ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags6j18 |
|---|---|
| Clone Library Name | barley_pub |
>XTH8_ORYSA (Q76BW5) Xyloglucan endotransglycosylase/hydrolase protein 8| precursor (EC 2.4.1.207) (End-xyloglucan transferase) (OsXTH8) (OsXRT5) Length = 290 Score = 87.4 bits (215), Expect = 1e-17 Identities = 36/53 (67%), Positives = 40/53 (75%) Frame = -3 Query: 416 SACPAGSDAWMSTELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECSRR 258 S CP G+ AW+ ELD LGTVAWAE YMSY+YC DGWRFP GFPAEC R+ Sbjct: 238 SWCPEGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK 290
>XTH25_ARATH (Q38907) Probable xyloglucan endotransglucosylase/hydrolase protein| 25 precursor (EC 2.4.1.207) (At-XTH25) (XTH-25) Length = 284 Score = 61.2 bits (147), Expect = 9e-10 Identities = 27/50 (54%), Positives = 31/50 (62%) Frame = -3 Query: 416 SACPAGSDAWMSTELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAEC 267 S+CPAGS W S LD A + + KYM Y+YCTD RFP GFP EC Sbjct: 233 SSCPAGSPRWFSQRLDLTAEDKMRVVQRKYMIYNYCTDTKRFPQGFPKEC 282
>XTH12_ARATH (Q9FKL9) Probable xyloglucan endotransglucosylase/hydrolase protein| 12 precursor (EC 2.4.1.207) (At-XTH12) (XTH-12) Length = 285 Score = 60.5 bits (145), Expect = 2e-09 Identities = 24/49 (48%), Positives = 32/49 (65%) Frame = -3 Query: 410 CPAGSDAWMSTELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECS 264 C A S++WM T L++ LG + W + YM Y+YCTD RFP G P EC+ Sbjct: 235 CNANSNSWMWTTLNSNQLGQLKWVQKDYMIYNYCTDFKRFPQGLPTECN 283
>XTH13_ARATH (Q9FKL8) Putative xyloglucan endotransglucosylase/hydrolase protein| 13 precursor (EC 2.4.1.207) (At-XTH13) (XTH-13) Length = 284 Score = 58.5 bits (140), Expect = 6e-09 Identities = 23/49 (46%), Positives = 31/49 (63%) Frame = -3 Query: 410 CPAGSDAWMSTELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECS 264 C A S++WM T L++ G + W + YM Y+YCTD RFP G P EC+ Sbjct: 234 CNANSNSWMWTTLNSNQYGQMKWVQDDYMIYNYCTDFKRFPQGLPTECN 282
>XTH20_ARATH (Q9FI31) Probable xyloglucan endotransglucosylase/hydrolase protein| 20 precursor (EC 2.4.1.207) (At-XTH20) (XTH-20) Length = 282 Score = 58.2 bits (139), Expect = 8e-09 Identities = 27/51 (52%), Positives = 32/51 (62%) Frame = -3 Query: 416 SACPAGSDAWMSTELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECS 264 S+C A S +W + LD K V WA+ KYM Y+YCTD RFP G P ECS Sbjct: 233 SSCSANS-SWFTQVLDFKGKNRVKWAQRKYMVYNYCTDKKRFPQGAPPECS 282
>XTH22_ARATH (Q38857) Xyloglucan endotransglucosylase/hydrolase protein 22| precursor (EC 2.4.1.207) (At-XTH22) (XTH-22) (Touch protein 4) Length = 284 Score = 56.2 bits (134), Expect = 3e-08 Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 6/56 (10%) Frame = -3 Query: 416 SACPAGSD------AWMSTELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAEC 267 S+CP S +W+S ELD+ A + W + YM Y+YCTD RFP G P EC Sbjct: 226 SSCPNASKQGTTTGSWLSQELDSTAQQRMRWVQRNYMIYNYCTDAKRFPQGLPKEC 281
>XTH23_ARATH (Q38910) Probable xyloglucan endotransglucosylase/hydrolase protein| 23 precursor (EC 2.4.1.207) (At-XTH23) (XTH-23) Length = 286 Score = 55.5 bits (132), Expect = 5e-08 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 5/55 (9%) Frame = -3 Query: 416 SACP-----AGSDAWMSTELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAEC 267 S+CP + +W+S ELD+ + W ++ YM Y+YCTD RFP G P EC Sbjct: 229 SSCPNVSGQGSTGSWLSQELDSTGQEQMRWVQNNYMIYNYCTDAKRFPQGLPREC 283
