Clone Name	rbags6j16
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,...	985	0.0
2	dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ...	985	0.0
3	dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome	880	0.0
4	ref|XM_481018.1| Oryza sativa (japonica cultivar-group), mRNA	769	0.0
5	ref|XM_481019.1| Oryza sativa (japonica cultivar-group), mRNA	769	0.0
6	ref|XM_507181.1| PREDICTED Oryza sativa (japonica cultivar-group...	769	0.0
7	gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N...	769	0.0
8	gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA...	769	0.0
9	gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1...	769	0.0
10	gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome...	769	0.0
11	gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome...	769	0.0
12	emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor...	769	0.0
13	emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,...	769	0.0
14	gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome...	769	0.0
15	gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, c...	769	0.0
16	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	769	0.0
17	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	769	0.0
18	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	769	0.0
19	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	769	0.0
20	dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic D...	769	0.0
21	dbj|AK105308.1| Oryza sativa (japonica cultivar-group) cDNA clon...	769	0.0
22	dbj|AK071967.1| Oryza sativa (japonica cultivar-group) cDNA clon...	769	0.0
23	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	769	0.0
24	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	761	0.0
25	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	761	0.0
26	dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic D...	761	0.0
27	dbj|AK063122.1| Oryza sativa (japonica cultivar-group) cDNA clon...	761	0.0
28	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	761	0.0
29	emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb...	761	0.0
30	dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome	761	0.0
31	ref|XM_479424.1| Oryza sativa (japonica cultivar-group), mRNA	753	0.0
32	ref|XM_479423.1| Oryza sativa (japonica cultivar-group), mRNA	753	0.0
33	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	753	0.0
34	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	753	0.0
35	dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic D...	753	0.0
36	dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic D...	753	0.0
37	dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic D...	753	0.0
38	dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic D...	753	0.0
39	ref|XM_450630.1| Oryza sativa (japonica cultivar-group), mRNA	729	0.0
40	ref|XM_450631.1| Oryza sativa (japonica cultivar-group), mRNA	729	0.0
41	ref|XM_506652.1| PREDICTED Oryza sativa (japonica cultivar-group...	729	0.0
42	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	729	0.0
43	dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic D...	729	0.0
44	dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic D...	729	0.0
45	gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome...	722	0.0
46	gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome...	722	0.0
47	emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome	722	0.0
48	emb|X06734.1|CHZMRP14 Maize chloroplast genes for ribosomal prot...	722	0.0
49	gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome	722	0.0
50	ref|NM_190859.1| Oryza sativa (japonica cultivar-group), predic...	605	e-170
51	gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genom...	539	e-150
52	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	539	e-150
53	emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0...	539	e-150
54	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	539	e-150
55	gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 geno...	462	e-127
56	gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 geno...	462	e-127
57	gb|DQ069425.1| Typha latifolia ribosomal protein L14 (rpl14) gen...	389	e-105
58	gb|DQ069426.1| Yucca schidigera ribosomal protein L14 (rpl14) ge...	379	e-102
59	gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome...	351	2e-93
60	gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome...	351	2e-93
61	emb|AL731738.6|CNS08C7N Oryza sativa chromosome 12, . BAC OSJNBa...	349	8e-93
62	emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complet...	337	3e-89
63	gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, ...	317	3e-83
64	gb|M15176.1|MZECPPG Zea mays chloroplast Eco x DNA	307	3e-80
65	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	305	1e-79
66	dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic D...	305	1e-79
67	emb|AJ879453.1| Acorus calamus chloroplast, complete genome	305	1e-79
68	gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, ...	295	1e-76
69	gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast...	287	2e-74
70	gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, c...	287	2e-74
71	gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome	287	2e-74
72	gb|DQ069421.1| Acorus americanus ribosomal protein L14 (rpl14) g...	285	1e-73
73	gb|DQ069423.1| Nuphar advena ribosomal protein L14 (rpl14) gene,...	280	6e-72
74	emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome	280	6e-72
75	gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloropla...	280	6e-72
76	gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, comple...	278	2e-71
77	gb|AY582139.1| Panax ginseng chloroplast, complete genome	278	2e-71
78	gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, comp...	276	9e-71
79	emb|AJ627251.1| Nymphaea alba chloroplast, complete genome	276	9e-71
80	dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome	276	9e-71
81	emb|AJ970307.1| Cucumis sativus chloroplast complete genome	274	4e-70
82	gb|AF441853.1|AF441853 Cucumis sativus RBL1 mRNA, complete cds; ...	274	4e-70
83	gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid...	274	4e-70
84	dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl...	272	1e-69
85	emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA	264	4e-67
86	emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ...	264	4e-67
87	dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s...	264	4e-67
88	gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloropl...	262	1e-66
89	emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast ...	262	1e-66
90	dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic D...	262	1e-66
91	dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic D...	262	1e-66
92	dbj|AP004556.3| Oryza sativa (japonica cultivar-group) genomic D...	242	1e-60
93	dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic D...	242	1e-60
94	emb|X13336.1|CHSORP Spinacia oleracea plastid genes rps3, rps19,...	240	5e-60
95	dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, co...	236	8e-59
96	emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomi...	228	2e-56
97	gb|DQ069424.1| Ranunculus macranthus ribosomal protein L14 (rpl1...	226	8e-56
98	emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloropl...	222	1e-54
99	gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, ...	206	7e-50
100	gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence	202	1e-48
101	dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome	202	1e-48
102	dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete ge...	196	7e-47
103	dbj|AB077365.1| Iris dichotoma plastid DNA, intron region	180	4e-42
104	gb|AC135498.3| Oryza sativa (japonica cultivar-group) chromosome...	176	6e-41
105	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	176	6e-41
106	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	176	6e-41
107	gb|DQ069420.1| Yucca schidigera ribosomal protein L16 (rpl16) ge...	172	1e-39
108	dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic D...	172	1e-39
109	dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic D...	172	1e-39
110	dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic D...	172	1e-39
111	dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic D...	172	1e-39
112	gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-1...	170	4e-39
113	gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA...	170	4e-39
114	gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar N...	170	4e-39
115	dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochond...	170	4e-39
116	gb|DQ069419.1| Typha latifolia ribosomal protein L16 (rpl16) gen...	159	2e-35
117	gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nb...	155	2e-34
118	dbj|D13105.1|RICMT09 Oryza sativa (japonica cultivar-group) mito...	155	2e-34
119	gb|DQ069415.1| Acorus americanus ribosomal protein L16 (rpl16) g...	149	1e-32
120	gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genom...	149	1e-32
121	dbj|AB077366.1| Iris bungei plastid DNA, intron region	149	1e-32
122	dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic D...	145	2e-31
123	dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic D...	141	4e-30
124	dbj|AB096925.1| Papaver somniferum chloroplast rpl16 gene for ri...	141	4e-30
125	dbj|AB096924.1| Papaver setigerum chloroplast rpl16 gene for rib...	141	4e-30
126	dbj|AB096923.1| Papaver rhoeas chloroplast rpl16 gene for riboso...	133	9e-28
127	dbj|AB096922.1| Papaver pseudo-orientale chloroplast rpl16 gene ...	133	9e-28
128	dbj|AB096921.1| Papaver orientale chloroplast rpl16 gene for rib...	133	9e-28
129	gb|AC093544.8| Medicago truncatula chloroplast, complete genome,...	131	3e-27
130	gb|AF536225.1| Vigna angularis chloroplast S10B operon, partial ...	129	1e-26
131	dbj|AB077335.1| Allium altaicum plastid DNA, intron region	129	1e-26
132	gb|DQ069417.1| Nuphar advena ribosomal protein L16 (rpl16) gene,...	125	2e-25
133	dbj|AB096920.1| Papaver bracteatum chloroplast rpl16 gene for ri...	125	2e-25
134	dbj|AB199893.1| Angelica acutiloba var. iwatensis chloroplast rp...	121	3e-24
135	dbj|AB199892.1| Angelica acutiloba var. sugiyamae chloroplast rp...	121	3e-24
136	dbj|AB199891.1| Angelica acutiloba chloroplast rpl16 gene for ri...	121	3e-24
137	emb|X03834.1|CHSOL16 Spirodela oligorhiza chloroplast gene for r...	121	3e-24
138	gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, compl...	117	5e-23
139	gb|AC133862.6| Medicago truncatula clone mth2-30d7, complete seq...	115	2e-22
140	gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete s...	115	2e-22
141	dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complet...	111	3e-21
142	emb|X68048.1|CHPVHISG Phaseolus vulgaris chloroplast DNA for tRN...	109	1e-20
143	dbj|AB077337.1| Saussurea involucrata plastid DNA, intron region	109	1e-20
144	gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome	103	8e-19
145	gb|DQ069418.1| Ranunculus macranthus ribosomal protein L16 (rpl1...	98	5e-17
146	dbj|AB201297.1| Prunus campanulata chloroplast rpl16 gene for ri...	98	5e-17
147	dbj|AB201296.1| Prunus pseudocerasus chloroplast rpl16 gene for ...	98	5e-17
148	dbj|AB201295.1| Prunus maximowiczii chloroplast rpl16 gene for r...	98	5e-17
149	dbj|AB201294.1| Prunus subhirtella var. ascendens chloroplast rp...	98	5e-17
150	dbj|AB201293.1| Prunus apetala chloroplast rpl16 gene for riboso...	98	5e-17
151	dbj|AB201292.1| Prunus apetala chloroplast rpl16 gene for riboso...	98	5e-17
152	dbj|AB112068.1| Scutellaria baicalensis chloroplast rpl16 gene f...	98	5e-17
153	dbj|AB077333.1| Ferula feruloides plastid DNA, intron region	92	3e-15
154	dbj|AB112072.1| Scutellaria lateriflora chloroplast rpl16 gene f...	90	1e-14
155	dbj|AB112071.1| Scutellaria indica chloroplast rpl16 gene for ro...	90	1e-14
156	dbj|AB112069.1| Scutellaria galericulata chloroplast rpl16 gene ...	90	1e-14
157	dbj|AB112067.1| Scutellaria altissima chloroplast rpl16 gene for...	90	1e-14
158	gb|DQ069416.1| Ginkgo biloba ribosomal protein L16 (rpl16) gene,...	88	5e-14
159	dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic D...	88	5e-14
160	gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 1...	88	5e-14
161	dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic D...	88	5e-14
162	dbj|AB116628.1| Cistanche deserticola chloroplast rpl16 gene for...	88	5e-14
163	dbj|AB116625.1| Cistanche deserticola chloroplast rpl16 gene for...	88	5e-14
164	dbj|AB116624.1| Cistanche deserticola chloroplast rpl16 gene for...	88	5e-14
165	dbj|AB062414.1| Cistanche salsa chloroplast rpl16 gene for ribos...	88	5e-14
166	dbj|AB062413.1| Cistanche salsa chloroplast rpl16 gene for ribos...	88	5e-14
167	dbj|AB062412.1| Cistanche salsa chloroplast rpl16 gene for ribos...	88	5e-14
168	dbj|AB062411.1| Cistanche deserticola chloroplast rpl16 gene for...	88	5e-14
169	emb|AL663020.4|OSJN00220 Oryza sativa genomic DNA, chromosome 4,...	86	2e-13
170	dbj|AB077439.1| Sophora alopecuroides plastid DNA, intron region	86	2e-13
171	gb|M60180.1|OBECPRPB O.ammophila ribosomal protein L14 and S8 (r...	86	2e-13
172	dbj|AB062415.1| Cistanche tubulosa chloroplast rpl16 gene for ri...	86	2e-13
173	dbj|AB116627.1| Cistanche sinensis chloroplast rpl16 gene for ri...	84	7e-13
174	dbj|AB116626.1| Cistanche sinensis chloroplast rpl16 gene for ri...	84	7e-13
175	dbj|AB087470.1| Anthoceros formosae chloroplast rpl16 mRNA for r...	84	7e-13
176	dbj|AB112070.1| Scutellaria incana chloroplast rpl16 gene for ri...	82	3e-12
177	dbj|AB087469.1| Anthoceros formosae chloroplast rpl14 mRNA for r...	82	3e-12
178	dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete ge...	82	3e-12
179	gb|M80799.1|VIRCPRPL Vigna unguiculata chloroplast ribosomal pro...	82	3e-12
180	gb|M60179.1|OBECPRPA O.ammophila ribosomal protein L14 and L16 (...	82	3e-12
181	dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast ...	80	1e-11
182	gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome	78	4e-11
183	emb|AL662985.3|OSJN00189 Oryza sativa genomic DNA, chromosome 4,...	78	4e-11
184	emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA	76	2e-10
185	dbj|AP004038.2| Oryza sativa (japonica cultivar-group) genomic D...	76	2e-10
186	dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome	74	7e-10
187	dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic D...	70	1e-08
188	dbj|AB077440.1| Incarvillea potaninii plastid DNA, intron region	68	4e-08
189	dbj|AB077334.1| Zygophyllum pterocarpum plastid DNA, intron region	68	4e-08
190	gb|AY660566.1| Huperzia lucidula chloroplast, complete genome	66	2e-07
191	gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast,...	62	3e-06
192	dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic D...	62	3e-06
193	gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete g...	58	4e-05
194	gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete g...	56	2e-04
195	gb|DQ069422.1| Ginkgo biloba ribosomal protein L14 (rpl14) gene,...	56	2e-04
196	tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloropl...	56	2e-04
197	emb|X14062.1|CHCRL14 Chlamydomonas reinhardtii plasti gene for r...	56	2e-04
198	dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete g...	54	6e-04
199	gb|AY224188.1| Medicago truncatula adenosylhomocysteinase (AHC1)...	54	6e-04
200	gb|M30487.1|CPACYRP Cyanophora paradoxa ribosomal protein l22 (r...	54	6e-04
201	emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa...	54	6e-04
202	gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome	54	6e-04
203	gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome	52	0.003
204	gb|AF050665.1|AF050665 Spirogyra maxima tRNA-Ile gene, complete ...	52	0.003
205	gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple...	50	0.010
206	gb|AC144759.11| Medicago truncatula clone mth2-15b21, complete s...	50	0.010
207	gb|AC123596.13| Medicago truncatula clone mth1-17n5, complete se...	50	0.010
208	dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome	50	0.010
209	emb|CT025839.2| Medicago truncatula chromosome 5 clone mth4-19c2...	50	0.010
210	gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome	48	0.040
211	gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome...	48	0.040
212	ref|NM_128441.3| Arabidopsis thaliana structural constituent of ...	46	0.16
213	emb|AL359081.10| Human DNA sequence from clone RP11-541F9 on chr...	46	0.16
214	gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map...	46	0.16
215	gb|AY219111.2| Arabidopsis thaliana hypothetical protein (At2g28...	46	0.16
216	dbj|AP000606.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...	46	0.16
217	gb|AC157473.1| Medicago truncatula chromosome 7 BAC clone mte1-1...	46	0.16
218	gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete ge...	44	0.62
219	gb|AC132335.3| Mus musculus BAC clone RP24-230C24 from chromosom...	44	0.62
220	dbj|AB025638.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	44	0.62
221	gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosom...	44	0.62
222	gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome	42	2.5
223	emb|CT009479.4| M.truncatula DNA sequence from clone MTH2-164E3 ...	42	2.5
224	emb|CR753838.10| Zebrafish DNA sequence from clone DKEY-189H5 in...	42	2.5
225	gb|AY115835.1| Pinus krempfii ribosomal protein L16 (rpl16) gene...	42	2.5
226	gb|AY115834.1| Pinus squamata ribosomal protein L16 (rpl16) gene...	42	2.5
227	gb|AY115833.1| Pinus gerardiana ribosomal protein L16 (rpl16) ge...	42	2.5
228	gb|AY115832.1| Pinus bungeana ribosomal protein L16 (rpl16) gene...	42	2.5
229	gb|AY115831.1| Pinus balfouriana specimen-voucher Kew1969.10666 ...	42	2.5
230	gb|AY115830.1| Pinus balfouriana specimen-voucher Olinecm11 Cali...	42	2.5
231	gb|AY115829.1| Pinus longaeva specimen-voucher Kew1972.6349 Cali...	42	2.5
232	gb|AY115828.1| Pinus longaeva specimen-voucher DSG3099 Californi...	42	2.5
233	gb|AY115827.1| Pinus aristata specimen-voucher Kew1992.747 Color...	42	2.5
234	gb|AY115826.1| Pinus aristata specimen-voucher DSG3299 Colorado ...	42	2.5
235	gb|AY115825.1| Pinus nelsonii ribosomal protein L16 (rpl16) gene...	42	2.5
236	gb|AY115824.1| Pinus rzedowskii ribosomal protein L16 (rpl16) ge...	42	2.5
237	gb|AY115823.1| Pinus pinceana specimen-voucher DSG8899 Coahuila ...	42	2.5
238	gb|AY115822.1| Pinus pinceana specimen-voucher DSG3998 Hidalgo r...	42	2.5
239	gb|AY115821.1| Pinus maximartinezii ribosomal protein L16 (rpl16...	42	2.5
240	gb|AY115820.1| Pinus quadrifolia ribosomal protein L16 (rpl16) g...	42	2.5
241	gb|AY115819.1| Pinus juarezensis specimen-voucher DSG1099 Baja C...	42	2.5
242	gb|AY115818.1| Pinus juarezensis specimen-voucher DSG1499 Baja C...	42	2.5
243	gb|AY115817.1| Pinus monophylla specimen-voucher DSG2399 Califor...	42	2.5
244	gb|AY115816.1| Pinus monophylla specimen-voucher Kew1986.5767 Ca...	42	2.5
245	gb|AY115815.1| Pinus discolor ribosomal protein L16 (rpl16) gene...	42	2.5
246	gb|AY115814.1| Pinus johannis specimen-voucher DSG2001 San Luis ...	42	2.5
247	gb|AY115813.1| Pinus johannis specimen-voucher DSG8199 Zacatecas...	42	2.5
248	gb|AY115812.1| Pinus catarinae specimen-voucher DSG1301 Nuevo Le...	42	2.5
249	gb|AY115811.1| Pinus catarinae specimen-voucher DSG6899 Chapingo...	42	2.5
250	gb|AY115810.1| Pinus remota specimen-voucher DSG801 Coahuila rib...	42	2.5
251	gb|AY115809.1| Pinus remota specimen-voucher DSG19298 Coahuila r...	42	2.5
252	gb|AY115808.1| Pinus edulis specimen-voucher Kew1995.3959 Colora...	42	2.5
253	gb|AY115807.1| Pinus edulis specimen-voucher DSG3399 Colorado ri...	42	2.5
254	gb|AY115806.1| Pinus culminicola ribosomal protein L16 (rpl16) g...	42	2.5
255	gb|AY115805.1| Pinus cembroides subsp. lagunae ribosomal protein...	42	2.5
256	gb|AY115804.1| Pinus cembroides subsp. orizabensis ribosomal pro...	42	2.5
257	gb|AY115803.1| Pinus cembroides ribosomal protein L16 (rpl16) ge...	42	2.5
258	emb|AL606489.26| Human DNA sequence from clone RP11-739N20 on ch...	42	2.5
259	ref|XM_503361.1| Yarrowia lipolytica CLIB122, YALI0E00154g predi...	42	2.5
260	emb|AL359821.11| Human DNA sequence from clone RP11-175G14 on ch...	42	2.5
261	emb|AL355355.25| Human DNA sequence from clone RP11-730A19 on ch...	42	2.5
262	emb|AL122003.17|HSJ659I19 Human DNA sequence from clone RP4-659I...	42	2.5
263	gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome...	42	2.5
264	gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete g...	42	2.5
265	gb|AC025821.7| Homo sapiens BAC clone RP11-472F4 from 4, complet...	42	2.5
266	dbj|AK034773.1| Mus musculus 12 days embryo embryonic body betwe...	42	2.5
267	gb|AC109358.3| Homo sapiens BAC clone RP11-648D16 from 2, comple...	42	2.5
268	gb|AC073885.5| Homo sapiens BAC clone RP11-70L16 from 2, complet...	42	2.5
269	gb|AF283525.1|AF283519S7 Homo sapiens FIP2 gene, exons 11, 12 an...	42	2.5
270	dbj|AK120872.1| Oryza sativa (japonica cultivar-group) cDNA clon...	42	2.5
271	emb|BX322606.6| Zebrafish DNA sequence from clone DKEY-40F12, co...	42	2.5
272	gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome	42	2.5
273	emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ...	42	2.5
274	gb|AC165159.2| Mus musculus BAC clone RP23-234N1 from chromosome...	42	2.5
275	gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete...	40	9.7
276	ref|XM_639569.1| Dictyostelium discoideum histidine kinase (DDB0...	40	9.7
277	ref|XM_639498.1| Dictyostelium discoideum histidine kinase DhkI ...	40	9.7
278	ref|XM_634860.1| Dictyostelium discoideum hypothetical protein (...	40	9.7
279	gb|AC167973.4| Mus musculus BAC clone RP23-453B4 from chromosome...	40	9.7
280	gb|AC153856.23| Mus musculus 10 BAC RP23-468J15 (Roswell Park Ca...	40	9.7
281	gb|AY681321.1| Agelena orientalis toxin-like structure Agel_24 p...	40	9.7
282	gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome	40	9.7
283	gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence	40	9.7
284	emb|CT025560.9| Mouse DNA sequence from clone RP23-432N22 on chr...	40	9.7
285	emb|CR450788.7| Zebrafish DNA sequence from clone DKEY-15P23 in ...	40	9.7
286	emb|BX005436.12| Zebrafish DNA sequence from clone DKEY-9A8 in l...	40	9.7
287	emb|AL603882.13| Human DNA sequence from clone RP11-630I5 on chr...	40	9.7
288	gb|AC163342.2| Mus musculus BAC clone RP24-115M13 from chromosom...	40	9.7
289	emb|BX572101.1| Prochlorococcus marinus MIT9313 complete genome;...	40	9.7
290	gb|AC159379.14| Mus musculus 10 BAC RP23-210F14 (Roswell Park Ca...	40	9.7
291	emb|AL627283.1| Salmonella enterica serovar Typhi (Salmonella ty...	40	9.7
292	gb|AC156991.9| Mus musculus chromosome 8, clone RP23-297F23, com...	40	9.7
293	emb|BX510930.15| Zebrafish DNA sequence from clone DKEY-91L18 in...	40	9.7
294	gb|CP000268.1| Rhodoferax ferrireducens DSM 15236 plasmid1, comp...	40	9.7
295	gb|AC108100.2| Homo sapiens chromosome 5 clone RP11-125A21, comp...	40	9.7
296	gb|AC010406.7| Homo sapiens chromosome 5 clone CTD-2154H6, compl...	40	9.7
297	gb|AC159542.8| Mus musculus 10 BAC RP23-137B10 (Roswell Park Can...	40	9.7
298	gb|AC136037.2| Rattus norvegicus X BAC CH230-378N18 (Children's ...	40	9.7
299	gb|AF362371.1|AF362371 Dictyostelium discoideum histidine kinase...	40	9.7
300	gb|AC103567.2| Caenorhabditis elegans cosmid Y51F10, complete se...	40	9.7
301	gb|AE002098.2| Neisseria meningitidis MC58, complete genome	40	9.7
302	gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, comple...	40	9.7
303	gb|AC116330.2| Dictyostelium discoideum chromosome 2 map 3191214...	40	9.7
304	gb|AC010423.8| Homo sapiens chromosome 5 clone CTD-2193G5, compl...	40	9.7
305	gb|AE016754.1| Mus musculus chromosome 10 high-growth region, se...	40	9.7
306	emb|CT010464.7| M.truncatula DNA sequence from clone MTH2-95O22 ...	40	9.7
307	gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi...	40	9.7
308	gb|AF041468.1| Guillardia theta complete plastid genome	40	9.7
309	gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole...	40	9.7
310	gb|AE016830.1| Enterococcus faecalis V583, complete genome	40	9.7
311	gb|AC154414.2| Mus musculus BAC clone RP24-231D24 from 16, compl...	40	9.7
312	gb|AC158600.17| Mus musculus 10 BAC RP24-211K19 (Roswell Park Ca...	40	9.7
313	emb|CR385050.10| Zebrafish DNA sequence from clone DKEY-22I16 in...	40	9.7
314	gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete ...	40	9.7

---

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  985 bits (497), Expect = 0.0
 Identities = 632/677 (93%), Gaps = 2/677 (0%)
 Strand = Plus / Plus

                                                                       
Query: 34  ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
           ||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||
Sbjct: 129 ctactagtatttataatacttcagg-agctaatgaaactattttagtataattcaattct 187

                                                                       
Query: 94  ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
           || ||||| ||||||| ||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 188 cttaattcttcggcaaccgcgccaaaaactcgagttccttttggatttcctttttgatca 247

                                                                       
Query: 154 attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
           || ||||| || ||||||||||||||||| |||||||||||||| |||| ||||||||||
Sbjct: 248 atgataactgctgcattgtcatcatagcgtattattataccgtcgtcgcctttgaattct 307

                                                                       
Query: 214 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttacgtgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 367

                                                                       
Query: 274 aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
           | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 368 actgcgtctttgattacagcaataataacatcaccaatacgagcatatcgctgattacca 427

                                                                       
Query: 334 gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
           || ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 428 gcggctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 487

                                                                       
Query: 394 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 488 aaaagggtctgaggttgaatcatattattttgatttccatttgttatttcaatgcaaaag 547

                                                                       
Query: 454 gatgaaagaaatattgtctttccagaaagaaaaaccgggcannnnnnnncttccataccc 513
           |||||||||||||||||||||||||||||||||||| ||          |||| |||| |
Sbjct: 548 gatgaaagaaatattgtctttccagaaagaaaaaccaggggttttttatcttcaatactc 607

                                                                       
Query: 514 ct-tttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggc 572
           || ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 608 ctttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggc 667

                                                                       
Query: 573 cgctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtat 632
            ||||| |||||||||||||||||||||||||| |||||||| | |||||||||||||||
Sbjct: 668 agctatagagatagctgctctagctacagtttcggatactccgctcatttcataaagtat 727

                                                                       
Query: 633 acgacctggtttaacaacggctacccaatattcgggggacccctttcccgagcccatacg 692
            |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 728 tcgacctggtttaacaacggctacccaatattcgggggatccctttcccgagcccatacg 787

                            
Query: 693 tgtttccgtgggtctta 709
           |||||| ||||||||||
Sbjct: 788 tgtttctgtgggtctta 804

---

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  985 bits (497), Expect = 0.0
 Identities = 632/677 (93%), Gaps = 2/677 (0%)
 Strand = Plus / Plus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||
Sbjct: 79686 ctactagtatttataatacttcagg-agctaatgaaactattttagtataattcaattct 79744

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             || ||||| ||||||| ||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 79745 cttaattcttcggcaaccgcgccaaaaactcgagttccttttggatttcctttttgatca 79804

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || ||||| || ||||||||||||||||| |||||||||||||| |||| ||||||||||
Sbjct: 79805 atgataactgctgcattgtcatcatagcgtattattataccgtcgtcgcctttgaattct 79864

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
             |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79865 ttacgtgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 79924

                                                                         
Query: 274   aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
             | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 79925 actgcgtctttgattacagcaataataacatcaccaatacgagcatatcgctgattacca 79984

                                                                         
Query: 334   gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
             || ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 79985 gcggctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 80044

                                                                         
Query: 394   aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 80045 aaaagggtctgaggttgaatcatattattttgatttccatttgttatttcaatgcaaaag 80104

                                                                         
Query: 454   gatgaaagaaatattgtctttccagaaagaaaaaccgggcannnnnnnncttccataccc 513
             |||||||||||||||||||||||||||||||||||| ||          |||| |||| |
Sbjct: 80105 gatgaaagaaatattgtctttccagaaagaaaaaccaggggttttttatcttcaatactc 80164

                                                                         
Query: 514   ct-tttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggc 572
             || ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 80165 ctttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggc 80224

                                                                         
Query: 573   cgctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtat 632
              ||||| |||||||||||||||||||||||||| |||||||| | |||||||||||||||
Sbjct: 80225 agctatagagatagctgctctagctacagtttcggatactccgctcatttcataaagtat 80284

                                                                         
Query: 633   acgacctggtttaacaacggctacccaatattcgggggacccctttcccgagcccatacg 692
              |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 80285 tcgacctggtttaacaacggctacccaatattcgggggatccctttcccgagcccatacg 80344

                              
Query: 693   tgtttccgtgggtctta 709
             |||||| ||||||||||
Sbjct: 80345 tgtttctgtgggtctta 80361

---

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score =  880 bits (444), Expect = 0.0
 Identities = 478/487 (98%), Gaps = 2/487 (0%)
 Strand = Plus / Plus

                                                                         
Query: 8     attaattctttgntnctaaatttcgcctactagtatttataatacttcaggnagctaatg 67
             |||||||||||| | || ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 76999 attaattctttgat-ctcaatttcgcctactagtatttataatacttcagg-agctaatg 77056

                                                                         
Query: 68    aaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcgag 127
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 77057 aaactattttggtaaaattcaatcctctcaattcctcggcaatcgcgccaaaaactcgag 77116

                                                                         
Query: 128   ttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggatta 187
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77117 ttccttttggattgcctttttgatcaattataaccgcagcattgtcatcatagcggatta 77176

                                                                         
Query: 188   ttataccgtcttcgcatttgaattctttacatgtacgtacaattacagctcgaattactt 247
             |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 77177 ttataccgtcttcgcatttgaactctttacatgtacgtacaattacagctcgaattactt 77236

                                                                         
Query: 248   cggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaataacatcac 307
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77237 cggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaataacatcac 77296

                                                                         
Query: 308   caatacgagcatatcgctgattaccagcagctcctatgactcgaatacacatcaattttc 367
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77297 caatacgagcatatcgctgattaccagcagctcctatgactcgaatacacatcaattttc 77356

                                                                         
Query: 368   gagctccactattgtctgctacatttaaaagggtctgaggttgaatcatattattttgat 427
             ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77357 gagctccactattatcggctacatttaaaagggtctgaggttgaatcatattattttgat 77416

                                                                         
Query: 428   ttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaa 487
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77417 ttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaa 77476

                    
Query: 488   ccgggca 494
             |||||||
Sbjct: 77477 ccgggca 77483



 Score =  379 bits (191), Expect = e-102
 Identities = 203/207 (98%)
 Strand = Plus / Plus

                                                                         
Query: 503   cttccataccccttttagggttctatatctctaatcgaataaattgacttcgtatgggca 562
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77496 cttccataccccttttagggttctatatctctaatcgaataaattgacttcgtatgggca 77555

                                                                         
Query: 563   ttttactggccgctatggagatagctgctctagctacagtttcagatactccccccattt 622
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77556 ttttactggcagctatggagatagctgctctagctacagtttcagatactccccccattt 77615

                                                                         
Query: 623   cataaagtatacgacctggtttaacaacggctacccaatattcgggggacccctttcccg 682
             |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 77616 cataaagtatacgaccaggtttaacaacggatacccaatattcgggggacccctttcccg 77675

                                        
Query: 683   agcccatacgtgtttccgtgggtctta 709
             |||||||||||||||| ||||||||||
Sbjct: 77676 agcccatacgtgtttctgtgggtctta 77702

---

>ref|XM_481018.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 793

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                       
Query: 34  ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
           ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 732 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 674

                                                                       
Query: 94  ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
           |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 673 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 614

                                                                       
Query: 154 attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
           || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 613 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 554

                                                                       
Query: 214 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 494

                                                                       
Query: 274 aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
           | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 493 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 434

                                                                       
Query: 334 gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
           |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 433 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 374

                                                                       
Query: 394 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 314

                                               
Query: 454 gatgaaagaaatattgtctttccagaaagaaaaacc 489
           ||||||||||||||||||||||||||||||| ||||
Sbjct: 313 gatgaaagaaatattgtctttccagaaagaagaacc 278



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Minus

                                                                       
Query: 526 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 239 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 180

                                                                       
Query: 586 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
           ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 179 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 120

                                                                       
Query: 646 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
           |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 119 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 60

               
Query: 706 ctta 709
           ||||
Sbjct: 59  ctta 56

---

>ref|XM_481019.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2157

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                        
Query: 34   ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
            ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 1474 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 1416

                                                                        
Query: 94   ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
            |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 1415 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 1356

                                                                        
Query: 154  attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
            || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 1355 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 1296

                                                                        
Query: 214  ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1295 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 1236

                                                                        
Query: 274  aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
            | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1235 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 1176

                                                                        
Query: 334  gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
            |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 1175 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 1116

                                                                        
Query: 394  aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1115 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 1056

                                                
Query: 454  gatgaaagaaatattgtctttccagaaagaaaaacc 489
            ||||||||||||||||||||||||||||||| ||||
Sbjct: 1055 gatgaaagaaatattgtctttccagaaagaagaacc 1020



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Minus

                                                                       
Query: 526 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 981 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 922

                                                                       
Query: 586 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
           ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 921 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 862

                                                                       
Query: 646 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
           |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 861 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 802

               
Query: 706 ctta 709
           ||||
Sbjct: 801 ctta 798

---

>ref|XM_507181.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0036E18.24
            mRNA
          Length = 2157

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                        
Query: 34   ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
            ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 1474 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 1416

                                                                        
Query: 94   ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
            |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 1415 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 1356

                                                                        
Query: 154  attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
            || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 1355 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 1296

                                                                        
Query: 214  ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1295 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 1236

                                                                        
Query: 274  aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
            | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1235 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 1176

                                                                        
Query: 334  gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
            |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 1175 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 1116

                                                                        
Query: 394  aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1115 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 1056

                                                
Query: 454  gatgaaagaaatattgtctttccagaaagaaaaacc 489
            ||||||||||||||||||||||||||||||| ||||
Sbjct: 1055 gatgaaagaaatattgtctttccagaaagaagaacc 1020



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Minus

                                                                       
Query: 526 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 981 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 922

                                                                       
Query: 586 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
           ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 921 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 862

                                                                       
Query: 646 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
           |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 861 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 802

               
Query: 706 ctta 709
           ||||
Sbjct: 801 ctta 798

---

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
             complete genome
          Length = 134551

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 77251 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 77309

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 77310 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 77369

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 77370 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 77429

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77430 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 77489

                                                                         
Query: 274   aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
             | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 77490 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 77549

                                                                         
Query: 334   gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
             |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 77550 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 77609

                                                                         
Query: 394   aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77610 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 77669

                                                 
Query: 454   gatgaaagaaatattgtctttccagaaagaaaaacc 489
             ||||||||||||||||||||||||||||||| ||||
Sbjct: 77670 gatgaaagaaatattgtctttccagaaagaagaacc 77705



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Plus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 77743 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 77802

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 77803 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 77862

                                                                         
Query: 646   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 77863 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 77922

                 
Query: 706   ctta 709
             ||||
Sbjct: 77923 ctta 77926

---

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
             complete genome
          Length = 134551

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 77251 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 77309

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 77310 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 77369

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 77370 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 77429

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77430 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 77489

                                                                         
Query: 274   aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
             | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 77490 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 77549

                                                                         
Query: 334   gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
             |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 77550 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 77609

                                                                         
Query: 394   aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77610 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 77669

                                                 
Query: 454   gatgaaagaaatattgtctttccagaaagaaaaacc 489
             ||||||||||||||||||||||||||||||| ||||
Sbjct: 77670 gatgaaagaaatattgtctttccagaaagaagaacc 77705



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Plus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 77743 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 77802

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 77803 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 77862

                                                                         
Query: 646   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 77863 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 77922

                 
Query: 706   ctta 709
             ||||
Sbjct: 77923 ctta 77926

---

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast,
             complete genome
          Length = 134496

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 77192 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 77250

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 77251 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 77310

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 77311 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 77370

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77371 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 77430

                                                                         
Query: 274   aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
             | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 77431 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 77490

                                                                         
Query: 334   gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
             |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 77491 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 77550

                                                                         
Query: 394   aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77551 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 77610

                                                 
Query: 454   gatgaaagaaatattgtctttccagaaagaaaaacc 489
             ||||||||||||||||||||||||||||||| ||||
Sbjct: 77611 gatgaaagaaatattgtctttccagaaagaagaacc 77646



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Plus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 77687 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 77746

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 77747 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 77806

                                                                         
Query: 646   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 77807 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 77866

                 
Query: 706   ctta 709
             ||||
Sbjct: 77867 ctta 77870

---

>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OSJNBa0034M22, complete sequence
          Length = 149435

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 53262 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 53320

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 53321 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 53380

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 53381 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 53440

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53441 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 53500

                                                                         
Query: 274   aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
             | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 53501 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 53560

                                                                         
Query: 334   gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
             |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 53561 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 53620

                                                                         
Query: 394   aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53621 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 53680

                                                 
Query: 454   gatgaaagaaatattgtctttccagaaagaaaaacc 489
             ||||||||||||||||||||||||||||||| ||||
Sbjct: 53681 gatgaaagaaatattgtctttccagaaagaagaacc 53716



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Plus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 53754 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 53813

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 53814 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 53873

                                                                         
Query: 646   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 53874 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 53933

                 
Query: 706   ctta 709
             ||||
Sbjct: 53934 ctta 53937

---

>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07,
              complete sequence
          Length = 136858

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                          
Query: 34     ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
              ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 126090 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 126148

                                                                          
Query: 94     ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
              |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 126149 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 126208

                                                                          
Query: 154    attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
              || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 126209 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 126268

                                                                          
Query: 214    ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126269 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 126328

                                                                          
Query: 274    aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
              | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 126329 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 126388

