = Plus / Minus

                                                                          
Query: 206    ggcttagcacgccatctgcctaaaaatggagcctttctaagaagcttaagcatctgctgg 265
              |||||||||| ||| | ||  |||||||||||||| || ||||||| |||  ||||||||
Sbjct: 136799 ggcttagcactccaccggctaaaaaatggagccttcctgagaagctcaagtgtctgctgg 136740

                                 
Query: 266    tactcacaagccatatcct 284
              || |||  |||||||||||
Sbjct: 136739 tattcatgagccatatcct 136721
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  101 bits (51), Expect = 3e-18
 Identities = 123/147 (83%)
 Strand = Plus / Minus

                                                                            
Query: 370      cttgcagacaaatgactcggtggagggtaaggatggtgcctttaaagatgtgccttgttt 429
                ||||||||  |||||||| ||||| ||| || ||| ||||||| ||||||| || |||||
Sbjct: 34930302 cttgcagagcaatgactcagtggatggtgagcatgctgcctttgaagatgtaccctgttt 34930243

                                                                            
Query: 430      cctcccagttgttcctaaaagaacttcatgcaaaccagatttattctggcatattgagta 489
                 ||||||||||||||||| | ||||||||| ||||| ||||| |||  |||||| |||||
Sbjct: 34930242 tctcccagttgttcctaagacaacttcatgaaaaccggatttgttccagcatatcgagta 34930183

                                           
Query: 490      cctaataaaacattaatgacaaagcta 516
                |||| ||||| || |||  ||||||||
Sbjct: 34930182 cctagtaaaatataaattgcaaagcta 34930156



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 66/79 (83%)
 Strand = Plus / Minus

                                                                            
Query: 206      ggcttagcacgccatctgcctaaaaatggagcctttctaagaagcttaagcatctgctgg 265
                |||||||||| ||| | ||  |||||||||||||| || ||||||| |||  ||||||||
Sbjct: 34930686 ggcttagcactccaccggctaaaaaatggagccttcctgagaagctcaagtgtctgctgg 34930627

                                   
Query: 266      tactcacaagccatatcct 284
                || |||  |||||||||||
Sbjct: 34930626 tattcatgagccatatcct 34930608
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>ref|XM_474404.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1116

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 138/168 (82%)
 Strand = Plus / Minus

                                                                       
Query: 324 tgactaatggatgttcaagtgatatgaaggcctctgccaatcttatcttgcagacaaatg 383
           ||||||||||||||||||   | |  ||||| |||  ||| ||| |||||||||  ||||
Sbjct: 964 tgactaatggatgttcaatcaacacaaaggcttctagcaaccttctcttgcagagcaatg 905

                                                                       
Query: 384 actcggtggagggtaaggatggtgcctttaaagatgtgccttgtttcctcccagttgttc 443
           |||| ||||| ||| || ||| ||||||| ||||||| || ||||| |||||||||||||
Sbjct: 904 actcagtggatggtgagcatgctgcctttgaagatgtaccctgttttctcccagttgttc 845

                                                           
Query: 444 ctaaaagaacttcatgcaaaccagatttattctggcatattgagtacc 491
           |||| | ||||||||| ||||| ||||| |||  |||||| |||||||
Sbjct: 844 ctaagacaacttcatgaaaaccggatttgttccagcatatcgagtacc 797



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 206  ggcttagcacgccatctgcctaaaaatggagcctttctaagaagcttaagcatctgctgg 265
            |||||||||| ||| | ||  |||||||||||||| || ||||||| |||  ||||||||
Sbjct: 1082 ggcttagcactccaccggctaaaaaatggagccttcctgagaagctcaagtgtctgctgg 1023

                                
Query: 266  tactcacaagccatatcctt 285
            || |||  ||||||||||||
Sbjct: 1022 tattcatgagccatatcctt 1003
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>dbj|AK105871.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B01, full
            insert sequence
          Length = 1666

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 138/168 (82%)
 Strand = Plus / Minus

                                                                        
Query: 324  tgactaatggatgttcaagtgatatgaaggcctctgccaatcttatcttgcagacaaatg 383
            ||||||||||||||||||   | |  ||||| |||  ||| ||| |||||||||  ||||
Sbjct: 1262 tgactaatggatgttcaatcaacacaaaggcttctagcaaccttctcttgcagagcaatg 1203

