>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence
          Length = 153766

 Score =  246 bits (124), Expect = 8e-62
 Identities = 248/289 (85%), Gaps = 4/289 (1%)
 Strand = Plus / Plus

                                                                         
Query: 384   tctctatatcaatataaccggacttgcattcagttccagcgtcgtttgatatatagccgg 443
             |||||||||| ||| |||||||||||||||||  ||||||| ||| ||||||||||||  
Sbjct: 95006 tctctatatctataaaaccggacttgcattcaaatccagcggcgtctgatatatagccat 95065

                                                                         
Query: 444   cggaaacaccgcagcactctgagacagtgctatcagatttggcgcggcagtcaaaatagg 503
             | |||  |||||||||||||||||| ||||||||||||||  ||||||| | ||| ||||
Sbjct: 95066 cagaagaaccgcagcactctgagacggtgctatcagatttctcgcggcacttaaagtagg 95125

                                                                         
Query: 504   tagggaccgagtctagatgacaacagcaatgggaggcttgcgcttgctgggttcgctcca 563
             ||||||| ||||||||||| ||||| || ||||| |||||  ||||||||||| |||  |
Sbjct: 95126 tagggacggagtctagatggcaacaacagtgggatgcttgtacttgctgggtttgctgga 95185

                                                                         
Query: 564   tggccacaagacccagaactaggagtatcatggccaaggtcttgacattgttgcctctca 623
               ||||||||||||| ||||| ||| ||||  ||||||||||||||||||||||||||||
Sbjct: 95186 gtgccacaagacccacaactacgagcatcaacgccaaggtcttgacattgttgcctctca 95245

                                                              
Query: 624   tagccatgttcaattcttt----cacacacggtgatagaaatgaatgac 668
             | |||||||||| ||||||    ||||||||||||| ||||||||||||
Sbjct: 95246 tggccatgttcagttctttcacacacacacggtgattgaaatgaatgac 95294



 Score =  194 bits (98), Expect = 3e-46
 Identities = 140/154 (90%)
 Strand = Plus / Plus

                                                                         
Query: 159   ttattgaaggcaacacaaacactccttggcgggcttgtccgatgcagctccttgccataa 218
             ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||
Sbjct: 94160 ttattgaaggcaacacaaacactccttggcgggcttgtcagatgcagctcgttggcataa 94219

                                                                         
Query: 219   ctagttaagccacgacgacttgtgcaatttccacaccgttcttggtgcacagatcgtggc 278
             ||||||||||   ||||||||| ||||||||  ||  |||||||||||||||||||||||
Sbjct: 94220 ctagttaagctgtgacgacttgcgcaatttcggcattgttcttggtgcacagatcgtggc 94279

                                               
Query: 279   attcactggtgcagcgttccatggcatcgttccc 312
             || |||| |||||||||||||||||||| |||||
Sbjct: 94280 atccactagtgcagcgttccatggcatctttccc 94313



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                        
Query: 311   ccagatggagttactttgttacacaaggaagccgtgcaccccaacttgcagtagttgac 369
             |||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||
Sbjct: 94545 ccagatggagttactttgttgcacaaggaagccttgcaccccagcttgcagtagttgac 94603



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 76/87 (87%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                         
Query: 103   taaaattgcaacacaagtaacatttgacat-atactggtcttggatgcgacatccagtta 161
             |||||||| |||||||||||||||||||||  ||||| | ||||||| |||| ||| |||
Sbjct: 89611 taaaattgtaacacaagtaacatttgacatcctactgatattggatgtgacacccaatta 89670

                                        
Query: 162   ttgaaggcaacacaaacactccttggc 188
             |||||| ||||| || |||||||||||
Sbjct: 89671 ttgaagacaacataatcactccttggc 89697



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                        
Query: 311   ccagatggagttactttgttacacaaggaagccgtgcaccccaacttgcagtagttgac 369
             ||||||| ||||| | |||| |||| ||||||||||||||||| |||||||||||||||
Sbjct: 90272 ccagatgaagttaatgtgttgcacacggaagccgtgcaccccagcttgcagtagttgac 90330