>XTH18_ARATH (Q9M0D2) Probable xyloglucan endotransglucosylase/hydrolase protein| 18 precursor (EC 2.4.1.207) (At-XTH18) (XTH-18) Length = 282 Score = 54.3 bits (129), Expect = 1e-07 Identities = 24/51 (47%), Positives = 32/51 (62%) Frame = -3 Query: 416 SACPAGSDAWMSTELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECS 264 S+CPA S +W + +LD+ + +SKYM Y+YC D RFP G P ECS Sbjct: 233 SSCPANS-SWFTQQLDSNGQTRMKGVQSKYMVYNYCNDKRRFPRGVPVECS 282
>XTH14_ARATH (Q9ZSU4) Xyloglucan endotransglucosylase/hydrolase protein 14| precursor (EC 2.4.1.207) (At-XTH14) (XTH-14) Length = 287 Score = 53.1 bits (126), Expect = 2e-07 Identities = 21/48 (43%), Positives = 28/48 (58%) Frame = -3 Query: 410 CPAGSDAWMSTELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAEC 267 C S++WM T L+ G + W + +M Y+YCTD RFP G P EC Sbjct: 238 CEPNSNSWMWTTLNPAQYGKMMWVQRDFMIYNYCTDFKRFPQGLPKEC 285
>XTH19_ARATH (Q9M0D1) Probable xyloglucan endotransglucosylase/hydrolase protein| 19 precursor (EC 2.4.1.207) (At-XTH19) (XTH-19) Length = 277 Score = 53.1 bits (126), Expect = 2e-07 Identities = 24/51 (47%), Positives = 31/51 (60%) Frame = -3 Query: 416 SACPAGSDAWMSTELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECS 264 S CPA S W + +LD+ + +SKYM Y+YC+D RFP G P ECS Sbjct: 228 SVCPANSQ-WFTQKLDSNGQTRMKGVQSKYMVYNYCSDKKRFPRGVPPECS 277
>XTH17_ARATH (O80803) Probable xyloglucan endotransglucosylase/hydrolase protein| 17 precursor (EC 2.4.1.207) (At-XTH17) (XTH-17) Length = 282 Score = 52.4 bits (124), Expect = 4e-07 Identities = 24/51 (47%), Positives = 32/51 (62%) Frame = -3 Query: 416 SACPAGSDAWMSTELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECS 264 S+C A S W + +LD+ + +SKYM Y+YCTD RFP G PAEC+ Sbjct: 233 SSCSANSP-WFTQKLDSNGQTRMKGVQSKYMIYNYCTDKRRFPRGVPAECT 282
>XTH24_ARATH (P24806) Xyloglucan endotransglucosylase/hydrolase protein 24| precursor (EC 2.4.1.207) (At-XTH24) (XTH-24) (Meristem protein 5) (MERI-5 protein) (MERI5 protein) (Endo-xyloglucan transferase) (Xyloglucan endo-1,4-beta-D-glucanase) Length = 269 Score = 49.7 bits (117), Expect = 3e-06 Identities = 18/42 (42%), Positives = 26/42 (61%) Frame = -3 Query: 389 WMSTELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECS 264 W + E+D+ + + W + YM Y+YCTD RFP G P EC+ Sbjct: 225 WYTQEMDSTSQARLKWVQKNYMIYNYCTDHRRFPQGAPKECT 266
>XTH21_ARATH (Q9ZV40) Probable xyloglucan endotransglucosylase/hydrolase protein| 21 precursor (EC 2.4.1.207) (At-XTH21) (XTH-21) Length = 305 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Frame = -3 Query: 416 SACPAGSDAWMSTE-LDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECSRRN 255 S+ + + W S +D+ + + W + K+M Y+YC D RF NG P EC+ +N Sbjct: 246 SSSSSSTSEWFSQRGMDSSSKKVLRWVQRKFMVYNYCKDKKRFSNGLPVECTAKN 300
>BRU1_SOYBN (P35694) Brassinosteroid-regulated protein BRU1 precursor| Length = 283 Score = 46.6 bits (109), Expect = 2e-05 Identities = 19/41 (46%), Positives = 26/41 (63%) Frame = -3 Query: 383 STELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECSR 261 + ELDA + + W + +M Y+YC+D RFP G PAEC R Sbjct: 243 ANELDAYSRRRLRWVQKYFMIYNYCSDLKRFPQGLPAECKR 283