                                                                        
Query: 384  actcggtggagggtaaggatggtgcctttaaagatgtgccttgtttcctcccagttgttc 443
            |||| ||||| ||| || ||| ||||||| ||||||| || ||||| |||||||||||||
Sbjct: 1202 actcagtggatggtgagcatgctgcctttgaagatgtaccctgttttctcccagttgttc 1143

                                                            
Query: 444  ctaaaagaacttcatgcaaaccagatttattctggcatattgagtacc 491
            |||| | ||||||||| ||||| ||||| |||  |||||| |||||||
Sbjct: 1142 ctaagacaacttcatgaaaaccggatttgttccagcatatcgagtacc 1095



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 206  ggcttagcacgccatctgcctaaaaatggagcctttctaagaagcttaagcatctgctgg 265
            |||||||||| ||| | ||  |||||||||||||| || ||||||| |||  ||||||||
Sbjct: 1380 ggcttagcactccaccggctaaaaaatggagccttcctgagaagctcaagtgtctgctgg 1321

                                
Query: 266  tactcacaagccatatcctt 285
            || |||  ||||||||||||
Sbjct: 1320 tattcatgagccatatcctt 1301
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>dbj|AK071538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099G11, full
            insert sequence
          Length = 1384

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 138/168 (82%)
 Strand = Plus / Minus

                                                                        
Query: 324  tgactaatggatgttcaagtgatatgaaggcctctgccaatcttatcttgcagacaaatg 383
            ||||||||||||||||||   | |  ||||| |||  ||| ||| |||||||||  ||||
Sbjct: 1003 tgactaatggatgttcaatcaacacaaaggcttctagcaaccttctcttgcagagcaatg 944

                                                                        
Query: 384  actcggtggagggtaaggatggtgcctttaaagatgtgccttgtttcctcccagttgttc 443
            |||| ||||| ||| || ||| ||||||| ||||||| || ||||| |||||||||||||
Sbjct: 943  actcagtggatggtgagcatgctgcctttgaagatgtaccctgttttctcccagttgttc 884

                                                            
Query: 444  ctaaaagaacttcatgcaaaccagatttattctggcatattgagtacc 491
            |||| | ||||||||| ||||| ||||| |||  |||||| |||||||
Sbjct: 883  ctaagacaacttcatgaaaaccggatttgttccagcatatcgagtacc 836



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 206  ggcttagcacgccatctgcctaaaaatggagcctttctaagaagcttaagcatctgctgg 265
            |||||||||| ||| | ||  |||||||||||||| || ||||||| |||  ||||||||
Sbjct: 1121 ggcttagcactccaccggctaaaaaatggagccttcctgagaagctcaagtgtctgctgg 1062

                                
Query: 266  tactcacaagccatatcctt 285
            || |||  ||||||||||||
Sbjct: 1061 tattcatgagccatatcctt 1042
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>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 535     caaccaaagaatggtgcatga 555
               |||||||||||||||||||||
Sbjct: 1122160 caaccaaagaatggtgcatga 1122140
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>gb|AC103405.14| Mus musculus chromosome 19, clone RP23-98J4, complete sequence
          Length = 227074

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 154   acctcaagatctggtcatcac 174
             |||||||||||||||||||||
Sbjct: 21964 acctcaagatctggtcatcac 21944
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>gb|AC102751.14| Mus musculus chromosome 19, clone RP24-531N3, complete sequence
          Length = 178150

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 154    acctcaagatctggtcatcac 174
              |||||||||||||||||||||
Sbjct: 174713 acctcaagatctggtcatcac 174693
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>gb|AE006156.1| Pasteurella multocida subsp. multocida str. Pm70 section 123 of 204 of
             the complete genome
          Length = 13495

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 535   caaccaaagaatggtgcatga 555
             |||||||||||||||||||||
Sbjct: 11702 caaccaaagaatggtgcatga 11682
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>emb|AL954342.10| Human DNA sequence from clone RP11-343L13 on chromosome 1 Contains part
             of the KCNN3 gene for potassium intermediate/small
             conductance calcium-activated channel, subfamily N, member
             3, complete sequence
          Length = 28342

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 348   tgaaggcctctgccaatctta 368
             |||||||||||||||||||||
Sbjct: 10620 tgaaggcctctgccaatctta 10640
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>emb|AL627429.8| Human DNA sequence from clone RP11-361G9 on chromosome 10 Contains part
             of the gene for a novel NHL repeat domain containing
             protein (FLJ33312, FLJ25621), complete sequence
          Length = 23418