                                                                          
Query: 334    gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
              |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 126389 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 126448

                                                                          
Query: 394    aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126449 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 126508

                                                  
Query: 454    gatgaaagaaatattgtctttccagaaagaaaaacc 489
              ||||||||||||||||||||||||||||||| ||||
Sbjct: 126509 gatgaaagaaatattgtctttccagaaagaagaacc 126544



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Plus

                                                                          
Query: 526    tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
              ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 126582 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 126641

                                                                          
Query: 586    gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
              |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 126642 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 126701

                                                                          
Query: 646    acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
              |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 126702 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 126761

                  
Query: 706    ctta 709
              ||||
Sbjct: 126762 ctta 126765

---

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 77238 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 77296

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 77297 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 77356

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 77357 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 77416

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77417 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 77476

                                                                         
Query: 274   aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
             | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 77477 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 77536

                                                                         
Query: 334   gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
             |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 77537 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 77596

                                                                         
Query: 394   aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77597 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 77656

                                                 
Query: 454   gatgaaagaaatattgtctttccagaaagaaaaacc 489
             ||||||||||||||||||||||||||||||| ||||
Sbjct: 77657 gatgaaagaaatattgtctttccagaaagaagaacc 77692



 Score =  246 bits (124), Expect = 8e-62
 Identities = 169/184 (91%)
 Strand = Plus / Plus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 77730 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 77789

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             |||  ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 77790 gctcgtctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 77849

                                                                         
Query: 646   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 77850 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 77909

                 
Query: 706   ctta 709
             ||||
Sbjct: 77910 ctta 77913

---

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
             complete sequence
          Length = 145980

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 73542 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 73484

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 73483 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 73424

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 73423 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 73364

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73363 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 73304

                                                                         
Query: 274   aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
             | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 73303 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 73244

                                                                         
Query: 334   gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
             |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 73243 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 73184

                                                                         
Query: 394   aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73183 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 73124

                                                 
Query: 454   gatgaaagaaatattgtctttccagaaagaaaaacc 489
             ||||||||||||||||||||||||||||||| ||||
Sbjct: 73123 gatgaaagaaatattgtctttccagaaagaagaacc 73088



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Minus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 73009 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 72950

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 72949 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 72890

                                                                         
Query: 646   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 72889 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 72830

                 
Query: 706   ctta 709
             ||||
Sbjct: 72829 ctta 72826



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 526   tatatctctaatcgaataaattgacttcgtatggg 560
             ||||| ||||| |||| ||||||||||||||||||
Sbjct: 73049 tatatttctaaccgaagaaattgacttcgtatggg 73015

---

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 75439 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 75497

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 75498 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 75557

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 75558 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 75617

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75618 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 75677

                                                                         
Query: 274   aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
             | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 75678 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 75737

                                                                         
Query: 334   gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
             |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 75738 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 75797

                                                                         
Query: 394   aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75798 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 75857

                                                 
Query: 454   gatgaaagaaatattgtctttccagaaagaaaaacc 489
             ||||||||||||||||||||||||||||||| ||||
Sbjct: 75858 gatgaaagaaatattgtctttccagaaagaagaacc 75893



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Plus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 75932 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 75991

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 75992 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 76051

                                                                         
Query: 646   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 76052 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 76111

                 
Query: 706   ctta 709
             ||||
Sbjct: 76112 ctta 76115

---

>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                        
Query: 34   ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
            ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 9503 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 9561

                                                                        
Query: 94   ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
            |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 9562 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 9621

                                                                        
Query: 154  attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
            || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 9622 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 9681

                                                                        
Query: 214  ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9682 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 9741

                                                                        
Query: 274  aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
            | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 9742 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 9801

                                                                        
Query: 334  gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
            |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 9802 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 9861

                                                                        
Query: 394  aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9862 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 9921

                                                
Query: 454  gatgaaagaaatattgtctttccagaaagaaaaacc 489
            ||||||||||||||||||||||||||||||| ||||
Sbjct: 9922 gatgaaagaaatattgtctttccagaaagaagaacc 9957



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Plus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 9996  tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 10055

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 10056 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 10115

                                                                         
Query: 646   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 10116 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 10175

                 
Query: 706   ctta 709
             ||||
Sbjct: 10176 ctta 10179

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                           
Query: 34      ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
               ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 9192469 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 9192411

                                                                           
Query: 94      ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
               |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 9192410 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 9192351

                                                                           
Query: 154     attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
               || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 9192350 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 9192291

                                                                           
Query: 214     ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9192290 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 9192231

                                                                           
Query: 274     aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
               | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 9192230 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 9192171

                                                                           
Query: 334     gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
               |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 9192170 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 9192111

                                                                           
Query: 394     aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9192110 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 9192051

                                                   
Query: 454     gatgaaagaaatattgtctttccagaaagaaaaacc 489
               ||||||||||||||||||||||||||||||| ||||
Sbjct: 9192050 gatgaaagaaatattgtctttccagaaagaagaacc 9192015



 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                           
Query: 34      ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
               ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 9115516 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 9115458

                                                                           
Query: 94      ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
               |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 9115457 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 9115398

                                                                           
Query: 154     attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
               || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 9115397 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 9115338

                                                                           
Query: 214     ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9115337 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 9115278

                                                                           
Query: 274     aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
               | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 9115277 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 9115218

                                                                           
Query: 334     gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
               |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 9115217 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 9115158

                                                                           
Query: 394     aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9115157 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 9115098

                                                   
Query: 454     gatgaaagaaatattgtctttccagaaagaaaaacc 489
               ||||||||||||||||||||||||||||||| ||||
Sbjct: 9115097 gatgaaagaaatattgtctttccagaaagaagaacc 9115062



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Minus

                                                                           
Query: 526     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 9191936 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 9191877

                                                                           
Query: 586     gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
               ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 9191876 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 9191817

                                                                           
Query: 646     acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
               |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 9191816 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 9191757

                   
Query: 706     ctta 709
               ||||
Sbjct: 9191756 ctta 9191753



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Minus

                                                                           
Query: 526     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 9114983 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 9114924

                                                                           
Query: 586     gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
               ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 9114923 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 9114864

                                                                           
Query: 646     acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
               |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 9114863 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 9114804

                   
Query: 706     ctta 709
               ||||
Sbjct: 9114803 ctta 9114800



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                                   
Query: 221      tacgtacaattacagctcgaattacttcggatctttctagaggcatttggg 271
                |||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 17722552 tacgtacaattacagctcaaattacttcggatctttccagaggcatttggg 17722502



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 73/84 (86%), Gaps = 4/84 (4%)
 Strand = Plus / Plus

                                                                           
Query: 212     ctttacatgtacgtacaattacagctcgaattact----tcggatctttctagaggcatt 267
               ||||||||||||||||||||||||||||  |||||    || ||||||||||||||||||
Sbjct: 2072703 ctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttctagaggcatt 2072762

                                       
Query: 268     tggggcaatgcgtctttgattaca 291
               | ||||| ||| |||||| |||||
Sbjct: 2072763 ttgggcactgcttctttggttaca 2072786



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 526     tatatctctaatcgaataaattgacttcgtatggg 560
               ||||| ||||| |||| ||||||||||||||||||
Sbjct: 9191976 tatatttctaaccgaagaaattgacttcgtatggg 9191942



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 526     tatatctctaatcgaataaattgacttcgtatggg 560
               ||||| ||||| |||| ||||||||||||||||||
Sbjct: 9115023 tatatttctaaccgaagaaattgacttcgtatggg 9114989

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                            
Query: 34       ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
                ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 10369047 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 10369105

                                                                            
Query: 94       ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
                |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 10369106 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 10369165

                                                                            
Query: 154      attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
                || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 10369166 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 10369225

                                                                            
Query: 214      ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10369226 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 10369285

                                                                            
Query: 274      aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
                | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 10369286 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 10369345

                                                                            
Query: 334      gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
                |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 10369346 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 10369405

                                                                            
Query: 394      aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10369406 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 10369465

                                                    
Query: 454      gatgaaagaaatattgtctttccagaaagaaaaacc 489
                ||||||||||||||||||||||||||||||| ||||
Sbjct: 10369466 gatgaaagaaatattgtctttccagaaagaagaacc 10369501



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Plus

                                                                            
Query: 526      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 10369540 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 10369599

                                                                            
Query: 586      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
                ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 10369600 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 10369659

                                                                            
Query: 646      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
                |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 10369660 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 10369719

                    
Query: 706      ctta 709
                ||||
Sbjct: 10369720 ctta 10369723



 Score =  155 bits (78), Expect = 2e-34
 Identities = 144/165 (87%), Gaps = 7/165 (4%)
 Strand = Plus / Minus

                                                                            
Query: 204      tttgaattctttacatgtacgtacaattacagctcgaattacttcgg----atctttcta 259
                ||||| ||||||||||||||||||||||||||||||  ||||||| |    |||||||||
Sbjct: 14021582 tttgagttctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttcta 14021523

                                                                            
Query: 260      gaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcat 319
                ||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 14021522 gaggcattttgggcactgcttctttgattacagcaacaataacgtcaccaatatgagcat 14021463

                                                             
Query: 320      atcgctgattaccagcagctcctatgactcgaatacacatcaatt 364
                |||  |||||||   ||||||||| || ||||||||| |||||||
Sbjct: 14021462 atcagtgattac---cagctcctaagattcgaatacatatcaatt 14021421

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                           
Query: 34      ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
               ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 9259811 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 9259753

                                                                           
Query: 94      ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
               |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 9259752 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 9259693

                                                                           
Query: 154     attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
               || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 9259692 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 9259633

                                                                           
Query: 214     ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9259632 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 9259573

                                                                           
Query: 274     aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
               | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 9259572 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 9259513

                                                                           
Query: 334     gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
               |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 9259512 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 9259453

                                                                           
Query: 394     aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9259452 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 9259393

                                                   
Query: 454     gatgaaagaaatattgtctttccagaaagaaaaacc 489
               ||||||||||||||||||||||||||||||| ||||
Sbjct: 9259392 gatgaaagaaatattgtctttccagaaagaagaacc 9259357



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Minus

                                                                           
Query: 526     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 9259318 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 9259259

                                                                           
Query: 586     gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
               ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 9259258 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 9259199

                                                                           
Query: 646     acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
               |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 9259198 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 9259139

                   
Query: 706     ctta 709
               ||||
Sbjct: 9259138 ctta 9259135



 Score =  242 bits (122), Expect = 1e-60
 Identities = 158/170 (92%)
 Strand = Plus / Minus

                                                                            
Query: 144      tttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtcttcgca 203
                |||||||||||| |||||| | |||||||  |||||||| ||||||||||| ||||||||
Sbjct: 10791213 tttttgatcaatgataacctctgcattgttgtcatagcgtattattataccatcttcgca 10791154

                                                                            
Query: 204      tttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttctagagg 263
                |||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 10791153 tttgaactctttacatgtatgtacaattacacctcaaattacttcggatctttctagagg 10791094

                                                                  
Query: 264      catttggggcaatgcgtctttgattacagcaacaataacatcaccaatac 313
                ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 10791093 catttggggcactgcgtctttgattacagcaacaataacatcaccaatac 10791044



 Score =  172 bits (87), Expect = 1e-39
 Identities = 146/163 (89%), Gaps = 2/163 (1%)
 Strand = Plus / Plus

                                                                            
Query: 47       taatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcctcgg 106
                |||||||||| | |||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 17206218 taatacttcatg-agcttatgaaactattttagtaaaattcaattctctcaattcctcgg 17206276

                                                                            
Query: 107      caatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcag 166
                | || ||||||||||| | |||||| ||||| || ||||||| |||||| ||||||||||
Sbjct: 17206277 ccattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcag 17206335

                                                           
Query: 167      cattgtcatcatagcggattattataccgtcttcgcatttgaa 209
                || |||  |||||||| ||||||||||||||||||||||||||
Sbjct: 17206336 cactgttgtcatagcgtattattataccgtcttcgcatttgaa 17206378

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                            
Query: 34       ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
                ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 12755803 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 12755861

                                                                            
Query: 94       ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
                |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 12755862 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 12755921

                                                                            
Query: 154      attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
                || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 12755922 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 12755981

                                                                            
Query: 214      ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12755982 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 12756041

                                                                            
Query: 274      aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
                | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 12756042 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 12756101

                                                                            
Query: 334      gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
                |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 12756102 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 12756161

                                                                            
Query: 394      aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12756162 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 12756221

                                                    
Query: 454      gatgaaagaaatattgtctttccagaaagaaaaacc 489
                ||||||||||||||||||||||||||||||| ||||
Sbjct: 12756222 gatgaaagaaatattgtctttccagaaagaagaacc 12756257



 Score =  722 bits (364), Expect = 0.0
 Identities = 434/456 (95%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                            
Query: 34       ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
                ||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||
Sbjct: 19545778 ctactagtatttataatacttcagg-agctaatgaaactagtttagtaaaattcaattct 19545720

                                                                            
Query: 94       ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
                |||||||||||| | |||| ||||||||| |||||||||||||| || ||||||||||||
Sbjct: 19545719 ctcaattcctcgacgatcgtgccaaaaacgcgagttccttttggatttcctttttgatca 19545660

                                                                            
Query: 154      attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
                || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 19545659 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 19545600

                                                                            
Query: 214      ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
                ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 19545599 ttacatgtacgtacaattacagctcgaattacttgagatctttctagaggcatttggggc 19545540

                                                                            
Query: 274      aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
                | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 19545539 actgcgtctttgattacagcaacaataacatcaccaatacgagcatattgctgattacta 19545480

                                                                            
Query: 334      gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
                |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 19545479 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 19545420

                                                                            
Query: 394      aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19545419 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 19545360

                                                    
Query: 454      gatgaaagaaatattgtctttccagaaagaaaaacc 489
                ||||||||||||||||||||||||||||||| ||||
Sbjct: 19545359 gatgaaagaaatattgtctttccagaaagaagaacc 19545324



 Score =  351 bits (177), Expect = 2e-93
 Identities = 195/201 (97%)
 Strand = Plus / Minus

                                                                           
Query: 159     aaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttaca 218
               |||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 3036155 aaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttaca 3036096

                                                                           
Query: 219     tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgc 278
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3036095 tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcactgc 3036036

                                                                           
Query: 279     gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagc 338
               ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3036035 gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagc 3035976

                                    
Query: 339     tcctatgactcgaatacacat 359
               |||||||||||||||||||||
Sbjct: 3035975 tcctatgactcgaatacacat 3035955



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Plus

                                                                            
Query: 526      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 12756295 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 12756354

                                                                            
Query: 586      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
                |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 12756355 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 12756414

                                                                            
Query: 646      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
                |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 12756415 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 12756474

                    
Query: 706      ctta 709
                ||||
Sbjct: 12756475 ctta 12756478



 Score =  246 bits (124), Expect = 8e-62
 Identities = 169/184 (91%)
 Strand = Plus / Minus

                                                                            
Query: 526      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 19545285 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 19545226

                                                                            
Query: 586      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
                ||||||||||||| |||||| |||||||  ||||||||||||||||| |||| |||||||
Sbjct: 19545225 gctgctctagctatagtttcggatactctgcccatttcataaagtattcgacttggttta 19545166

                                                                            
Query: 646      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
                |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 19545165 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttccgtcggt 19545106

                    
Query: 706      ctta 709
                ||||
Sbjct: 19545105 ctta 19545102



 Score =  174 bits (88), Expect = 3e-40
 Identities = 235/280 (83%), Gaps = 3/280 (1%)
 Strand = Plus / Plus

                                                                           
Query: 64      aatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaact 123
               ||||||| ||||||  || |||||||||||||||||||| |||| |||  ||||||||| 
Sbjct: 3109053 aatgaaattattttaatacaattcaattctctcaattcc-cggcgatcatgccaaaaacg 3109111

                                                                           
Query: 124     cgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcgg 183
                |||| || ||||| || | ||||||||| || |||||||  | ||  ||  ||||||| 
Sbjct: 3109112 tgagtgccctttggatttcttttttgatcgatgataaccgttgtata-tcggcatagcgt 3109170

                                                                           
Query: 184     attattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctcgaatt 243
               |||||||||| || ||| |||||||| ||||||||||||| || ||||||  ||| ||||
Sbjct: 3109171 attattatactgt-ttcacatttgaactctttacatgtacatataattacttctctaatt 3109229

                                                                           
Query: 244     acttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaataaca 303
               |||| || ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||
Sbjct: 3109230 actttgggtctttctagaggcatttggggcactgcatctttcattacagcaacaataaca 3109289

                                                       
Query: 304     tcaccaatacgagcatatcgctgattaccagcagctccta 343
               ||| ||||| |||||||| | ||||||| |||||| ||||
Sbjct: 3109290 tcatcaatatgagcatattgttgattactagcagcaccta 3109329



 Score =  107 bits (54), Expect = 5e-20
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                           
Query: 386     ctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaa 445
               |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3109364 ctacatttaaaagggtttgaggttgaatcatattattttgatgtcaatttgttatttcaa 3109423

                 
Query: 446     tg 447
               ||
Sbjct: 3109424 tg 3109425



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 427     tttcaatttgttatttcaatgcaaa 451
               ||||||||||| |||||||||||||
Sbjct: 4108954 tttcaatttgtaatttcaatgcaaa 4108978

---

>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 71024 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 70966

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 70965 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 70906

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 70905 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 70846

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70845 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 70786

                                                                         
Query: 274   aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
             | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 70785 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 70726

                                                                         
Query: 334   gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
             |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 70725 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 70666

                                                                         
Query: 394   aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70665 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 70606

                                                 
Query: 454   gatgaaagaaatattgtctttccagaaagaaaaacc 489
             ||||||||||||||||||||||||||||||| ||||
Sbjct: 70605 gatgaaagaaatattgtctttccagaaagaagaacc 70570



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Minus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 70531 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 70472

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 70471 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 70412

                                                                         
Query: 646   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 70411 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 70352

                 
Query: 706   ctta 709
             ||||
Sbjct: 70351 ctta 70348

---

>dbj|AK105308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B12, full
            insert sequence
          Length = 2166

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                        
Query: 34   ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
            ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 1482 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 1424

                                                                        
Query: 94   ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
            |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 1423 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 1364

                                                                        
Query: 154  attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
            || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 1363 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 1304

                                                                        
Query: 214  ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1303 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 1244

                                                                        
Query: 274  aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
            | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1243 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 1184

                                                                        
Query: 334  gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
            |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 1183 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 1124

                                                                        
Query: 394  aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1123 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 1064

                                                
Query: 454  gatgaaagaaatattgtctttccagaaagaaaaacc 489
            ||||||||||||||||||||||||||||||| ||||
Sbjct: 1063 gatgaaagaaatattgtctttccagaaagaagaacc 1028



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                       
Query: 526 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 990 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 931

                                                                       
Query: 586 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
           |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 930 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 871

                                                                       
Query: 646 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
           |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 870 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 811

               
Query: 706 ctta 709
           ||||
Sbjct: 810 ctta 807

---

>dbj|AK071967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G06, full
            insert sequence
          Length = 1764

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                        
Query: 34   ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
            ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 1697 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 1639

                                                                        
Query: 94   ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
            |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 1638 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 1579

                                                                        
Query: 154  attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
            || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 1578 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 1519

                                                                        
Query: 214  ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1518 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 1459

                                                                        
Query: 274  aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
            | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1458 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 1399

                                                                        
Query: 334  gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
            |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 1398 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 1339

                                                                        
Query: 394  aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1338 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 1279

                                                
Query: 454  gatgaaagaaatattgtctttccagaaagaaaaacc 489
            ||||||||||||||||||||||||||||||| ||||
Sbjct: 1278 gatgaaagaaatattgtctttccagaaagaagaacc 1243



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                        
Query: 526  tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
            ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 1205 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 1146

                                                                        
Query: 586  gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
            |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 1145 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 1086

                                                                        
Query: 646  acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
            |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 1085 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 1026

                
Query: 706  ctta 709
            ||||
Sbjct: 1025 ctta 1022

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  769 bits (388), Expect = 0.0
 Identities = 440/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                            
Query: 34       ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
                ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 10375086 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 10375144

                                                                            
Query: 94       ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
                |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 10375145 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 10375204

                                                                            
Query: 154      attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
                || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 10375205 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 10375264

                                                                            
Query: 214      ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10375265 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 10375324

                                                                            
Query: 274      aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
                | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 10375325 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 10375384

                                                                            
Query: 334      gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
                |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 10375385 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 10375444

                                                                            
Query: 394      aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10375445 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 10375504

                                                    
Query: 454      gatgaaagaaatattgtctttccagaaagaaaaacc 489
                ||||||||||||||||||||||||||||||| ||||
Sbjct: 10375505 gatgaaagaaatattgtctttccagaaagaagaacc 10375540



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Plus

                                                                            
Query: 526      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 10375579 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 10375638

                                                                            
Query: 586      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
                ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 10375639 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 10375698

                                                                            
Query: 646      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
                |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 10375699 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 10375758

                    
Query: 706      ctta 709
                ||||
Sbjct: 10375759 ctta 10375762



 Score =  155 bits (78), Expect = 2e-34
 Identities = 144/165 (87%), Gaps = 7/165 (4%)
 Strand = Plus / Minus

                                                                            
Query: 204      tttgaattctttacatgtacgtacaattacagctcgaattacttcgg----atctttcta 259
                ||||| ||||||||||||||||||||||||||||||  ||||||| |    |||||||||
Sbjct: 14029824 tttgagttctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttcta 14029765

                                                                            
Query: 260      gaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcat 319
                ||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 14029764 gaggcattttgggcactgcttctttgattacagcaacaataacgtcaccaatatgagcat 14029705

                                                             
Query: 320      atcgctgattaccagcagctcctatgactcgaatacacatcaatt 364
                |||  |||||||   ||||||||| || ||||||||| |||||||
Sbjct: 14029704 atcagtgattac---cagctcctaagattcgaatacatatcaatt 14029663

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  761 bits (384), Expect = 0.0
 Identities = 439/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                           
Query: 34      ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
               ||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||
Sbjct: 5656701 ctactagtatttataatacttcagg-agctaatgaaactattgtagtaaaattcaattct 5656759

                                                                           
Query: 94      ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
               |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 5656760 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 5656819

                                                                           
Query: 154     attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
               || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 5656820 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 5656879

                                                                           
Query: 214     ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5656880 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 5656939

                                                                           
Query: 274     aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
               | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5656940 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 5656999

                                                                           
Query: 334     gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
               |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 5657000 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 5657059

                                                                           
Query: 394     aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5657060 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 5657119

                                                   
Query: 454     gatgaaagaaatattgtctttccagaaagaaaaacc 489
               ||||||||||||||||||||||||||||||| ||||
Sbjct: 5657120 gatgaaagaaatattgtctttccagaaagaagaacc 5657155



 Score =  349 bits (176), Expect = 8e-93
 Identities = 213/224 (95%), Gaps = 1/224 (0%)
 Strand = Plus / Plus

                                                                            
Query: 34       ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
                ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 20514213 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 20514271

                                                                            
Query: 94       ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
                |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 20514272 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 20514331

                                                                            
Query: 154      attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
                || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 20514332 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 20514391

                                                            
Query: 214      ttacatgtacgtacaattacagctcgaattacttcggatctttc 257
                ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20514392 ttacatgtacgtacaattacagctcgaattacttcggatctttc 20514435



 Score =  198 bits (100), Expect = 2e-47
 Identities = 133/144 (92%)
 Strand = Plus / Plus

                                                                           
Query: 526     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 5657194 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 5657253

                                                                           
Query: 586     gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
               |||||| |||||||| |||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 5657254 gctgctatagctacaatttcggatactccgcccatttcataaagtattcgacctggttta 5657313

                                       
Query: 646     acaacggctacccaatattcgggg 669
               ||||||||||||||||||||||||
Sbjct: 5657314 acaacggctacccaatattcgggg 5657337



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 71       ctattttggtaaaattcaattctctcaattc 101
                ||||||| |||||||||||||||||||||||
Sbjct: 25823760 ctattttagtaaaattcaattctctcaattc 25823730

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  761 bits (384), Expect = 0.0
 Identities = 439/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                            
Query: 34       ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
                ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 33497017 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 33497075

                                                                            
Query: 94       ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
                |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 33497076 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 33497135

                                                                            
Query: 154      attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
                || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 33497136 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 33497195

                                                                            
Query: 214      ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33497196 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 33497255

                                                                            
Query: 274      aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
                | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 33497256 actgcatctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 33497315

                                                                            
Query: 334      gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
                |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 33497316 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 33497375

                                                                            
Query: 394      aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33497376 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 33497435

                                                    
Query: 454      gatgaaagaaatattgtctttccagaaagaaaaacc 489
                ||||||||||||||||||||||||||||||| ||||
Sbjct: 33497436 gatgaaagaaatattgtctttccagaaagaagaacc 33497471



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Plus

                                                                            
Query: 526      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 33497509 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 33497568

                                                                            
Query: 586      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
                ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 33497569 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 33497628

                                                                            
Query: 646      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
                |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 33497629 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 33497688

                    
Query: 706      ctta 709
                ||||
Sbjct: 33497689 ctta 33497692



 Score =  145 bits (73), Expect = 2e-31
 Identities = 160/189 (84%)
 Strand = Plus / Minus

                                                                            
Query: 133      tttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattata 192
                ||||| || |||||||||||||| |||||  | |||||||  | |||| | |||||||||
Sbjct: 30976459 tttggatttcctttttgatcaatgataacgactgcattgttgttatagagtattattata 30976400

                                                                            
Query: 193      ccgtcttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggat 252
                |||| || ||||||||| ||  |||||||| | |||||||||| ||| |||||||  |||
Sbjct: 30976399 ccgtttttgcatttgaaatccatacatgtatgcacaattacagatcgtattacttttgat 30976340

                                                                            
Query: 253      ctttctagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaata 312
                |||||||||||||| | || || ||| ||||| |||||||||||||||||||||||||||
Sbjct: 30976339 ctttctagaggcatcttggacactgcatcttttattacagcaacaataacatcaccaata 30976280

                         
Query: 313      cgagcatat 321
                |||| ||||
Sbjct: 30976279 cgagtatat 30976271



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                            
Query: 597      tacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctac 656
                |||||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||
Sbjct: 15131590 tacagtttcagatactccgcccttttcataaagtactcgacctggtttaacaacggctac 15131531



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 101/124 (81%), Gaps = 8/124 (6%)
 Strand = Plus / Minus

                                                                            
Query: 115      ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 174
                ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 39109319 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 39109268

                                                                            
Query: 175      tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 234
                ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||| 
Sbjct: 39109267 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattact 39109208

                    
Query: 235      gctc 238
                ||||
Sbjct: 39109207 gctc 39109204



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 115      ccaaaaactcgagttccttttgggttgcctttttgat 151
                ||||||||||||||||||||||| || |||| |||||
Sbjct: 39108053 ccaaaaactcgagttccttttggatttccttcttgat 39108017



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 115      ccaaaaactcgagttccttttgggttgcctttttgat 151
                ||||||||||||||||||||||| || |||| |||||
Sbjct: 39103979 ccaaaaactcgagttccttttggatttccttcttgat 39103943

---

>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0557A01
          Length = 147201

 Score =  761 bits (384), Expect = 0.0
 Identities = 439/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 42214 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 42272

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 42273 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 42332

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 42333 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 42392

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42393 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 42452

                                                                         
Query: 274   aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
             | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 42453 actgcatctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 42512

                                                                         
Query: 334   gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
             |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 42513 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 42572

                                                                         
Query: 394   aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42573 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 42632

                                                 
Query: 454   gatgaaagaaatattgtctttccagaaagaaaaacc 489
             ||||||||||||||||||||||||||||||| ||||
Sbjct: 42633 gatgaaagaaatattgtctttccagaaagaagaacc 42668



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Plus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 42706 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 42765

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 42766 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 42825

                                                                         
Query: 646   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 42826 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 42885

                 
Query: 706   ctta 709
             ||||
Sbjct: 42886 ctta 42889

---

>dbj|AK063122.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-E09, full
           insert sequence
          Length = 792

 Score =  761 bits (384), Expect = 0.0
 Identities = 439/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                       
Query: 34  ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
           ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 731 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 673

                                                                       
Query: 94  ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
           |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 672 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 613

                                                                       
Query: 154 attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
           || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 612 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 553

                                                                       
Query: 214 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 552 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggagc 493

                                                                       
Query: 274 aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
           | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 492 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 433

                                                                       
Query: 334 gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
           |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 432 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 373

                                                                       
Query: 394 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 313

                                               
Query: 454 gatgaaagaaatattgtctttccagaaagaaaaacc 489
           ||||||||||||||||||||||||||||||| ||||
Sbjct: 312 gatgaaagaaatattgtctttccagaaagaagaacc 277



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                       
Query: 526 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
           ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 239 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 180

                                                                       
Query: 586 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
           |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 179 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 120

                                                                       
Query: 646 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
           |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 119 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 60

               
Query: 706 ctta 709
           ||||
Sbjct: 59  ctta 56

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  761 bits (384), Expect = 0.0
 Identities = 439/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                           
Query: 34      ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
               ||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||
Sbjct: 5656694 ctactagtatttataatacttcagg-agctaatgaaactattgtagtaaaattcaattct 5656752

                                                                           
Query: 94      ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
               |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 5656753 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 5656812

                                                                           
Query: 154     attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
               || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 5656813 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 5656872

                                                                           
Query: 214     ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5656873 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 5656932

                                                                           
Query: 274     aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
               | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5656933 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 5656992

                                                                           
Query: 334     gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
               |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 5656993 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 5657052

                                                                           
Query: 394     aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5657053 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 5657112

                                                   
Query: 454     gatgaaagaaatattgtctttccagaaagaaaaacc 489
               ||||||||||||||||||||||||||||||| ||||
Sbjct: 5657113 gatgaaagaaatattgtctttccagaaagaagaacc 5657148



 Score =  349 bits (176), Expect = 8e-93
 Identities = 213/224 (95%), Gaps = 1/224 (0%)
 Strand = Plus / Plus

                                                                            
Query: 34       ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
                ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 20440427 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 20440485

                                                                            
Query: 94       ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
                |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 20440486 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 20440545

                                                                            
Query: 154      attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
                || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 20440546 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 20440605

                                                            
Query: 214      ttacatgtacgtacaattacagctcgaattacttcggatctttc 257
                ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20440606 ttacatgtacgtacaattacagctcgaattacttcggatctttc 20440649



 Score =  198 bits (100), Expect = 2e-47
 Identities = 133/144 (92%)
 Strand = Plus / Plus

                                                                           
Query: 526     tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
               ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 5657187 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 5657246

                                                                           
Query: 586     gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
               |||||| |||||||| |||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 5657247 gctgctatagctacaatttcggatactccgcccatttcataaagtattcgacctggttta 5657306

                                       
Query: 646     acaacggctacccaatattcgggg 669
               ||||||||||||||||||||||||
Sbjct: 5657307 acaacggctacccaatattcgggg 5657330



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 71       ctattttggtaaaattcaattctctcaattc 101
                ||||||| |||||||||||||||||||||||
Sbjct: 25751936 ctattttagtaaaattcaattctctcaattc 25751906

---

>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 159056

 Score =  761 bits (384), Expect = 0.0
 Identities = 439/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||
Sbjct: 11224 ctactagtatttataatacttcagg-agctaatgaaactattgtagtaaaattcaattct 11282

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 11283 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 11342

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 11343 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 11402

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11403 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 11462

                                                                         
Query: 274   aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
             | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 11463 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 11522

                                                                         
Query: 334   gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
             |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 11523 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 11582

                                                                         
Query: 394   aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11583 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 11642

                                                 
Query: 454   gatgaaagaaatattgtctttccagaaagaaaaacc 489
             ||||||||||||||||||||||||||||||| ||||
Sbjct: 11643 gatgaaagaaatattgtctttccagaaagaagaacc 11678



 Score =  198 bits (100), Expect = 2e-47
 Identities = 133/144 (92%)
 Strand = Plus / Plus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 11717 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 11776

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             |||||| |||||||| |||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 11777 gctgctatagctacaatttcggatactccgcccatttcataaagtattcgacctggttta 11836

                                     
Query: 646   acaacggctacccaatattcgggg 669
             ||||||||||||||||||||||||
Sbjct: 11837 acaacggctacccaatattcgggg 11860

---

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  761 bits (384), Expect = 0.0
 Identities = 439/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 77194 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 77252

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 77253 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 77312

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 77313 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 77372

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77373 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 77432

                                                                         
Query: 274   aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
             | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 77433 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 77492

                                                                         
Query: 334   gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
             ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 77493 gcagctcctatgactcgaatacacatcaattttcgagctccgctgttatctgctacattt 77552

                                                                         
Query: 394   aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77553 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 77612

                                                 
Query: 454   gatgaaagaaatattgtctttccagaaagaaaaacc 489
             ||||||||||||||||||||||||||||||| ||||
Sbjct: 77613 gatgaaagaaatattgtctttccagaaagaagaacc 77648



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Plus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 77687 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 77746

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 77747 gctactctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 77806

                                                                         
Query: 646   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 77807 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 77866

                 
Query: 706   ctta 709
             ||||
Sbjct: 77867 ctta 77870

---

>ref|XM_479424.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2154

 Score =  753 bits (380), Expect = 0.0
 Identities = 438/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                        
Query: 34   ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
            ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 1472 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 1414

                                                                        
Query: 94   ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
            |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 1413 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 1354

                                                                        
Query: 154  attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
            || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 1353 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 1294

                                                                        
Query: 214  ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1293 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 1234

                                                                        
Query: 274  aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
            | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1233 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 1174

                                                                        
Query: 334  gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
            ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||
Sbjct: 1173 gcagctcctatgactcgaatacacatcaatttttgagctccactgttatctgctacattt 1114

                                                                        
Query: 394  aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 1054

                                                
Query: 454  gatgaaagaaatattgtctttccagaaagaaaaacc 489
            |||||||||||||| |||||||||||||||| ||||
Sbjct: 1053 gatgaaagaaatatcgtctttccagaaagaagaacc 1018



 Score =  240 bits (121), Expect = 5e-60
 Identities = 160/173 (92%)
 Strand = Plus / Minus

                                                                       
Query: 526 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
           ||||| ||||| || | |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 980 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagctatggaaata 921

                                                                       
Query: 586 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
           |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 920 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 861

                                                                
Query: 646 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
           ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 860 acaacggatacccaatattcgggggatccctttcccgaacccatacgtgtttc 808

---

>ref|XM_479423.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2154

 Score =  753 bits (380), Expect = 0.0
 Identities = 438/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                        
Query: 34   ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
            ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 1472 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 1414

                                                                        
Query: 94   ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
            |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 1413 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 1354

                                                                        
Query: 154  attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
            || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 1353 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 1294

                                                                        
Query: 214  ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1293 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 1234

                                                                        
Query: 274  aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
            | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1233 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 1174

                                                                        
Query: 334  gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
            ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||
Sbjct: 1173 gcagctcctatgactcgaatacacatcaatttttgagctccactgttatctgctacattt 1114

                                                                        
Query: 394  aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 1054

                                                
Query: 454  gatgaaagaaatattgtctttccagaaagaaaaacc 489
            |||||||||||||| |||||||||||||||| ||||
Sbjct: 1053 gatgaaagaaatatcgtctttccagaaagaagaacc 1018



 Score =  240 bits (121), Expect = 5e-60
 Identities = 160/173 (92%)
 Strand = Plus / Minus

                                                                       
Query: 526 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
           ||||| ||||| || | |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 980 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagctatggaaata 921

                                                                       
Query: 586 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
           |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 920 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 861

                                                                
Query: 646 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
           ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 860 acaacggatacccaatattcgggggatccctttcccgaacccatacgtgtttc 808

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  753 bits (380), Expect = 0.0
 Identities = 438/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                            
Query: 34       ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
                ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 27922734 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 27922792

                                                                            
Query: 94       ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
                |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 27922793 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 27922852

                                                                            
Query: 154      attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
                || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 27922853 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 27922912

                                                                            
Query: 214      ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27922913 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 27922972

                                                                            
Query: 274      aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
                | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 27922973 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 27923032

                                                                            
Query: 334      gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
                ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||
Sbjct: 27923033 gcagctcctatgactcgaatacacatcaatttttgagctccactgttatctgctacattt 27923092

                                                                            
Query: 394      aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27923093 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 27923152

                                                    
Query: 454      gatgaaagaaatattgtctttccagaaagaaaaacc 489
                |||||||||||||| |||||||||||||||| ||||
Sbjct: 27923153 gatgaaagaaatatcgtctttccagaaagaagaacc 27923188



 Score =  240 bits (121), Expect = 5e-60
 Identities = 160/173 (92%)
 Strand = Plus / Plus

                                                                            
Query: 526      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
                ||||| ||||| || | |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 27923226 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagctatggaaata 27923285

                                                                            
Query: 586      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
                |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 27923286 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 27923345

                                                                     
Query: 646      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
                ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 27923346 acaacggatacccaatattcgggggatccctttcccgaacccatacgtgtttc 27923398



 Score =  141 bits (71), Expect = 4e-30
 Identities = 126/143 (88%), Gaps = 1/143 (0%)
 Strand = Plus / Minus

                                                                           
Query: 67      gaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcga 126
               ||||||||||| |||||||||||||||||||||| |||| | |||||||||||||| | |
Sbjct: 4509148 gaaactattttagtaaaattcaattctctcaattactcgacgatcgcgccaaaaacgcaa 4509089

                                                                           
Query: 127     gttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggatt 186
               ||||| ||||| || ||||||| |  ||| ||| |||  ||||||||||||||||| |||
Sbjct: 4509088 gttccatttggatttccttttt-actaatgatatccgttgcattgtcatcatagcgtatt 4509030