>XTH16_ARATH (Q8LG58) Probable xyloglucan endotransglucosylase/hydrolase protein| 16 precursor (EC 2.4.1.207) (At-XTH16) (XTH-16) Length = 291 Score = 45.8 bits (107), Expect = 4e-05 Identities = 18/45 (40%), Positives = 28/45 (62%) Frame = -3 Query: 395 DAWMSTELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECSR 261 ++ ++ EL+A + W + +M YDYC+D RFP GFP EC + Sbjct: 244 ESQVANELNAYGRRRLRWVQKYFMIYDYCSDLKRFPQGFPPECRK 288
>XTH15_ARATH (Q38911) Probable xyloglucan endotransglucosylase/hydrolase protein| 15 precursor (EC 2.4.1.207) (At-XTH15) (XTH-15) Length = 289 Score = 45.8 bits (107), Expect = 4e-05 Identities = 18/42 (42%), Positives = 27/42 (64%) Frame = -3 Query: 386 MSTELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECSR 261 ++TEL+A + W + +M Y+YC+D RFP GFP EC + Sbjct: 245 VATELNAYGRRRLRWVQKYFMIYNYCSDLKRFPRGFPPECKK 286
>XTH_SOYBN (Q39857) Probable xyloglucan endotransglucosylase/hydrolase| precursor (EC 2.4.1.207) (Fragment) Length = 295 Score = 40.8 bits (94), Expect = 0.001 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = -3 Query: 377 ELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECSR 261 +LDA + W KY Y+YCTD R+P+ P EC R Sbjct: 253 DLDAAQWRRLRWVRQKYTIYNYCTDTKRYPHISPPECKR 291
>XTH_BRAOB (Q6YDN9) Xyloglucan endotransglucosylase/hydrolase precursor (EC| 2.4.1.207) (BobXET16A) Length = 295 Score = 38.9 bits (89), Expect = 0.005 Identities = 18/39 (46%), Positives = 23/39 (58%) Frame = -3 Query: 377 ELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECSR 261 +LDA+ + W K+ Y+YCTD RFP PAEC R Sbjct: 254 DLDAEQYRRLKWVRMKWTIYNYCTDRTRFP-VMPAECRR 291
>XTH4_ARATH (Q39099) Xyloglucan endotransglucosylase/hydrolase protein 4| precursor (EC 2.4.1.207) (At-XTH4) (XTH-4) Length = 296 Score = 38.9 bits (89), Expect = 0.005 Identities = 18/39 (46%), Positives = 23/39 (58%) Frame = -3 Query: 377 ELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECSR 261 +LDA+ + W K+ Y+YCTD RFP PAEC R Sbjct: 255 DLDAEQWRRLKWVRMKWTIYNYCTDRTRFP-VMPAECKR 292
>XTH7_ARATH (Q8LER3) Probable xyloglucan endotransglucosylase/hydrolase protein| 7 precursor (EC 2.4.1.207) (At-XTH7) (XTH-7) Length = 293 Score = 37.7 bits (86), Expect = 0.011 Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 4/53 (7%) Frame = -3 Query: 410 CPAGSDAWMST----ELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECS 264 CPA S W +L + W +M YDYCTD RFP P ECS Sbjct: 239 CPANSKNWWEGSAYHQLSPVEARSYRWVRVNHMVYDYCTDKSRFPVP-PPECS 290
>XTH_TOBAC (P93349) Probable xyloglucan endotransglucosylase/hydrolase protein| precursor (EC 2.4.1.207) Length = 295 Score = 37.4 bits (85), Expect = 0.014 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -3 Query: 377 ELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECSR 261 +LDA + W KY Y+YCTD R+P P EC++ Sbjct: 254 DLDALQYRRLRWVRQKYTIYNYCTDRKRYPT-LPPECTK 291
>XTHA_PHAAN (Q41638) Xyloglucan endotransglucosylase/hydrolase protein A| precursor (EC 2.4.1.207) (VaXTH1) Length = 292 Score = 37.4 bits (85), Expect = 0.014 Identities = 17/39 (43%), Positives = 24/39 (61%) Frame = -3 Query: 377 ELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECSR 261 +LDA +AW +KY Y+YCTD R+ + P EC+R Sbjct: 251 DLDAAQWQKLAWVRNKYTIYNYCTDRKRY-SQVPPECTR 288