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 414   aagatgtgccttgtttcctcc 434
             |||||||||||||||||||||
Sbjct: 18337 aagatgtgccttgtttcctcc 18317
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>emb|AL359508.13| Human DNA sequence from clone RP11-267K7 on chromosome 10, complete
             sequence
          Length = 60298

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 238   ctttctaagaagcttaagcat 258
             |||||||||||||||||||||
Sbjct: 49626 ctttctaagaagcttaagcat 49606
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>gb|AF336797.2|AF336797 Homo sapiens small-conductance calcium-activated potassium channel
              (KCNN3) gene, complete cds
          Length = 163217

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 348    tgaaggcctctgccaatctta 368
              |||||||||||||||||||||
Sbjct: 102479 tgaaggcctctgccaatctta 102459
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>dbj|AK086872.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched
            library, clone:E030007B21 product:unclassifiable, full
            insert sequence
          Length = 2098

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 154  acctcaagatctggtcatcac 174
            |||||||||||||||||||||
Sbjct: 1789 acctcaagatctggtcatcac 1769
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>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome
          Length = 1830138

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 535     caaccaaagaatggtgcatga 555
               |||||||||||||||||||||
Sbjct: 1065917 caaccaaagaatggtgcatga 1065897
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>gb|AC005224.1|AC005224 Homo sapiens chromosome 17, clone hRPK.214_O_1, complete sequence
          Length = 166687

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 97    aaaattggggtgaaatcaaga 117
             |||||||||||||||||||||
Sbjct: 62819 aaaattggggtgaaatcaaga 62799
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>gb|AC118246.15| Mus musculus chromosome 3, clone RP23-302N4, complete sequence
          Length = 157517

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 600    aaccatattaactgtgttgt 619
              ||||||||||||||||||||
Sbjct: 122891 aaccatattaactgtgttgt 122872
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>gb|AC119876.9| Mus musculus chromosome 3, clone RP24-309A12, complete sequence
          Length = 165926

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 600    aaccatattaactgtgttgt 619
              ||||||||||||||||||||
Sbjct: 155887 aaccatattaactgtgttgt 155906
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>gb|AC124614.11| Mus musculus chromosome 10, clone RP24-417L12, complete sequence
          Length = 173306

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 409   ctttaaagatgtgccttgtttcct 432
             ||||||| ||||||||||||||||
Sbjct: 46175 ctttaaatatgtgccttgtttcct 46198
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>gb|AC125060.4| Mus musculus BAC clone RP23-406B22 from chromosome 10, complete
             sequence
          Length = 178936

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 409   ctttaaagatgtgccttgtttcct 432
             ||||||| ||||||||||||||||
Sbjct: 25904 ctttaaatatgtgccttgtttcct 25881
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>gb|AC129318.4| Mus musculus BAC clone RP23-464B17 from chromosome 6, complete sequence
          Length = 162905

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 600   aaccatattaactgtgttgt 619
             ||||||||||||||||||||
Sbjct: 10490 aaccatattaactgtgttgt 10471
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>gb|AC129310.6| Mus musculus BAC clone RP24-348D18 from chromosome 8, complete sequence
          Length = 130946

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    gcacacatgctacaaataag 69
             ||||||||||||||||||||
Sbjct: 54979 gcacacatgctacaaataag 54960
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>gb|AC111012.3| Mus musculus BAC clone RP24-146N3 from 8, complete sequence
          Length = 155637

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    gcacacatgctacaaataag 69
             ||||||||||||||||||||
Sbjct: 10896 gcacacatgctacaaataag 10877
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>ref|XM_670876.1| Plasmodium berghei strain ANKA hypothetical protein (PB001119.01.0)
           partial mRNA
          Length = 1452

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 26  tcaaaacatcagtattgtgaagaa 49
           ||||||||||| ||||||||||||
Sbjct: 391 tcaaaacatcaatattgtgaagaa 414
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>emb|AL451044.7| Human DNA sequence from clone RP11-293K19 on chromosome 1 Contains part
             of the DOCK7 gene for dedicator of cytokinesis 7, complete
             sequence
          Length = 127370