                                      
Query: 187     attataccgtcttcgcatttgaa 209
               |||||||||||||||||||||||
Sbjct: 4509029 attataccgtcttcgcatttgaa 4509007

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  753 bits (380), Expect = 0.0
 Identities = 438/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                            
Query: 34       ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
                ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 23181851 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 23181793

                                                                            
Query: 94       ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
                |||||||||||||| |||| |||||||||  ||||||||||||| || ||||||||||||
Sbjct: 23181792 ctcaattcctcggcgatcgtgccaaaaacgtgagttccttttggatttcctttttgatca 23181733

                                                                            
Query: 154      attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
                || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 23181732 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 23181673

                                                                            
Query: 214      ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23181672 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 23181613

                                                                            
Query: 274      aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
                | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 23181612 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 23181553

                                                                            
Query: 334      gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
                |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 23181552 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 23181493

                                                                            
Query: 394      aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23181492 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 23181433

                                                    
Query: 454      gatgaaagaaatattgtctttccagaaagaaaaacc 489
                ||||||||||||||||||||||||||||||| ||||
Sbjct: 23181432 gatgaaagaaatattgtctttccagaaagaagaacc 23181397



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                            
Query: 526      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 23181359 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 23181300

                                                                            
Query: 586      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
                |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 23181299 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 23181240

                                                                            
Query: 646      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
                |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 23181239 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 23181180

                    
Query: 706      ctta 709
                ||||
Sbjct: 23181179 ctta 23181176

---

>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453E03
          Length = 159980

 Score =  753 bits (380), Expect = 0.0
 Identities = 438/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 86092 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 86150

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 86151 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 86210

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 86211 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 86270

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86271 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 86330

                                                                         
Query: 274   aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
             | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 86331 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 86390

                                                                         
Query: 334   gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
             ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||
Sbjct: 86391 gcagctcctatgactcgaatacacatcaatttttgagctccactgttatctgctacattt 86450

                                                                         
Query: 394   aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86451 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 86510

                                                 
Query: 454   gatgaaagaaatattgtctttccagaaagaaaaacc 489
             |||||||||||||| |||||||||||||||| ||||
Sbjct: 86511 gatgaaagaaatatcgtctttccagaaagaagaacc 86546



 Score =  240 bits (121), Expect = 5e-60
 Identities = 160/173 (92%)
 Strand = Plus / Plus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| || | |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 86584 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagctatggaaata 86643

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 86644 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 86703

                                                                  
Query: 646   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
             ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 86704 acaacggatacccaatattcgggggatccctttcccgaacccatacgtgtttc 86756

---

>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_D04
          Length = 143407

 Score =  753 bits (380), Expect = 0.0
 Identities = 438/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 12068 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 12126

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 12127 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 12186

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 12187 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 12246

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12247 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 12306

                                                                         
Query: 274   aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
             | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 12307 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 12366

                                                                         
Query: 334   gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
             ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||
Sbjct: 12367 gcagctcctatgactcgaatacacatcaatttttgagctccactgttatctgctacattt 12426

                                                                         
Query: 394   aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12427 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 12486

                                                 
Query: 454   gatgaaagaaatattgtctttccagaaagaaaaacc 489
             |||||||||||||| |||||||||||||||| ||||
Sbjct: 12487 gatgaaagaaatatcgtctttccagaaagaagaacc 12522



 Score =  240 bits (121), Expect = 5e-60
 Identities = 160/173 (92%)
 Strand = Plus / Plus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| || | |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 12560 tatatttctaaccggagaaattgacttcgtatgggcattttgctggcagctatggaaata 12619

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 12620 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 12679

                                                                  
Query: 646   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
             ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 12680 acaacggatacccaatattcgggggatccctttcccgaacccatacgtgtttc 12732

---

>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0417D05
          Length = 165752

 Score =  753 bits (380), Expect = 0.0
 Identities = 438/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                          
Query: 34     ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
              ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 132499 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 132441

                                                                          
Query: 94     ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
              |||||||||||||| |||| |||||||||  ||||||||||||| || ||||||||||||
Sbjct: 132440 ctcaattcctcggcgatcgtgccaaaaacgtgagttccttttggatttcctttttgatca 132381

                                                                          
Query: 154    attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
              || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 132380 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 132321

                                                                          
Query: 214    ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132320 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 132261

                                                                          
Query: 274    aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
              | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 132260 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 132201

                                                                          
Query: 334    gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
              |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 132200 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 132141

                                                                          
Query: 394    aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132140 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 132081

                                                  
Query: 454    gatgaaagaaatattgtctttccagaaagaaaaacc 489
              ||||||||||||||||||||||||||||||| ||||
Sbjct: 132080 gatgaaagaaatattgtctttccagaaagaagaacc 132045



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                          
Query: 526    tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
              ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 132007 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 131948

                                                                          
Query: 586    gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
              |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 131947 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 131888

                                                                          
Query: 646    acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
              |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 131887 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 131828

                  
Query: 706    ctta 709
              ||||
Sbjct: 131827 ctta 131824

---

>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0642B07
          Length = 139297

 Score =  753 bits (380), Expect = 0.0
 Identities = 438/456 (96%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 16613 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 16555

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||||||| |||| |||||||||  ||||||||||||| || ||||||||||||
Sbjct: 16554 ctcaattcctcggcgatcgtgccaaaaacgtgagttccttttggatttcctttttgatca 16495

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 16494 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 16435

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16434 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 16375

                                                                         
Query: 274   aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
             | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 16374 actgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacta 16315

                                                                         
Query: 334   gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
             |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 16314 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 16255

                                                                         
Query: 394   aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16254 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 16195

                                                 
Query: 454   gatgaaagaaatattgtctttccagaaagaaaaacc 489
             ||||||||||||||||||||||||||||||| ||||
Sbjct: 16194 gatgaaagaaatattgtctttccagaaagaagaacc 16159



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 16121 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 16062

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 16061 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 16002

                                                                         
Query: 646   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 16001 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 15942

                 
Query: 706   ctta 709
             ||||
Sbjct: 15941 ctta 15938

---

>ref|XM_450630.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 793

 Score =  729 bits (368), Expect = 0.0
 Identities = 435/456 (95%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                       
Query: 34  ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
           ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 732 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 674

                                                                       
Query: 94  ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
           |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 673 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 614

                                                                       
Query: 154 attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
           || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 613 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 554

                                                                       
Query: 214 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 494

                                                                       
Query: 274 aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
           | | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 493 actacgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgactacta 434

                                                                       
Query: 334 gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
           |||||||||||||||||||||||||| ||||||||||||||| | || ||||||||||||
Sbjct: 433 gcagctcctatgactcgaatacacattaattttcgagctccagtgttatctgctacattt 374

                                                                       
Query: 394 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 373 aaaagggtctgaggttgaatcatattattttgatttcaatttattatttcaatgcaaaag 314

                                               
Query: 454 gatgaaagaaatattgtctttccagaaagaaaaacc 489
           ||||||||||||||||||||||||||||||| ||||
Sbjct: 313 gatgaaagaaatattgtctttccagaaagaagaacc 278



 Score =  238 bits (120), Expect = 2e-59
 Identities = 168/184 (91%)
 Strand = Plus / Minus

                                                                       
Query: 526 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
           ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||| |||
Sbjct: 239 tatatttctaaccgaagaaattgacttcgtatgggcattttgctagcagctatggaaata 180

                                                                       
Query: 586 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
           |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 179 gctgctctagctacagtttcggatactccgcccattttataaagtattcgacctggttta 120

                                                                       
Query: 646 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
           |||||||||||||||||||||||||| ||||||||||| |||||| ||||||| || |||
Sbjct: 119 acaacggctacccaatattcgggggatccctttcccgaacccatatgtgtttcggtcggt 60

               
Query: 706 ctta 709
           ||||
Sbjct: 59  ctta 56

---

>ref|XM_450631.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2141

 Score =  729 bits (368), Expect = 0.0
 Identities = 435/456 (95%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                        
Query: 34   ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
            ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 1460 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 1402

                                                                        
Query: 94   ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
            |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 1401 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 1342

                                                                        
Query: 154  attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
            || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 1341 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 1282

                                                                        
Query: 214  ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1281 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 1222

                                                                        
Query: 274  aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
            | | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 1221 actacgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgactacta 1162

                                                                        
Query: 334  gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
            |||||||||||||||||||||||||| ||||||||||||||| | || ||||||||||||
Sbjct: 1161 gcagctcctatgactcgaatacacattaattttcgagctccagtgttatctgctacattt 1102

                                                                        
Query: 394  aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1101 aaaagggtctgaggttgaatcatattattttgatttcaatttattatttcaatgcaaaag 1042

                                                
Query: 454  gatgaaagaaatattgtctttccagaaagaaaaacc 489
            ||||||||||||||||||||||||||||||| ||||
Sbjct: 1041 gatgaaagaaatattgtctttccagaaagaagaacc 1006



 Score =  238 bits (120), Expect = 2e-59
 Identities = 168/184 (91%)
 Strand = Plus / Minus

                                                                       
Query: 526 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
           ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||| |||
Sbjct: 967 tatatttctaaccgaagaaattgacttcgtatgggcattttgctagcagctatggaaata 908

                                                                       
Query: 586 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
           |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 907 gctgctctagctacagtttcggatactccgcccattttataaagtattcgacctggttta 848

                                                                       
Query: 646 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
           |||||||||||||||||||||||||| ||||||||||| |||||| ||||||| || |||
Sbjct: 847 acaacggctacccaatattcgggggatccctttcccgaacccatatgtgtttcggtcggt 788

               
Query: 706 ctta 709
           ||||
Sbjct: 787 ctta 784

---

>ref|XM_506652.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1001_G09.24 mRNA
          Length = 1742

 Score =  729 bits (368), Expect = 0.0
 Identities = 435/456 (95%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                        
Query: 34   ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
            ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 1675 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 1617

                                                                        
Query: 94   ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
            |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 1616 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 1557

                                                                        
Query: 154  attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
            || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 1556 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 1497

                                                                        
Query: 214  ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1496 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 1437

                                                                        
Query: 274  aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
            | | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 1436 actacgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgactacta 1377

                                                                        
Query: 334  gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
            |||||||||||||||||||||||||| ||||||||||||||| | || ||||||||||||
Sbjct: 1376 gcagctcctatgactcgaatacacattaattttcgagctccagtgttatctgctacattt 1317

                                                                        
Query: 394  aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1316 aaaagggtctgaggttgaatcatattattttgatttcaatttattatttcaatgcaaaag 1257

                                                
Query: 454  gatgaaagaaatattgtctttccagaaagaaaaacc 489
            ||||||||||||||||||||||||||||||| ||||
Sbjct: 1256 gatgaaagaaatattgtctttccagaaagaagaacc 1221



 Score =  238 bits (120), Expect = 2e-59
 Identities = 168/184 (91%)
 Strand = Plus / Minus

                                                                        
Query: 526  tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
            ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||| |||
Sbjct: 1182 tatatttctaaccgaagaaattgacttcgtatgggcattttgctagcagctatggaaata 1123

                                                                        
Query: 586  gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
            |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 1122 gctgctctagctacagtttcggatactccgcccattttataaagtattcgacctggttta 1063

                                                                        
Query: 646  acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
            |||||||||||||||||||||||||| ||||||||||| |||||| ||||||| || |||
Sbjct: 1062 acaacggctacccaatattcgggggatccctttcccgaacccatatgtgtttcggtcggt 1003

                
Query: 706  ctta 709
            ||||
Sbjct: 1002 ctta 999

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  729 bits (368), Expect = 0.0
 Identities = 435/456 (95%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                            
Query: 34       ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
                ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 11896632 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 11896574

                                                                            
Query: 94       ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
                |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 11896573 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 11896514

                                                                            
Query: 154      attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
                || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 11896513 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 11896454

                                                                            
Query: 214      ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11896453 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 11896394

                                                                            
Query: 274      aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
                | | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 11896393 actacgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgactacta 11896334

                                                                            
Query: 334      gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
                |||||||||||||||||||||||||| ||||||||||||||| | || ||||||||||||
Sbjct: 11896333 gcagctcctatgactcgaatacacattaattttcgagctccagtgttatctgctacattt 11896274

                                                                            
Query: 394      aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
                |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 11896273 aaaagggtctgaggttgaatcatattattttgatttcaatttattatttcaatgcaaaag 11896214

                                                    
Query: 454      gatgaaagaaatattgtctttccagaaagaaaaacc 489
                ||||||||||||||||||||||||||||||| ||||
Sbjct: 11896213 gatgaaagaaatattgtctttccagaaagaagaacc 11896178



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                            
Query: 526      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 14455950 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 14455891

                                                                            
Query: 586      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
                |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 14455890 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 14455831

                                                                            
Query: 646      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
                |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 14455830 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 14455771

                    
Query: 706      ctta 709
                ||||
Sbjct: 14455770 ctta 14455767



 Score =  238 bits (120), Expect = 2e-59
 Identities = 168/184 (91%)
 Strand = Plus / Minus

                                                                            
Query: 526      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
                ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||| |||
Sbjct: 11896139 tatatttctaaccgaagaaattgacttcgtatgggcattttgctagcagctatggaaata 11896080

                                                                            
Query: 586      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
                |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 11896079 gctgctctagctacagtttcggatactccgcccattttataaagtattcgacctggttta 11896020

                                                                            
Query: 646      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
                |||||||||||||||||||||||||| ||||||||||| |||||| ||||||| || |||
Sbjct: 11896019 acaacggctacccaatattcgggggatccctttcccgaacccatatgtgtttcggtcggt 11895960

                    
Query: 706      ctta 709
                ||||
Sbjct: 11895959 ctta 11895956



 Score =  172 bits (87), Expect = 1e-39
 Identities = 146/163 (89%), Gaps = 2/163 (1%)
 Strand = Plus / Plus

                                                                            
Query: 47       taatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcctcgg 106
                |||||||||| | |||| ||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 20862633 taatacttcatg-agcttatgaaactattttagtaaaattcaattctctcaattccttgg 20862691

                                                                            
Query: 107      caatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcag 166
                | || ||||||||||| | |||||| ||||| || ||||||| |||||| ||||||||||
Sbjct: 20862692 cgattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcag 20862750

                                                           
Query: 167      cattgtcatcatagcggattattataccgtcttcgcatttgaa 209
                ||||||  |||||||| ||||||||||||||||||||||||||
Sbjct: 20862751 cattgttgtcatagcgtattattataccgtcttcgcatttgaa 20862793



 Score =  153 bits (77), Expect = 9e-34
 Identities = 80/81 (98%)
 Strand = Plus / Minus

                                                                            
Query: 409      tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 468
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14456068 tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 14456009

                                     
Query: 469      gtctttccagaaagaaaaacc 489
                |||||||||||||||| ||||
Sbjct: 14456008 gtctttccagaaagaagaacc 14455988

---

>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1001_G09
          Length = 118018

 Score =  729 bits (368), Expect = 0.0
 Identities = 435/456 (95%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 78122 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 78064

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 78063 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 78004

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 78003 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 77944

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77943 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 77884

                                                                         
Query: 274   aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
             | | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 77883 actacgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgactacta 77824

                                                                         
Query: 334   gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
             |||||||||||||||||||||||||| ||||||||||||||| | || ||||||||||||
Sbjct: 77823 gcagctcctatgactcgaatacacattaattttcgagctccagtgttatctgctacattt 77764

                                                                         
Query: 394   aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 77763 aaaagggtctgaggttgaatcatattattttgatttcaatttattatttcaatgcaaaag 77704

                                                 
Query: 454   gatgaaagaaatattgtctttccagaaagaaaaacc 489
             ||||||||||||||||||||||||||||||| ||||
Sbjct: 77703 gatgaaagaaatattgtctttccagaaagaagaacc 77668



 Score =  238 bits (120), Expect = 2e-59
 Identities = 168/184 (91%)
 Strand = Plus / Minus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||| |||
Sbjct: 77629 tatatttctaaccgaagaaattgacttcgtatgggcattttgctagcagctatggaaata 77570

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 77569 gctgctctagctacagtttcggatactccgcccattttataaagtattcgacctggttta 77510

                                                                         
Query: 646   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
             |||||||||||||||||||||||||| ||||||||||| |||||| ||||||| || |||
Sbjct: 77509 acaacggctacccaatattcgggggatccctttcccgaacccatatgtgtttcggtcggt 77450

                 
Query: 706   ctta 709
             ||||
Sbjct: 77449 ctta 77446

---

>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0441A12
          Length = 185437

 Score =  729 bits (368), Expect = 0.0
 Identities = 435/456 (95%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                        
Query: 34   ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
            ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 1112 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 1054

                                                                        
Query: 94   ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
            |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 1053 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 994

                                                                        
Query: 154  attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
            || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 993  atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 934

                                                                        
Query: 214  ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933  ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 874

                                                                        
Query: 274  aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
            | | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 873  actacgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgactacta 814

                                                                        
Query: 334  gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
            |||||||||||||||||||||||||| ||||||||||||||| | || ||||||||||||
Sbjct: 813  gcagctcctatgactcgaatacacattaattttcgagctccagtgttatctgctacattt 754

                                                                        
Query: 394  aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 753  aaaagggtctgaggttgaatcatattattttgatttcaatttattatttcaatgcaaaag 694

                                                
Query: 454  gatgaaagaaatattgtctttccagaaagaaaaacc 489
            ||||||||||||||||||||||||||||||| ||||
Sbjct: 693  gatgaaagaaatattgtctttccagaaagaagaacc 658



 Score =  238 bits (120), Expect = 2e-59
 Identities = 168/184 (91%)
 Strand = Plus / Minus

                                                                       
Query: 526 tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
           ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||| |||
Sbjct: 619 tatatttctaaccgaagaaattgacttcgtatgggcattttgctagcagctatggaaata 560

                                                                       
Query: 586 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
           |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 559 gctgctctagctacagtttcggatactccgcccattttataaagtattcgacctggttta 500

                                                                       
Query: 646 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
           |||||||||||||||||||||||||| ||||||||||| |||||| ||||||| || |||
Sbjct: 499 acaacggctacccaatattcgggggatccctttcccgaacccatatgtgtttcggtcggt 440

               
Query: 706 ctta 709
           ||||
Sbjct: 439 ctta 436

---

>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12,
              complete sequence
          Length = 157069

 Score =  722 bits (364), Expect = 0.0
 Identities = 434/456 (95%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                          
Query: 34     ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
              ||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||
Sbjct: 146490 ctactagtatttataatacttcagg-agctaatgaaactagtttagtaaaattcaattct 146432

                                                                          
Query: 94     ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
              |||||||||||| | |||| ||||||||| |||||||||||||| || ||||||||||||
Sbjct: 146431 ctcaattcctcgacgatcgtgccaaaaacgcgagttccttttggatttcctttttgatca 146372

                                                                          
Query: 154    attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
              || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 146371 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 146312

                                                                          
Query: 214    ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
              ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 146311 ttacatgtacgtacaattacagctcgaattacttgagatctttctagaggcatttggggc 146252

                                                                          
Query: 274    aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
              | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 146251 actgcgtctttgattacagcaacaataacatcaccaatacgagcatattgctgattacta 146192

                                                                          
Query: 334    gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
              |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 146191 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 146132

                                                                          
Query: 394    aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146131 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 146072

                                                  
Query: 454    gatgaaagaaatattgtctttccagaaagaaaaacc 489
              ||||||||||||||||||||||||||||||| ||||
Sbjct: 146071 gatgaaagaaatattgtctttccagaaagaagaacc 146036



 Score =  246 bits (124), Expect = 8e-62
 Identities = 169/184 (91%)
 Strand = Plus / Minus

                                                                          
Query: 526    tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
              ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 145997 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 145938

                                                                          
Query: 586    gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
              ||||||||||||| |||||| |||||||  ||||||||||||||||| |||| |||||||
Sbjct: 145937 gctgctctagctatagtttcggatactctgcccatttcataaagtattcgacttggttta 145878

                                                                          
Query: 646    acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
              |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 145877 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttccgtcggt 145818

                  
Query: 706    ctta 709
              ||||
Sbjct: 145817 ctta 145814

---

>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11,
            complete sequence
          Length = 102567

 Score =  722 bits (364), Expect = 0.0
 Identities = 434/456 (95%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                        
Query: 34   ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
            ||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||
Sbjct: 5677 ctactagtatttataatacttcagg-agctaatgaaactagtttagtaaaattcaattct 5619

                                                                        
Query: 94   ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
            |||||||||||| | |||| ||||||||| |||||||||||||| || ||||||||||||
Sbjct: 5618 ctcaattcctcgacgatcgtgccaaaaacgcgagttccttttggatttcctttttgatca 5559

                                                                        
Query: 154  attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
            || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 5558 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 5499

                                                                        
Query: 214  ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
            ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 5498 ttacatgtacgtacaattacagctcgaattacttgagatctttctagaggcatttggggc 5439

                                                                        
Query: 274  aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
            | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 5438 actgcgtctttgattacagcaacaataacatcaccaatacgagcatattgctgattacta 5379

                                                                        
Query: 334  gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
            |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 5378 gcagctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 5319

                                                                        
Query: 394  aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5318 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 5259

                                                
Query: 454  gatgaaagaaatattgtctttccagaaagaaaaacc 489
            ||||||||||||||||||||||||||||||| ||||
Sbjct: 5258 gatgaaagaaatattgtctttccagaaagaagaacc 5223



 Score =  246 bits (124), Expect = 8e-62
 Identities = 169/184 (91%)
 Strand = Plus / Minus

                                                                        
Query: 526  tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
            ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 5184 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 5125

                                                                        
Query: 586  gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
            ||||||||||||| |||||| |||||||  ||||||||||||||||| |||| |||||||
Sbjct: 5124 gctgctctagctatagtttcggatactctgcccatttcataaagtattcgacttggttta 5065

                                                                        
Query: 646  acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
            |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 5064 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttccgtcggt 5005

                
Query: 706  ctta 709
            ||||
Sbjct: 5004 ctta 5001

---

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  722 bits (364), Expect = 0.0
 Identities = 434/456 (95%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||
Sbjct: 79028 ctactagtatttataatacttcagg-agctaatgaaactattttagtcaaattcaattct 79086

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             || ||||| ||||||| ||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 79087 cttaattcttcggcaaccgcgccaaaaactcgagttccttttggatttcctttttgatca 79146

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || ||||| || ||||||||||||||||| |||||||||||||| |||| ||||||||||
Sbjct: 79147 atgataactgctgcattgtcatcatagcgtattattataccgtcgtcgcctttgaattct 79206

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
             |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79207 ttacgtgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 79266

                                                                         
Query: 274   aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
             | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 79267 actgcgtctttgattacagcaataataacatcaccaatacgagcatatcgctgattacca 79326

                                                                         
Query: 334   gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
             || ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 79327 gcggctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 79386

                                                                         
Query: 394   aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
             |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 79387 aaaagggtctgaggttgaatcatattatttggatttccatttgttatttcaatgcaaaag 79446

                                                 
Query: 454   gatgaaagaaatattgtctttccagaaagaaaaacc 489
             ||||||||||||||||||||||||||||||||||||
Sbjct: 79447 gatgaaagaaatattgtctttccagaaagaaaaacc 79482



 Score =  307 bits (155), Expect = 3e-80
 Identities = 185/195 (94%)
 Strand = Plus / Plus

                                                                         
Query: 515   ttttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggccg 574
             |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 79509 ttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggcag 79568

                                                                         
Query: 575   ctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtatac 634
             |||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||| |
Sbjct: 79569 ctatagagatagctgctctagctacagtttcggatactccgctcatttcataaagtattc 79628

                                                                         
Query: 635   gacctggtttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtg 694
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 79629 gacctggtttaacaacggctacccaatattcgggggatccctttcccgagcccatacgtg 79688

                            
Query: 695   tttccgtgggtctta 709
             |||| ||||||||||
Sbjct: 79689 tttctgtgggtctta 79703

---

>emb|X06734.1|CHZMRP14 Maize chloroplast genes for ribosomal proteins L14, S8 and L16
           partial
          Length = 1287

 Score =  722 bits (364), Expect = 0.0
 Identities = 434/456 (95%), Gaps = 1/456 (0%)
 Strand = Plus / Minus

                                                                       
Query: 34  ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
           ||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||
Sbjct: 641 ctactagtatttataatacttcagg-agctaatgaaactattttagtcaaattcaattct 583

                                                                       
Query: 94  ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
           || ||||| ||||||| ||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 582 cttaattcttcggcaaccgcgccaaaaactcgagttccttttggatttcctttttgatca 523

                                                                       
Query: 154 attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
           || ||||| || ||||||||||||||||| |||||||||||||| |||| ||||||||||
Sbjct: 522 atgataactgctgcattgtcatcatagcgtattattataccgtcgtcgcctttgaattct 463

                                                                       
Query: 214 ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ttacgtgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 403

                                                                       
Query: 274 aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
           | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 402 actgcgtctttgattacagcaataataacatcaccaatacgagcatatcgctgattacca 343

                                                                       
Query: 334 gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
           || ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 342 gcggctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 283

                                                                       
Query: 394 aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
           |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 282 aaaagggtctgaggttgaatcatattatttggatttccatttgttatttcaatgcaaaag 223

                                               
Query: 454 gatgaaagaaatattgtctttccagaaagaaaaacc 489
           ||||||||||||||||||||||||||||||||||||
Sbjct: 222 gatgaaagaaatattgtctttccagaaagaaaaacc 187



 Score =  248 bits (125), Expect = 2e-62
 Identities = 149/157 (94%)
 Strand = Plus / Minus

                                                                       
Query: 515 ttttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggccg 574
           |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 160 ttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggcag 101

                                                                       
Query: 575 ctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtatac 634
           |||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||| |
Sbjct: 100 ctatagagatagctgctctagctacagtttcggatactccgctcatttcataaagtattc 41

                                                
Query: 635 gacctggtttaacaacggctacccaatattcggggga 671
           |||||||||||||||||||||||||||||||||||||
Sbjct: 40  gacctggtttaacaacggctacccaatattcggggga 4

---

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  722 bits (364), Expect = 0.0
 Identities = 434/456 (95%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||
Sbjct: 79044 ctactagtatttataatacttcagg-agctaatgaaactattttagtcaaattcaattct 79102

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             || ||||| ||||||| ||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 79103 cttaattcttcggcaaccgcgccaaaaactcgagttccttttggatttcctttttgatca 79162

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || ||||| || ||||||||||||||||| |||||||||||||| |||| ||||||||||
Sbjct: 79163 atgataactgctgcattgtcatcatagcgtattattataccgtcgtcgcctttgaattct 79222

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
             |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79223 ttacgtgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 79282

                                                                         
Query: 274   aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
             | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 79283 actgcgtctttgattacagcaataataacatcaccaatacgagcatatcgctgattacca 79342

                                                                         
Query: 334   gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
             || ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 79343 gcggctcctatgactcgaatacacatcaattttcgagctccactgttatctgctacattt 79402

                                                                         
Query: 394   aaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgcaaaag 453
             |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 79403 aaaagggtctgaggttgaatcatattatttggatttccatttgttatttcaatgcaaaag 79462

                                                 
Query: 454   gatgaaagaaatattgtctttccagaaagaaaaacc 489
             ||||||||||||||||||||||||||||||||||||
Sbjct: 79463 gatgaaagaaatattgtctttccagaaagaaaaacc 79498



 Score =  307 bits (155), Expect = 3e-80
 Identities = 185/195 (94%)
 Strand = Plus / Plus

                                                                         
Query: 515   ttttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggccg 574
             |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 79525 ttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggcag 79584

                                                                         
Query: 575   ctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtatac 634
             |||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||| |
Sbjct: 79585 ctatagagatagctgctctagctacagtttcggatactccgctcatttcataaagtattc 79644

                                                                         
Query: 635   gacctggtttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtg 694
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 79645 gacctggtttaacaacggctacccaatattcgggggatccctttcccgagcccatacgtg 79704

                            
Query: 695   tttccgtgggtctta 709
             |||| ||||||||||
Sbjct: 79705 tttctgtgggtctta 79719

---

>ref|NM_190859.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 372

 Score =  605 bits (305), Expect = e-170
 Identities = 357/373 (95%), Gaps = 1/373 (0%)
 Strand = Plus / Minus

                                                                       
Query: 44  ttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcct 103
           ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 372 ttataatacttcagg-agctaatgaaactattttagtaaaattcaattctctcaattcct 314

                                                                       
Query: 104 cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 163
           |||| |||||||||||||| |||||||||||||| || |||||||||||||| |||||||
Sbjct: 313 cggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatcaatgataaccg 254

                                                                       
Query: 164 cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 223
           | |||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 253 ctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttacatgtac 194

                                                                       
Query: 224 gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 283
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 193 gtacaattacagctcgaattacttcggatctttctagaggcatttggggcactgcatctt 134

                                                                       
Query: 284 tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 343
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 133 tgattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagctccta 74

                                                                       
Query: 344 tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 403
           |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 73  tgactcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtct 14

                        
Query: 404 gaggttgaatcat 416
           |||||||||||||
Sbjct: 13  gaggttgaatcat 1

---

>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete
             sequence
          Length = 141691

 Score =  539 bits (272), Expect = e-150
 Identities = 296/304 (97%)
 Strand = Plus / Plus

                                                                         
Query: 178   tagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagct 237
             ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 14317 tagcgtattattataccgtcttcgcatttgaactctttacatgtacgtacaattacagct 14376

                                                                         
Query: 238   cgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaaca 297
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 14377 cgaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaaca 14436

                                                                         
Query: 298   ataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacac 357
             |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 14437 ataacatcaccaatacgagcatatcgctgattactagcagctcttatgactcgaatacac 14496

                                                                         
Query: 358   atcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcata 417
             |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 14497 atcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcata 14556

                                                                         
Query: 418   ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttcca 477
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 14557 ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtttttcca 14616

                 
Query: 478   gaaa 481
             ||||
Sbjct: 14617 gaaa 14620



 Score =  246 bits (124), Expect = 8e-62
 Identities = 169/184 (91%)
 Strand = Plus / Plus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| |||| ||||||||||| |||||||||||| ||||| |||||||| |||
Sbjct: 14667 tatatttctaaccgaagaaattgacttcatatgggcattttgctggcagctatggaaata 14726

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             |||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||
Sbjct: 14727 gctgctctagctacagtttcggatactccgcccatttcataaagtattctacctggttta 14786

                                                                         
Query: 646   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
             |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 14787 acaatggctacccaatattcgggggatccctttcccgaacccatacgtgtttccgttggt 14846

                 
Query: 706   ctta 709
             ||||
Sbjct: 14847 ctta 14850



 Score =  186 bits (94), Expect = 7e-44
 Identities = 135/146 (92%), Gaps = 2/146 (1%)
 Strand = Plus / Plus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 13995 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 14053

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||| ||||
Sbjct: 14054 ctcaattcctaggcgatcgcgccaaaaacgcgagttccttttggatttccttttt-atca 14112

                                       
Query: 154   attataaccgcagcattgtcatcata 179
             || |||||||| |||||||| |||||
Sbjct: 14113 atgataaccgctgcattgtcgtcata 14138

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  539 bits (272), Expect = e-150
 Identities = 296/304 (97%)
 Strand = Plus / Plus

                                                                            
Query: 178      tagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagct 237
                ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 24638131 tagcgtattattataccgtcttcgcatttgaactctttacatgtacgtacaattacagct 24638190

                                                                            
Query: 238      cgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaaca 297
                ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 24638191 cgaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaaca 24638250

                                                                            
Query: 298      ataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacac 357
                |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 24638251 ataacatcaccaatacgagcatatcgctgattactagcagctcttatgactcgaatacac 24638310

                                                                            
Query: 358      atcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcata 417
                |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 24638311 atcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcata 24638370

                                                                            
Query: 418      ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttcca 477
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 24638371 ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtttttcca 24638430

                    
Query: 478      gaaa 481
                ||||
Sbjct: 24638431 gaaa 24638434



 Score =  462 bits (233), Expect = e-127
 Identities = 269/281 (95%)
 Strand = Plus / Plus

                                                                            
Query: 168      attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 227
                |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32000439 attgtcgttatagcgtattattataccgtcttcgcatttgaattctttacatgtacgtac 32000498

                                                                            
Query: 228      aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 287
                ||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 32000499 aattatagctcgaattacttcggatctttctagaggcatttaggacactgcgtctttgat 32000558

                                                                            
Query: 288      tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 347
                |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 32000559 tacagcaataataacatcaccaatacgagcatatcgctgattactagcagctcctatgac 32000618

                                                                            
Query: 348      tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 407
                |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 32000619 tcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctgagg 32000678

                                                         
Query: 408      ttgaatcatattattttgatttcaatttgttatttcaatgc 448
                |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 32000679 ttgaatcatattattttgattttaatttgttatttcaatgc 32000719



 Score =  246 bits (124), Expect = 8e-62
 Identities = 169/184 (91%)
 Strand = Plus / Plus

                                                                            
Query: 526      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
                ||||| ||||| |||| ||||||||||| |||||||||||| ||||| |||||||| |||
Sbjct: 24638481 tatatttctaaccgaagaaattgacttcatatgggcattttgctggcagctatggaaata 24638540

                                                                            
Query: 586      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
                |||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||
Sbjct: 24638541 gctgctctagctacagtttcggatactccgcccatttcataaagtattctacctggttta 24638600

                                                                            
Query: 646      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
                |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 24638601 acaatggctacccaatattcgggggatccctttcccgaacccatacgtgtttccgttggt 24638660

                    
Query: 706      ctta 709
                ||||
Sbjct: 24638661 ctta 24638664



 Score =  186 bits (94), Expect = 7e-44
 Identities = 135/146 (92%), Gaps = 2/146 (1%)
 Strand = Plus / Plus

                                                                            
Query: 34       ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
                ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 24637809 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 24637867

                                                                            
Query: 94       ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
                |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||| ||||
Sbjct: 24637868 ctcaattcctaggcgatcgcgccaaaaacgcgagttccttttggatttccttttt-atca 24637926

                                          
Query: 154      attataaccgcagcattgtcatcata 179
                || |||||||| |||||||| |||||
Sbjct: 24637927 atgataaccgctgcattgtcgtcata 24637952



 Score =  149 bits (75), Expect = 1e-32
 Identities = 143/163 (87%), Gaps = 2/163 (1%)
 Strand = Plus / Plus

                                                                            
Query: 47       taatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcctcgg 106
                |||||||||| | |||| ||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 27557409 taatacttcatg-agcttatgaaactattttagtaaaattcaattctctcaattccttgg 27557467

                                                                            
Query: 107      caatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcag 166
                | || || |||||||| | |||||| ||||| || ||||||| |||||| ||||||| ||
Sbjct: 27557468 cgattgcaccaaaaacgcaagttccatttggatttccttttt-atcaatgataaccgtag 27557526

                                                           
Query: 167      cattgtcatcatagcggattattataccgtcttcgcatttgaa 209
                || |||| |||||||| |||||||||| |||||||||||||||
Sbjct: 27557527 cactgtcgtcatagcgtattattatactgtcttcgcatttgaa 27557569

---

>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from
             chromosome 3 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 136470

 Score =  539 bits (272), Expect = e-150
 Identities = 296/304 (97%)
 Strand = Plus / Plus

                                                                         
Query: 178   tagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagct 237
             ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 70177 tagcgtattattataccgtcttcgcatttgaactctttacatgtacgtacaattacagct 70236

                                                                         
Query: 238   cgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaaca 297
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 70237 cgaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaaca 70296

                                                                         
Query: 298   ataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacac 357
             |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 70297 ataacatcaccaatacgagcatatcgctgattactagcagctcttatgactcgaatacac 70356

                                                                         
Query: 358   atcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcata 417
             |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 70357 atcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcata 70416

                                                                         
Query: 418   ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttcca 477
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 70417 ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtttttcca 70476

                 
Query: 478   gaaa 481
             ||||
Sbjct: 70477 gaaa 70480



 Score =  246 bits (124), Expect = 8e-62
 Identities = 169/184 (91%)
 Strand = Plus / Plus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| |||| ||||||||||| |||||||||||| ||||| |||||||| |||
Sbjct: 70527 tatatttctaaccgaagaaattgacttcatatgggcattttgctggcagctatggaaata 70586

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             |||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||
Sbjct: 70587 gctgctctagctacagtttcggatactccgcccatttcataaagtattctacctggttta 70646

                                                                         
Query: 646   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
             |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 70647 acaatggctacccaatattcgggggatccctttcccgaacccatacgtgtttccgttggt 70706

                 
Query: 706   ctta 709
             ||||
Sbjct: 70707 ctta 70710



 Score =  186 bits (94), Expect = 7e-44
 Identities = 135/146 (92%), Gaps = 2/146 (1%)
 Strand = Plus / Plus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 69855 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 69913

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||| ||||
Sbjct: 69914 ctcaattcctaggcgatcgcgccaaaaacgcgagttccttttggatttccttttt-atca 69972

                                       
Query: 154   attataaccgcagcattgtcatcata 179
             || |||||||| |||||||| |||||
Sbjct: 69973 atgataaccgctgcattgtcgtcata 69998

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  539 bits (272), Expect = e-150
 Identities = 296/304 (97%)
 Strand = Plus / Plus

                                                                            
Query: 178      tagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagct 237
                ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 24555600 tagcgtattattataccgtcttcgcatttgaactctttacatgtacgtacaattacagct 24555659

                                                                            
Query: 238      cgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaaca 297
                ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 24555660 cgaattacttcggatctttctagaggcatttggggcactgcgtctttgattacagcaaca 24555719

                                                                            
Query: 298      ataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacac 357
                |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 24555720 ataacatcaccaatacgagcatatcgctgattactagcagctcttatgactcgaatacac 24555779