>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome
              condensation factor (CCF), putative resistance protein
              (RGA-2), putative resistance protein (RGA2) and putative
              nodulin-like-like protein (NLL) gene, complete cds; and
              retrotransposons Josephine, Angela-2, Angela-4, Heidi,
              Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5,
              Barbara, Isabelle, Erika-2, and Claudia
          Length = 211009

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                          
Query: 112    aacacaagtaacatttgacatatactggtcttggatgcgacatccagttattgaaggcaa 171
              ||||||||||||||||||||| ||||| | |||| || |||||||| |||||||||||||
Sbjct: 181652 aacacaagtaacatttgacatctactgatattgggtgtgacatccaattattgaaggcaa 181711

                               
Query: 172    cacaaacactccttggc 188
              || ||||||||||||||
Sbjct: 181712 cataaacactccttggc 181728



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 524    caacagcaatgggaggcttgcgcttgctgggtt 556
              ||||| |||||||| ||||| ||||||||||||
Sbjct: 179367 caacaacaatgggaagcttgtgcttgctgggtt 179399



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                   
Query: 142    ttggatgcgacatccagttattgaaggcaacacaaacactccttggcgggctt 194
              ||||||| || ||||| | | ||||||||||| || ||||||||||| |||||
Sbjct: 179148 ttggatgtgaaatccaatcactgaaggcaacataagcactccttggctggctt 179200

>gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosome 8, complete sequence
          Length = 223991

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 519    gatgacaacagcaatgggagg 539
              |||||||||||||||||||||
Sbjct: 198804 gatgacaacagcaatgggagg 198784

>emb|BX908747.25| Zebrafish DNA sequence from clone DKEY-58J15 in linkage group 1,
            complete sequence
          Length = 232503

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 326  ttgttacacaaggaagccgtg 346
            |||||||||||||||||||||
Sbjct: 9575 ttgttacacaaggaagccgtg 9555

>gb|AC147558.3| Mus musculus BAC clone RP23-470N2 from 8, complete sequence
          Length = 212626

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 519    gatgacaacagcaatgggagg 539
              |||||||||||||||||||||
Sbjct: 164869 gatgacaacagcaatgggagg 164889

>ref|XM_631184.1| Dictyostelium discoideum hypothetical protein (DDB0219427), partial
           mRNA
          Length = 1002

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 95  attggagctaaaattgcaac 114
           ||||||||||||||||||||
Sbjct: 977 attggagctaaaattgcaac 958

>gb|AC120364.7| Mus musculus chromosome 8, clone RP24-291F20, complete sequence
          Length = 193257

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 630    tgttcaattctttcacacac 649
              ||||||||||||||||||||
Sbjct: 142844 tgttcaattctttcacacac 142825

>gb|AC158385.4| Mus musculus chromosome 8, clone RP24-247P24, complete sequence
          Length = 148656

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 630    tgttcaattctttcacacac 649
              ||||||||||||||||||||
Sbjct: 129010 tgttcaattctttcacacac 129029

>gb|AY326313.1| Paenibacillus sp. Dex70-34 RNA binding protein-like protein gene,
            partial cds; dextranase 1 (dex1) gene, complete cds; and
            methyl-accepting chemotaxis protein histidine kinase
            gene, partial cds
          Length = 4615

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 294  gttccatggcatcgttccca 313
            ||||||||||||||||||||
Sbjct: 4344 gttccatggcatcgttccca 4363

>gb|AC108797.8| Mus musculus chromosome 3, clone RP23-349M18, complete sequence
          Length = 208211

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   gacttgcattcagttccagc 423
             ||||||||||||||||||||
Sbjct: 99147 gacttgcattcagttccagc 99166

>emb|AL356552.8| Human DNA sequence from clone RP4-732F8 on chromosome 1p34.3-36.11
            Contains GSSs, complete sequence
          Length = 25633