>XTH5_ARATH (Q9XIW1) Probable xyloglucan endotransglucosylase/hydrolase protein| 5 precursor (EC 2.4.1.207) (At-XTH5) (XTH-5) Length = 293 Score = 36.6 bits (83), Expect = 0.024 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = -3 Query: 377 ELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECSR 261 +LDA + W +Y Y+YCTD RFP P EC R Sbjct: 252 DLDANQYKRLKWVRKRYTIYNYCTDRVRFPVP-PPECRR 289
>XTHB_PHAAN (Q8LNZ5) Probable xyloglucan endotransglucosylase/hydrolase protein| B precursor (EC 2.4.1.207) (VaXTH2) Length = 293 Score = 35.8 bits (81), Expect = 0.041 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Frame = -3 Query: 401 GSDAWMSTE---LDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECSR 261 G W TE LD+ + W K+ Y+YCTD R+P P EC R Sbjct: 241 GKRWWDQTEFRDLDSFQWRRLKWVRQKFTIYNYCTDRTRYPQ-LPPECRR 289
>XTH1_LYCES (Q40144) Probable xyloglucan endotransglucosylase/hydrolase 1| precursor (EC 2.4.1.207) (LeXTH1) Length = 296 Score = 35.4 bits (80), Expect = 0.054 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -3 Query: 377 ELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECSR 261 +LDA + W KY Y+YCTD R+P P EC++ Sbjct: 255 DLDALQYRRLRWVRQKYTVYNYCTDKARYPVP-PPECTK 292
>XTH6_ARATH (Q8LF99) Probable xyloglucan endotransglucosylase/hydrolase protein| 6 precursor (EC 2.4.1.207) (At-XTH6) (XTH-6) Length = 292 Score = 34.3 bits (77), Expect = 0.12 Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 4/52 (7%) Frame = -3 Query: 410 CPAGSDAWMS----TELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAEC 267 CP+ W L+A W +M YDYCTD RFP P EC Sbjct: 240 CPSNPHNWWEGYAYQSLNAVEARRYRWVRVNHMVYDYCTDRSRFPVP-PPEC 290
>XTH10_ARATH (Q9ZVK1) Probable xyloglucan endotransglucosylase/hydrolase protein| 10 precursor (EC 2.4.1.207) (At-XTH10) (XTH-10) Length = 299 Score = 34.3 bits (77), Expect = 0.12 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -3 Query: 344 WAESKYMSYDYCTDGWRFPNGFPAECS 264 W ++ YDYC D RF N P ECS Sbjct: 269 WVRKYHLIYDYCQDYGRFNNKLPKECS 295
>XTH26_ARATH (Q9SVV2) Putative xyloglucan endotransglucosylase/hydrolase protein| 26 precursor (EC 2.4.1.207) (At-XTH26) (XTH-26) Length = 292 Score = 33.5 bits (75), Expect = 0.20 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = -3 Query: 398 SDAWMS---TELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECSRR 258 S+ W S ++L A L + +M YDYC D RF P ECS++ Sbjct: 241 SNWWTSPSFSQLTASQLTKMQKIRDGFMIYDYCKDTNRFKGVMPPECSKK 290
>XTH8_ARATH (Q8L9A9) Probable xyloglucan endotransglucosylase/hydrolase protein| 8 precursor (EC 2.4.1.207) (At-XTH8) (XTH-8) Length = 292 Score = 33.1 bits (74), Expect = 0.27 Identities = 18/44 (40%), Positives = 20/44 (45%) Frame = -3 Query: 395 DAWMSTELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECS 264 DAW L AW + + YDYC D RFP P ECS Sbjct: 248 DAW---HLSKTQKMDYAWVQRNLVVYDYCKDSERFPT-LPWECS 287
>XTH11_ARATH (Q9SMP1) Probable xyloglucan endotransglucosylase/hydrolase protein| 11 precursor (EC 2.4.1.207) (At-XTH11) (XTH-11) Length = 267 Score = 32.7 bits (73), Expect = 0.35 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = -3 Query: 389 WMSTELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAEC 267 W +L +K A Y+ YDYC+D R+P P EC Sbjct: 224 WNRKQLSSKEKTLYLNARKTYLDYDYCSDRQRYPK-VPQEC 263