                                                                            
Query: 358      atcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcata 417
                |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 24555780 atcaattttcgagctccactgttatctgctacatttaaaagggtctgaggttgaatcata 24555839

                                                                            
Query: 418      ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttcca 477
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 24555840 ttattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtttttcca 24555899

                    
Query: 478      gaaa 481
                ||||
Sbjct: 24555900 gaaa 24555903



 Score =  462 bits (233), Expect = e-127
 Identities = 269/281 (95%)
 Strand = Plus / Plus

                                                                            
Query: 168      attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 227
                |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32090951 attgtcgttatagcgtattattataccgtcttcgcatttgaattctttacatgtacgtac 32091010

                                                                            
Query: 228      aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 287
                ||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 32091011 aattatagctcgaattacttcggatctttctagaggcatttaggacactgcgtctttgat 32091070

                                                                            
Query: 288      tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 347
                |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 32091071 tacagcaataataacatcaccaatacgagcatatcgctgattactagcagctcctatgac 32091130

                                                                            
Query: 348      tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 407
                |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 32091131 tcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctgagg 32091190

                                                         
Query: 408      ttgaatcatattattttgatttcaatttgttatttcaatgc 448
                |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 32091191 ttgaatcatattattttgattttaatttgttatttcaatgc 32091231



 Score =  246 bits (124), Expect = 8e-62
 Identities = 169/184 (91%)
 Strand = Plus / Plus

                                                                            
Query: 526      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
                ||||| ||||| |||| ||||||||||| |||||||||||| ||||| |||||||| |||
Sbjct: 24555950 tatatttctaaccgaagaaattgacttcatatgggcattttgctggcagctatggaaata 24556009

                                                                            
Query: 586      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
                |||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||
Sbjct: 24556010 gctgctctagctacagtttcggatactccgcccatttcataaagtattctacctggttta 24556069

                                                                            
Query: 646      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
                |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 24556070 acaatggctacccaatattcgggggatccctttcccgaacccatacgtgtttccgttggt 24556129

                    
Query: 706      ctta 709
                ||||
Sbjct: 24556130 ctta 24556133



 Score =  186 bits (94), Expect = 7e-44
 Identities = 135/146 (92%), Gaps = 2/146 (1%)
 Strand = Plus / Plus

                                                                            
Query: 34       ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
                ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 24555278 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 24555336

                                                                            
Query: 94       ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
                |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||| ||||
Sbjct: 24555337 ctcaattcctaggcgatcgcgccaaaaacgcgagttccttttggatttccttttt-atca 24555395

                                          
Query: 154      attataaccgcagcattgtcatcata 179
                || |||||||| |||||||| |||||
Sbjct: 24555396 atgataaccgctgcattgtcgtcata 24555421



 Score =  149 bits (75), Expect = 1e-32
 Identities = 143/163 (87%), Gaps = 2/163 (1%)
 Strand = Plus / Plus

                                                                            
Query: 47       taatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcctcgg 106
                |||||||||| | |||| ||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 27648732 taatacttcatg-agcttatgaaactattttagtaaaattcaattctctcaattccttgg 27648790

                                                                            
Query: 107      caatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcag 166
                | || || |||||||| | |||||| ||||| || ||||||| |||||| ||||||| ||
Sbjct: 27648791 cgattgcaccaaaaacgcaagttccatttggatttccttttt-atcaatgataaccgtag 27648849

                                                           
Query: 167      cattgtcatcatagcggattattataccgtcttcgcatttgaa 209
                || |||| |||||||| |||||||||| |||||||||||||||
Sbjct: 27648850 cactgtcgtcatagcgtattattatactgtcttcgcatttgaa 27648892

---

>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete
             sequence
          Length = 144306

 Score =  462 bits (233), Expect = e-127
 Identities = 269/281 (95%)
 Strand = Plus / Plus

                                                                         
Query: 168   attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 227
             |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92391 attgtcgttatagcgtattattataccgtcttcgcatttgaattctttacatgtacgtac 92450

                                                                         
Query: 228   aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 287
             ||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 92451 aattatagctcgaattacttcggatctttctagaggcatttaggacactgcgtctttgat 92510

                                                                         
Query: 288   tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 347
             |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 92511 tacagcaataataacatcaccaatacgagcatatcgctgattactagcagctcctatgac 92570

                                                                         
Query: 348   tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 407
             |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 92571 tcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctgagg 92630

                                                      
Query: 408   ttgaatcatattattttgatttcaatttgttatttcaatgc 448
             |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 92631 ttgaatcatattattttgattttaatttgttatttcaatgc 92671

---

>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence,
            complete sequence
          Length = 178158

 Score =  462 bits (233), Expect = e-127
 Identities = 269/281 (95%)
 Strand = Plus / Plus

                                                                        
Query: 168  attgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtac 227
            |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 attgtcgttatagcgtattattataccgtcttcgcatttgaattctttacatgtacgtac 1623

                                                                        
Query: 228  aattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgat 287
            ||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 1624 aattatagctcgaattacttcggatctttctagaggcatttaggacactgcgtctttgat 1683

                                                                        
Query: 288  tacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgac 347
            |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1684 tacagcaataataacatcaccaatacgagcatatcgctgattactagcagctcctatgac 1743

                                                                        
Query: 348  tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 407
            |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 1744 tcgaatacacatcaattttcgagctccactgttatctgctacatttaaaagggtctgagg 1803

                                                     
Query: 408  ttgaatcatattattttgatttcaatttgttatttcaatgc 448
            |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1804 ttgaatcatattattttgattttaatttgttatttcaatgc 1844

---

>gb|DQ069425.1| Typha latifolia ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score =  389 bits (196), Expect = e-105
 Identities = 325/366 (88%), Gaps = 4/366 (1%)
 Strand = Plus / Minus

                                                                       
Query: 51  acttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcctcggcaat 110
           |||||||| |||||||||||||||||| ||||||||||| | ||||||||||   || ||
Sbjct: 362 acttcagg-agctaatgaaactattttagtaaaattcaactgtctcaattcccgagcgat 304

                                                                       
Query: 111 cgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcatt 170
           ||| ||||||||||||||||||||||| || |||| ||||||||| | ||| ||||||||
Sbjct: 303 cgcaccaaaaactcgagttccttttggatttccttcttgatcaatgacaactgcagcatt 244

                                                                       
Query: 171 gtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaat 230
           ||||||||| || ||||| ||||||| ||| | ||||| |||||||||||||||||||||
Sbjct: 243 gtcatcatatcgtattatgataccgttttcacgtttgagttctttacatgtacgtacaat 184

                                                                       
Query: 231 tacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttgattac 290
           |||||||| ||||||||| ||||||||||||||||| | ||| | ||| |||||||||||
Sbjct: 183 tacagctctaattacttctgatctttctagaggcatattgggaactgcttctttgattac 124

                                                                       
Query: 291 agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 350
           |||||||||||||||||||||| |||||||||| |||||||   |||||||||||| |||
Sbjct: 123 agcaacaataacatcaccaatatgagcatatcggtgattac---cagctcctatgattcg 67

                                                                       
Query: 351 aatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttg 410
           ||||||||| |||||||||||||| || || || |||||||| |||||||||||||||||
Sbjct: 66  aatacacattaattttcgagctccgctgttatccgctacattcaaaagggtctgaggttg 7

                 
Query: 411 aatcat 416
           ||||||
Sbjct: 6   aatcat 1

---

>gb|DQ069426.1| Yucca schidigera ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score =  379 bits (191), Expect = e-102
 Identities = 316/357 (88%), Gaps = 3/357 (0%)
 Strand = Plus / Minus

                                                                       
Query: 60  agctaatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaa 119
           |||||||||||||||||| ||||||||||| | ||||||||||   |||||||| |||||
Sbjct: 354 agctaatgaaactattttagtaaaattcaactgtctcaattcccgagcaatcgccccaaa 295

                                                                       
Query: 120 aactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcata 179
           || |||||||||||||||||| |||| ||||||||| | |||||| ||||||||||||||
Sbjct: 294 aattcgagttccttttgggtttccttcttgatcaatgacaaccgctgcattgtcatcata 235

                                                                       
Query: 180 gcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctcg 239
            || ||||| |||||||  || | ||||| ||||||||||||||||||||||||||||| 
Sbjct: 234 tcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattacagctct 175

                                                                       
Query: 240 aattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaat 299
           ||||||||| ||||||||||||||||| | ||||| ||| ||||||||||||||||||||
Sbjct: 174 aattacttctgatctttctagaggcatattgggcactgcttctttgattacagcaacaat 115

                                                                       
Query: 300 aacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacacat 359
           ||| ||||||||| |||||||||| |||||||   |||| ||||||| ||||||||||||
Sbjct: 114 aacgtcaccaatatgagcatatcggtgattac---cagcccctatgattcgaatacacat 58

                                                                    
Query: 360 caattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcat 416
           ||||| ||||||||| || || ||||||||||| |||||||| ||||||||||||||
Sbjct: 57  caattctcgagctccgctgttatctgctacattcaaaagggtttgaggttgaatcat 1

---

>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0059G01, complete sequence
          Length = 141661

 Score =  351 bits (177), Expect = 2e-93
 Identities = 195/201 (97%)
 Strand = Plus / Minus

                                                                         
Query: 159   aaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttaca 218
             |||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 23399 aaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttaca 23340

                                                                         
Query: 219   tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgc 278
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 23339 tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcactgc 23280

                                                                         
Query: 279   gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagc 338
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 23279 gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagc 23220

                                  
Query: 339   tcctatgactcgaatacacat 359
             |||||||||||||||||||||
Sbjct: 23219 tcctatgactcgaatacacat 23199



 Score =  174 bits (88), Expect = 3e-40
 Identities = 235/280 (83%), Gaps = 3/280 (1%)
 Strand = Plus / Plus

                                                                         
Query: 64    aatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaact 123
             ||||||| ||||||  || |||||||||||||||||||| |||| |||  ||||||||| 
Sbjct: 96297 aatgaaattattttaatacaattcaattctctcaattcc-cggcgatcatgccaaaaacg 96355

                                                                         
Query: 124   cgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcgg 183
              |||| || ||||| || | ||||||||| || |||||||  | ||  ||  ||||||| 
Sbjct: 96356 tgagtgccctttggatttcttttttgatcgatgataaccgttgtata-tcggcatagcgt 96414

                                                                         
Query: 184   attattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctcgaatt 243
             |||||||||| || ||| |||||||| ||||||||||||| || ||||||  ||| ||||
Sbjct: 96415 attattatactgt-ttcacatttgaactctttacatgtacatataattacttctctaatt 96473

                                                                         
Query: 244   acttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaataaca 303
             |||| || ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||
Sbjct: 96474 actttgggtctttctagaggcatttggggcactgcatctttcattacagcaacaataaca 96533

                                                     
Query: 304   tcaccaatacgagcatatcgctgattaccagcagctccta 343
             ||| ||||| |||||||| | ||||||| |||||| ||||
Sbjct: 96534 tcatcaatatgagcatattgttgattactagcagcaccta 96573



 Score =  107 bits (54), Expect = 5e-20
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                         
Query: 386   ctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaa 445
             |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 96608 ctacatttaaaagggtttgaggttgaatcatattattttgatgtcaatttgttatttcaa 96667

               
Query: 446   tg 447
             ||
Sbjct: 96668 tg 96669

---

>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16,
              complete sequence
          Length = 159525

 Score =  351 bits (177), Expect = 2e-93
 Identities = 195/201 (97%)
 Strand = Plus / Minus

                                                                          
Query: 159    aaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttaca 218
              |||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 130171 aaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactctttaca 130112

                                                                          
Query: 219    tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgc 278
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 130111 tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcactgc 130052

                                                                          
Query: 279    gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagc 338
              ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 130051 gtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattactagcagc 129992

                                   
Query: 339    tcctatgactcgaatacacat 359
              |||||||||||||||||||||
Sbjct: 129991 tcctatgactcgaatacacat 129971

---

>emb|AL731738.6|CNS08C7N Oryza sativa chromosome 12, . BAC OSJNBa0005K20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 143618

 Score =  349 bits (176), Expect = 8e-93
 Identities = 213/224 (95%), Gaps = 1/224 (0%)
 Strand = Plus / Minus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 79020 ctactagtatttataatacttcagg-agctaatgaaactattttagtaaaattcaattct 78962

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 78961 ctcaattcctcggcgatcgcgccaaaaacgcgagttccttttggatttcctttttgatca 78902

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || |||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 78901 atgataaccgctgcattgtcgtcatagcgtattattataccgtcttcgcatttgaactct 78842

                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttc 257
             ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78841 ttacatgtacgtacaattacagctcgaattacttcggatctttc 78798

---

>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score =  337 bits (170), Expect = 3e-89
 Identities = 337/391 (86%), Gaps = 4/391 (1%)
 Strand = Plus / Plus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             |||||||||||||||| ||||||||  |||||||| |||||||| || ||||| || | |
Sbjct: 81909 ctactagtatttataagacttcaggg-gctaatgagactattttagtgaaatttaacttt 81967

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||   |||||||| ||||||||||||||||||||||| || |||| |||||||
Sbjct: 81968 ctcaattcccgagcaatcgctccaaaaactcgagttccttttggatttccttcttgatca 82027

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || | ||| || |||||||||||||| || ||||| |||||||  |||| ||||| ||||
Sbjct: 82028 atgacaactgccgcattgtcatcatatcgtattatcataccgttgtcgcgtttgagttct 82087

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggc 273
             ||||||||||||||||||||||||||||| ||||| |||||||| |||||||| | ||||
Sbjct: 82088 ttacatgtacgtacaattacagctcgaataacttctgatctttcgagaggcatattgggc 82147

                                                                         
Query: 274   aatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgattacca 333
             | ||| ||||||||||||||||||||||| ||||| ||| ||||||||||  ||||||  
Sbjct: 82148 actgcttctttgattacagcaacaataacgtcaccgatatgagcatatcggcgattac-- 82205

                                                                         
Query: 334   gcagctcctatgactcgaatacacatcaattttcgagctccactattgtctgctacattt 393
               ||| ||||||| |||||| |||||||||| |||||| || || ||||| |||||||| 
Sbjct: 82206 -tagcccctatgattcgaatgcacatcaattctcgagccccgctgttgtccgctacattc 82264

                                            
Query: 394   aaaagggtctgaggttgaatcatattatttt 424
             ||| ||||||||||||||||||||| |||||
Sbjct: 82265 aaatgggtctgaggttgaatcatatcatttt 82295



 Score =  163 bits (82), Expect = 1e-36
 Identities = 145/166 (87%)
 Strand = Plus / Plus

                                                                         
Query: 544   aattgacttcgtatgggcattttactggccgctatggagatagctgctctagctacagtt 603
             |||||| ||||||| |||||||| |  || ||||| || ||||| ||||| |||||||||
Sbjct: 82437 aattgagttcgtataggcattttgcacgcagctattgaaatagccgctctggctacagtt 82496

                                                                         
Query: 604   tcagatactccccccatttcataaagtatacgacctggtttaacaacggctacccaatat 663
             || |||||||| ||||||||||||||||| |||||||||||||| || | ||||||||||
Sbjct: 82497 tcggatactccgcccatttcataaagtattcgacctggtttaacgacagatacccaatat 82556

                                                           
Query: 664   tcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 709
             |||||||| || || ||||| ||||||||||||||||| |||||||
Sbjct: 82557 tcgggggatcctttccccgaacccatacgtgtttccgtaggtctta 82602

---

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score =  317 bits (160), Expect = 3e-83
 Identities = 332/386 (86%), Gaps = 5/386 (1%)
 Strand = Plus / Plus

                                                                         
Query: 61    gctaatgaaactattttggtaaaattcaattctctcaattcctcg-gcaatcgcgccaaa 119
             ||||||||||| ||||| ||||||||||| | || |||||| ||| ||||| || |||||
Sbjct: 82598 gctaatgaaacgattttagtaaaattcaactgtcgcaattc-tcgagcaattgcaccaaa 82656

                                                                         
Query: 120   aactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcata 179
             || ||||||||||||||| || |||| ||||||||| |||||||| ||||||||||||||
Sbjct: 82657 aattcgagttccttttggatttccttcttgatcaatgataaccgctgcattgtcatcata 82716

                                                                         
Query: 180   gcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctcg 239
              || ||||| || ||||  || | ||||| |||||||||||| |||||||| ||||||| 
Sbjct: 82717 tcgtattatcatgccgttgtcacgtttgagttctttacatgtgcgtacaatcacagctct 82776

                                                                         
Query: 240   aattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaat 299
             ||||| ||| ||||||||||||||||| | ||||| ||| ||||||||||||||||||||
Sbjct: 82777 aattatttctgatctttctagaggcatgttgggcactgcttctttgattacagcaacaat 82836

                                                                         
Query: 300   aacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacacat 359
             |||||| |||| | |||||||||| |||||||   ||| |||||||| ||||||||||||
Sbjct: 82837 aacatcgccaagatgagcatatcggtgattac---cagttcctatgattcgaatacacat 82893

                                                                         
Query: 360   caattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcatatt 419
              |||||| |||||||||| || || |||||||| ||||||||||||||||||||||||| 
Sbjct: 82894 taatttttgagctccactgttatccgctacattcaaaagggtctgaggttgaatcatatc 82953

                                       
Query: 420   attttgatttcaatttgttatttcaa 445
             ||||| | || ||| | |||||||||
Sbjct: 82954 atttttaatttaatctcttatttcaa 82979



 Score =  109 bits (55), Expect = 1e-20
 Identities = 100/115 (86%)
 Strand = Plus / Plus

                                                                         
Query: 595   gctacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacggct 654
             ||||||| |||||||||||| | ||||||||||| ||| || || ||||||||||||| |
Sbjct: 83144 gctacagcttcagatactccactcatttcataaattattcggcccggtttaacaacggat 83203

                                                                    
Query: 655   acccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 709
             ||||||||||||||||| || || || || |||||||||||||| || |||||||
Sbjct: 83204 acccaatattcgggggatcctttgccggaacccatacgtgtttctgtaggtctta 83258

---

>gb|M15176.1|MZECPPG Zea mays chloroplast Eco x DNA
          Length = 1368

 Score =  307 bits (155), Expect = 3e-80
 Identities = 185/195 (94%)
 Strand = Plus / Minus

                                                                        
Query: 515  ttttagggttctatatctctaatcgaataaattgacttcgtatgggcattttactggccg 574
            |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 1068 ttttggggttctatatctctaatcgaagaaattgacttcgtatgggcattttactggcag 1009

                                                                        
Query: 575  ctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtatac 634
            |||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||| |
Sbjct: 1008 ctatagagatagctgctctagctacagtttcggatactccgctcatttcataaagtattc 949

                                                                        
Query: 635  gacctggtttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtg 694
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 948  gacctggtttaacaacggctacccaatattcgggggatccctttcccgagcccatacgtg 889

                           
Query: 695  tttccgtgggtctta 709
            |||| ||||||||||
Sbjct: 888  tttctgtgggtctta 874



 Score =  194 bits (98), Expect = 3e-46
 Identities = 104/106 (98%)
 Strand = Plus / Minus

                                                                        
Query: 219  tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgc 278
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1365 tgtacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcactgc 1306

                                                          
Query: 279  gtctttgattacagcaacaataacatcaccaatacgagcatatcgc 324
            ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1305 gtctttgattacagcaataataacatcaccaatacgagcatatcgc 1260



 Score =  161 bits (81), Expect = 4e-36
 Identities = 101/105 (96%), Gaps = 2/105 (1%)
 Strand = Plus / Minus

                                                                        
Query: 385  gctacatttaaaagggtctgaggttgaatcatattattttgatttcaatttgttatttca 444
            ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||
Sbjct: 1199 gctacatttaaaagggtctgaggttgaatcatattatttgg-tttccatttgttatttca 1141

                                                         
Query: 445  a-tgcaaaaggatgaaagaaatattgtctttccagaaagaaaaac 488
            | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 aatgcaaaaggatgaaagaaatattgtctttccagaaagaaaaac 1096



 Score =  107 bits (54), Expect = 5e-20
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                        
Query: 263  gcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcatatc 322
            |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1261 gcatttggggcactgcgtctttgattacagcaataataacatcaccaatacgagcatatc 1202

              
Query: 323  gc 324
            ||
Sbjct: 1201 gc 1200

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  305 bits (154), Expect = 1e-79
 Identities = 184/194 (94%)
 Strand = Plus / Minus

                                                                            
Query: 296      caataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatac 355
                |||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 24916826 caattacatcaccaatacgagcatatcgctgattactagcagctcctatgacttgaatac 24916767

                                                                            
Query: 356      acatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatca 415
                |||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||| |
Sbjct: 24916766 acattaattttcgagctccactattatctgctacatttaaaagggtctgaggttaaatta 24916707

                                                                            
Query: 416      tattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttc 475
                ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 24916706 tattattttgatttcaatttgctatttcaatgcaaaaagatgaaagaaatattgtctttc 24916647

                              
Query: 476      cagaaagaaaaacc 489
                ||||||||| ||||
Sbjct: 24916646 cagaaagaagaacc 24916633



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                            
Query: 526      tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
                ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 24916596 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 24916537

                                                                            
Query: 586      gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
                |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 24916536 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 24916477

                                                                            
Query: 646      acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
                |||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| |||
Sbjct: 24916476 acaacggctacccaatattcggtggatccctttcccgaacccatacgtgtttccgtcggt 24916417

                    
Query: 706      ctta 709
                ||||
Sbjct: 24916416 ctta 24916413



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                            
Query: 99       ttcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattat 158
                ||||||||| |||| ||||||||| |||||||||||||| || | ||||||| |||| ||
Sbjct: 20875041 ttcctcggcgatcgtgccaaaaacgcgagttccttttggatttcttttttgaccaatgat 20875100

                                  
Query: 159      aaccgcagcattgtcatc 176
                |||||  |||||||||||
Sbjct: 20875101 aaccgttgcattgtcatc 20875118



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                           
Query: 80       taaaattcaattctctcaattcctcggcaatcgcgccaaaaac 122
                ||||||||||| ||||| |||||||||| ||||||||||||||
Sbjct: 32000475 taaaattcaatactctcgattcctcggcgatcgcgccaaaaac 32000433

---

>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1215B07
          Length = 165957

 Score =  305 bits (154), Expect = 1e-79
 Identities = 184/194 (94%)
 Strand = Plus / Minus

                                                                         
Query: 296   caataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatac 355
             |||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 78109 caattacatcaccaatacgagcatatcgctgattactagcagctcctatgacttgaatac 78050

                                                                         
Query: 356   acatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatca 415
             |||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||| |
Sbjct: 78049 acattaattttcgagctccactattatctgctacatttaaaagggtctgaggttaaatta 77990

                                                                         
Query: 416   tattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatattgtctttc 475
             ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 77989 tattattttgatttcaatttgctatttcaatgcaaaaagatgaaagaaatattgtctttc 77930

                           
Query: 476   cagaaagaaaaacc 489
             ||||||||| ||||
Sbjct: 77929 cagaaagaagaacc 77916



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 77879 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 77820

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 77819 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 77760

                                                                         
Query: 646   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
             |||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| |||
Sbjct: 77759 acaacggctacccaatattcggtggatccctttcccgaacccatacgtgtttccgtcggt 77700

                 
Query: 706   ctta 709
             ||||
Sbjct: 77699 ctta 77696

---

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score =  305 bits (154), Expect = 1e-79
 Identities = 328/384 (85%), Gaps = 4/384 (1%)
 Strand = Plus / Plus

                                                                         
Query: 41    tatttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaatt 100
             |||||||||||| ||||| |||||  ||||||||||| || |||||||| | ||||||||
Sbjct: 80435 tatttataatacctcagg-agctagggaaactattttagtgaaattcaaatgtctcaatt 80493

                                                                         
Query: 101   cctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataa 160
             ||   || ||||| ||||||||||||||||||||||| || |||| ||||||||| | ||
Sbjct: 80494 cccgagcgatcgcaccaaaaactcgagttccttttggattcccttcttgatcaatgacaa 80553

                                                                         
Query: 161   ccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatg 220
             | || |||||||||||||| || ||||| |||||||  || | ||||| |||||||||||
Sbjct: 80554 ctgctgcattgtcatcatatcgtattatcataccgttgtcacgtttgagttctttacatg 80613

                                                                         
Query: 221   tacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgt 280
             ||||||||||||||||||  |  ||||| ||||||||||||| ||| | ||| | ||| |
Sbjct: 80614 tacgtacaattacagctctgaccacttctgatctttctagagacatattgggtactgctt 80673

                                                                         
Query: 281   ctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctc 340
             |||||||||||||||||||||| ||||||||| ||||||||||  ||||||     ||||
Sbjct: 80674 ctttgattacagcaacaataacgtcaccaatatgagcatatcggcgattac---tggctc 80730

                                                                         
Query: 341   ctatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaaggg 400
             |||||| ||||||||||||||||| |||||| || || || || ||||||||||||||||
Sbjct: 80731 ctatgattcgaatacacatcaattctcgagccccgctgttatccgctacatttaaaaggg 80790

                                     
Query: 401   tctgaggttgaatcatattatttt 424
             |||||||||||||||||| |||||
Sbjct: 80791 tctgaggttgaatcatatcatttt 80814



 Score =  149 bits (75), Expect = 1e-32
 Identities = 114/127 (89%)
 Strand = Plus / Plus

                                                                         
Query: 583   atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 642
             ||||| ||||| ||||||||||| |||||||| ||||| ||||||||||| ||||| |||
Sbjct: 81003 atagcggctctggctacagtttctgatactccacccatctcataaagtattcgacccggt 81062

                                                                         
Query: 643   ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 702
             |||||||||| |||||| ||||||||||| ||||| ||||| |||||||||||||||| |
Sbjct: 81063 ttaacaacggatacccagtattcgggggatcccttccccgaacccatacgtgtttccgcg 81122

                    
Query: 703   ggtctta 709
             |||||||
Sbjct: 81123 ggtctta 81129

---

>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score =  295 bits (149), Expect = 1e-76
 Identities = 319/374 (85%), Gaps = 4/374 (1%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcc 102
             |||||||||| || || |||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 82356 tttataatacctc-gggagctaatgaaactattttagtaaaatttaattctctcaattcc 82414

                                                                         
Query: 103   tcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc 162
               ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| 
Sbjct: 82415 cgggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaact 82474

                                                                         
Query: 163   gcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgta 222
             ||||||||||||||||| |||||||| || ||||  || | ||||| ||||||||| |||
Sbjct: 82475 gcagcattgtcatcatatcggattatcatcccgttgtcacgtttgagttctttacaggta 82534

                                                                         
Query: 223   cgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtct 282
             || |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| |||
Sbjct: 82535 cgcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttct 82594

                                                                         
Query: 283   ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 342
             ||||| |||||||||||||| ||||||||| ||||||||||  |||| |    |||||||
Sbjct: 82595 ttgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctcct 82651

                                                                         
Query: 343   atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 402
             |||| ||||||||||||||||| |||||| || ||||| || |||||||||||| |||||
Sbjct: 82652 atgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtc 82711

                           
Query: 403   tgaggttgaatcat 416
             ||||||||||||||
Sbjct: 82712 tgaggttgaatcat 82725



 Score =  105 bits (53), Expect = 2e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                         
Query: 609   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
             |||||| ||||||||||||||||| || || ||||||||||| |||||||||||||| ||
Sbjct: 82928 tactccacccatttcataaagtattcgccccggtttaacaacagctacccaatattcagg 82987

                                                      
Query: 669   ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
             ||| || ||||| || |||||||||||||| | ||||||||
Sbjct: 82988 ggatccttttcctgaacccatacgtgtttctgcgggtctta 83028

---

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score =  287 bits (145), Expect = 2e-74
 Identities = 324/382 (84%), Gaps = 4/382 (1%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcc 102
             |||||||||| || || |||||||||||||||||| |||||||| || | ||||||||| 
Sbjct: 80082 tttataatacctc-gggagctaatgaaactattttagtaaaattgaactgtctcaattct 80140

                                                                         
Query: 103   tcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc 162
               ||||||||| |||||||| |||||||||||||| || |||| ||||||||| | ||| 
Sbjct: 80141 cgggcaatcgcaccaaaaacgcgagttccttttggatttccttcttgatcaatcacaact 80200

                                                                         
Query: 163   gcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgta 222
             ||||||||||||||||| || ||||| |||||||  || | ||| | ||||||||| |||
Sbjct: 80201 gcagcattgtcatcatatcgtattatcataccgttgtcacgtttaagttctttacaagta 80260

                                                                         
Query: 223   cgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtct 282
             || |||||||||||||  |  ||||| ||||||||||||||||| |  || | |||||||
Sbjct: 80261 cggacaattacagctctgaccacttctgatctttctagaggcatgtttggaactgcgtct 80320

                                                                         
Query: 283   ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 342
             ||||| |||||||||||||| ||||||||| ||||||||||  |||| |    |||||||
Sbjct: 80321 ttgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctcct 80377

                                                                         
Query: 343   atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 402
             |||| ||||||||||||||||| |||||| || || || ||||||||||| ||| |||||
Sbjct: 80378 atgattcgaatacacatcaattctcgagccccgctgttatctgctacattcaaatgggtc 80437

                                   
Query: 403   tgaggttgaatcatattatttt 424
             |||||||||||||||| |||||
Sbjct: 80438 tgaggttgaatcatatcatttt 80459



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 80/90 (88%)
 Strand = Plus / Plus

                                                                         
Query: 609   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
             |||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||||
Sbjct: 80655 tactccacccatttcataaaggattcgacctggtttaacaacagctacccaatattcggg 80714

                                           
Query: 669   ggacccctttcccgagcccatacgtgtttc 698
              || || || || || ||||||||||||||
Sbjct: 80715 agagcctttacctgaacccatacgtgtttc 80744

---

>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score =  287 bits (145), Expect = 2e-74
 Identities = 318/374 (85%), Gaps = 4/374 (1%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcc 102
             |||||||||| || || |||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 82305 tttataatacctc-gggagctaatgaaactattttagtaaaatttaattctctcaattcc 82363

                                                                         
Query: 103   tcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc 162
               ||| || || ||||||| ||||||||| ||||| || |||| ||||||||| | ||| 
Sbjct: 82364 cgggcgattgcaccaaaaattcgagttccctttggatttccttcttgatcaataacaact 82423

                                                                         
Query: 163   gcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgta 222
             ||||||||||||||||| |||||||| || ||||  || | ||||| ||||||||| |||
Sbjct: 82424 gcagcattgtcatcatatcggattatcatcccgttgtcacgtttgagttctttacaggta 82483

                                                                         
Query: 223   cgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtct 282
             || |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| |||
Sbjct: 82484 cgcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttct 82543

                                                                         
Query: 283   ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 342
             ||||| |||||||||||||| ||||||||| ||||||||||  |||| |    |||||||
Sbjct: 82544 ttgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctcct 82600

                                                                         
Query: 343   atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 402
             |||| ||||||||||||||||| |||||| || ||||| || |||||||||||| |||||
Sbjct: 82601 atgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtc 82660

                           
Query: 403   tgaggttgaatcat 416
             ||||||||||||||
Sbjct: 82661 tgaggttgaatcat 82674



 Score =  105 bits (53), Expect = 2e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                         
Query: 609   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
             |||||| ||||||||||||||||| || || ||||||||||| |||||||||||||| ||
Sbjct: 82882 tactccacccatttcataaagtattcgccccggtttaacaacagctacccaatattcagg 82941

                                                      
Query: 669   ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
             ||| || ||||| || |||||||||||||| | ||||||||
Sbjct: 82942 ggatccttttcctgaacccatacgtgtttctgcgggtctta 82982

---

>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score =  287 bits (145), Expect = 2e-74
 Identities = 318/374 (85%), Gaps = 4/374 (1%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcc 102
             |||||||||| || || |||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 82317 tttataatacctc-gggagctaatgaaactattttagtaaaatttaattctctcaattcc 82375

                                                                         
Query: 103   tcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc 162
               ||| || || ||||||| ||||||||| ||||| || |||| ||||||||| | ||| 
Sbjct: 82376 cgggcgattgcaccaaaaattcgagttccctttggatttccttcttgatcaataacaact 82435

                                                                         
Query: 163   gcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgta 222
             ||||||||||||||||| |||||||| || ||||  || | ||||| ||||||||| |||
Sbjct: 82436 gcagcattgtcatcatatcggattatcatcccgttgtcacgtttgagttctttacaggta 82495

                                                                         
Query: 223   cgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtct 282
             || |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| |||
Sbjct: 82496 cgcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttct 82555

                                                                         
Query: 283   ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 342
             ||||| |||||||||||||| ||||||||| ||||||||||  |||| |    |||||||
Sbjct: 82556 ttgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctcct 82612

                                                                         
Query: 343   atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 402
             |||| ||||||||||||||||| |||||| || ||||| || |||||||||||| |||||
Sbjct: 82613 atgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtc 82672

                           
Query: 403   tgaggttgaatcat 416
             ||||||||||||||
Sbjct: 82673 tgaggttgaatcat 82686



 Score =  105 bits (53), Expect = 2e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                         
Query: 609   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
             |||||| ||||||||||||||||| || || ||||||||||| |||||||||||||| ||
Sbjct: 82894 tactccacccatttcataaagtattcgccccggtttaacaacagctacccaatattcagg 82953

                                                      
Query: 669   ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
             ||| || ||||| || |||||||||||||| | ||||||||
Sbjct: 82954 ggatccttttcctgaacccatacgtgtttctgcgggtctta 82994

---

>gb|DQ069421.1| Acorus americanus ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score =  285 bits (144), Expect = 1e-73
 Identities = 299/350 (85%), Gaps = 3/350 (0%)
 Strand = Plus / Minus

                                                                       
Query: 67  gaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcga 126
           ||||||||||| || |||||||| | ||||||||||   || ||||| ||||||||||||
Sbjct: 347 gaaactattttagtgaaattcaaatgtctcaattcccgagcgatcgcaccaaaaactcga 288

                                                                       
Query: 127 gttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggatt 186
           ||||||||||| || |||| ||||||||| | ||| || |||||||||||||| || |||
Sbjct: 287 gttccttttggattcccttcttgatcaatgacaactgctgcattgtcatcatatcgtatt 228

                                                                       
Query: 187 attataccgtcttcgcatttgaattctttacatgtacgtacaattacagctcgaattact 246
           || |||||||  || | ||||| |||||||||||||||||||||||||||||  |  |||
Sbjct: 227 atcataccgttgtcacgtttgagttctttacatgtacgtacaattacagctctgaccact 168

                                                                       
Query: 247 tcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaataacatca 306
           || ||||||||||||| ||| | ||| | ||| ||||||||||||||||||||||| |||
Sbjct: 167 tctgatctttctagagacatattgggtactgcttctttgattacagcaacaataacgtca 108

                                                                       
Query: 307 ccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacacatcaatttt 366
           |||||| ||||||||||  ||||||     |||||||||| ||||||||||||||||| |
Sbjct: 107 ccaatatgagcatatcggcgattac---tggctcctatgattcgaatacacatcaattct 51

                                                             
Query: 367 cgagctccactattgtctgctacatttaaaagggtctgaggttgaatcat 416
           ||||| || || || || ||||||||||||||||||||||||||||||||
Sbjct: 50  cgagccccgctgttatccgctacatttaaaagggtctgaggttgaatcat 1

---

>gb|DQ069423.1| Nuphar advena ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score =  280 bits (141), Expect = 6e-72
 Identities = 314/370 (84%), Gaps = 4/370 (1%)
 Strand = Plus / Minus

                                                                       
Query: 47  taatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcctcgg 106
           ||||||||| || ||||||||| ||||| || || ||||| || | |||||||||    |
Sbjct: 366 taatacttc-gggagctaatgagactatcttagtgaaatttaactgtctcaattcacgag 308

                                                                       
Query: 107 caatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcag 166
           ||||||  |||||||||||||| |||||||| || |||| ||||||||| | ||| || |
Sbjct: 307 caatcgaaccaaaaactcgagtgccttttggatttccttcttgatcaatgacaactgctg 248

                                                                       
Query: 167 cattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgta 226
           ||||||||||||| || ||||| |||||||  |||| ||||| |||||||||||||||||
Sbjct: 247 cattgtcatcataccgtattatcataccgttgtcgcgtttgagttctttacatgtacgta 188

                                                                       
Query: 227 caattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttga 286
           ||||||||||||  |||||||| |||||||| || ||||| |  |||| ||| |||||||
Sbjct: 187 caattacagctctgattacttctgatctttccaggggcatatttggcactgcttctttga 128

                                                                       
Query: 287 ttacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatga 346
           |||||||||||||||| ||||| ||| |||||||||| | |||||    |||||||||||
Sbjct: 127 ttacagcaacaataacgtcaccgatatgagcatatcggtaattac---tagctcctatga 71

                                                                       
Query: 347 ctcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgag 406
            |||||||||||||| |||||||||||| || ||||| |||||||| ||| |||||||||
Sbjct: 70  ttcgaatacacatcagttttcgagctccgctgttgtccgctacattcaaatgggtctgag 11

                     
Query: 407 gttgaatcat 416
           ||||||||||
Sbjct: 10  gttgaatcat 1

---

>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score =  280 bits (141), Expect = 6e-72
 Identities = 317/374 (84%), Gaps = 4/374 (1%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcc 102
             |||||||||| || || |||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 82452 tttataatacctc-gggagctaatgaaactattttagtaaaatttaattctctcaattcc 82510

                                                                         
Query: 103   tcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc 162
               ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| 
Sbjct: 82511 cgggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaact 82570