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 21    actgttcaaaacatcagtattgtg 44
             |||||||| |||||||||||||||
Sbjct: 92942 actgttcagaacatcagtattgtg 92919
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>emb|AL356452.12| Human DNA sequence from clone RP11-562L19 on chromosome 13, complete
             sequence
          Length = 81586

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 414   aagatgtgccttgtttcctc 433
             ||||||||||||||||||||
Sbjct: 26718 aagatgtgccttgtttcctc 26699
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>emb|AL031000.1|HS795G23 Human DNA sequence from clone RP4-795G23 on chromosome Xq13.1-21.1
              Contains the TBX22 gene for T-box 22, complete sequence
          Length = 132029

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 409    ctttaaagatgtgccttgtt 428
              ||||||||||||||||||||
Sbjct: 131899 ctttaaagatgtgccttgtt 131880
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>emb|AL592185.35| Mouse DNA sequence from clone RP23-341J22 on chromosome 11 Contains a
             novel gene, the Nos2 gene for inducible macrophage nitric
             oxide synthase 2 and the 3' end of the Lgals9 gene for
             soluble galactose binding lectin 9, complete sequence
          Length = 178443

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 529   atagttcaaccaaagaatgg 548
             ||||||||||||||||||||
Sbjct: 52997 atagttcaaccaaagaatgg 53016
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>emb|BX571948.8| Zebrafish DNA sequence from clone DKEY-185P13 in linkage group 22,
             complete sequence
          Length = 184751

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 557   gatactgtcagagcaaaatacaaa 580
             |||||||||||||||||| |||||
Sbjct: 84224 gatactgtcagagcaaaacacaaa 84247
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>emb|AL928660.4| Zebrafish DNA sequence from clone CH211-257L15, complete sequence
          Length = 165487

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 489    acctaataaaacattaatga 508
              ||||||||||||||||||||
Sbjct: 164126 acctaataaaacattaatga 164107
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>emb|X65201.1|MNPVE6 Mastomys natalensis Papillomavirus E6 gene
          Length = 624

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 548 gtgcatgaagatactgtcag 567
           ||||||||||||||||||||
Sbjct: 510 gtgcatgaagatactgtcag 529
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>gb|AE001439.1| Helicobacter pylori J99, complete genome
          Length = 1643831

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 578    aaaggagttcaaaatggcaa 597
              ||||||||||||||||||||
Sbjct: 705688 aaaggagttcaaaatggcaa 705669
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>gb|AE000511.1| Helicobacter pylori 26695, complete genome
          Length = 1667867

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 578    aaaggagttcaaaatggcaa 597
              ||||||||||||||||||||
Sbjct: 747941 aaaggagttcaaaatggcaa 747960
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>gb|AC152822.2| Mus musculus BAC clone RP24-319O19 from 6, complete sequence
          Length = 184667

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 600    aaccatattaactgtgttgt 619
              ||||||||||||||||||||
Sbjct: 104014 aaccatattaactgtgttgt 103995
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>gb|AC131680.4| Mus musculus BAC clone RP23-346F8 from 8, complete sequence
          Length = 198162

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    gcacacatgctacaaataag 69
             ||||||||||||||||||||
Sbjct: 29345 gcacacatgctacaaataag 29364
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>gb|U01834.1|MRU01834 Multimammate rat papillomavirus, complete genome
          Length = 7687

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 548 gtgcatgaagatactgtcag 567
           ||||||||||||||||||||
Sbjct: 394 gtgcatgaagatactgtcag 413
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>emb|AL845256.3| Mouse DNA sequence from clone RP23-58M18 on chromosome X, complete
             sequence
          Length = 171398

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 600   aaccatattaactgtgttgt 619
             ||||||||||||||||||||
Sbjct: 10944 aaccatattaactgtgttgt 10925
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>emb|AL772383.4| Mouse DNA sequence from clone RP23-22H5 on chromosome 4, complete
             sequence
          Length = 149147

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 600   aaccatattaactgtgttgt 619
             ||||||||||||||||||||
Sbjct: 36919 aaccatattaactgtgttgt 36900


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,499,550
Number of Sequences: 3902068
Number of extensions: 6499550
Number of successful extensions: 122341
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122159
Number of HSP's gapped (non-prelim): 182
length of query: 652
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 629
effective length of database: 17,143,297,704
effective search space: 10783134255816
effective search space used: 10783134255816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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