>XTH2_ARATH (Q9SV60) Putative xyloglucan endotransglucosylase/hydrolase protein| 2 precursor (EC 2.4.1.207) (At-XTH2) (XTH-2) Length = 292 Score = 32.0 bits (71), Expect = 0.59 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = -3 Query: 380 TELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAEC 267 ++L A + +KYM+YDYC+D R+P P+EC Sbjct: 252 SQLSANEQKVMENVRAKYMTYDYCSDRPRYPVP-PSEC 288
>XTH9_ARATH (Q8LDW9) Xyloglucan endotransglucosylase/hydrolase protein 9| precursor (EC 2.4.1.207) (At-XTH9) (XTH-9) Length = 290 Score = 32.0 bits (71), Expect = 0.59 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 4/54 (7%) Frame = -3 Query: 416 SACPAGSDAWMS----TELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAEC 267 S C W +EL + W + +M YDYC D RFP P EC Sbjct: 232 SKCNGDQKFWWDEPTVSELSLHQNHQLIWVRANHMIYDYCFDATRFP-VTPLEC 284
>XTH_WHEAT (Q41542) Probable xyloglucan endotransglucosylase/hydrolase| precursor (EC 2.4.1.207) Length = 293 Score = 31.2 bits (69), Expect = 1.0 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -3 Query: 377 ELDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECSR 261 +LDA +AW ++ Y+YCTD R+ P EC R Sbjct: 252 DLDAAQYRRLAWVRKEHTIYNYCTDHDRYAAMAP-ECKR 289
>XTH1_ARATH (Q9SV61) Putative xyloglucan endotransglucosylase/hydrolase protein| 1 precursor (EC 2.4.1.207) (At-XTH1) (XTH-1) Length = 295 Score = 30.4 bits (67), Expect = 1.7 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = -3 Query: 332 KYMSYDYCTDGWRFPNGFPAECSRRN 255 KYM+YDYC+D RF + P+EC N Sbjct: 271 KYMNYDYCSDKVRF-HVPPSECKWNN 295
>XTH33_ARATH (Q8LC45) Probable xyloglucan endotransglucosylase/hydrolase protein| 33 precursor (EC 2.4.1.207) (At-XTH33) (XTH-33) Length = 310 Score = 30.4 bits (67), Expect = 1.7 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -3 Query: 374 LDAKALGTVAWAESKYMSYDYCTDGWRFPNGFPAECS 264 L + + WA K M Y YC+D R+ PAEC+ Sbjct: 275 LSKNQINAMDWARRKLMFYSYCSDKPRY-KVMPAECN 310
>XTH3_ARATH (Q9LJR7) Probable xyloglucan endotransglucosylase/hydrolase protein| 3 precursor (EC 2.4.1.207) (At-XTH3) (XTH-3) Length = 290 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = -3 Query: 335 SKYMSYDYCTDGWRFPNGFPAEC 267 SKYM+YDYCTD ++ P EC Sbjct: 268 SKYMNYDYCTDRSKYQTP-PREC 289
>RL21_STAAU (Q93EP0) 50S ribosomal protein L21| Length = 102 Score = 29.6 bits (65), Expect = 2.9 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +1 Query: 193 GQTRTPTTRREGRKKKVMMDQLRREHSAGKPLGKRQP 303 G T T T ++GR KK+ + +R ++ + G RQP Sbjct: 55 GATVTATVNKQGRGKKITVFTYKRRKNSXRKKGHRQP 91
>REXO4_XENLA (Q91560) RNA exonuclease 4 (EC 3.1.-.-) (Exonuclease XPMC2)| (Prevents mitotic catastrophe 2 protein) Length = 421 Score = 29.3 bits (64), Expect = 3.8 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 Query: 223 EGRKKKVMMDQLRREHSAGKPLGKRQP 303 +G+K+K+M + EH KP G+ QP Sbjct: 149 KGKKRKIMAEATDTEHQGKKPQGEAQP 175
>RL21_STAAW (Q7A0Q2) 50S ribosomal protein L21| Length = 102 Score = 29.3 bits (64), Expect = 3.8 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +1 Query: 193 GQTRTPTTRREGRKKKVMMDQLRREHSAGKPLGKRQP 303 G T T T ++GR KK+ + +R ++ + G RQP Sbjct: 55 GATVTATVNKQGRGKKITVFTYKRRKNSKRKKGHRQP 91