                                                                         
Query: 163   gcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgta 222
             |||||||||||||| || || ||||| || ||||  || | ||||| ||||||||| |||
Sbjct: 82571 gcagcattgtcatcgtatcgtattatcatcccgttgtcacgtttgagttctttacaggta 82630

                                                                         
Query: 223   cgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtct 282
             || |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| |||
Sbjct: 82631 cgcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttct 82690

                                                                         
Query: 283   ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 342
             ||||| |||||||||||||| ||||||||| ||||||||||  |||| |    |||||||
Sbjct: 82691 ttgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctcct 82747

                                                                         
Query: 343   atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 402
             |||| ||||||||||||||||| |||||| || ||||| || |||||||||||| |||||
Sbjct: 82748 atgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtc 82807

                           
Query: 403   tgaggttgaatcat 416
             ||||||||||||||
Sbjct: 82808 tgaggttgaatcat 82821



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                         
Query: 609   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
             |||||| ||||||||||||||||| || || ||||||||||| |||||||||||||| ||
Sbjct: 83025 tactccacccatttcataaagtattcgccccggtttaacaacagctacccaatattcagg 83084

                                           
Query: 669   ggacccctttcccgagcccatacgtgtttc 698
             ||| || ||||| || |||||||| |||||
Sbjct: 83085 ggatccttttcctgaacccatacgggtttc 83114

---

>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score =  280 bits (141), Expect = 6e-72
 Identities = 317/374 (84%), Gaps = 4/374 (1%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcc 102
             |||||||||| || || |||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 82449 tttataatacctc-gggagctaatgaaactattttagtaaaatttaattctctcaattcc 82507

                                                                         
Query: 103   tcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc 162
               ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| 
Sbjct: 82508 cgggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaact 82567

                                                                         
Query: 163   gcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgta 222
             |||||||||||||| || || ||||| || ||||  || | ||||| ||||||||| |||
Sbjct: 82568 gcagcattgtcatcgtatcgtattatcatcccgttgtcacgtttgagttctttacaggta 82627

                                                                         
Query: 223   cgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtct 282
             || |||||||||||||  | |||||| ||||||||||| ||||| |  || | ||| |||
Sbjct: 82628 cgcacaattacagctctgactacttctgatctttctaggggcatatttggtactgcttct 82687

                                                                         
Query: 283   ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 342
             ||||| |||||||||||||| ||||||||| ||||||||||  |||| |    |||||||
Sbjct: 82688 ttgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctcct 82744

                                                                         
Query: 343   atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 402
             |||| ||||||||||||||||| |||||| || ||||| || |||||||||||| |||||
Sbjct: 82745 atgattcgaatacacatcaattctcgagccccgctattatccgctacatttaaatgggtc 82804

                           
Query: 403   tgaggttgaatcat 416
             ||||||||||||||
Sbjct: 82805 tgaggttgaatcat 82818



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                         
Query: 609   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
             |||||| ||||||||||||||||| || || ||||||||||| |||||||||||||| ||
Sbjct: 83022 tactccacccatttcataaagtattcgccccggtttaacaacagctacccaatattcagg 83081

                                           
Query: 669   ggacccctttcccgagcccatacgtgtttc 698
             ||| || ||||| || |||||||| |||||
Sbjct: 83082 ggatccttttcctgaacccatacgggtttc 83111

---

>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score =  278 bits (140), Expect = 2e-71
 Identities = 322/381 (84%), Gaps = 4/381 (1%)
 Strand = Plus / Plus

                                                                         
Query: 44    ttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcct 103
             ||||||||| |||||  ||||| ||||||||||| |||||||| || | |||||||||| 
Sbjct: 85542 ttataatacctcaggg-gctaaggaaactattttagtaaaatttaactgtctcaattccc 85600

                                                                         
Query: 104   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 163
              | | ||||| ||||||| |||||||||||||||||| |||| ||||||||| ||||| |
Sbjct: 85601 ggacgatcgcaccaaaaattcgagttccttttgggtttccttcttgatcaataataactg 85660

                                                                         
Query: 164   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 223
             |||||||||||||||| || ||||| |||||||  || | ||||| ||||||||| ||||
Sbjct: 85661 cagcattgtcatcatatcgtattatcataccgttgtcacgtttgagttctttacaggtac 85720

                                                                         
Query: 224   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 283
             |||||||||||||||  |||||||| ||||||||||||||||| |  || | | | ||||
Sbjct: 85721 gtacaattacagctctgattacttctgatctttctagaggcatatttggtactacttctt 85780

                                                                         
Query: 284   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 343
             |||| |||||||||||||| ||||||||| |||| |||||  ||||||    || |||||
Sbjct: 85781 tgatcacagcaacaataacgtcaccaatatgagcgtatcggcgattac---tagttccta 85837

                                                                         
Query: 344   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 403
             ||| ||||||||||||||||| ||| || || || ||||| |||||||| ||| ||||||
Sbjct: 85838 tgattcgaatacacatcaattctcgggccccgctgttgtccgctacattcaaatgggtct 85897

                                  
Query: 404   gaggttgaatcatattatttt 424
             | ||||||||||||| |||||
Sbjct: 85898 ggggttgaatcatatcatttt 85918



 Score =  139 bits (70), Expect = 1e-29
 Identities = 142/166 (85%)
 Strand = Plus / Plus

                                                                         
Query: 544   aattgacttcgtatgggcattttactggccgctatggagatagctgctctagctacagtt 603
             |||||| ||||||| ||||||||    |||||||| || ||||||  |||||||| | ||
Sbjct: 86054 aattgagttcgtataggcattttggacgccgctattgaaatagcttttctagctatattt 86113

                                                                         
Query: 604   tcagatactccccccatttcataaagtatacgacctggtttaacaacggctacccaatat 663
             || | |||||| ||||||||||||||||| | |||||||||||| || ||||||||||||
Sbjct: 86114 tctgctactccgcccatttcataaagtattctacctggtttaacgacagctacccaatat 86173

                                                           
Query: 664   tcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 709
             |||||||| || || ||||| ||||||||||||||||| |||||||
Sbjct: 86174 tcgggggatcctttccccgaacccatacgtgtttccgtaggtctta 86219

---

>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score =  278 bits (140), Expect = 2e-71
 Identities = 323/382 (84%), Gaps = 4/382 (1%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcc 102
             |||||||||| || || |||||||||||||||||| |||||||| || | ||||||||||
Sbjct: 82667 tttataatacctccgg-agctaatgaaactattttagtaaaatttaactgtctcaattcc 82725

                                                                         
Query: 103   tcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc 162
               |||||| || |||||||| |||||||| |||||||| |||| |||||| || | ||||
Sbjct: 82726 cgggcaattgcaccaaaaacccgagttccctttgggtttccttcttgatcgatgacaacc 82785

                                                                         
Query: 163   gcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgta 222
             ||||||||||||||||| || ||||| |||||||  || | ||||| ||||||||| |||
Sbjct: 82786 gcagcattgtcatcatatcgtattatcataccgttatcacgtttgagttctttacaagta 82845

                                                                         
Query: 223   cgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtct 282
             ||||||||||||||||  |  ||||| |||||| |||| ||||| |  |||| ||| |||
Sbjct: 82846 cgtacaattacagctctgaccacttctgatcttgctaggggcatgtttggcactgcttct 82905

                                                                         
Query: 283   ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 342
             ||||| |||||||||||||| ||||| ||| ||||||||||  |||| |    |||||||
Sbjct: 82906 ttgatcacagcaacaataacgtcaccgatatgagcatatcgacgattgc---tagctcct 82962

                                                                         
Query: 343   atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 402
             |||| ||||||||||||||||| |||||| || || || || |||||||| |||||||||
Sbjct: 82963 atgattcgaatacacatcaattctcgagccccgctgttatccgctacattcaaaagggtc 83022

                                   
Query: 403   tgaggttgaatcatattatttt 424
             |||||||||||||||| |||||
Sbjct: 83023 tgaggttgaatcatatcatttt 83044



 Score =  113 bits (57), Expect = 8e-22
 Identities = 90/101 (89%)
 Strand = Plus / Plus

                                                                         
Query: 609   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
             |||||| |||||||||||||| || ||||||||||||||||| |||||||||||||| ||
Sbjct: 83256 tactccacccatttcataaaggattcgacctggtttaacaacagctacccaatattcagg 83315

                                                      
Query: 669   ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
             ||| || || ||||| |||||||||||||| | ||||||||
Sbjct: 83316 ggatcctttccccgaacccatacgtgtttctgcgggtctta 83356

---

>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome
          Length = 152772

 Score =  276 bits (139), Expect = 9e-71
 Identities = 321/380 (84%), Gaps = 4/380 (1%)
 Strand = Plus / Plus

                                                                         
Query: 45    tataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcctc 104
             |||||||| |||||  ||||||||||||||||| |||||||| || | |||||||||   
Sbjct: 80638 tataatacctcaggg-gctaatgaaactattttagtaaaattgaactgtctcaattctcg 80696

                                                                         
Query: 105   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 164
             ||||||||| ||||||||||| ||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 80697 ggcaatcgcaccaaaaactcgcgttccttttggatttccttcttgatcaatcacaactgc 80756

                                                                         
Query: 165   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 224
              |||||||||||||| || ||||| |||||||  || | ||| | ||||||||| |||||
Sbjct: 80757 ggcattgtcatcatatcgtattatcataccgttgtcacgtttaagttctttacaagtacg 80816

                                                                         
Query: 225   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 284
              |||||||||||||  |  ||||| ||||||||||||||||| |  || | |||||||||
Sbjct: 80817 gacaattacagctctgaccacttctgatctttctagaggcatgtttggaactgcgtcttt 80876

                                                                         
Query: 285   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 344
             ||| |||||||||||||| ||||||||| ||||||||||  |||| |    |||||||||
Sbjct: 80877 gatcacagcaacaataacgtcaccaatatgagcatatcggcgattgc---tagctcctat 80933

                                                                         
Query: 345   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 404
             || ||||||||||||||||| |||||| || || || ||||||||||| ||| |||||||
Sbjct: 80934 gattcgaatacacatcaattctcgagccccgctgttatctgctacattcaaatgggtctg 80993

                                 
Query: 405   aggttgaatcatattatttt 424
             |||||||||||||| |||||
Sbjct: 80994 aggttgaatcatatcatttt 81013



 Score =  113 bits (57), Expect = 8e-22
 Identities = 90/101 (89%)
 Strand = Plus / Plus

                                                                         
Query: 609   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
             |||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 81203 tactccacccatttcataaagtattcgacctggtttaacaacagctacccaatattcggg 81262

                                                      
Query: 669   ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
              || || || || || |||||||||||||| | ||||||||
Sbjct: 81263 agagcctttacctgaacccatacgtgtttctgcgggtctta 81303

---

>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score =  276 bits (139), Expect = 9e-71
 Identities = 318/376 (84%), Gaps = 4/376 (1%)
 Strand = Plus / Plus

                                                                         
Query: 41    tatttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaatt 100
             ||||||||||||||| || ||||||||| ||||| || || ||||| || | ||||||||
Sbjct: 86608 tatttataatacttc-gggagctaatgagactatcttagtgaaatttaactgtctcaatt 86666

                                                                         
Query: 101   cctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataa 160
             |    |||||||  ||||||||||| || |||||||| || |||| ||||||||| | ||
Sbjct: 86667 cacgagcaatcgaaccaaaaactcgggtgccttttggatttccttcttgatcaatgacaa 86726

                                                                         
Query: 161   ccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatg 220
             | || |||||||||||||| |||||||| |||||||  ||||  |||| |||||||||||
Sbjct: 86727 ctgctgcattgtcatcataccggattatcataccgttgtcgcgcttgagttctttacatg 86786

                                                                         
Query: 221   tacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgt 280
             ||||||||||||||||||  |||||||| |||||||| || ||||| |  |||| ||| |
Sbjct: 86787 tacgtacaattacagctctgattacttctgatctttccaggggcatatttggcactgctt 86846

                                                                         
Query: 281   ctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctc 340
             |||||||||||||||||||||| ||||| ||| |||||||||| | |||||    |||||
Sbjct: 86847 ctttgattacagcaacaataacgtcaccgatatgagcatatcggtaattac---tagctc 86903

                                                                         
Query: 341   ctatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaaggg 400
             |||||| |||||||||||| | |||||| ||||| || ||||| |||||||| |||||||
Sbjct: 86904 ctatgattcgaatacacataagttttcgggctccgctgttgtccgctacattcaaaaggg 86963

                             
Query: 401   tctgaggttgaatcat 416
             ||||||||||||||||
Sbjct: 86964 tctgaggttgaatcat 86979



 Score =  133 bits (67), Expect = 9e-28
 Identities = 112/127 (88%)
 Strand = Plus / Plus

                                                                         
Query: 583   atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 642
             ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| ||| | |||
Sbjct: 87172 atagcggctctggctacggtttctgatactccgcccatttcataaagtattcgatccggt 87231

                                                                         
Query: 643   ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 702
             ||||| |||| ||||||||||||||| || ||||| ||||| |||||||||||||||| |
Sbjct: 87232 ttaacgacggatacccaatattcgggagatcccttccccgaacccatacgtgtttccgcg 87291

                    
Query: 703   ggtctta 709
             |||||||
Sbjct: 87292 ggtctta 87298

---

>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome
          Length = 152765

 Score =  276 bits (139), Expect = 9e-71
 Identities = 321/380 (84%), Gaps = 4/380 (1%)
 Strand = Plus / Plus

                                                                         
Query: 45    tataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcctc 104
             |||||||| |||||  ||||||||||||||||| |||||||| || | |||||||||   
Sbjct: 80636 tataatacctcaggg-gctaatgaaactattttagtaaaattgaactgtctcaattctcg 80694

                                                                         
Query: 105   ggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgc 164
             ||||||||| ||||||||||| ||||||||||| || |||| ||||||||| | ||| ||
Sbjct: 80695 ggcaatcgcaccaaaaactcgcgttccttttggatttccttcttgatcaatcacaactgc 80754

                                                                         
Query: 165   agcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacg 224
              |||||||||||||| || ||||| |||||||  || | ||| | ||||||||| |||||
Sbjct: 80755 ggcattgtcatcatatcgtattatcataccgttgtcacgtttaagttctttacaagtacg 80814

                                                                         
Query: 225   tacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtcttt 284
              |||||||||||||  |  ||||| ||||||||||||||||| |  || | |||||||||
Sbjct: 80815 gacaattacagctctgaccacttctgatctttctagaggcatgtttggaactgcgtcttt 80874

                                                                         
Query: 285   gattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctat 344
             ||| |||||||||||||| ||||||||| ||||||||||  |||| |    |||||||||
Sbjct: 80875 gatcacagcaacaataacgtcaccaatatgagcatatcggcgattgc---tagctcctat 80931

                                                                         
Query: 345   gactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctg 404
             || ||||||||||||||||| |||||| || || || ||||||||||| ||| |||||||
Sbjct: 80932 gattcgaatacacatcaattctcgagccccgctgttatctgctacattcaaatgggtctg 80991

                                 
Query: 405   aggttgaatcatattatttt 424
             |||||||||||||| |||||
Sbjct: 80992 aggttgaatcatatcatttt 81011



 Score =  113 bits (57), Expect = 8e-22
 Identities = 90/101 (89%)
 Strand = Plus / Plus

                                                                         
Query: 609   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
             |||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 81201 tactccacccatttcataaagtattcgacctggtttaacaacagctacccaatattcggg 81260

                                                      
Query: 669   ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
              || || || || || |||||||||||||| | ||||||||
Sbjct: 81261 agagcctttacctgaacccatacgtgtttctgcgggtctta 81301

---

>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score =  274 bits (138), Expect = 4e-70
 Identities = 323/383 (84%), Gaps = 4/383 (1%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcc 102
             ||||||||||||||||  |||||||||| |||||| || ||||| || | ||||||||| 
Sbjct: 82960 tttataatacttcaggt-gctaatgaaattatttttgtgaaatttaactgtctcaattct 83018

                                                                         
Query: 103   tcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc 162
               ||||||||| ||||||| ||||||||||||||| || |||| ||||||||| | ||||
Sbjct: 83019 cgggcaatcgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaacc 83078

                                                                         
Query: 163   gcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgta 222
             ||||||||||||||||| || ||||| ||||| | ||| | ||||| ||||||||| |||
Sbjct: 83079 gcagcattgtcatcatatcgtattatcataccattttctcgtttgagttctttacaagta 83138

                                                                         
Query: 223   cgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtct 282
             ||||||||||||||||  || ||||| |||||||||| |||  | |  || |  || |  
Sbjct: 83139 cgtacaattacagctctgatcacttctgatctttctaaaggtgtatttgggacggctttc 83198

                                                                         
Query: 283   ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 342
             |||||||||||||||||||| ||||||||| ||||||||||  ||||||    ||| |||
Sbjct: 83199 ttgattacagcaacaataacgtcaccaatatgagcatatcgtcgattac---tagcccct 83255

                                                                         
Query: 343   atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 402
             |||| ||||||||||||||||| ||| ||||| || || ||||||||||| |||||||| 
Sbjct: 83256 atgattcgaatacacatcaattctcgggctccgctgttatctgctacattcaaaagggtt 83315

                                    
Query: 403   tgaggttgaatcatattattttg 425
             |||||||||||||||||||||||
Sbjct: 83316 tgaggttgaatcatattattttg 83338



 Score =  117 bits (59), Expect = 5e-23
 Identities = 119/139 (85%)
 Strand = Plus / Plus

                                                                         
Query: 571   gccgctatggagatagctgctctagctacagtttcagatactccccccatttcataaagt 630
             |||||||| || ||||||  ||| |||| | |||| | |||||| | |||||||||||||
Sbjct: 83516 gccgctattgaaatagcttttctggctatattttcggctactccactcatttcataaagt 83575

                                                                         
Query: 631   atacgacctggtttaacaacggctacccaatattcgggggacccctttcccgagcccata 690
             || | ||||||||||||||| |||||||||||||||||||| || || || || ||||||
Sbjct: 83576 attctacctggtttaacaacagctacccaatattcgggggatcctttccctgaacccata 83635

                                
Query: 691   cgtgtttccgtgggtctta 709
             |||||||| ||||||||||
Sbjct: 83636 cgtgtttctgtgggtctta 83654

---

>gb|AF441853.1|AF441853 Cucumis sativus RBL1 mRNA, complete cds; chloroplast gene for
           chloroplast product
          Length = 703

 Score =  274 bits (138), Expect = 4e-70
 Identities = 323/383 (84%), Gaps = 4/383 (1%)
 Strand = Plus / Minus

                                                                       
Query: 43  tttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcc 102
           ||||||||||||||||  |||||||||| |||||| || ||||| || | ||||||||| 
Sbjct: 436 tttataatacttcaggt-gctaatgaaattatttttgtgaaatttaactgtctcaattct 378

                                                                       
Query: 103 tcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc 162
             ||||||||| ||||||| ||||||||||||||| || |||| ||||||||| | ||||
Sbjct: 377 cgggcaatcgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaacc 318

                                                                       
Query: 163 gcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgta 222
           ||||||||||||||||| || ||||| ||||| | ||| | ||||| ||||||||| |||
Sbjct: 317 gcagcattgtcatcatatcgtattatcataccattttctcgtttgagttctttacaagta 258

                                                                       
Query: 223 cgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtct 282
           ||||||||||||||||  || ||||| |||||||||| |||  | |  || |  || |  
Sbjct: 257 cgtacaattacagctctgatcacttctgatctttctaaaggtgtatttgggacggctttc 198

                                                                       
Query: 283 ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 342
           |||||||||||||||||||| ||||||||| ||||||||||  ||||||    ||| |||
Sbjct: 197 ttgattacagcaacaataacgtcaccaatatgagcatatcgtcgattac---tagcccct 141

                                                                       
Query: 343 atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 402
           |||| ||||||||||||||||| ||| ||||| || || ||||||||||| |||||||| 
Sbjct: 140 atgattcgaatacacatcaattctcgggctccgctgttatctgctacattcaaaagggtt 81

                                  
Query: 403 tgaggttgaatcatattattttg 425
           |||||||||||||||||||||||
Sbjct: 80  tgaggttgaatcatattattttg 58

---

>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score =  274 bits (138), Expect = 4e-70
 Identities = 323/383 (84%), Gaps = 4/383 (1%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcc 102
             ||||||||||||||||  |||||||||| |||||| || ||||| || | ||||||||| 
Sbjct: 83188 tttataatacttcaggt-gctaatgaaattatttttgtgaaatttaactgtctcaattct 83246

                                                                         
Query: 103   tcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc 162
               ||||||||| ||||||| ||||||||||||||| || |||| ||||||||| | ||||
Sbjct: 83247 cgggcaatcgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaacc 83306

                                                                         
Query: 163   gcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgta 222
             ||||||||||||||||| || ||||| ||||| | ||| | ||||| ||||||||| |||
Sbjct: 83307 gcagcattgtcatcatatcgtattatcataccattttctcgtttgagttctttacaagta 83366

                                                                         
Query: 223   cgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtct 282
             ||||||||||||||||  || ||||| |||||||||| |||  | |  || |  || |  
Sbjct: 83367 cgtacaattacagctctgatcacttctgatctttctaaaggtgtatttgggacggctttc 83426

                                                                         
Query: 283   ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 342
             |||||||||||||||||||| ||||||||| ||||||||||  ||||||    ||| |||
Sbjct: 83427 ttgattacagcaacaataacgtcaccaatatgagcatatcgtcgattac---tagcccct 83483

                                                                         
Query: 343   atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 402
             |||| ||||||||||||||||| ||| ||||| || || ||||||||||| |||||||| 
Sbjct: 83484 atgattcgaatacacatcaattctcgggctccgctgttatctgctacattcaaaagggtt 83543

                                    
Query: 403   tgaggttgaatcatattattttg 425
             |||||||||||||||||||||||
Sbjct: 83544 tgaggttgaatcatattattttg 83566



 Score =  117 bits (59), Expect = 5e-23
 Identities = 119/139 (85%)
 Strand = Plus / Plus

                                                                         
Query: 571   gccgctatggagatagctgctctagctacagtttcagatactccccccatttcataaagt 630
             |||||||| || ||||||  ||| |||| | |||| | |||||| | |||||||||||||
Sbjct: 83744 gccgctattgaaatagcttttctggctatattttcggctactccactcatttcataaagt 83803

                                                                         
Query: 631   atacgacctggtttaacaacggctacccaatattcgggggacccctttcccgagcccata 690
             || | ||||||||||||||| |||||||||||||||||||| || || || || ||||||
Sbjct: 83804 attctacctggtttaacaacagctacccaatattcgggggatcctttccctgaacccata 83863

                                
Query: 691   cgtgtttccgtgggtctta 709
             |||||||| ||||||||||
Sbjct: 83864 cgtgtttctgtgggtctta 83882

---

>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score =  272 bits (137), Expect = 1e-69
 Identities = 316/374 (84%), Gaps = 4/374 (1%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcc 102
             |||||||||| || || |||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 82940 tttataatacctc-gggagctaatgaaactattttagtaaaatttaattctctcaattcc 82998

                                                                         
Query: 103   tcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc 162
               ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| 
Sbjct: 82999 cgggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaact 83058

                                                                         
Query: 163   gcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgta 222
             ||||||||||||||||| || |||||||| ||||  || | ||||| ||||||||| || 
Sbjct: 83059 gcagcattgtcatcatatcgtattattatcccgttgtcacgtttgagttctttacaggtc 83118

                                                                         
Query: 223   cgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtct 282
             || |||||||||||||  | |||||| ||||||||||| ||||| |  || |  || |||
Sbjct: 83119 cgcacaattacagctctgactacttctgatctttctaggggcatatttggtatggcttct 83178

                                                                         
Query: 283   ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 342
             ||||| |||||||||||||| ||||||||| ||||||||||  |||| |    |||||||
Sbjct: 83179 ttgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctcct 83235

                                                                         
Query: 343   atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 402
             |||| ||||||||||||||||| |||||| || || || || |||||||||||| |||||
Sbjct: 83236 atgattcgaatacacatcaattctcgagccccgctgttatccgctacatttaaatgggtc 83295

                           
Query: 403   tgaggttgaatcat 416
             ||||||||||||||
Sbjct: 83296 tgaggttgaatcat 83309



 Score =  113 bits (57), Expect = 8e-22
 Identities = 90/101 (89%)
 Strand = Plus / Plus

                                                                         
Query: 609   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
             |||||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||
Sbjct: 83517 tactccacccatttcataaagtattcgacccggtttaacaactgctacccaatattcagg 83576

                                                      
Query: 669   ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
             ||| || ||||| || |||||||||||||| | ||||||||
Sbjct: 83577 ggatccttttcctgaacccatacgtgtttctgcgggtctta 83617

---

>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score =  264 bits (133), Expect = 4e-67
 Identities = 315/374 (84%), Gaps = 4/374 (1%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcc 102
             |||||||||| || || |||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 83177 tttataatacctc-gggagctaatgaaactattttagtaaaatttaattctctcaattcc 83235

                                                                         
Query: 103   tcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc 162
               ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| 
Sbjct: 83236 cgggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaact 83295

                                                                         
Query: 163   gcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgta 222
             ||||||||||||||||| || ||||| || ||||  || | ||||| ||||||||| || 
Sbjct: 83296 gcagcattgtcatcatatcgtattatcatcccgttgtcacgtttgagttctttacaggtc 83355

                                                                         
Query: 223   cgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtct 282
             || |||||||||||||  | |||||| ||||||||||| ||||| |  || |  || |||
Sbjct: 83356 cgcacaattacagctctgactacttctgatctttctaggggcatatttggtacggcttct 83415

                                                                         
Query: 283   ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 342
             ||||| |||||||||||||| ||||||||| ||||||||||  |||| |    |||||||
Sbjct: 83416 ttgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctcct 83472

                                                                         
Query: 343   atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 402
             |||| ||||||||||||||||| |||||| || || || || |||||||||||| |||||
Sbjct: 83473 atgattcgaatacacatcaattctcgagccccgctgttatccgctacatttaaatgggtc 83532

                           
Query: 403   tgaggttgaatcat 416
             ||||||||||||||
Sbjct: 83533 tgaggttgaatcat 83546



 Score =  113 bits (57), Expect = 8e-22
 Identities = 90/101 (89%)
 Strand = Plus / Plus

                                                                         
Query: 609   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
             |||||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||
Sbjct: 83749 tactccacccatttcataaagtattcgacccggtttaacaacagctacccaatattcagg 83808

                                                      
Query: 669   ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
             ||| || ||||| || |||||||||||||| | ||||||||
Sbjct: 83809 ggatccttttcctgaacccatacgtgtttctgcgggtctta 83849

---

>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score =  264 bits (133), Expect = 4e-67
 Identities = 315/374 (84%), Gaps = 4/374 (1%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcc 102
             |||||||||| || || |||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 83420 tttataatacctc-gggagctaatgaaactattttagtaaaatttaattctctcaattcc 83478

                                                                         
Query: 103   tcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc 162
               ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| 
Sbjct: 83479 cgggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaact 83538

                                                                         
Query: 163   gcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgta 222
             ||||||||||||||||| || ||||| || ||||  || | ||||| ||||||||| |||
Sbjct: 83539 gcagcattgtcatcatatcgtattatcatcccgttgtcacgtttgagttctttacaggta 83598

                                                                         
Query: 223   cgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtct 282
             || |||||||||||||  | || ||| ||||||||||| ||||| |  || | ||| |||
Sbjct: 83599 cgcacaattacagctctgactatttctgatctttctaggggcatatttggtactgcttct 83658

                                                                         
Query: 283   ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 342
             ||||| |||||||||||||| ||||||||| ||||||||||  |||| |    |||||||
Sbjct: 83659 ttgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctcct 83715

                                                                         
Query: 343   atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 402
             |||| |||||||||||| |||| |||||| || || || || |||||||||||| |||||
Sbjct: 83716 atgattcgaatacacattaattctcgagccccgctgttatccgctacatttaaatgggtc 83775

                           
Query: 403   tgaggttgaatcat 416
             ||||||||||||||
Sbjct: 83776 tgaggttgaatcat 83789



 Score =  113 bits (57), Expect = 8e-22
 Identities = 90/101 (89%)
 Strand = Plus / Plus

                                                                         
Query: 609   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
             |||||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||
Sbjct: 83997 tactccacccatttcataaagtattcgacccggtttaacaacagctacccaatattcagg 84056

                                                      
Query: 669   ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
             ||| || ||||| || |||||||||||||| | ||||||||
Sbjct: 84057 ggatccttttcctgaacccatacgtgtttctgcgggtctta 84097

---

>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score =  264 bits (133), Expect = 4e-67
 Identities = 315/374 (84%), Gaps = 4/374 (1%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcc 102
             |||||||||| || || |||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 83175 tttataatacctc-gggagctaatgaaactattttagtaaaatttaattctctcaattcc 83233

                                                                         
Query: 103   tcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc 162
               ||| || || ||||||| ||||||||||||||| || |||| ||||||||| | ||| 
Sbjct: 83234 cgggcgattgcaccaaaaattcgagttccttttggatttccttcttgatcaataacaact 83293

                                                                         
Query: 163   gcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgta 222
             ||||||||||||||||| || ||||| || ||||  || | ||||| ||||||||| || 
Sbjct: 83294 gcagcattgtcatcatatcgtattatcatcccgttgtcacgtttgagttctttacaggtc 83353

                                                                         
Query: 223   cgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtct 282
             || |||||||||||||  | |||||| ||||||||||| ||||| |  || |  || |||
Sbjct: 83354 cgcacaattacagctctgactacttctgatctttctaggggcatatttggtacggcttct 83413

                                                                         
Query: 283   ttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcct 342
             ||||| |||||||||||||| ||||||||| ||||||||||  |||| |    |||||||
Sbjct: 83414 ttgatcacagcaacaataacgtcaccaatatgagcatatcgacgattgc---tagctcct 83470

                                                                         
Query: 343   atgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtc 402
             |||| ||||||||||||||||| |||||| || || || || |||||||||||| |||||
Sbjct: 83471 atgattcgaatacacatcaattctcgagccccgctgttatccgctacatttaaatgggtc 83530

                           
Query: 403   tgaggttgaatcat 416
             ||||||||||||||
Sbjct: 83531 tgaggttgaatcat 83544



 Score =  113 bits (57), Expect = 8e-22
 Identities = 90/101 (89%)
 Strand = Plus / Plus

                                                                         
Query: 609   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
             |||||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||
Sbjct: 83747 tactccacccatttcataaagtattcgacccggtttaacaacagctacccaatattcagg 83806

                                                      
Query: 669   ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
             ||| || ||||| || |||||||||||||| | ||||||||
Sbjct: 83807 ggatccttttcctgaacccatacgtgtttctgcgggtctta 83847

---

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score =  262 bits (132), Expect = 1e-66
 Identities = 314/373 (84%), Gaps = 4/373 (1%)
 Strand = Plus / Plus

                                                                         
Query: 44    ttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcct 103
             ||||||||| || || |||||||||||||||||| || ||||| || | |||||||||| 
Sbjct: 85087 ttataatacctc-gggagctaatgaaactattttagtgaaatttaactgtctcaattccc 85145

                                                                         
Query: 104   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 163
              ||| ||||| ||||||| ||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 85146 gggcgatcgcaccaaaaattcgagttccttttggatttccttcttgatcaatgacaacgg 85205

                                                                         
Query: 164   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 223
             |||||||||||||||| || ||||| || ||||  |||| ||||| ||||||||  ||||
Sbjct: 85206 cagcattgtcatcatatcgtattatcatcccgttgtcgcgtttgagttctttacgagtac 85265

                                                                         
Query: 224   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 283
             |||||||||||||||  || ||||| ||||||||||||||  | |  || | ||| || |
Sbjct: 85266 gtacaattacagctctgatcacttctgatctttctagaggtgtatttggtactgcttcct 85325

                                                                         
Query: 284   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 343
             |||| |||||||||||||| ||||||||| ||||||||||  ||||||    ||||||||
Sbjct: 85326 tgatcacagcaacaataacgtcaccaatatgagcatatcggcgattac---tagctccta 85382

                                                                         
Query: 344   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 403
             ||||||||||||||||||||| ||| || || || || ||||||||||| ||| ||||||
Sbjct: 85383 tgactcgaatacacatcaattctcgggccccgctgttatctgctacattcaaatgggtct 85442

                          
Query: 404   gaggttgaatcat 416
             |||||||||||||
Sbjct: 85443 gaggttgaatcat 85455



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 85/101 (84%)
 Strand = Plus / Plus

                                                                         
Query: 609   tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
             |||||| | ||||||||||||||| |  || |||||||| || ||||||||||| |||||
Sbjct: 85669 tactccgctcatttcataaagtattctgcccggtttaacgacagctacccaatactcggg 85728

                                                      
Query: 669   ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
              || || || ||||| |||||||||||||| || |||||||
Sbjct: 85729 agatcctttccccgaacccatacgtgtttctgtaggtctta 85769

---

>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
          Length = 150725

 Score =  262 bits (132), Expect = 1e-66
 Identities = 317/376 (84%), Gaps = 7/376 (1%)
 Strand = Plus / Plus

                                                                         
Query: 44    ttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcct 103
             ||||||||| ||||| |||||||||||||||||| | ||| ||   || || ||||||| 
Sbjct: 79239 ttataatacctcagg-agctaatgaaactattttcgcaaattt---ttgtcgcaattccc 79294

                                                                         
Query: 104   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 163
              |||||| || ||||||| ||||||||||||||| || |||| ||||||||| ||||| |
Sbjct: 79295 gggcaattgcaccaaaaattcgagttccttttggatttccttcttgatcaatgataactg 79354

                                                                         
Query: 164   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 223
             |||||||||||||||| || ||||| |||||||  |||| ||| | ||||||||| ||||
Sbjct: 79355 cagcattgtcatcatatcgtattatcataccgttgtcgcgttttagttctttacaagtac 79414

                                                                         
Query: 224   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 283
             |||||| ||||||||  || ||||| ||||||||||  ||| | | ||| | ||| ||||
Sbjct: 79415 gtacaactacagctctgatcacttctgatctttctaagggcgtgttggggattgcttctt 79474

                                                                         
Query: 284   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 343
             |||| |||||||||||||| ||||||||||||||||||||  | || |    ||||||||
Sbjct: 79475 tgatcacagcaacaataacgtcaccaatacgagcatatcgacggttgc---tagctccta 79531

                                                                         
Query: 344   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 403
             ||| ||||||||||||||||| |||||| || || |||||||||||||| ||| ||||||
Sbjct: 79532 tgattcgaatacacatcaattctcgagccccgctgttgtctgctacattcaaatgggtct 79591

                             
Query: 404   gaggttgaatcatatt 419
             ||||||||||||||||
Sbjct: 79592 gaggttgaatcatatt 79607



 Score =  101 bits (51), Expect = 3e-18
 Identities = 81/91 (89%)
 Strand = Plus / Plus

                                                                         
Query: 619   atttcataaagtatacgacctggtttaacaacggctacccaatattcgggggaccccttt 678
             |||||||||||||| ||||||||||| ||||| ||||||||||||||||| || || || 
Sbjct: 79828 atttcataaagtattcgacctggtttgacaacagctacccaatattcgggagatcctttc 79887

                                            
Query: 679   cccgagcccatacgtgtttccgtgggtctta 709
             ||||| |||||||| ||||||| ||||||||
Sbjct: 79888 cccgaacccatacgggtttccgcgggtctta 79918

---

>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0465E03
          Length = 151206

 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                          
Query: 526    tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
              ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 147753 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 147694

                                                                          
Query: 586    gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
              |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 147693 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 147634

                                                                          
Query: 646    acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
              |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 147633 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 147574

                  
Query: 706    ctta 709
              ||||
Sbjct: 147573 ctta 147570



 Score =  153 bits (77), Expect = 9e-34
 Identities = 80/81 (98%)
 Strand = Plus / Minus

                                                                          
Query: 409    tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 468
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147871 tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 147812

                                   
Query: 469    gtctttccagaaagaaaaacc 489
              |||||||||||||||| ||||
Sbjct: 147811 gtctttccagaaagaagaacc 147791

---

>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1585_D02
          Length = 103172

 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                         
Query: 526   tatatctctaatcgaataaattgacttcgtatgggcattttactggccgctatggagata 585
             ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 55515 tatatttctaaccgaagaaattgacttcgtatgggcattttgctggcagctatggaaata 55456

                                                                         
Query: 586   gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
             |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 55455 gctgctctagctacagtttcggatactccgcccatttcataaagtattcgacctggttta 55396

                                                                         
Query: 646   acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggt 705
             |||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||
Sbjct: 55395 acaacggctacccaatattcgggggatccctttcccgaacccatacgtgtttcggtcggt 55336

                 
Query: 706   ctta 709
             ||||
Sbjct: 55335 ctta 55332



 Score =  153 bits (77), Expect = 9e-34
 Identities = 80/81 (98%)
 Strand = Plus / Minus

                                                                         
Query: 409   tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 468
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55633 tgaatcatattattttgatttcaatttgttatttcaatgcaaaaggatgaaagaaatatt 55574

                                  
Query: 469   gtctttccagaaagaaaaacc 489
             |||||||||||||||| ||||
Sbjct: 55573 gtctttccagaaagaagaacc 55553

---

>dbj|AP004556.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0026A08
          Length = 171272

 Score =  242 bits (122), Expect = 1e-60
 Identities = 158/170 (92%)
 Strand = Plus / Minus

                                                                        
Query: 144  tttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtcttcgca 203
            |||||||||||| |||||| | |||||||  |||||||| ||||||||||| ||||||||
Sbjct: 4998 tttttgatcaatgataacctctgcattgttgtcatagcgtattattataccatcttcgca 4939