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 89   agccttattggagctaaaat 108
            ||||||||||||||||||||
Sbjct: 2139 agccttattggagctaaaat 2158

>emb|AL022343.6|HS608E8 Human DNA sequence from clone RP4-608E8 on chromosome 6p22.1-22.3
             Contains the 5' end of the DTNBP1 gene for dystobrevin
             binding protein 1 and a CpG island, complete sequence
          Length = 92143

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 625   agccatgttcaattctttca 644
             ||||||||||||||||||||
Sbjct: 79624 agccatgttcaattctttca 79605

>emb|AL831748.7| Zebrafish DNA sequence from clone DKEY-70P6 in linkage group 17
             Contains two novel genes, a novel gene similar to human
             and mouse URKL1 (uridine kinase-like 1), a novel gene
             similar to vertebrate SYP (synaptophysin), a novel gene
             similar to vertebrate CACNA1 (voltage-dependent calcium
             channel P/Q type alpha 1 subunit), a novel pseudogene
             similar to human and mouse EMILIN2 (elastin microfibril
             interfacer 2) and a CpG island, complete sequence
          Length = 202357

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 589   tatcatggccaaggtcttga 608
             ||||||||||||||||||||
Sbjct: 91174 tatcatggccaaggtcttga 91155

>emb|BX649575.18| Zebrafish DNA sequence from clone CH211-215H12 in linkage group 8,
              complete sequence
          Length = 171493

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 589    tatcatggccaaggtcttga 608
              ||||||||||||||||||||
Sbjct: 141611 tatcatggccaaggtcttga 141592

>gb|AC108685.4| Homo sapiens X BAC RP11-323F16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 178333

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     gccttattggagctaaaatt 109
              ||||||||||||||||||||
Sbjct: 102244 gccttattggagctaaaatt 102263

>gb|AC144807.23| Medicago truncatula clone mth2-9j13, complete sequence
          Length = 115904

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    acaacaaaaacatctaatat 40
             ||||||||||||||||||||
Sbjct: 58947 acaacaaaaacatctaatat 58928

>gb|AC106882.5| Homo sapiens BAC clone RP11-768B22 from 4, complete sequence
          Length = 176692

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 376   tgaaactttctctatatcaa 395
             ||||||||||||||||||||
Sbjct: 31283 tgaaactttctctatatcaa 31302

>gb|AC106713.3| Homo sapiens X BAC RP11-770A12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 125790

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    gccttattggagctaaaatt 109
             ||||||||||||||||||||
Sbjct: 78077 gccttattggagctaaaatt 78058

>ref|XM_682982.1| PREDICTED: Danio rerio similar to elastin microfibril interfacer 3
           (LOC559624), mRNA
          Length = 2976

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 589 tatcatggccaaggtcttga 608
           ||||||||||||||||||||
Sbjct: 955 tatcatggccaaggtcttga 936

>ref|XM_694010.1| PREDICTED: Danio rerio similar to elastin microfibril interfacer 3
            (LOC570521), mRNA
          Length = 3321

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 589  tatcatggccaaggtcttga 608
            ||||||||||||||||||||
Sbjct: 1237 tatcatggccaaggtcttga 1218

>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    tccttggcgggcttgtccga 200
              ||||||||||||||||||||
Sbjct: 107672 tccttggcgggcttgtccga 107653

>emb|BX908763.19| Zebrafish DNA sequence from clone DKEY-119O24 in linkage group 18,
              complete sequence
          Length = 170230

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 646    acacggtgatagaaatgaat 665
              ||||||||||||||||||||
Sbjct: 151056 acacggtgatagaaatgaat 151075


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,936,855
Number of Sequences: 3902068
Number of extensions: 4936855
Number of successful extensions: 81053
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80995
Number of HSP's gapped (non-prelim): 56
length of query: 669
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 646
effective length of database: 17,143,297,704
effective search space: 11074570316784
effective search space used: 11074570316784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)