>RL21_STAAS (Q6G8S2) 50S ribosomal protein L21| Length = 102 Score = 29.3 bits (64), Expect = 3.8 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +1 Query: 193 GQTRTPTTRREGRKKKVMMDQLRREHSAGKPLGKRQP 303 G T T T ++GR KK+ + +R ++ + G RQP Sbjct: 55 GATVTATVNKQGRGKKITVFTYKRRKNSKRKKGHRQP 91
>RL21_STAAR (Q6GG57) 50S ribosomal protein L21| Length = 102 Score = 29.3 bits (64), Expect = 3.8 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +1 Query: 193 GQTRTPTTRREGRKKKVMMDQLRREHSAGKPLGKRQP 303 G T T T ++GR KK+ + +R ++ + G RQP Sbjct: 55 GATVTATVNKQGRGKKITVFTYKRRKNSKRKKGHRQP 91
>RL21_STAAN (Q7A583) 50S ribosomal protein L21| Length = 102 Score = 29.3 bits (64), Expect = 3.8 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +1 Query: 193 GQTRTPTTRREGRKKKVMMDQLRREHSAGKPLGKRQP 303 G T T T ++GR KK+ + +R ++ + G RQP Sbjct: 55 GATVTATVNKQGRGKKITVFTYKRRKNSKRKKGHRQP 91
>RL21_STAAM (Q99TK6) 50S ribosomal protein L21| Length = 102 Score = 29.3 bits (64), Expect = 3.8 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +1 Query: 193 GQTRTPTTRREGRKKKVMMDQLRREHSAGKPLGKRQP 303 G T T T ++GR KK+ + +R ++ + G RQP Sbjct: 55 GATVTATVNKQGRGKKITVFTYKRRKNSKRKKGHRQP 91
>RL21_STAAC (Q5HFB6) 50S ribosomal protein L21| Length = 102 Score = 29.3 bits (64), Expect = 3.8 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +1 Query: 193 GQTRTPTTRREGRKKKVMMDQLRREHSAGKPLGKRQP 303 G T T T ++GR KK+ + +R ++ + G RQP Sbjct: 55 GATVTATVNKQGRGKKITVFTYKRRKNSKRKKGHRQP 91
>Y443_CHLPN (Q9Z8A0) Hypothetical protein CPn_0443/CP0310/CPj0443/CpB0459| Length = 417 Score = 28.9 bits (63), Expect = 5.0 Identities = 13/21 (61%), Positives = 17/21 (80%), Gaps = 1/21 (4%) Frame = -2 Query: 393 RLDEHGA-RRQSPRHRRLGRE 334 R++EH A +RQ RHRR+GRE Sbjct: 217 RMEEHEASQRQDARHRRIGRE 237
>RL21_STAHJ (Q4L6Z3) 50S ribosomal protein L21| Length = 102 Score = 28.9 bits (63), Expect = 5.0 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +1 Query: 193 GQTRTPTTRREGRKKKVMMDQLRREHSAGKPLGKRQP 303 G T T T ++GR KK+ + +R + + G RQP Sbjct: 55 GATVTATVNKQGRGKKITVFTYKRRKDSKRKKGHRQP 91
>LAMB2_MOUSE (Q61292) Laminin beta-2 chain precursor (S-laminin) (S-LAM)| Length = 1799 Score = 28.1 bits (61), Expect = 8.6 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = -2 Query: 219 PRRWCSCLSIRLERDGHTLAHFPCKYILP 133 P +W L + ++R G AH PC ++LP Sbjct: 635 PEQWAE-LELMVQRPGPVSAHSPCGHVLP 662
>RBN_COLP3 (Q489A5) tRNA-processing ribonuclease BN (EC 3.1.-.-) (RNase BN)| Length = 303 Score = 28.1 bits (61), Expect = 8.6 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Frame = -3 Query: 296 RFPNGFPAECSRRN*SIITFFFLPSLLVVGVLVCPFD--WSETDTRWLISHVSTFY 135 ++ GF A S+ + I+F FL +LL++ + F+ W TD R I+ + ++ Sbjct: 93 QYLTGFVANASKMSAVAISFLFLAALLLISSIDNTFNKIWRVTDKRRTITSFAMYW 148
>SPN1_MOUSE (Q80W37) Snurportin-1 (RNA U transporter 1)| Length = 358 Score = 28.1 bits (61), Expect = 8.6 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +3 Query: 174 RLAPIEWTNKNTNDEEGRKEEESDD 248 RLA +WT + +EE +K+EE D Sbjct: 64 RLAEDDWTGMESGEEENKKDEEEMD 88 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,239,135 Number of Sequences: 219361 Number of extensions: 853383 Number of successful extensions: 2628 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 2550 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2625 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