                                                                        
Query: 204  tttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttctagagg 263
            |||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 4938 tttgaactctttacatgtatgtacaattacacctcaaattacttcggatctttctagagg 4879

                                                              
Query: 264  catttggggcaatgcgtctttgattacagcaacaataacatcaccaatac 313
            ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4878 catttggggcactgcgtctttgattacagcaacaataacatcaccaatac 4829

---

>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0091M20
          Length = 132976

 Score =  242 bits (122), Expect = 1e-60
 Identities = 158/170 (92%)
 Strand = Plus / Minus

                                                                         
Query: 144   tttttgatcaattataaccgcagcattgtcatcatagcggattattataccgtcttcgca 203
             |||||||||||| |||||| | |||||||  |||||||| ||||||||||| ||||||||
Sbjct: 88345 tttttgatcaatgataacctctgcattgttgtcatagcgtattattataccatcttcgca 88286

                                                                         
Query: 204   tttgaattctttacatgtacgtacaattacagctcgaattacttcggatctttctagagg 263
             |||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 88285 tttgaactctttacatgtatgtacaattacacctcaaattacttcggatctttctagagg 88226

                                                               
Query: 264   catttggggcaatgcgtctttgattacagcaacaataacatcaccaatac 313
             ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 88225 catttggggcactgcgtctttgattacagcaacaataacatcaccaatac 88176

---

>emb|X13336.1|CHSORP Spinacia oleracea plastid genes rps3, rps19, rpl14, rpl16 and rpl22
            for ribosomal proteins S3, S19, L14, L16 and L22
          Length = 4102

 Score =  240 bits (121), Expect = 5e-60
 Identities = 317/379 (83%), Gaps = 10/379 (2%)
 Strand = Plus / Minus

                                                                        
Query: 44   ttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcct 103
            ||||||||| ||||| |||||||||||||||||| | ||| ||   || || ||||||| 
Sbjct: 3697 ttataatacctcagg-agctaatgaaactattttcgcaaattt---ttgtcgcaattccc 3642

                                                                        
Query: 104  cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataacc- 162
             |||||| || ||||||| ||||||||||||||| || |||| ||||||||| |||||  
Sbjct: 3641 gggcaattgcaccaaaaattcgagttccttttggatttccttcttgatcaatgataacaa 3582

                                                                        
Query: 163  --gcagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatg 220
              ||||||||||||||||| || ||||| |||||||  |||| ||| | ||||||||| |
Sbjct: 3581 ctgcagcattgtcatcatatcgtattatcataccgttgtcgcgttttagttctttacaag 3522

                                                                        
Query: 221  tacgtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgt 280
            ||||||||| ||||||||  || ||||| ||||||||||  ||| | | ||| | ||| |
Sbjct: 3521 tacgtacaactacagctctgatcacttctgatctttctaagggcgtgttggggattgctt 3462

                                                                        
Query: 281  ctttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctc 340
            ||||||| |||||||||||||| ||||||||||||||||||||  | || |    |||||
Sbjct: 3461 ctttgatcacagcaacaataacgtcaccaatacgagcatatcgacggttgc---tagctc 3405

                                                                        
Query: 341  ctatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaaggg 400
            |||||| ||||||||||||||||| |||||| || || |||||||||||||| ||| |||
Sbjct: 3404 ctatgattcgaatacacatcaattctcgagccccgctgttgtctgctacattcaaatggg 3345

                               
Query: 401  tctgaggttgaatcatatt 419
            |||||||||||||||||||
Sbjct: 3344 tctgaggttgaatcatatt 3326



 Score =  101 bits (51), Expect = 3e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                        
Query: 619  atttcataaagtatacgacctggtttaacaacggctacccaatattcgggggaccccttt 678
            |||||||||||||| ||||||||||| ||||| ||||||||||||||||| || || || 
Sbjct: 3105 atttcataaagtattcgacctggtttgacaacagctacccaatattcgggagatcctttc 3046

                                           
Query: 679  cccgagcccatacgtgtttccgtgggtctta 709
            ||||| |||||||| ||||||| ||||||||
Sbjct: 3045 cccgaacccatacgggtttccgcgggtctta 3015

---

>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence,
             strain:Columbia
          Length = 154478

 Score =  236 bits (119), Expect = 8e-59
 Identities = 317/381 (83%), Gaps = 4/381 (1%)
 Strand = Plus / Plus

                                                                         
Query: 44    ttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcct 103
             ||||||||| ||||| |||||||||||||||||| ||||| || |||| |||||||||| 
Sbjct: 80696 ttataatacctcagg-agctaatgaaactattttagtaaagtttaattgtctcaattccc 80754

                                                                         
Query: 104   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 163
               |  ||||| ||||||||||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 80755 gtgggatcgccccaaaaactcgagttccttttggatttccttcttgatcaatgacaactg 80814

                                                                         
Query: 164   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 223
             | |||||||||||||| || |||||  | || |  |  | ||||| ||||||||| ||||
Sbjct: 80815 cggcattgtcatcatatcgtattatcgtcccattgttacgtttgagttctttacaagtac 80874

                                                                         
Query: 224   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 283
             ||||||||||||||| ||| ||||| ||||||||||||||  | |  || | ||| ||||
Sbjct: 80875 gtacaattacagctctaatcacttctgatctttctagaggagtatttggtattgcttctt 80934

                                                                         
Query: 284   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 343
             ||||||||||||||||||| ||||||||| ||||||||||  |||||| |||   |||||
Sbjct: 80935 tgattacagcaacaataacgtcaccaatatgagcatatcggcgattactagc---tccta 80991

                                                                         
Query: 344   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 403
             | | ||||||||||||||||| || ||| || || |||||||||||||| |||  ||| |
Sbjct: 80992 ttattcgaatacacatcaattctctagccccgctgttgtctgctacattcaaataggttt 81051

                                  
Query: 404   gaggttgaatcatattatttt 424
             | ||||||||||||| |||||
Sbjct: 81052 gtggttgaatcatatcatttt 81072



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 112/139 (80%)
 Strand = Plus / Plus

                                                                         
Query: 571   gccgctatggagatagctgctctagctacagtttcagatactccccccatttcataaagt 630
             |||||||| || ||||||  ||| |||| | |||| | ||| || |||||||||||||| 
Sbjct: 81232 gccgctattgaaatagcttttcttgctatattttcgggtacaccacccatttcataaagg 81291

                                                                         
Query: 631   atacgacctggtttaacaacggctacccaatattcgggggacccctttcccgagcccata 690
             ||   |||||||||||| || ||||||||||| || ||||| || || || || ||||||
Sbjct: 81292 attttacctggtttaaccacagctacccaatactcaggggatcctttcccagaacccata 81351

                                
Query: 691   cgtgtttccgtgggtctta 709
             || |||||||  |||||||
Sbjct: 81352 cgcgtttccgcaggtctta 81370

---

>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence
          Length = 162686

 Score =  228 bits (115), Expect = 2e-56
 Identities = 297/357 (83%), Gaps = 3/357 (0%)
 Strand = Plus / Plus

                                                                         
Query: 60    agctaatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaa 119
             ||||||||| ||||| || || |||||||| | |||||||||| | || ||||  |||||
Sbjct: 87333 agctaatgatactatcttagtgaaattcaaatgtctcaattccccagcgatcgaaccaaa 87392

                                                                         
Query: 120   aactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcata 179
              ||||||||||||||||| || || | | ||||||| | ||| || ||||||||||||||
Sbjct: 87393 gactcgagttccttttggatttccctctggatcaataacaactgctgcattgtcatcata 87452

                                                                         
Query: 180   gcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctcg 239
              || |||||||||||||  || | ||||| ||||||||||||||||||||||||||||| 
Sbjct: 87453 tcgtattattataccgttgtcacgtttgagttctttacatgtacgtacaattacagctct 87512

                                                                         
Query: 240   aattacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaat 299
              || ||||| |||||||| || ||||| | ||| | ||| ||||||||||||||||||||
Sbjct: 87513 gatcacttctgatctttccaggggcatattgggtactgcttctttgattacagcaacaat 87572

                                                                         
Query: 300   aacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacacat 359
             ||| ||||||||| ||||||||||  | ||||    |||||||| || ||||||||||||
Sbjct: 87573 aacgtcaccaatatgagcatatcgggggttac---tagctcctacgattcgaatacacat 87629

                                                                      
Query: 360   caattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcat 416
             ||||| |||||| || || ||||| |||||||| |||  ||| |||| |||||||||
Sbjct: 87630 caattctcgagccccgctgttgtccgctacattcaaataggtttgagcttgaatcat 87686



 Score =  101 bits (51), Expect = 3e-18
 Identities = 108/127 (85%)
 Strand = Plus / Plus

                                                                         
Query: 583   atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 642
             ||||||||||| || |||||||| |  ||||| |||||||||| |||||| ||||| |||
Sbjct: 87859 atagctgctctggcgacagtttctggcactccgcccatttcatgaagtattcgacccggt 87918

                                                                         
Query: 643   ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 702
             ||||  || |  ||||||||||| || || ||||||||||| |||||||||||||||| |
Sbjct: 87919 ttaattacagaaacccaatattcaggagatccctttcccgaacccatacgtgtttccgcg 87978

                    
Query: 703   ggtctta 709
             |||||||
Sbjct: 87979 ggtctta 87985

---

>gb|DQ069424.1| Ranunculus macranthus ribosomal protein L14 (rpl14) gene, partial
           cds; chloroplast
          Length = 366

 Score =  226 bits (114), Expect = 8e-56
 Identities = 310/371 (83%), Gaps = 6/371 (1%)
 Strand = Plus / Minus

                                                                       
Query: 47  taatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcctcg- 105
           ||||||||||||  ||||||||||||||||| ||||||||||| | |||||| || ||| 
Sbjct: 366 taatacttcaggg-gctaatgaaactattttagtaaaattcaactgtctcaactc-tcga 309

                                                                       
Query: 106 gcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgca 165
           || || || ||||||||||||||||||||||| || |||| ||||||||| | ||| || 
Sbjct: 308 gcgattgcaccaaaaactcgagttccttttggatttccttcttgatcaatgacaactgct 249

                                                                       
Query: 166 gcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtacgt 225
           ||||||||||||||  | ||||| ||||| |  || | ||||| ||||||||| || |||
Sbjct: 248 gcattgtcatcatattgtattatcataccattgtcacgtttgagttctttacacgtgcgt 189

                                                                       
Query: 226 acaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctttg 285
           |||||||||||||  || ||||| ||||||| ||||||||| | ||| | ||| ||||||
Sbjct: 188 acaattacagctctgatcacttctgatctttgtagaggcatattgggaactgcttctttg 129

                                                                       
Query: 286 attacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatg 345
           ||||| ||||||||||| || |||||| ||||||| ||  ||||||    ||||||||||
Sbjct: 128 attaccgcaacaataacgtcgccaatatgagcataacgtcgattac---tagctcctatg 72

                                                                       
Query: 346 actcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctga 405
           | || ||||||||| ||||||| ||| || || ||||| ||||||||||||  |||||||
Sbjct: 71  attctaatacacattaattttctagccccgctgttgtccgctacatttaaataggtctga 12

                      
Query: 406 ggttgaatcat 416
           |||||||||||
Sbjct: 11  ggttgaatcat 1

---

>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete
             sequence
          Length = 163935

 Score =  222 bits (112), Expect = 1e-54
 Identities = 315/381 (82%), Gaps = 4/381 (1%)
 Strand = Plus / Plus

                                                                         
Query: 44    ttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcct 103
             ||||||||| |||||  ||||||||||||||||| || ||| | || ||||||||||| |
Sbjct: 85802 ttataatacctcaggt-gctaatgaaactattttagtgaaacttaactctctcaattcgt 85860

                                                                         
Query: 104   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 163
              ||||||||| ||||||||||| ||||||||||| || |||| ||||||||| | ||| |
Sbjct: 85861 gggcaatcgcaccaaaaactcgggttccttttggatttccttcttgatcaatgacaacag 85920

                                                                         
Query: 164   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 223
             |||||||||||||||| || ||||| |||||||| || ||||| | ||||||||| ||||
Sbjct: 85921 cagcattgtcatcatatcgtattatgataccgtcgtcacatttaagttctttacaagtac 85980

                                                                         
Query: 224   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 283
             |||||||||||||||  |  ||||| ||||||||||| |   |    || ||||| || |
Sbjct: 85981 gtacaattacagctctgaccacttctgatctttctagggaggtgcttggtaatgcttcct 86040

                                                                         
Query: 284   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 343
             |||| |||||||||||||  ||||| ||| ||||||||||  ||||||    |||||| |
Sbjct: 86041 tgatcacagcaacaataatgtcaccgatatgagcatatcgacgattac---tagctccga 86097

                                                                         
Query: 344   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 403
             ||| |||||||||||| |||| |||||| ||||| || || || ||||| ||| |||| |
Sbjct: 86098 tgattcgaatacacattaattctcgagccccactgttatccgcgacattcaaacgggttt 86157

                                  
Query: 404   gaggttgaatcatattatttt 424
             ||||||||||||||| |||||
Sbjct: 86158 gaggttgaatcatatcatttt 86178



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                         
Query: 610   actccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggg 669
             ||||| ||||||||||||||||| | ||| ||||| || || ||||||||||||||||||
Sbjct: 86388 actccacccatttcataaagtattctacccggtttgacgacagctacccaatattcgggg 86447

                                          
Query: 670   gacccctttcccgagcccatacgtgtttc 698
                || || ||||| ||||||||||||||
Sbjct: 86448 tttcctttacccgaacccatacgtgtttc 86476

---

>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score =  206 bits (104), Expect = 7e-50
 Identities = 313/381 (82%), Gaps = 4/381 (1%)
 Strand = Plus / Plus

                                                                         
Query: 44    ttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcct 103
             ||||||||| |||||  ||||||||||||||||| || ||||| || | |||||||||  
Sbjct: 85487 ttataatacctcaggt-gctaatgaaactattttagtgaaatttaactgtctcaattctc 85545

                                                                         
Query: 104   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 163
              ||||||||| ||||||||||||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 85546 gggcaatcgcaccaaaaactcgagttccttttggatttccttcttgatcaatcacaactg 85605

                                                                         
Query: 164   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 223
             ||||||| |||||||| || ||||| |||||||  || | ||| | ||||||||| ||||
Sbjct: 85606 cagcattatcatcatatcgtattatcataccgttgtcacgtttaagttctttacaagtac 85665

                                                                         
Query: 224   gtacaattacagctcgaattacttcggatctttctagaggcatttggggcaatgcgtctt 283
             |||||||||||||||  || || || ||||||||||||||  | |  || ||||| || |
Sbjct: 85666 gtacaattacagctctgatcacctctgatctttctagaggtgtgtttggtaatgcttcct 85725

                                                                         
Query: 284   tgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctccta 343
             |||| |||||||||||||  ||||| ||| ||||||||||  ||||||    ||||||||
Sbjct: 85726 tgatcacagcaacaataatgtcaccgatatgagcatatcggcgattac---tagctccta 85782

                                                                         
Query: 344   tgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtct 403
             ||| || ||||||||| |||| ||| || || || || || |||||||| ||| || | |
Sbjct: 85783 tgattctaatacacattaattctcgggccccgctgttatccgctacattcaaatggcttt 85842

                                  
Query: 404   gaggttgaatcatattatttt 424
             ||||||||||||||| |||||
Sbjct: 85843 gaggttgaatcatatcatttt 85863



 Score =  131 bits (66), Expect = 3e-27
 Identities = 144/170 (84%)
 Strand = Plus / Plus

                                                                         
Query: 540   aataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctac 599
             |||||||||| ||||||| ||||||||    |||||||| || |||||   ||| |||| 
Sbjct: 85998 aataaattgagttcgtataggcattttggacgccgctattgaaatagcctttctggctat 86057

                                                                         
Query: 600   agtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccca 659
             | |||| | |||||| ||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 86058 attttctgctactccgcccatttcataaagtattcgacctggtttaacgacagctaccca 86117

                                                               
Query: 660   atattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 709
             ||||||||| || || || ||||| ||||||||||||||||| |||||||
Sbjct: 86118 atattcgggagatcctttacccgaacccatacgtgtttccgtaggtctta 86167

---

>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence
          Length = 153482

 Score =  202 bits (102), Expect = 1e-48
 Identities = 312/378 (82%), Gaps = 8/378 (2%)
 Strand = Plus / Plus

                                                                         
Query: 44    ttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcct 103
             ||||||||||||||| |||||||||||||||||| ||||| || |||| |||||||||| 
Sbjct: 79787 ttataatacttcagg-agctaatgaaactattttagtaaagtttaattgtctcaattccc 79845

                                                                         
Query: 104   cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 163
               |  ||||| |||||||| |||||||||||||| || |||| ||||||||| | ||| |
Sbjct: 79846 gtgggatcgccccaaaaacgcgagttccttttggatttccttcttgatcaatgacaactg 79905

                                                                         
Query: 164   cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 223
             | |||||||| ||||| || |||||  | || |  |  | ||||| ||||||||| ||||
Sbjct: 79906 cggcattgtcgtcatatcgtattatcgtcccattcttacgtttgagttctttacaagtac 79965

                                                                         
Query: 224   gtacaattacagctcgaattacttcggatctttctagag--gcatttggggcaatgcgtc 281
             |||||||||||||||  |  ||||| |||||||||||||  | |||||||  | ||| ||
Sbjct: 79966 gtacaattacagctctgaccacttctgatctttctagagtagtatttggg--attgcttc 80023

                                                                         
Query: 282   tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 341
              |||||||||||||||||||| ||||||||| ||||||| ||  |||||| |||   |||
Sbjct: 80024 cttgattacagcaacaataacgtcaccaatatgagcatagcggcgattactagc---tcc 80080

                                                                         
Query: 342   tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 401
             ||| | |||||||||||||||||||| ||| || || |||||||||||||| |||  |||
Sbjct: 80081 tattattcgaatacacatcaattttctagccccgctgttgtctgctacattcaaataggt 80140

                               
Query: 402   ctgaggttgaatcatatt 419
              || ||||||||||||||
Sbjct: 80141 ttgtggttgaatcatatt 80158



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 78/94 (82%)
 Strand = Plus / Plus

                                                                         
Query: 616   cccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggggacccc 675
             |||||||||||||| ||   |||||||||||| || |||||||| || || ||||| || 
Sbjct: 80360 cccatttcataaaggattttacctggtttaaccacagctacccagtactctggggatcct 80419

                                               
Query: 676   tttcccgagcccatacgtgtttccgtgggtctta 709
             || || || |||||||| ||||||| ||||||||
Sbjct: 80420 ttcccagaacccatacgcgtttccgcgggtctta 80453

---

>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome
          Length = 150519

 Score =  202 bits (102), Expect = 1e-48
 Identities = 299/364 (82%), Gaps = 3/364 (0%)
 Strand = Plus / Plus

                                                                         
Query: 61    gctaatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaa 120
             ||||||||||||||||| || ||||| || | ||||||||||  ||| || |||| ||||
Sbjct: 78591 gctaatgaaactattttagtgaaattgaactgtctcaattcccgggcgattgcgcaaaaa 78650

                                                                         
Query: 121   actcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatag 180
             | ||||||||||||||| || |||| ||||||||| | ||| |||||||| |||||||| 
Sbjct: 78651 attcgagttccttttggatttccttcttgatcaatgacaactgcagcattatcatcatac 78710

                                                                         
Query: 181   cggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctcga 240
              | ||||||||||| |     | ||||| ||||||||| |||||||||||||||||||  
Sbjct: 78711 tgtattattataccattgctacgtttgagttctttacaagtacgtacaattacagctctg 78770

                                                                         
Query: 241   attacttcggatctttctagaggcatttggggcaatgcgtctttgattacagcaacaata 300
             || ||||| ||||||||||  ||  | |  || | ||| ||||||||||||||||||| |
Sbjct: 78771 atcacttctgatctttctaagggtgtattcggtactgcttctttgattacagcaacaaca 78830

                                                                         
Query: 301   acatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacacatc 360
             |  |||||||||  ||| |||||  |||||| |||   |||||||| |||||||||||||
Sbjct: 78831 atgtcaccaatataagcgtatcgtcgattactagc---tcctatgattcgaatacacatc 78887

                                                                         
Query: 361   aattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcatatta 420
             ||||| || ||||| ||||| || |||||||||||| |||| |||||||||||||||| |
Sbjct: 78888 aatttgcgggctccgctattatcggctacatttaaatgggtttgaggttgaatcatatca 78947

                 
Query: 421   tttt 424
             ||||
Sbjct: 78948 tttt 78951



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                         
Query: 610   actccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggg 669
             ||||| ||||||||||||| |||    || |||||||| |||||||||||||||||||| 
Sbjct: 79160 actccgcccatttcataaactatttttccgggtttaactacggctacccaatattcggga 79219

                                                     
Query: 670   gacccctttcccgagcccatacgtgtttccgtgggtctta 709
             || ||||||||||| |||||||| ||||| || |||||||
Sbjct: 79220 gatccctttcccgaacccatacgcgtttcggtaggtctta 79259

---

>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome
          Length = 452528

 Score =  196 bits (99), Expect = 7e-47
 Identities = 277/335 (82%), Gaps = 16/335 (4%)
 Strand = Plus / Minus

                                                                         
Query: 34    ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattct 93
             |||||||||||| |||||| ||||| |||| |||| ||| |||| || |||||||    |
Sbjct: 99133 ctactagtatttttaatacctcagg-agctcatgagactcttttagtgaaattcataagt 99075

                                                                         
Query: 94    ctcaattcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatca 153
             |||||||||   || ||||| ||||||||||||||||||||||| || |||| |||||||
Sbjct: 99074 ctcaattcccgagcgatcgcaccaaaaactcgagttccttttggatttccttcttgatca 99015

                                                                         
Query: 154   attataaccgcagcattgtcatcatagcggattattataccgtcttcgcatttgaattct 213
             || | |||||        |||||||| || ||||| |||||||  || | ||||| ||||
Sbjct: 99014 atgacaaccg--------tcatcatatcgtattatcataccgttgtcacgtttgagttct 98963

                                                                         
Query: 214   ttacatgtacgtacaattacagctcgaattacttcgg----atctttctagaggcatttg 269
             ||||||||||||||||||||||||||  ||||||| |    |||||||||||||||||| 
Sbjct: 98962 ttacatgtacgtacaattacagctcgtcttacttctgtctgatctttctagaggcatttt 98903

                                                                         
Query: 270   gggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcatatcgctgatt 329
             ||||| ||| ||||||||||||||||||||||| ||||||||| |||||||||  |||||
Sbjct: 98902 gggcactgcttctttgattacagcaacaataacgtcaccaatatgagcatatcagtgatt 98843

                                                
Query: 330   accagcagctcctatgactcgaatacacatcaatt 364
             ||   ||||||||| || ||||||||| |||||||
Sbjct: 98842 ac---cagctcctaagattcgaatacatatcaatt 98811

---

>dbj|AB077365.1| Iris dichotoma plastid DNA, intron region
          Length = 566

 Score =  180 bits (91), Expect = 4e-42
 Identities = 142/159 (89%)
 Strand = Plus / Minus

                                                                       
Query: 543 aaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctacagt 602
           ||||||| ||||||| |||||||| |  || ||||| || ||||||||||| ||||||||
Sbjct: 379 aaattgagttcgtataggcattttgcacgcagctattgaaatagctgctctggctacagt 320

                                                                       
Query: 603 ttcagatactccccccatttcataaagtatacgacctggtttaacaacggctacccaata 662
           ||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 319 ttctgatactccgcccatttcataaagtattcgacctggtttaacaacggatacccaata 260

                                                  
Query: 663 ttcgggggacccctttcccgagcccatacgtgtttccgt 701
           ||||||||| ||||| || || |||||||||||||||||
Sbjct: 259 ttcgggggatcccttccctgaacccatacgtgtttccgt 221



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 389 catttaaaagggtctgaggttgaatcat 416
           ||||||||||||||||||||||||||||
Sbjct: 558 catttaaaagggtctgaggttgaatcat 531

---

>gb|AC135498.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0010M24, complete sequence
          Length = 164853

 Score =  176 bits (89), Expect = 6e-41
 Identities = 140/157 (89%)
 Strand = Plus / Minus

                                                                         
Query: 553   cgtatgggcattttactggccgctatggagatagctgctctagctacagtttcagatact 612
             ||||| ||||||||  |||| |||||||| ||||||||||||||||| | ||| | ||||
Sbjct: 75834 cgtataggcattttggtggcagctatggaaatagctgctctagctactgcttcgggtact 75775

                                                                         
Query: 613   ccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggggac 672
             || ||||||||||||||||| || |||  |||||||||||||||||||||||||||||| 
Sbjct: 75774 ccacccatttcataaagtattcggccttttttaacaacggctacccaatattcgggggat 75715

                                                  
Query: 673   ccctttcccgagcccatacgtgtttccgtgggtctta 709
             ||||||||||| ||||||||||||||||| |||||||
Sbjct: 75714 ccctttcccgaacccatacgtgtttccgtcggtctta 75678

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  176 bits (89), Expect = 6e-41
 Identities = 140/157 (89%)
 Strand = Plus / Plus

                                                                           
Query: 553     cgtatgggcattttactggccgctatggagatagctgctctagctacagtttcagatact 612
               ||||| ||||||||  |||| |||||||| ||||||||||||||||| | ||| | ||||
Sbjct: 9208186 cgtataggcattttggtggcagctatggaaatagctgctctagctactgcttcgggtact 9208245

                                                                           
Query: 613     ccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggggac 672
               || ||||||||||||||||| || |||  |||||||||||||||||||||||||||||| 
Sbjct: 9208246 ccacccatttcataaagtattcggccttttttaacaacggctacccaatattcgggggat 9208305

                                                    
Query: 673     ccctttcccgagcccatacgtgtttccgtgggtctta 709
               ||||||||||| ||||||||||||||||| |||||||
Sbjct: 9208306 ccctttcccgaacccatacgtgtttccgtcggtctta 9208342



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 296      caataacatcaccaatacgagcatatcgctgattaccagc 335
                ||||||| ||||||||| |||||||||  |||||||||||
Sbjct: 11796144 caataacgtcaccaatatgagcatatcagtgattaccagc 11796105

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  176 bits (89), Expect = 6e-41
 Identities = 140/157 (89%)
 Strand = Plus / Plus

                                                                           
Query: 553     cgtatgggcattttactggccgctatggagatagctgctctagctacagtttcagatact 612
               ||||| ||||||||  |||| |||||||| ||||||||||||||||| | ||| | ||||
Sbjct: 9279883 cgtataggcattttggtggcagctatggaaatagctgctctagctactgcttcgggtact 9279942

                                                                           
Query: 613     ccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggggac 672
               || ||||||||||||||||| || |||  |||||||||||||||||||||||||||||| 
Sbjct: 9279943 ccacccatttcataaagtattcggccttttttaacaacggctacccaatattcgggggat 9280002

                                                    
Query: 673     ccctttcccgagcccatacgtgtttccgtgggtctta 709
               ||||||||||| ||||||||||||||||| |||||||
Sbjct: 9280003 ccctttcccgaacccatacgtgtttccgtcggtctta 9280039



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 296      caataacatcaccaatacgagcatatcgctgattaccagc 335
                ||||||| ||||||||| |||||||||  |||||||||||
Sbjct: 11874555 caataacgtcaccaatatgagcatatcagtgattaccagc 11874516

---

>gb|DQ069420.1| Yucca schidigera ribosomal protein L16 (rpl16) gene, partial cds;
           chloroplast
          Length = 390

 Score =  172 bits (87), Expect = 1e-39
 Identities = 147/167 (88%)
 Strand = Plus / Minus

                                                                       
Query: 543 aaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctacagt 602
           ||||||| ||||||| |||||||| |  || ||||| || ||||||| ||| ||||||||
Sbjct: 387 aaattgagttcgtataggcattttgcacgcagctattgaaatagctgttctggctacagt 328

                                                                       
Query: 603 ttcagatactccccccatttcataaagtatacgacctggtttaacaacggctacccaata 662
           ||| |||||||| ||||||||||||||||| ||||||||||||||||| | |||||||||
Sbjct: 327 ttcggatactccacccatttcataaagtattcgacctggtttaacaacagatacccaata 268

                                                          
Query: 663 ttcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 709
           ||||||||| ||||| ||||| |||||||||||||| || |||||||
Sbjct: 267 ttcgggggatcccttccccgaacccatacgtgtttctgtaggtctta 221

---

>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0229B10
          Length = 114509

 Score =  172 bits (87), Expect = 1e-39
 Identities = 146/163 (89%), Gaps = 2/163 (1%)
 Strand = Plus / Plus

                                                                         
Query: 47    taatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcctcgg 106
             |||||||||| | |||| ||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 54859 taatacttcatg-agcttatgaaactattttagtaaaattcaattctctcaattccttgg 54917

                                                                         
Query: 107   caatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcag 166
             | || ||||||||||| | |||||| ||||| || ||||||| |||||| ||||||||||
Sbjct: 54918 cgattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcag 54976

                                                        
Query: 167   cattgtcatcatagcggattattataccgtcttcgcatttgaa 209
             ||||||  |||||||| ||||||||||||||||||||||||||
Sbjct: 54977 cattgttgtcatagcgtattattataccgtcttcgcatttgaa 55019

---

>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0569E11
          Length = 157319

 Score =  172 bits (87), Expect = 1e-39
 Identities = 146/163 (89%), Gaps = 2/163 (1%)
 Strand = Plus / Plus

                                                                          
Query: 47     taatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcctcgg 106
              |||||||||| | |||| ||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 137662 taatacttcatg-agcttatgaaactattttagtaaaattcaattctctcaattccttgg 137720

                                                                          
Query: 107    caatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcag 166
              | || ||||||||||| | |||||| ||||| || ||||||| |||||| ||||||||||
Sbjct: 137721 cgattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcag 137779

                                                         
Query: 167    cattgtcatcatagcggattattataccgtcttcgcatttgaa 209
              ||||||  |||||||| ||||||||||||||||||||||||||
Sbjct: 137780 cattgttgtcatagcgtattattataccgtcttcgcatttgaa 137822

---

>dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0091C18
          Length = 154416

 Score =  172 bits (87), Expect = 1e-39
 Identities = 146/163 (89%), Gaps = 2/163 (1%)
 Strand = Plus / Plus

                                                                          
Query: 47     taatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcctcgg 106
              |||||||||| | |||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 130073 taatacttcatg-agcttatgaaactattttagtaaaattcaattctctcaattcctcgg 130131

                                                                          
Query: 107    caatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcag 166
              | || ||||||||||| | |||||| ||||| || ||||||| |||||| ||||||||||
Sbjct: 130132 ccattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcag 130190

                                                         
Query: 167    cattgtcatcatagcggattattataccgtcttcgcatttgaa 209
              || |||  |||||||| ||||||||||||||||||||||||||
Sbjct: 130191 cactgttgtcatagcgtattattataccgtcttcgcatttgaa 130233

---

>dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1770_H03
          Length = 189893

 Score =  172 bits (87), Expect = 1e-39
 Identities = 146/163 (89%), Gaps = 2/163 (1%)
 Strand = Plus / Plus

                                                                         
Query: 47    taatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcctcgg 106
             |||||||||| | |||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 66843 taatacttcatg-agcttatgaaactattttagtaaaattcaattctctcaattcctcgg 66901

                                                                         
Query: 107   caatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcag 166
             | || ||||||||||| | |||||| ||||| || ||||||| |||||| ||||||||||
Sbjct: 66902 ccattgcgccaaaaacgcaagttccatttggattcccttttt-atcaatgataaccgcag 66960

                                                        
Query: 167   cattgtcatcatagcggattattataccgtcttcgcatttgaa 209
             || |||  |||||||| ||||||||||||||||||||||||||
Sbjct: 66961 cactgttgtcatagcgtattattataccgtcttcgcatttgaa 67003

---

>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion,
              complete genome
          Length = 491515

 Score =  170 bits (86), Expect = 4e-39
 Identities = 212/254 (83%), Gaps = 15/254 (5%)
 Strand = Plus / Minus

                                                                          
Query: 115    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 174
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 331098 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 331047

                                                                          
Query: 175    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 234
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 331046 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 330987

                                                                          
Query: 235    gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 290
              |||||  ||||||| |    |||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 330986 gctcgtcttacttctgtctgatctttctagaggcattttgggcactgcttctttgattac 330927

                                                                          
Query: 291    agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 350
              |||||||||||| ||||||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 330926 agcaacaataacgtcaccaatatgagcatatcagtgattac---cagctcctaagattcg 330870

                            
Query: 351    aatacacatcaatt 364
              |||||| |||||||
Sbjct: 330869 aatacatatcaatt 330856



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 48/55 (87%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                     
Query: 34     ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattca 88
              ||||||||||||||||||| ||||| |||| |||| ||| |||| || |||||||
Sbjct: 331166 ctactagtatttataatacctcagg-agctcatgagactctttttgtgaaattca 331113

---

>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion,
              complete genome
          Length = 490673

 Score =  170 bits (86), Expect = 4e-39
 Identities = 212/254 (83%), Gaps = 15/254 (5%)
 Strand = Plus / Minus

                                                                          
Query: 115    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 174
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 330288 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 330237

                                                                          
Query: 175    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 234
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 330236 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 330177

                                                                          
Query: 235    gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 290
              |||||  ||||||| |    |||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 330176 gctcgtcttacttctgtctgatctttctagaggcattttgggcactgcttctttgattac 330117

                                                                          
Query: 291    agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 350
              |||||||||||| ||||||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 330116 agcaacaataacgtcaccaatatgagcatatcagtgattac---cagctcctaagattcg 330060

                            
Query: 351    aatacacatcaatt 364
              |||||| |||||||
Sbjct: 330059 aatacatatcaatt 330046



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 48/55 (87%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                     
Query: 34     ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattca 88
              ||||||||||||||||||| ||||| |||| |||| ||| |||| || |||||||
Sbjct: 330356 ctactagtatttataatacctcagg-agctcatgagactctttttgtgaaattca 330303

---

>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion,
              complete genome
          Length = 490669

 Score =  170 bits (86), Expect = 4e-39
 Identities = 212/254 (83%), Gaps = 15/254 (5%)
 Strand = Plus / Minus

                                                                          
Query: 115    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 174
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 330285 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 330234

                                                                          
Query: 175    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 234
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 330233 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 330174

                                                                          
Query: 235    gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 290
              |||||  ||||||| |    |||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 330173 gctcgtcttacttctgtctgatctttctagaggcattttgggcactgcttctttgattac 330114

                                                                          
Query: 291    agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 350
              |||||||||||| ||||||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 330113 agcaacaataacgtcaccaatatgagcatatcagtgattac---cagctcctaagattcg 330057

                            
Query: 351    aatacacatcaatt 364
              |||||| |||||||
Sbjct: 330056 aatacatatcaatt 330043



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 48/55 (87%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                     
Query: 34     ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattca 88
              ||||||||||||||||||| ||||| |||| |||| ||| |||| || |||||||
Sbjct: 330353 ctactagtatttataatacctcagg-agctcatgagactctttttgtgaaattca 330300

---

>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome
          Length = 490520

 Score =  170 bits (86), Expect = 4e-39
 Identities = 212/254 (83%), Gaps = 15/254 (5%)
 Strand = Plus / Minus

                                                                          
Query: 115    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 174
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 330142 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 330091

                                                                          
Query: 175    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 234
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 330090 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 330031

                                                                          
Query: 235    gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 290
              |||||  ||||||| |    |||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 330030 gctcgtcttacttctgtctgatctttctagaggcattttgggcactgcttctttgattac 329971

                                                                          
Query: 291    agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 350
              |||||||||||| ||||||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 329970 agcaacaataacgtcaccaatatgagcatatcagtgattac---cagctcctaagattcg 329914

                            
Query: 351    aatacacatcaatt 364
              |||||| |||||||
Sbjct: 329913 aatacatatcaatt 329900



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 48/55 (87%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                     
Query: 34     ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattca 88
              ||||||||||||||||||| ||||| |||| |||| ||| |||| || |||||||
Sbjct: 330210 ctactagtatttataatacctcagg-agctcatgagactctttttgtgaaattca 330157

---

>gb|DQ069419.1| Typha latifolia ribosomal protein L16 (rpl16) gene, partial cds;
           chloroplast
          Length = 408

 Score =  159 bits (80), Expect = 2e-35
 Identities = 137/156 (87%)
 Strand = Plus / Minus

                                                                       
Query: 543 aaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctacagt 602
           ||||||| ||||||| |||||||| |  || ||||| | |||||||||||||||||||||
Sbjct: 396 aaattgagttcgtataggcattttgcgcgcagctattgcgatagctgctctagctacagt 337

                                                                       
Query: 603 ttcagatactccccccatttcataaagtatacgacctggtttaacaacggctacccaata 662
           ||| |||||||| |||||||||||||| || ||||| ||||||||||||| |||||||||
Sbjct: 336 ttctgatactccacccatttcataaaggattcgacccggtttaacaacggatacccaata 277

                                               
Query: 663 ttcgggggacccctttcccgagcccatacgtgtttc 698
           ||||||||| || || || || ||||||||||||||
Sbjct: 276 ttcgggggatcctttaccggaacccatacgtgtttc 241

---

>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score =  155 bits (78), Expect = 2e-34
 Identities = 144/165 (87%), Gaps = 7/165 (4%)
 Strand = Plus / Minus

                                                                         
Query: 204   tttgaattctttacatgtacgtacaattacagctcgaattacttcgg----atctttcta 259
             ||||| ||||||||||||||||||||||||||||||  ||||||| |    |||||||||
Sbjct: 37711 tttgagttctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttcta 37652

                                                                         
Query: 260   gaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaatacgagcat 319
             ||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 37651 gaggcattttgggcactgcttctttgattacagcaacaataacgtcaccaatatgagcat 37592

                                                          
Query: 320   atcgctgattaccagcagctcctatgactcgaatacacatcaatt 364
             |||  |||||||   ||||||||| || ||||||||| |||||||
Sbjct: 37591 atcagtgattac---cagctcctaagattcgaatacatatcaatt 37550

---

>dbj|D13105.1|RICMT09 Oryza sativa (japonica cultivar-group) mitochondrial rp114
           pseudogene, clone:pMTVSCT13
          Length = 645

 Score =  155 bits (78), Expect = 2e-34
 Identities = 210/254 (82%), Gaps = 15/254 (5%)
 Strand = Plus / Plus

                                                                       
Query: 115 ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 174
           ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 161 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 212

                                                                       
Query: 175 tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 234
           ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||||
Sbjct: 213 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattaca 272

                                                                       
Query: 235 gctcgaattacttcgg----atctttctagaggcatttggggcaatgcgtctttgattac 290
           |||||  ||||||| |    |||||||||||| ||||| ||||| ||| |||||||||||
Sbjct: 273 gctcgtcttacttctgtctgatctttctagagccattttgggcactgcttctttgattac 332

                                                                       
Query: 291 agcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcg 350
           |||||||||||| || |||||| |||||||||  |||||||   ||||||||| || |||
Sbjct: 333 agcaacaataacgtccccaatatgagcatatcagtgattac---cagctcctaagattcg 389

                         
Query: 351 aatacacatcaatt 364
           |||||| |||||||
Sbjct: 390 aatacatatcaatt 403



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 48/55 (87%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                  
Query: 34  ctactagtatttataatacttcaggnagctaatgaaactattttggtaaaattca 88
           ||||||||||||||||||| ||||| |||| |||| ||| |||| || |||||||
Sbjct: 93  ctactagtatttataatacctcagg-agctcatgagactctttttgtgaaattca 146

---

>gb|DQ069415.1| Acorus americanus ribosomal protein L16 (rpl16) gene, partial cds;
           chloroplast
          Length = 390

 Score =  149 bits (75), Expect = 1e-32
 Identities = 114/127 (89%)
 Strand = Plus / Minus

                                                                       
Query: 583 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 642
           ||||| ||||| ||||||||||| |||||||| ||||| ||||||||||| ||||| |||
Sbjct: 347 atagcggctctggctacagtttctgatactccacccatctcataaagtattcgacccggt 288

                                                                       
Query: 643 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 702
           |||||||||| |||||| ||||||||||| ||||| ||||| |||||||||||||||| |
Sbjct: 287 ttaacaacggatacccagtattcgggggatcccttccccgaacccatacgtgtttccgcg 228

                  
Query: 703 ggtctta 709
           |||||||
Sbjct: 227 ggtctta 221

---

>gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genomic sequence,
            complete sequence
          Length = 27470

 Score =  149 bits (75), Expect = 1e-32
 Identities = 143/163 (87%), Gaps = 2/163 (1%)
 Strand = Plus / Minus

                                                                        
Query: 47   taatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcctcgg 106
            |||||||||| | |||| ||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 5365 taatacttcatg-agcttatgaaactattttagtaaaattcaattctctcaattccttgg 5307

                                                                        
Query: 107  caatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcag 166
            | || || |||||||| | |||||| ||||| || ||||||| |||||| ||||||| ||
Sbjct: 5306 cgattgcaccaaaaacgcaagttccatttggatttccttttt-atcaatgataaccgtag 5248

                                                       
Query: 167  cattgtcatcatagcggattattataccgtcttcgcatttgaa 209
            || |||| |||||||| |||||||||| |||||||||||||||
Sbjct: 5247 cactgtcgtcatagcgtattattatactgtcttcgcatttgaa 5205

---

>dbj|AB077366.1| Iris bungei plastid DNA, intron region
          Length = 576

 Score =  149 bits (75), Expect = 1e-32
 Identities = 114/127 (89%)
 Strand = Plus / Minus

                                                                       
Query: 583 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 642
           ||||||||||| ||||||||||| |||||||| ||||||||||||||||| || || |||
Sbjct: 330 atagctgctctggctacagtttctgatactccgcccatttcataaagtattcggcccggt 271

                                                                       
Query: 643 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 702
           |||||||||| |||||||||||| ||||| ||||| || || ||||| ||||||||||||
Sbjct: 270 ttaacaacggatacccaatattcaggggatcccttccctgaacccatgcgtgtttccgtg 211

                  
Query: 703 ggtctta 709
           |||||||
Sbjct: 210 ggtctta 204



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                       
Query: 389 catttaaaagggtctgaggttgaatcatattattttgatttcaatttgttatttcaatgc 448
           |||||||||||||||||||||||||||||| ||||| |||| ||| ||||||||||||||
Sbjct: 568 catttaaaagggtctgaggttgaatcatatcatttttatttgaatctgttatttcaatgc 509

              
Query: 449 aaa 451
           |||
Sbjct: 508 aaa 506

---

>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0439E07
          Length = 176486

 Score =  145 bits (73), Expect = 2e-31
 Identities = 160/189 (84%)
 Strand = Plus / Minus

                                                                         
Query: 133   tttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggattattata 192
             ||||| || |||||||||||||| |||||  | |||||||  | |||| | |||||||||
Sbjct: 33438 tttggatttcctttttgatcaatgataacgactgcattgttgttatagagtattattata 33379

                                                                         
Query: 193   ccgtcttcgcatttgaattctttacatgtacgtacaattacagctcgaattacttcggat 252
             |||| || ||||||||| ||  |||||||| | |||||||||| ||| |||||||  |||
Sbjct: 33378 ccgtttttgcatttgaaatccatacatgtatgcacaattacagatcgtattacttttgat 33319

                                                                         
Query: 253   ctttctagaggcatttggggcaatgcgtctttgattacagcaacaataacatcaccaata 312
             |||||||||||||| | || || ||| ||||| |||||||||||||||||||||||||||
Sbjct: 33318 ctttctagaggcatcttggacactgcatcttttattacagcaacaataacatcaccaata 33259

                      
Query: 313   cgagcatat 321
             |||| ||||
Sbjct: 33258 cgagtatat 33250

---

>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1046_F10
          Length = 118472

 Score =  141 bits (71), Expect = 4e-30
 Identities = 126/143 (88%), Gaps = 1/143 (0%)
 Strand = Plus / Minus

                                                                         
Query: 67    gaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaaactcga 126
             ||||||||||| |||||||||||||||||||||| |||| | |||||||||||||| | |
Sbjct: 87867 gaaactattttagtaaaattcaattctctcaattactcgacgatcgcgccaaaaacgcaa 87808

                                                                         
Query: 127   gttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatagcggatt 186
             ||||| ||||| || ||||||| |  ||| ||| |||  ||||||||||||||||| |||
Sbjct: 87807 gttccatttggatttccttttt-actaatgatatccgttgcattgtcatcatagcgtatt 87749

                                    
Query: 187   attataccgtcttcgcatttgaa 209
             |||||||||||||||||||||||
Sbjct: 87748 attataccgtcttcgcatttgaa 87726

---

>dbj|AB096925.1| Papaver somniferum chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 493

 Score =  141 bits (71), Expect = 4e-30
 Identities = 113/127 (88%)
 Strand = Plus / Minus

                                                                       
Query: 583 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 642
           |||||| |||| |||||| |||| |||||||| ||||||||||||||||| ||||| |||
Sbjct: 304 atagcttctctggctacaatttctgatactccacccatttcataaagtattcgacccggt 245

                                                                       
Query: 643 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 702
           ||||| || | ||||||||||||||| || |||||||||||||||||||| |||||||| 
Sbjct: 244 ttaacgacagatacccaatattcgggagatccctttcccgagcccatacgcgtttccgta 185

                  
Query: 703 ggtctta 709
           |||||||
Sbjct: 184 ggtctta 178

---

>dbj|AB096924.1| Papaver setigerum chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 493

 Score =  141 bits (71), Expect = 4e-30
 Identities = 113/127 (88%)
 Strand = Plus / Minus

                                                                       
Query: 583 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 642
           |||||| |||| |||||| |||| |||||||| ||||||||||||||||| ||||| |||
Sbjct: 304 atagcttctctggctacaatttctgatactccacccatttcataaagtattcgacccggt 245

                                                                       
Query: 643 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 702
           ||||| || | ||||||||||||||| || |||||||||||||||||||| |||||||| 
Sbjct: 244 ttaacgacagatacccaatattcgggagatccctttcccgagcccatacgcgtttccgta 185

                  
Query: 703 ggtctta 709
           |||||||
Sbjct: 184 ggtctta 178

---

>dbj|AB096923.1| Papaver rhoeas chloroplast rpl16 gene for ribosomal protein large
           subunit 16, partial cds
          Length = 493

 Score =  133 bits (67), Expect = 9e-28
 Identities = 112/127 (88%)
 Strand = Plus / Minus

                                                                       
Query: 583 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 642
           |||||| |||| |||||| |||| |||||||| ||||||||||||||||| ||||| |||
Sbjct: 304 atagcttctctggctacaatttctgatactccacccatttcataaagtattcgacccggt 245

                                                                       
Query: 643 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 702
           ||||| || | ||||||||||||||| || ||||| |||||||||||||| |||||||| 
Sbjct: 244 ttaacgacagatacccaatattcgggagatcccttccccgagcccatacgcgtttccgta 185

                  
Query: 703 ggtctta 709
           |||||||
Sbjct: 184 ggtctta 178

---

>dbj|AB096922.1| Papaver pseudo-orientale chloroplast rpl16 gene for ribosomal
           protein large subunit 16, partial cds
          Length = 494

 Score =  133 bits (67), Expect = 9e-28
 Identities = 112/127 (88%)
 Strand = Plus / Minus

                                                                       
Query: 583 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 642
           |||||| |||| |||||| |||| |||||||| ||||||||||||||||| ||||| |||
Sbjct: 304 atagcttctctggctacaatttctgatactccacccatttcataaagtattcgacccggt 245

                                                                       
Query: 643 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 702
           ||||| || | ||||||||||||||| || ||||| |||||||||||||| |||||||| 
Sbjct: 244 ttaacgacagatacccaatattcgggagatcccttccccgagcccatacgcgtttccgta 185

                  
Query: 703 ggtctta 709
           |||||||
Sbjct: 184 ggtctta 178

---

>dbj|AB096921.1| Papaver orientale chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 494

 Score =  133 bits (67), Expect = 9e-28
 Identities = 112/127 (88%)
 Strand = Plus / Minus

                                                                       
Query: 583 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 642
           |||||| |||| |||||| |||| |||||||| ||||||||||||||||| ||||| |||
Sbjct: 304 atagcttctctggctacaatttctgatactccacccatttcataaagtattcgacccggt 245

                                                                       
Query: 643 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 702
           ||||| || | ||||||||||||||| || ||||| |||||||||||||| |||||||| 
Sbjct: 244 ttaacgacagatacccaatattcgggagatcccttccccgagcccatacgcgtttccgta 185

                  
Query: 703 ggtctta 709
           |||||||
Sbjct: 184 ggtctta 178

---

>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence
          Length = 124033

 Score =  131 bits (66), Expect = 3e-27
 Identities = 293/366 (80%), Gaps = 7/366 (1%)
 Strand = Plus / Minus

                                                                         
Query: 61    gctaatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaa 120
             ||||||||||||||||| || ||||| || | |||||||||   ||| || |||  ||||
Sbjct: 45026 gctaatgaaactattttagtgaaatttaactgtctcaattctcgggctattgcggaaaaa 44967

                                                                         
Query: 121   actcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatag 180
             | ||||||||||||||| || |||| || |||||| | |||||| ||||| |||||||| 
Sbjct: 44966 attcgagttccttttggatttccttctttatcaatgagaaccgccgcattatcatcatac 44907

                                                                         
Query: 181   cggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctcga 240
                ||||||||||| |     | ||| | ||||||||| ||||||||||||||||| |  
Sbjct: 44906 tttattattataccattactacgttttagttctttacaagtacgtacaattacagccctg 44847

                                                                         
Query: 241   attacttcggatctttctagag--gcatttggggcaatgcgtctttgattacagcaacaa 298
             || ||||| |||||||||| ||  | ||||||  |  ||| | |||||||||||||||||
Sbjct: 44846 atcacttcagatctttctaaagatgaatttggtac--tgcttttttgattacagcaacaa 44789

                                                                         
Query: 299   taacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaatacaca 358
              ||  |||||||||  |||||| ||  |||||| |||   |||||||| |||||||||||
Sbjct: 44788 caatgtcaccaatataagcataccgtcgattactagc---tcctatgattcgaatacaca 44732

                                                                         
Query: 359   tcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcatat 418
             ||||||  || ||||| ||||| || ||||||||||||  ||| ||||||||||||||||
Sbjct: 44731 tcaattcgcgggctccgctattatcggctacatttaaataggtttgaggttgaatcatat 44672

                   
Query: 419   tatttt 424
              |||||
Sbjct: 44671 catttt 44666



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 138/171 (80%)
 Strand = Plus / Minus

                                                                         
Query: 539   gaataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagcta 598
             |||| |||||| ||||||| ||||||||    |||||||| || |||||   ||||||||
Sbjct: 44537 gaatgaattgagttcgtataggcattttggatgccgctattgaaatagcctttctagcta 44478

                                                                         
Query: 599   cagtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccc 658
              | |||| |  || || |||||||||||||||||    || |||||||| || |||||||
Sbjct: 44477 tattttctgggacccctcccatttcataaagtattttgccgggtttaacgacagctaccc 44418

                                                                
Query: 659   aatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 709
             |||||||||| || || |||||||| |||||||| ||||| || |||||||
Sbjct: 44417 aatattcgggagatccttttcccgaacccatacgcgtttcggtaggtctta 44367

---

>gb|AF536225.1| Vigna angularis chloroplast S10B operon, partial sequence
          Length = 6550

 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/216 (82%), Gaps = 1/216 (0%)
 Strand = Plus / Minus

                                                                        
Query: 44   ttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcct 103
            ||||||||| |||||  ||||||||||||||||| || ||||| || | |||||||||| 
Sbjct: 5904 ttataatacctcaggt-gctaatgaaactattttagtgaaatttaactgtctcaattccc 5846

                                                                        
Query: 104  cggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccg 163
             ||| || |||| ||| | ||||||||||||||| || |||| ||||||||||||||| |
Sbjct: 5845 gggcgattgcgcaaaagattcgagttccttttggatttccttcttgatcaattataactg 5786

                                                                        
Query: 164  cagcattgtcatcatagcggattattataccgtcttcgcatttgaattctttacatgtac 223
            ||||||| ||||||||  | |||||||||||||     | ||| | || |||||| ||||
Sbjct: 5785 cagcattatcatcatactgaattattataccgttgctacgttttagttgtttacaagtac 5726

                                                
Query: 224  gtacaattacagctcgaattacttcggatctttcta 259
            |||||||||||||||  || ||||| ||||||||||
Sbjct: 5725 gtacaattacagctctgatcacttcagatctttcta 5690



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                        
Query: 609  tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
            |||||| |||||||||||||||||    || ||||||||||| |||||||||||||||||
Sbjct: 5321 tactccacccatttcataaagtattttcccaggtttaacaacagctacccaatattcggg 5262

                                                     
Query: 669  ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
              | || ||||| || |||||||||||||| || |||||||
Sbjct: 5261 aaatccttttcctgaacccatacgtgtttcagtaggtctta 5221



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 116/143 (81%), Gaps = 3/143 (2%)
 Strand = Plus / Minus

                                                                        
Query: 282  tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 341
            ||||||||||||||||| ||  || ||||||  |||||||||  |||||| |||   |||
Sbjct: 5667 tttgattacagcaacaacaatgtcgccaatataagcatatcgtcgattactagc---tcc 5611

                                                                        
Query: 342  tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 401
            || || |||||||||||||| ||  || ||||| || || || |||||||| ||| | ||
Sbjct: 5610 taggattcgaatacacatcagttcacgtgctccgctgttatccgctacattcaaatgagt 5551

                                   
Query: 402  ctgaggttgaatcatattatttt 424
             |||||||||||||||| |||||
Sbjct: 5550 ttgaggttgaatcatatcatttt 5528

---

>dbj|AB077335.1| Allium altaicum plastid DNA, intron region
          Length = 551

 Score =  129 bits (65), Expect = 1e-26
 Identities = 101/113 (89%)
 Strand = Plus / Plus

                                                                       
Query: 586 gctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttta 645
           |||||||| ||||||||||| || ||||| |||||||| |||||||| ||||| ||||||
Sbjct: 205 gctgctctggctacagtttctgagactccgcccatttcgtaaagtattcgaccgggttta 264

                                                                
Query: 646 acaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
           ||||| | ||||||||||||||| || ||||||||||| ||||||||||||||
Sbjct: 265 acaacagatacccaatattcgggagatccctttcccgaccccatacgtgtttc 317



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 389 catttaaaagggtctgaggttgaatcata 417
           |||||||||||||||||||||||||||||
Sbjct: 543 catttaaaagggtctgaggttgaatcata 515

---

>gb|DQ069417.1| Nuphar advena ribosomal protein L16 (rpl16) gene, partial cds;
           chloroplast
          Length = 396

 Score =  125 bits (63), Expect = 2e-25
 Identities = 111/127 (87%)
 Strand = Plus / Minus

                                                                       
Query: 583 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 642
           ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| ||| | |||
Sbjct: 353 atagcggctctggctacggtttctgatactccgcccatttcataaagtattcgatccggt 294

                                                                       
Query: 643 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 702
           ||||| |||| |||||||||||| || || ||||| ||||| |||||||||||||||| |
Sbjct: 293 ttaacgacggatacccaatattcaggagatcccttccccgaacccatacgtgtttccgcg 234

                  
Query: 703 ggtctta 709
           |||||||
Sbjct: 233 ggtctta 227

---

>dbj|AB096920.1| Papaver bracteatum chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 494

 Score =  125 bits (63), Expect = 2e-25
 Identities = 111/127 (87%)
 Strand = Plus / Minus

                                                                       
Query: 583 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 642
           |||||| |||| |||||| |||| |||||||| ||||||||||||||||| ||||| |||
Sbjct: 304 atagcttctctggctacaatttctgatactccacccatttcataaagtattcgacccggt 245

                                                                       
Query: 643 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtg 702
           ||||| || | |||||||||||| || || ||||| |||||||||||||| |||||||| 
Sbjct: 244 ttaacgacagatacccaatattcaggagatcccttccccgagcccatacgagtttccgta 185

                  
Query: 703 ggtctta 709
           |||||||
Sbjct: 184 ggtctta 178

---

>dbj|AB199893.1| Angelica acutiloba var. iwatensis chloroplast rpl16 gene for
           ribosomal protein large subunit 16, partial cds, and
           rpl16-rpl14 spacer
          Length = 463

 Score =  121 bits (61), Expect = 3e-24
 Identities = 91/101 (90%)
 Strand = Plus / Minus

                                                                       
Query: 609 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
           |||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||
Sbjct: 278 tactccacccatttcataaagtattcgacctggtttaacaacagctacccaatattcagg 219

                                                    
Query: 669 ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
           ||| || || ||||| |||||||||||||| | ||||||||
Sbjct: 218 ggatcctttccccgaacccatacgtgtttctgcgggtctta 178

---

>dbj|AB199892.1| Angelica acutiloba var. sugiyamae chloroplast rpl16 gene for
           ribosomal protein large subunit 16, partial cds, and
           rpl16-rpl14 spacer
          Length = 463

 Score =  121 bits (61), Expect = 3e-24
 Identities = 91/101 (90%)
 Strand = Plus / Minus

                                                                       
Query: 609 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
           |||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||
Sbjct: 278 tactccacccatttcataaagtattcgacctggtttaacaacagctacccaatattcagg 219

                                                    
Query: 669 ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
           ||| || || ||||| |||||||||||||| | ||||||||
Sbjct: 218 ggatcctttccccgaacccatacgtgtttctgcgggtctta 178

---

>dbj|AB199891.1| Angelica acutiloba chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds, and rpl16-rpl14 spacer
          Length = 463

 Score =  121 bits (61), Expect = 3e-24
 Identities = 91/101 (90%)
 Strand = Plus / Minus

                                                                       
Query: 609 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
           |||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||
Sbjct: 278 tactccacccatttcataaagtattcgacctggtttaacaacagctacccaatattcagg 219

                                                    
Query: 669 ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
           ||| || || ||||| |||||||||||||| | ||||||||
Sbjct: 218 ggatcctttccccgaacccatacgtgtttctgcgggtctta 178

---

>emb|X03834.1|CHSOL16 Spirodela oligorhiza chloroplast gene for ribosomal protein L16
          Length = 2064

 Score =  121 bits (61), Expect = 3e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                        
Query: 583  atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 642
            ||||||| ||| || |||||||| ||||| ||||| |||||||||||||| |||||||||
Sbjct: 1838 atagctgttctggcgacagtttcggataccccccctatttcataaagtattcgacctggt 1779

                                                                 
Query: 643  ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgt 695
            |||||||||| |||||| |||||||| || ||||| ||||| |||||||||||
Sbjct: 1778 ttaacaacggatacccagtattcgggagatcccttccccgaacccatacgtgt 1726



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 385  gctacatttaaaagggtctgaggttgaatcatattatttt 424
            |||||||| ||||||||||||||||||||||||| |||||
Sbjct: 2049 gctacattcaaaagggtctgaggttgaatcatatcatttt 2010

---

>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome
          Length = 152218

 Score =  117 bits (59), Expect = 5e-23
 Identities = 164/199 (82%)
 Strand = Plus / Plus

                                                                         
Query: 61    gctaatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaa 120
             ||||||||||||||||| || ||||| || | ||||||||||  ||| || || | ||| 
Sbjct: 79725 gctaatgaaactattttagtgaaatttaactgtctcaattcccgggcgattgcacaaaag 79784

                                                                         
Query: 121   actcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatag 180
             | ||||||||||||||| || |||| ||||||||| | ||| |||||||| |||||||| 
Sbjct: 79785 attcgagttccttttggatttccttcttgatcaatgacaactgcagcattatcatcatac 79844

                                                                         
Query: 181   cggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctcga 240
              | |||||||||||||     | ||||| ||||||||| |||||||||||||||||||  
Sbjct: 79845 tgaattattataccgttgctacgtttgagttctttacaagtacgtacaattacagctctg 79904

                                
Query: 241   attacttcggatctttcta 259
             || ||||| ||||||||||
Sbjct: 79905 atcacttctgatctttcta 79923



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 118/143 (82%), Gaps = 3/143 (2%)
 Strand = Plus / Plus

                                                                         
Query: 282   tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 341
             ||||||||||||||||| ||  |||||||||  |||||||||  |||||| |||   |||
Sbjct: 79946 tttgattacagcaacaacaatgtcaccaatataagcatatcgtcgattactagc---tcc 80002

                                                                         
Query: 342   tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 401
             || || |||||||||||||| ||  || ||||| ||||| || |||||||| ||| | ||
Sbjct: 80003 taggattcgaatacacatcagttcgcgtgctccgctattatcagctacattcaaatgagt 80062

                                    
Query: 402   ctgaggttgaatcatattatttt 424
              |||||||||||||||| |||||
Sbjct: 80063 ttgaggttgaatcatatcatttt 80085



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                         
Query: 616   cccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggggacccc 675
             |||||||||||||||||    || |||||||| || ||||||||||||||||| || || 
Sbjct: 80288 cccatttcataaagtattttcccaggtttaacgacagctacccaatattcgggagaacct 80347

                                               
Query: 676   tttcccgagcccatacgtgtttccgtgggtctta 709
             ||||| || |||||||||||||| || |||||||
Sbjct: 80348 tttcctgaacccatacgtgtttcagtaggtctta 80381

---

>gb|AC133862.6| Medicago truncatula clone mth2-30d7, complete sequence
          Length = 130054

 Score =  115 bits (58), Expect = 2e-22
 Identities = 249/310 (80%), Gaps = 7/310 (2%)
 Strand = Plus / Plus

                                                                         
Query: 117   aaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatc 176
             ||||| ||||||||||||||| || |||| || |||||| | |||||| ||||| |||||
Sbjct: 30545 aaaaattcgagttccttttggatttccttctttatcaatgagaaccgccgcattatcatc 30604

                                                                         
Query: 177   atagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagc 236
             |||    ||||||||||| |     | ||| | ||||||||| |||||||||||||||||
Sbjct: 30605 atactttattattataccattactacgttttagttctttacaagtacgtacaattacagc 30664

                                                                         
Query: 237   tcgaattacttcggatctttctagag--gcatttggggcaatgcgtctttgattacagca 294
              |  || ||||| |||||||||| ||  | ||||||  |  ||| | |||||||||||||
Sbjct: 30665 cctgatcacttcagatctttctaaagatgaatttggtac--tgcttttttgattacagca 30722

                                                                         
Query: 295   acaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaata 354
             |||| ||  |||||||||  |||||| ||  |||||| |||   |||||||| |||||||
Sbjct: 30723 acaacaatgtcaccaatataagcataccgtcgattactagc---tcctatgattcgaata 30779

                                                                         
Query: 355   cacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatc 414
             ||||||||||  || ||||| ||||| || ||||||||||||  ||| ||||||||||||
Sbjct: 30780 cacatcaattcgcgggctccgctattatcggctacatttaaataggtttgaggttgaatc 30839

                       
Query: 415   atattatttt 424
             |||| |||||
Sbjct: 30840 atatcatttt 30849



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 138/171 (80%)
 Strand = Plus / Plus

                                                                         
Query: 539   gaataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagcta 598
             |||| |||||| ||||||| ||||||||    |||||||| || |||||   ||||||||
Sbjct: 30978 gaatgaattgagttcgtataggcattttggatgccgctattgaaatagcctttctagcta 31037

                                                                         
Query: 599   cagtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccc 658
              | |||| |  || || |||||||||||||||||    || |||||||| || |||||||
Sbjct: 31038 tattttctgggacccctcccatttcataaagtattttgccgggtttaacgacagctaccc 31097

                                                                
Query: 659   aatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 709
             |||||||||| || || |||||||| |||||||| ||||| || |||||||
Sbjct: 31098 aatattcgggagatccttttcccgaacccatacgcgtttcggtaggtctta 31148

---

>gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete sequence
          Length = 140624

 Score =  115 bits (58), Expect = 2e-22
 Identities = 249/310 (80%), Gaps = 7/310 (2%)
 Strand = Plus / Minus

                                                                          
Query: 117    aaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatc 176
              ||||| ||||||||||||||| || |||| || |||||| | |||||| ||||| |||||
Sbjct: 114958 aaaaattcgagttccttttggatttccttctttatcaatgagaaccgccgcattatcatc 114899

                                                                          
Query: 177    atagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagc 236
              |||    ||||||||||| |     | ||| | ||||||||| |||||||||||||||||
Sbjct: 114898 atactttattattataccattactacgttttagttctttacaagtacgtacaattacagc 114839

                                                                          
Query: 237    tcgaattacttcggatctttctagag--gcatttggggcaatgcgtctttgattacagca 294
               |  || ||||| |||||||||| ||  | ||||||  |  ||| | |||||||||||||
Sbjct: 114838 cctgatcacttcagatctttctaaagatgaatttggtac--tgcttttttgattacagca 114781

                                                                          
Query: 295    acaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactcgaata 354
              |||| ||  |||||||||  |||||| ||  |||||| |||   |||||||| |||||||
Sbjct: 114780 acaacaatgtcaccaatataagcataccgtcgattactagc---tcctatgattcgaata 114724

                                                                          
Query: 355    cacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatc 414
              ||||||||||  || ||||| ||||| || ||||||||||||  ||| ||||||||||||
Sbjct: 114723 cacatcaattcgcgggctccgctattatcggctacatttaaataggtttgaggttgaatc 114664

                        
Query: 415    atattatttt 424
              |||| |||||
Sbjct: 114663 atatcatttt 114654



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 138/171 (80%)
 Strand = Plus / Minus

                                                                          
Query: 539    gaataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagcta 598
              |||| |||||| ||||||| ||||||||    |||||||| || |||||   ||||||||
Sbjct: 114525 gaatgaattgagttcgtataggcattttggatgccgctattgaaatagcctttctagcta 114466

                                                                          
Query: 599    cagtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccc 658
               | |||| |  || || |||||||||||||||||    || |||||||| || |||||||
Sbjct: 114465 tattttctgggacccctcccatttcataaagtattttgccgggtttaacgacagctaccc 114406

                                                                 
Query: 659    aatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 709
              |||||||||| || || |||||||| |||||||| ||||| || |||||||
Sbjct: 114405 aatattcgggagatccttttcccgaacccatacgcgtttcggtaggtctta 114355

---

>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence
          Length = 119707

 Score =  111 bits (56), Expect = 3e-21
 Identities = 119/139 (85%), Gaps = 1/139 (0%)
 Strand = Plus / Plus

                                                                         
Query: 39    agtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaa 98
             |||| |||||||||||| || ||| |||||||||||||| || |||||||||| ||||||
Sbjct: 60553 agtacttataatacttc-gggagccaatgaaactattttcgtgaaattcaattgtctcaa 60611

                                                                         
Query: 99    ttcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattat 158
             |||||  |||| ||  ||||||||||||||||||||||| || ||||  |||||||| | 
Sbjct: 60612 ttcctgagcaaccggaccaaaaactcgagttccttttggatttccttcctgatcaatgac 60671

                                
Query: 159   aaccgcagcattgtcatca 177
             ||| || ||||||||||||
Sbjct: 60672 aacggctgcattgtcatca 60690



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 97/114 (85%)
 Strand = Plus / Plus

                                                                         
Query: 585   agctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttt 644
             |||||||||||| || ||||| |||||||| ||||||||||||||||| ||||||||| |
Sbjct: 61101 agctgctctagcgacggtttcggatactccgcccatttcataaagtattcgacctggtct 61160

                                                                   
Query: 645   aacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
              |  || | ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 61161 gatgacagatacccaatattcgggagatcctttcccggaacccatacgtgtttc 61214



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 337   gctcctatgactcgaatacacatcaattttcgagctccact 377
             |||||||  |||||||||||||| | |||||| ||||||||
Sbjct: 60847 gctcctagaactcgaatacacattatttttcgggctccact 60887

---

>emb|X68048.1|CHPVHISG Phaseolus vulgaris chloroplast DNA for tRNA-His gene region
          Length = 1698

 Score =  109 bits (55), Expect = 1e-20
 Identities = 163/199 (81%)
 Strand = Plus / Plus

                                                                        
Query: 61   gctaatgaaactattttggtaaaattcaattctctcaattcctcggcaatcgcgccaaaa 120
            ||||||||||||||||| || ||||| || | ||||||||||  ||| || |||| ||| 
Sbjct: 970  gctaatgaaactattttagtgaaatttaactgtctcaattcccgggcgattgcgcaaaag 1029

                                                                        
Query: 121  actcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtcatcatag 180
            | ||||||||||||||| || |||| ||||||||||| ||| |||||||| |||||||| 
Sbjct: 1030 attcgagttccttttggatttccttcttgatcaattacaactgcagcattatcatcatac 1089

                                                                        
Query: 181  cggattattataccgtcttcgcatttgaattctttacatgtacgtacaattacagctcga 240
             | |||||||||||||     | ||| | || |||||| || ||||||||||||||||  
Sbjct: 1090 tgaattattataccgttgctacgttttagttgtttacaagtccgtacaattacagctctg 1149

                               
Query: 241  attacttcggatctttcta 259
            || ||||| ||||||||||
Sbjct: 1150 atcacttctgatctttcta 1168



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 85/101 (84%)
 Strand = Plus / Plus

                                                                        
Query: 609  tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
            |||||| |||||||||||||||||    || ||||||||||| |||||||||||||||||
Sbjct: 1529 tactccacccatttcataaagtattttcccaggtttaacaacagctacccaatattcggg 1588

                                                     
Query: 669  ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
              | || ||||| || ||||||||| |||| || |||||||
Sbjct: 1589 aaatccttttcctgaacccatacgtctttcagtaggtctta 1629



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 389  catttaaaagggtctgaggttgaatcatattatttt 424
            |||||||| | || |||||||||||||||| |||||
Sbjct: 1296 catttaaatgagtttgaggttgaatcatatcatttt 1331

---

>dbj|AB077337.1| Saussurea involucrata plastid DNA, intron region
          Length = 541

 Score =  109 bits (55), Expect = 1e-20
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                       
Query: 591 tctagctacagtttcagatactccccccatttcataaagtatacgacctggtttaacaac 650
           |||||||| | |||| | |||||| |||||||||||||| || |||||||||||||||||
Sbjct: 323 tctagctatattttctgttactccacccatttcataaaggattcgacctggtttaacaac 264

                                                                      
Query: 651 ggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 709
            ||||||||||||||||| || || || || || |||||||||||||| | ||||||||
Sbjct: 263 agctacccaatattcgggagagcctttacctgaacccatacgtgtttctgcgggtctta 205



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                               
Query: 389 catttaaaagggtctgaggttgaatcatattatttt 424
           |||||||||||||||||||||||||||||| |||||
Sbjct: 533 catttaaaagggtctgaggttgaatcatatgatttt 498

---

>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome
          Length = 116866

 Score =  103 bits (52), Expect = 8e-19
 Identities = 118/139 (84%), Gaps = 1/139 (0%)
 Strand = Plus / Plus

                                                                         
Query: 39    agtatttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaa 98
             |||| |||||| ||||| || ||| |||||||||||||| || |||||||||| ||||||
Sbjct: 58649 agtacttataagacttc-gggagccaatgaaactattttagtgaaattcaattgtctcaa 58707

                                                                         
Query: 99    ttcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattat 158
             |||||  |||| ||  ||||||||||||||||||||||| || ||||  |||||||| | 
Sbjct: 58708 ttcctgagcaaccggaccaaaaactcgagttccttttggatttccttcctgatcaatgac 58767

                                
Query: 159   aaccgcagcattgtcatca 177
             ||| || ||||||||||||
Sbjct: 58768 aacggctgcattgtcatca 58786



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 98/114 (85%)
 Strand = Plus / Plus

                                                                         
Query: 585   agctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggttt 644
             |||||||||||| || ||||| |||||||| ||||||||||||||||| |||||||||||
Sbjct: 59191 agctgctctagcgacggtttcggatactccgcccatttcataaagtattcgacctggttt 59250

                                                                   
Query: 645   aacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
              |  || | ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 59251 gatgacagatacccaatattcgggagatcctttcccggaacccatacgtgtttc 59304



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 337   gctcctatgactcgaatacacatcaattttcgagctccact 377
             |||||||  |||||||||||||| | |||||| ||||||||
Sbjct: 58943 gctcctagaactcgaatacacattatttttcgggctccact 58983

---

>gb|DQ069418.1| Ranunculus macranthus ribosomal protein L16 (rpl16) gene, partial
           cds; chloroplast
          Length = 405

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                       
Query: 574 gctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtata 633
           ||||| || |||||| |||| |||||| |||| |||||||| ||||||||||||||||| 
Sbjct: 362 gctatagaaatagcttctctggctacaatttctgatactccacccatttcataaagtatt 303

                                                                       
Query: 634 cgacctggtttaacaacggctacccaatattcgggggacccctttcccgagcccatacgt 693
           ||||| |||||||| |||  ||||||| ||||||| || || || || || |||||||||
Sbjct: 302 cgaccaggtttaacgacgaatacccaaaattcgggagatcctttcccggaacccatacgt 243

                
Query: 694 gtttc 698
           |||||
Sbjct: 242 gtttc 238

---

>dbj|AB201297.1| Prunus campanulata chloroplast rpl16 gene for ribosomal protein
           L16, partial cds, specimen_voucher:Cherry-Ohta 161 (TFA)
          Length = 414

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                       
Query: 609 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
           |||||| | ||||||||||||||| | ||| ||||||||||| |||||||||||||||||
Sbjct: 250 tactccgctcatttcataaagtattctaccgggtttaacaacagctacccaatattcggg 191

                                                    
Query: 669 ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
            || || || ||||| |||||||||||||| || |||||||
Sbjct: 190 agatcctttacccgaacccatacgtgtttctgtaggtctta 150

---

>dbj|AB201296.1| Prunus pseudocerasus chloroplast rpl16 gene for ribosomal protein
           L16, partial cds, specimen_voucher:Cherry-Ohta 009 (TFA)
          Length = 419

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                       
Query: 609 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
           |||||| | ||||||||||||||| | ||| ||||||||||| |||||||||||||||||
Sbjct: 250 tactccgctcatttcataaagtattctaccgggtttaacaacagctacccaatattcggg 191

                                                    
Query: 669 ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
            || || || ||||| |||||||||||||| || |||||||
Sbjct: 190 agatcctttacccgaacccatacgtgtttctgtaggtctta 150

---

>dbj|AB201295.1| Prunus maximowiczii chloroplast rpl16 gene for ribosomal protein
           L16, partial cds, specimen_voucher:Cherry-Ohta 158 (TFA)
          Length = 413

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                       
Query: 609 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
           |||||| | ||||||||||||||| | ||| ||||||||||| |||||||||||||||||
Sbjct: 250 tactccgctcatttcataaagtattctaccgggtttaacaacagctacccaatattcggg 191

                                                    
Query: 669 ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
            || || || ||||| |||||||||||||| || |||||||
Sbjct: 190 agatcctttacccgaacccatacgtgtttctgtaggtctta 150

---

>dbj|AB201294.1| Prunus subhirtella var. ascendens chloroplast rpl16 gene for
           ribosomal protein L16, partial cds,
           specimen_voucher:Cherry-Ohta 152 (TFA)
          Length = 419

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                       
Query: 609 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
           |||||| | ||||||||||||||| | ||| ||||||||||| |||||||||||||||||
Sbjct: 250 tactccgctcatttcataaagtattctaccgggtttaacaacagctacccaatattcggg 191

                                                    
Query: 669 ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
            || || || ||||| |||||||||||||| || |||||||
Sbjct: 190 agatcctttacccgaacccatacgtgtttctgtaggtctta 150

---

>dbj|AB201293.1| Prunus apetala chloroplast rpl16 gene for ribosomal protein L16,
           partial cds, specimen_voucher:Cherry-Ohta 093 (TFA)
          Length = 412

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                       
Query: 609 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
           |||||| | ||||||||||||||| | ||| ||||||||||| |||||||||||||||||
Sbjct: 250 tactccgctcatttcataaagtattctaccgggtttaacaacagctacccaatattcggg 191

                                                    
Query: 669 ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
            || || || ||||| |||||||||||||| || |||||||
Sbjct: 190 agatcctttacccgaacccatacgtgtttctgtaggtctta 150

---

>dbj|AB201292.1| Prunus apetala chloroplast rpl16 gene for ribosomal protein L16,
           partial cds, specimen_voucher:Cherry-Ohta 164 (TFA)
          Length = 413

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                       
Query: 609 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
           |||||| | ||||||||||||||| | ||| ||||||||||| |||||||||||||||||
Sbjct: 250 tactccgctcatttcataaagtattctaccgggtttaacaacagctacccaatattcggg 191

                                                    
Query: 669 ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
            || || || ||||| |||||||||||||| || |||||||
Sbjct: 190 agatcctttacccgaacccatacgtgtttctgtaggtctta 150

---

>dbj|AB112068.1| Scutellaria baicalensis chloroplast rpl16 gene for ribosomal
           protein large subunit 16, partial cds
          Length = 485

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 100/117 (85%)
 Strand = Plus / Minus

                                                                       
Query: 593 tagctacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacgg 652
           |||||| | |||||| |||||| |||||||| || ||||| |  || ||||||||||| |
Sbjct: 294 tagctatattttcagttactccacccatttcgtatagtattctccccggtttaacaacag 235

                                                                    
Query: 653 ctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 709
           ||||||||||||| ||||| || || ||||| |||||||||||||||| ||||||||
Sbjct: 234 ctacccaatattcaggggatcctttccccgaacccatacgtgtttccgcgggtctta 178

---

>dbj|AB077333.1| Ferula feruloides plastid DNA, intron region
          Length = 531

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 80/90 (88%), Gaps = 1/90 (1%)
 Strand = Plus / Minus

                                                                       
Query: 621 ttcataaagtatacgacctggtttaac-aacggctacccaatattcgggggacccctttc 679
           |||||||||||| |||||||||||||| ||| |||||||||||||| ||||| || || |
Sbjct: 290 ttcataaagtattcgacctggtttaaccaacagctacccaatattcaggggatcctttac 231

                                         
Query: 680 ccgagcccatacgtgtttccgtgggtctta 709
           |||| |||||||||||||| | ||||||||
Sbjct: 230 ccgaacccatacgtgtttctgcgggtctta 201



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 389 catttaaaagggtctgaggttgaa 412
           ||||||||||||||||||||||||
Sbjct: 523 catttaaaagggtctgaggttgaa 500

---

>dbj|AB112072.1| Scutellaria lateriflora chloroplast rpl16 gene for ribosomal
           protein large subunit 16, partial cds
          Length = 485

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                       
Query: 593 tagctacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacgg 652
           |||||| | |||||| |||||| |||||||| || ||||| |  || ||||||||||| |
Sbjct: 294 tagctatattttcagttactccacccatttcgtatagtattctccccggtttaacaacag 235

                                                                    
Query: 653 ctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 709
           ||||||||||||| ||||| || || ||||| ||||||||||||||||  |||||||
Sbjct: 234 ctacccaatattcaggggatcctttccccgaccccatacgtgtttccgcaggtctta 178

---

>dbj|AB112071.1| Scutellaria indica chloroplast rpl16 gene for robosomal protein
           large subunit 16, partial cds
          Length = 484

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                       
Query: 593 tagctacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacgg 652
           |||||| | |||||| |||||| |||||||| || ||||| |  || ||||||||||| |
Sbjct: 294 tagctatattttcagttactccacccatttcgtatagtattctccccggtttaacaacag 235

                                                                    
Query: 653 ctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 709
           ||||||||||||| ||||| || || ||||| ||||||||||||||||  |||||||
Sbjct: 234 ctacccaatattcaggggatcctttccccgaacccatacgtgtttccgcaggtctta 178

---

>dbj|AB112069.1| Scutellaria galericulata chloroplast rpl16 gene for ribosomal
           protein large subunit 16, partial cds
          Length = 485

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                       
Query: 593 tagctacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacgg 652
           |||||| | |||||| |||||| |||||||| || ||||| |  || ||||||||||| |
Sbjct: 294 tagctatattttcagttactccacccatttcgtatagtattctccccggtttaacaacag 235

                                                                    
Query: 653 ctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 709
           ||||||||||||| ||||| || || ||||| ||||||||||||||||  |||||||
Sbjct: 234 ctacccaatattcaggggatcctttccccgaacccatacgtgtttccgcaggtctta 178

---

>dbj|AB112067.1| Scutellaria altissima chloroplast rpl16 gene for ribosormal protein
           large subunit 16, partial cds
          Length = 485

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                       
Query: 593 tagctacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacgg 652
           |||||| | |||||| |||||| |||||||| || ||||| |  || ||||||||||| |
Sbjct: 294 tagctatattttcagttactccacccatttcgtatagtattctccccggtttaacaacag 235

                                                                    
Query: 653 ctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 709
           ||||||||||||| ||||| || || ||||| ||||||||||||||||  |||||||
Sbjct: 234 ctacccaatattcaggggatcctttccccgaacccatacgtgtttccgcaggtctta 178

---

>gb|DQ069416.1| Ginkgo biloba ribosomal protein L16 (rpl16) gene, partial cds;
           chloroplast
          Length = 414

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 98/116 (84%)
 Strand = Plus / Minus

                                                                       
Query: 583 atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 642
           |||||||||||||||||||| || |||||||| || |||||||||||||| |||||||| 
Sbjct: 356 atagctgctctagctacagtctctgatactccgcctatttcataaagtattcgacctggc 297

                                                                   
Query: 643 ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            | || || | |||||| |||||||  || || || ||||| ||||||||||||||
Sbjct: 296 ctgacgacagatacccagtattcggtagatcctttccccgaacccatacgtgtttc 241

---

>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0560B06
          Length = 161720

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                          
Query: 597    tacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctac 656
              |||||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||
Sbjct: 147642 tacagtttcagatactccgcccttttcataaagtactcgacctggtttaacaacggctac 147583

---

>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete
             Sequence, complete sequence
          Length = 105198

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                         
Query: 597   tacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctac 656
             |||||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||
Sbjct: 85252 tacagtttcagatactccgcccttttcataaagtactcgacctggtttaacaacggctac 85193

---

>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0043B10
          Length = 167399

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                          
Query: 597    tacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctac 656
              |||||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||
Sbjct: 103556 tacagtttcagatactccgcccttttcataaagtactcgacctggtttaacaacggctac 103497

---

>dbj|AB116628.1| Cistanche deserticola chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 486

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 133/160 (83%), Gaps = 2/160 (1%)
 Strand = Plus / Minus

                                                                       
Query: 540 aataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctac 599
           |||||||||| ||||||| ||||||||    || |||||  | ||||||  |||||||| 
Sbjct: 347 aataaattgagttcgtataggcatttttgatgctgctattaaaatagctcgtctagctat 288

                                                                       
Query: 600 agtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccca 659
           | |||| | |||||| ||||||||||| ||||| ||  | ||||||||||| ||||||||
Sbjct: 287 attttcggttactccgcccatttcatatagtattcgttccggtttaacaacagctaccca 228

                                                   
Query: 660 atattcgggggacccctttccc-gagcccatacgtgtttc 698
           |||||||||| || |||||||| || ||||||||||||||
Sbjct: 227 atattcgggg-actcctttccccgaacccatacgtgtttc 189

---

>dbj|AB116625.1| Cistanche deserticola chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds, strain: CdK/2
          Length = 484

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 133/160 (83%), Gaps = 2/160 (1%)
 Strand = Plus / Minus

                                                                       
Query: 540 aataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctac 599
           |||||||||| ||||||| ||||||||    || |||||  | ||||||  |||||||| 
Sbjct: 347 aataaattgagttcgtataggcatttttgatgctgctattaaaatagctcgtctagctat 288

                                                                       
Query: 600 agtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccca 659
           | |||| | |||||| ||||||||||| ||||| ||  | ||||||||||| ||||||||
Sbjct: 287 attttcggttactccgcccatttcatatagtattcgttccggtttaacaacagctaccca 228

                                                   
Query: 660 atattcgggggacccctttccc-gagcccatacgtgtttc 698
           |||||||||| || |||||||| || ||||||||||||||
Sbjct: 227 atattcgggg-actcctttccccgaacccatacgtgtttc 189

---

>dbj|AB116624.1| Cistanche deserticola chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds, strain: CdK/1
          Length = 484

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 133/160 (83%), Gaps = 2/160 (1%)
 Strand = Plus / Minus

                                                                       
Query: 540 aataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctac 599
           |||||||||| ||||||| ||||||||    || |||||  | ||||||  |||||||| 
Sbjct: 347 aataaattgagttcgtataggcatttttgatgctgctattaaaatagctcgtctagctat 288

                                                                       
Query: 600 agtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccca 659
           | |||| | |||||| ||||||||||| ||||| ||  | ||||||||||| ||||||||
Sbjct: 287 attttcggttactccgcccatttcatatagtattcgttccggtttaacaacagctaccca 228

                                                   
Query: 660 atattcgggggacccctttccc-gagcccatacgtgtttc 698
           |||||||||| || |||||||| || ||||||||||||||
Sbjct: 227 atattcgggg-actcctttccccgaacccatacgtgtttc 189

---

>dbj|AB062414.1| Cistanche salsa chloroplast rpl16 gene for ribosomal protein large
           subunit 16, partial cds, country:Turkey:Konya
          Length = 485

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 133/160 (83%), Gaps = 2/160 (1%)
 Strand = Plus / Minus

                                                                       
Query: 540 aataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctac 599
           |||||||||| ||||||| ||||||||    || |||||  | ||||||  |||||||| 
Sbjct: 347 aataaattgagttcgtataggcatttttgatgctgctattaaaatagctcgtctagctat 288

                                                                       
Query: 600 agtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccca 659
           | |||| | |||||| ||||||||||| ||||| ||  | ||||||||||| ||||||||
Sbjct: 287 attttcggttactccgcccatttcatatagtattcgttccggtttaacaacagctaccca 228

                                                   
Query: 660 atattcgggggacccctttccc-gagcccatacgtgtttc 698
           |||||||||| || |||||||| || ||||||||||||||
Sbjct: 227 atattcgggg-actcctttccccgaacccatacgtgtttc 189

---

>dbj|AB062413.1| Cistanche salsa chloroplast rpl16 gene for ribosomal protein large
           subunit 16, partial cds, country:China:Xinjian
          Length = 486

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 133/160 (83%), Gaps = 2/160 (1%)
 Strand = Plus / Minus

                                                                       
Query: 540 aataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctac 599
           |||||||||| ||||||| ||||||||    || |||||  | ||||||  |||||||| 
Sbjct: 347 aataaattgagttcgtataggcatttttgatgctgctattaaaatagctcgtctagctat 288

                                                                       
Query: 600 agtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccca 659
           | |||| | |||||| ||||||||||| ||||| ||  | ||||||||||| ||||||||
Sbjct: 287 attttcggttactccgcccatttcatatagtattcgttccggtttaacaacagctaccca 228

                                                   
Query: 660 atattcgggggacccctttccc-gagcccatacgtgtttc 698
           |||||||||| || |||||||| || ||||||||||||||
Sbjct: 227 atattcgggg-actcctttccccgaacccatacgtgtttc 189

---

>dbj|AB062412.1| Cistanche salsa chloroplast rpl16 gene for ribosomal protein large
           subunit 16, partial cds, country:China:Ningxia, Yanchi
          Length = 485

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 133/160 (83%), Gaps = 2/160 (1%)
 Strand = Plus / Minus

                                                                       
Query: 540 aataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctac 599
           |||||||||| ||||||| ||||||||    || |||||  | ||||||  |||||||| 
Sbjct: 347 aataaattgagttcgtataggcatttttgatgctgctattaaaatagctcgtctagctat 288

                                                                       
Query: 600 agtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccca 659
           | |||| | |||||| ||||||||||| ||||| ||  | ||||||||||| ||||||||
Sbjct: 287 attttcggttactccgcccatttcatatagtattcgttccggtttaacaacagctaccca 228

                                                   
Query: 660 atattcgggggacccctttccc-gagcccatacgtgtttc 698
           |||||||||| || |||||||| || ||||||||||||||
Sbjct: 227 atattcgggg-actcctttccccgaacccatacgtgtttc 189

---

>dbj|AB062411.1| Cistanche deserticola chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 486

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 133/160 (83%), Gaps = 2/160 (1%)
 Strand = Plus / Minus

                                                                       
Query: 540 aataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctac 599
           |||||||||| ||||||| ||||||||    || |||||  | ||||||  |||||||| 
Sbjct: 347 aataaattgagttcgtataggcatttttgatgctgctattaaaatagctcgtctagctat 288

                                                                       
Query: 600 agtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccca 659
           | |||| | |||||| ||||||||||| ||||| ||  | ||||||||||| ||||||||
Sbjct: 287 attttcggttactccgcccatttcatatagtattcgttccggtttaacaacagctaccca 228

                                                   
Query: 660 atattcgggggacccctttccc-gagcccatacgtgtttc 698
           |||||||||| || |||||||| || ||||||||||||||
Sbjct: 227 atattcgggg-actcctttccccgaacccatacgtgtttc 189

---

>emb|AL663020.4|OSJN00220 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0049H08,
             complete sequence
          Length = 186642

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                                
Query: 221   tacgtacaattacagctcgaattacttcggatctttctagaggcatttggg 271
             |||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 94927 tacgtacaattacagctcaaattacttcggatctttccagaggcatttggg 94877

---

>dbj|AB077439.1| Sophora alopecuroides plastid DNA, intron region
          Length = 569

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 139/171 (81%)
 Strand = Plus / Minus

                                                                       
Query: 539 gaataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagcta 598
           |||| |||||| ||||||| ||||||||    || ||||| || ||||||  ||||||||
Sbjct: 384 gaatgaattgagttcgtataggcattttcgatgctgctattgacatagcttttctagcta 325

                                                                       
Query: 599 cagtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccc 658
            |||||| || || ||   |||||||||||||||    || |||||||| || |||||||
Sbjct: 324 tagtttctgagaccccattcatttcataaagtattttgccgggtttaacgacagctaccc 265

                                                              
Query: 659 aatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 709
           |||||||||| || ||||||||||| |||||||| ||||| || |||||||
Sbjct: 264 aatattcgggagatccctttcccgaacccatacgcgtttcggtaggtctta 214



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                               
Query: 389 catttaaaagggtctgaggttgaatcatattatttt 424
           ||||||||||||||||||||||||||||||||||||
Sbjct: 561 catttaaaagggtctgaggttgaatcatattatttt 526

---

>gb|M60180.1|OBECPRPB O.ammophila ribosomal protein L14 and S8 (rpl14, rps8) genes, 5'
           end and 3' end
          Length = 625

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/94 (87%), Gaps = 1/94 (1%)
 Strand = Plus / Plus

                                                                       
Query: 44  ttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcct 103
           ||||||||| |||||  ||||||||||||||||| || ||| | || ||||||||||| |
Sbjct: 524 ttataatacctcaggt-gctaatgaaactattttagtgaaacttaactctctcaattcgt 582

                                             
Query: 104 cggcaatcgcgccaaaaactcgagttccttttgg 137
            ||||||||| ||||||||||| |||||||||||
Sbjct: 583 gggcaatcgcaccaaaaactcgggttccttttgg 616

---

>dbj|AB062415.1| Cistanche tubulosa chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 484

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 130/159 (81%)
 Strand = Plus / Minus

                                                                       
Query: 540 aataaattgacttcgtatgggcattttactggccgctatggagatagctgctctagctac 599
           |||||||||| ||||||| ||||||||    || |||||  | ||||||  |||||||| 
Sbjct: 347 aataaattgagttcgtataggcatttttgatgctgctattaaaatagctcgtctagctat 288

                                                                       
Query: 600 agtttcagatactccccccatttcataaagtatacgacctggtttaacaacggctaccca 659
           | |||| | |||||| | ||||||||| ||||| ||    ||||||||||| ||||||||
Sbjct: 287 attttcggttactccgctcatttcatatagtattcgtttcggtttaacaacagctaccca 228

                                                  
Query: 660 atattcgggggacccctttcccgagcccatacgtgtttc 698
           |||||||||||| || || ||||| ||||||||||||||
Sbjct: 227 atattcgggggatcctttccccgaacccatacgtgtttc 189

---

>dbj|AB116627.1| Cistanche sinensis chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds, strain: CsiCn/2
          Length = 498

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                       
Query: 609 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
           |||||| ||||||||||| |||||  |  ||||||||||||| |||||||||||||| ||
Sbjct: 278 tactccacccatttcatatagtatttgtgctggtttaacaacagctacccaatattcagg 219

                                         
Query: 669 ggacccctttcccgagcccatacgtgtttc 698
           ||| || || ||||| ||||||||||||||
Sbjct: 218 ggatcctttccccgaacccatacgtgtttc 189

---

>dbj|AB116626.1| Cistanche sinensis chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds, strain: CsiCn/1
          Length = 498

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                       
Query: 609 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
           |||||| ||||||||||| |||||  |  ||||||||||||| |||||||||||||| ||
Sbjct: 278 tactccacccatttcatatagtatttgtgctggtttaacaacagctacccaatattcagg 219

                                         
Query: 669 ggacccctttcccgagcccatacgtgtttc 698
           ||| || || ||||| ||||||||||||||
Sbjct: 218 ggatcctttccccgaacccatacgtgtttc 189

---

>dbj|AB087470.1| Anthoceros formosae chloroplast rpl16 mRNA for ribosomal protein
           L16, complete cds
          Length = 411

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 78/90 (86%)
 Strand = Plus / Plus

                                                                       
Query: 609 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
           |||||| || || ||||||||||| | |  |||||||||||||| ||||||| |||| ||
Sbjct: 85  tactccacctatctcataaagtatcctatttggtttaacaacggatacccaaaattcagg 144

                                         
Query: 669 ggacccctttcccgagcccatacgtgtttc 698
           ||| ||||||||||| ||||||||||||||
Sbjct: 145 ggaaccctttcccgaacccatacgtgtttc 174

---

>dbj|AB112070.1| Scutellaria incana chloroplast rpl16 gene for ribosomal protein
           large subunit 16, partial cds
          Length = 485

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 98/117 (83%)
 Strand = Plus / Minus

                                                                       
Query: 593 tagctacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacgg 652
           |||||| | |||||| |||||| |||||||| || ||||| |  || ||||||||||| |
Sbjct: 294 tagctatattttcagttactccacccatttcgtatagtattctccccggtttaacaacag 235

                                                                    
Query: 653 ctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggtctta 709
           ||||||||||||| ||||| || || ||||| |||| |||||||||||  |||||||
Sbjct: 234 ctacccaatattcaggggatcctttccccgaacccaaacgtgtttccgcaggtctta 178

---

>dbj|AB087469.1| Anthoceros formosae chloroplast rpl14 mRNA for ribosomal protein
           L14, complete cds
          Length = 460

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 348 tcgaatacacatcaattttcgagctccactattgtctgctacatttaaa 396
           |||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 322 tcgaatacacatcagttttcgagctccactgttgtctgctacatttaaa 370



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 210 ttctttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcat 266
           ||||||||| ||||||||||||||||||| || |||||| ||| ||| |||||||||
Sbjct: 187 ttctttacaagtacgtacaattacagctctaactacttctgatttttttagaggcat 243



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 ccaaaaactcgagttccttt 134
           ||||||||||||||||||||
Sbjct: 92  ccaaaaactcgagttccttt 111

---

>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome
          Length = 161162

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                               
Query: 348    tcgaatacacatcaattttcgagctccactattgtctgctacatttaaa 396
              |||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 100021 tcgaatacacatcagttttcgagctccactgttgtctgctacatttaaa 100069



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                          
Query: 639    tggtttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
              |||||||||||||| ||||||| |||| ||||| ||||||||||| ||||||||||||||
Sbjct: 100421 tggtttaacaacggatacccaaaattcaggggaaccctttcccgaacccatacgtgtttc 100480



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                      
Query: 210   ttctttacatgtacgtacaattacagctcgaattacttcggatctttctagaggcat 266
             ||||||||| ||||||||||||||||||| || |||||| ||| ||| |||||||||
Sbjct: 99886 ttctttacaagtacgtacaattacagctctaactacttctgatttttttagaggcat 99942



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   ccaaaaactcgagttccttt 134
             ||||||||||||||||||||
Sbjct: 99791 ccaaaaactcgagttccttt 99810

---

>gb|M80799.1|VIRCPRPL Vigna unguiculata chloroplast ribosomal protein (L16 and L14)
           genes, 3' and 5' end respectively
          Length = 1268

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                       
Query: 609 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
           |||||| |||||||||||||||||    || ||||||||||| |||||||||||||||||
Sbjct: 921 tactccacccatttcataaagtattttcccaggtttaacaacagctacccaatattcggg 862

                                                    
Query: 669 ggacccctttcccgagcccatacgtgtttccgtgggtctta 709
             | || ||||| || |||||||||||||| || |||||||
Sbjct: 861 aaatccttttcctgaacccatacgtgtttcagtaggtctta 821



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 116/143 (81%), Gaps = 3/143 (2%)
 Strand = Plus / Minus

                                                                        
Query: 282  tttgattacagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcc 341
            ||||||||||||||||| ||  || ||||||  |||||||||  |||||| |||   |||
Sbjct: 1258 tttgattacagcaacaacaatgtcgccaatataagcatatcgtcgattactagc---tcc 1202

                                                                        
Query: 342  tatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggt 401
            || || |||||||||||||| ||  || ||||| || || || |||||||| ||| | ||
Sbjct: 1201 taggattcgaatacacatcagttcacgtgctccgctgttatccgctacattcaaatgagt 1142

                                   
Query: 402  ctgaggttgaatcatattatttt 424
             |||||||||||||||| |||||
Sbjct: 1141 ttgaggttgaatcatatcatttt 1119

---

>gb|M60179.1|OBECPRPA O.ammophila ribosomal protein L14 and L16 (rpl14, rpl16) genes, 3'
           end and 5' end
          Length = 542

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 112/135 (82%), Gaps = 3/135 (2%)
 Strand = Plus / Plus

                                                                       
Query: 290 cagcaacaataacatcaccaatacgagcatatcgctgattaccagcagctcctatgactc 349
           ||||||||||||  ||||| ||| ||||||||||  |||||| |||   ||| |||| ||
Sbjct: 1   cagcaacaataatgtcaccgatatgagcatatcgacgattactagc---tccgatgattc 57

                                                                       
Query: 350 gaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggtt 409
           |||||||||| |||| |||||| ||||| || || || ||||| ||| |||| |||||||
Sbjct: 58  gaatacacattaattctcgagccccactgttatccgcgacattcaaacgggtttgaggtt 117

                          
Query: 410 gaatcatattatttt 424
           ||||||||| |||||
Sbjct: 118 gaatcatatcatttt 132



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 610 actccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggg 669
           ||||| |||||||||||||| || | ||| ||||| || || ||||||||||||||||||
Sbjct: 351 actccacccatttcataaaggattctacccggtttgacgacagctacccaatattcgggg 410

                                        
Query: 670 gacccctttcccgagcccatacgtgtttc 698
              || || ||||| ||||||||||||||
Sbjct: 411 tttcctttacccgaacccatacgtgtttc 439

---

>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome
          Length = 122890

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 97/116 (83%)
 Strand = Plus / Plus

                                                                         
Query: 583   atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 642
             |||||||||||||| ||| |||||| |||||| |  |||||||| | ||| | |||||| 
Sbjct: 80507 atagctgctctagcaacactttcaggtactccgcttatttcatataatattctacctggc 80566

                                                                     
Query: 643   ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
             |||||||| | |||||||||||| || || || ||||| || ||||||||||||||
Sbjct: 80567 ttaacaacagatacccaatattctggtgaaccttttcctgaacccatacgtgtttc 80622



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 114/136 (83%), Gaps = 3/136 (2%)
 Strand = Plus / Plus

                                                                         
Query: 43    tttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcc 102
             ||||||||||||||||  ||||| ||||||||||| ||||||||  |||| |  ||||| 
Sbjct: 79910 tttataatacttcaggt-gctaacgaaactattttagtaaaattagattcacgtaattc- 79967

                                                                         
Query: 103   tcg-gcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataac 161
             ||| ||||  | ||||||||||||||||||||| || || |||| ||||| ||| |||||
Sbjct: 79968 tcgtgcaacagggccaaaaactcgagttcctttaggatttccttcttgattaataataac 80027

                             
Query: 162   cgcagcattgtcatca 177
              |||||||| ||||||
Sbjct: 80028 tgcagcattatcatca 80043



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                         
Query: 352   atacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttga 411
             |||||||| ||||| || ||||||||||| || ||||||||||||   || |||||||||
Sbjct: 80215 atacacattaatttgcgcgctccactattatcagctacatttaaataagtttgaggttga 80274

                  
Query: 412   atcat 416
             |||||
Sbjct: 80275 atcat 80279

---

>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome
          Length = 165372

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 106/127 (83%), Gaps = 1/127 (0%)
 Strand = Plus / Minus

                                                                         
Query: 51    acttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcctcggcaat 110
             |||||||| |||||| ||||||||||| |||||||| || |||||||||||   ||||| 
Sbjct: 41481 acttcagg-agctaaagaaactattttagtaaaatttaagtctctcaattctctggcaac 41423

                                                                         
Query: 111   cgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcatt 170
              |  ||||||||||| |||||| |||| ||||||| |||||  || | ||||||||||||
Sbjct: 41422 tggaccaaaaactcgtgttcctcttggattgccttcttgattgatgacaaccgcagcatt 41363

                    
Query: 171   gtcatca 177
              ||||||
Sbjct: 41362 atcatca 41356



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                         
Query: 349   cgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggt 408
             ||||||||||| |  ||||||||||| || ||||| ||||||||||||   | |||||||
Sbjct: 41187 cgaatacacatgagctttcgagctccgctgttgtcggctacatttaaataagactgaggt 41128

                     
Query: 409   tgaatcat 416
             ||||||||
Sbjct: 41127 tgaatcat 41120



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 618   catttcataaagtatacgacctggtttaacaacggctacccaatattc 665
             |||||| |||||||| |  |||||||| ||||| ||||||||||||||
Sbjct: 40947 catttcgtaaagtattcttcctggttttacaactgctacccaatattc 40900

---

>emb|AL662985.3|OSJN00189 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095H06,
             complete sequence
          Length = 126447

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 73/84 (86%), Gaps = 4/84 (4%)
 Strand = Plus / Plus

                                                                         
Query: 212   ctttacatgtacgtacaattacagctcgaattact----tcggatctttctagaggcatt 267
             ||||||||||||||||||||||||||||  |||||    || ||||||||||||||||||
Sbjct: 89363 ctttacatgtacgtacaattacagctcgtcttacttctgtctgatctttctagaggcatt 89422

                                     
Query: 268   tggggcaatgcgtctttgattaca 291
             | ||||| ||| |||||| |||||
Sbjct: 89423 ttgggcactgcttctttggttaca 89446

---

>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA
          Length = 121024

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                         
Query: 339   tcctatgactcgaatacacatcaattttcgagctccactattgtctgctacatttaaaag 398
             |||||| |||||||| ||||| | |||||||||||||||||| ||||| |||||||||  
Sbjct: 76544 tcctataactcgaatgcacattagttttcgagctccactattatctgcaacatttaaata 76603

                               
Query: 399   ggtctgaggttgaatcat 416
              || ||||||||||||||
Sbjct: 76604 agtttgaggttgaatcat 76621



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 113/137 (82%), Gaps = 1/137 (0%)
 Strand = Plus / Plus

                                                                         
Query: 41    tatttataatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaatt 100
             ||||||||| ||||| || |||||| ||||||||||| ||||||||  ||||||| ||||
Sbjct: 76250 tatttataaaacttctgg-agctaacgaaactattttagtaaaattagattctcttaatt 76308

                                                                         
Query: 101   cctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataa 160
             |    ||||| |  ||||||||||||||||||||||| || |||| ||||| ||| | ||
Sbjct: 76309 ctctagcaattggaccaaaaactcgagttccttttggatttccttcttgattaataacaa 76368

                              
Query: 161   ccgcagcattgtcatca 177
             | || ||||| ||||||
Sbjct: 76369 ctgctgcattatcatca 76385



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 208   aattctttacatgtacgtacaattacagctc 238
             ||||||||||| |||||||||||||||||||
Sbjct: 76416 aattctttacacgtacgtacaattacagctc 76446



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 89/110 (80%)
 Strand = Plus / Plus

                                                                         
Query: 589   gctctagctacagtttcagatactccccccatttcataaagtatacgacctggtttaaca 648
             |||||||| | | |||||||||| || |  ||||||||||||||    || |||||||| 
Sbjct: 76804 gctctagcaatattttcagatacgccactaatttcataaagtatttttccaggtttaact 76863

                                                               
Query: 649   acggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
             || |||||||||||||| || || || || ||||| ||||| ||||||||
Sbjct: 76864 acagctacccaatattctggagatcctttacccgatcccattcgtgtttc 76913

---

>dbj|AP004038.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1004_H01
          Length = 121377

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                          
Query: 99     ttcctcggcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattat 158
              ||||||||| |||| ||||||||| |||||||||||||| || | ||||||| |||| ||
Sbjct: 117502 ttcctcggcgatcgtgccaaaaacgcgagttccttttggatttcttttttgaccaatgat 117561

                                
Query: 159    aaccgcagcattgtcatc 176
              |||||  |||||||||||
Sbjct: 117562 aaccgttgcattgtcatc 117579

---

>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome
          Length = 138829

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                         
Query: 348   tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 407
             |||||||||||||||||||||||||||||| ||||||| ||| ||||||    | |||||
Sbjct: 79713 tcgaatacacatcaattttcgagctccactgttgtctgttacttttaaataactttgagg 79772

                      
Query: 408   ttgaatcat 416
             |||||||||
Sbjct: 79773 ttgaatcat 79781



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                         
Query: 619   atttcataaagtatacgacctggtttaacaacggctacccaatattcgggggaccccttt 678
             |||||||| ||||| ||||||  |||||| || |||||||||||||| || || || |||
Sbjct: 80009 atttcatagagtattcgaccttttttaactacagctacccaatattctggagatcctttt 80068

                                 
Query: 679   cccgagcccatacgtgtttc 698
             || || ||||||||||||||
Sbjct: 80069 ccagatcccatacgtgtttc 80088

---

>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0506A10
          Length = 145265

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 101/124 (81%), Gaps = 8/124 (6%)
 Strand = Plus / Minus

                                                                          
Query: 115    ccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgcagcattgtca 174
              ||||||||||||||||||||||| || |||| ||||| ||| | |||||        |||
Sbjct: 127299 ccaaaaactcgagttccttttggatttccttcttgattaatgacaaccg--------tca 127248

                                                                          
Query: 175    tcatagcggattattataccgtcttcgcatttgaattctttacatgtacgtacaattaca 234
              ||||| || ||||| |||||||  || | ||||| |||||||||||||||||||||||| 
Sbjct: 127247 tcatatcgtattatcataccgttgtcacgtttgagttctttacatgtacgtacaattact 127188

                  
Query: 235    gctc 238
              ||||
Sbjct: 127187 gctc 127184



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 115    ccaaaaactcgagttccttttgggttgcctttttgat 151
              ||||||||||||||||||||||| || |||| |||||
Sbjct: 126033 ccaaaaactcgagttccttttggatttccttcttgat 125997



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 115    ccaaaaactcgagttccttttgggttgcctttttgat 151
              ||||||||||||||||||||||| || |||| |||||
Sbjct: 121959 ccaaaaactcgagttccttttggatttccttcttgat 121923

---

>dbj|AB077440.1| Incarvillea potaninii plastid DNA, intron region
          Length = 536

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                       
Query: 609 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
           |||||| ||||||||||| ||||| || || ||||||||||| |||||||| ||||| ||
Sbjct: 313 tactccacccatttcatatagtattcgccccggtttaacaacagctacccagtattcagg 254

                                         
Query: 669 ggacccctttcccgagcccatacgtgtttc 698
           |   || || ||||| ||||||||||||||
Sbjct: 253 gtttcctttccccgaacccatacgtgtttc 224



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 29/30 (96%), Gaps = 1/30 (3%)
 Strand = Plus / Minus

                                         
Query: 389 catttaaaagggtctgaggttgaatcatat 418
           |||||||||||| |||||||||||||||||
Sbjct: 528 catttaaaaggg-ctgaggttgaatcatat 500

---

>dbj|AB077334.1| Zygophyllum pterocarpum plastid DNA, intron region
          Length = 553

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                       
Query: 609 tactccccccatttcataaagtatacgacctggtttaacaacggctacccaatattcggg 668
           |||||| | ||||||||||||||| | ||| |||||||| || |  ||||||||||| ||
Sbjct: 314 tactccactcatttcataaagtatcctaccaggtttaaccacagagacccaatattctgg 255

                                         
Query: 669 ggacccctttcccgagcccatacgtgtttc 698
            || || |||||||| ||||||||||||||
Sbjct: 254 agatccttttcccgaacccatacgtgtttc 225



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 29/30 (96%), Gaps = 1/30 (3%)
 Strand = Plus / Minus

                                         
Query: 389 catttaaaagggtctgaggttgaatcatat 418
           |||||||||||| |||||||||||||||||
Sbjct: 545 catttaaaaggg-ctgaggttgaatcatat 517

---

>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome
          Length = 154373

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 49/53 (92%), Gaps = 1/53 (1%)
 Strand = Plus / Minus

                                                                 
Query: 43   tttataatacttcaggnagctaatgaaactattttggtaaaattcaattctct 95
            |||||||||||||||| ||| |||||||||||||| |||||||| ||||||||
Sbjct: 5586 tttataatacttcagg-agccaatgaaactattttagtaaaattgaattctct 5535



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                        
Query: 583  atagctgctctagctacagtttcagatactccccccatttcataaagtatacgacctggt 642
            |||||||||||||| | |||||| | ||  || || | |||||| ||||| | ||| |||
Sbjct: 4976 atagctgctctagcaatagtttctggtatcccacctacttcatagagtattctaccaggt 4917

                                                                    
Query: 643  ttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            |||||||| | |||||||||||| ||||| || ||||| || |||||||| |||||
Sbjct: 4916 ttaacaacagatacccaatattctggggatccttttcctgaacccatacgcgtttc 4861



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                        
Query: 348  tcgaatacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgagg 407
            ||||||||||||   ||||  ||||||||| |||||||||||||| |||   || |||||
Sbjct: 5285 tcgaatacacattggttttttagctccactgttgtctgctacattcaaatacgtttgagg 5226

                        
Query: 408  ttgaatcatatt 419
            ||||||||||||
Sbjct: 5225 ttgaatcatatt 5214

---

>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome
          Length = 161452

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                 
Query: 346    actcgaatacacatcaattttcgagctccactattgtctgctacatttaaa 396
              |||||||||||||| ||||| ||||| |||||||| || ||||||||||||
Sbjct: 140455 actcgaatacacattaatttgcgagcaccactattatcagctacatttaaa 140505

---

>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1175_B01
          Length = 96191

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 80    taaaattcaattctctcaattcctcggcaatcgcgccaaaaac 122
             ||||||||||| ||||| |||||||||| ||||||||||||||
Sbjct: 20850 taaaattcaatactctcgattcctcggcgatcgcgccaaaaac 20808

---

>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome
          Length = 151933

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                         
Query: 352   atacacatcaattttcgagctccactattgtctgctacatttaaaagggtctgaggttga 411
             |||||||| |||||||| ||||||||||| ||||| || |||| |   || |||||||||
Sbjct: 16479 atacacattaattttcgtgctccactattatctgcgacgtttacatatgtttgaggttga 16420

                      
Query: 412   atcatatta 420
             |||||||||
Sbjct: 16419 atcatatta 16411

---

>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome
          Length = 150568

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 349   cgaatacacatcaattttcgagctccactattgtctgctacatttaaa 396
             |||||||||||||| || |||||||| ||||| |||||||||| ||||
Sbjct: 76668 cgaatacacatcaacttgcgagctccgctattatctgctacatctaaa 76715

---

>gb|DQ069422.1| Ginkgo biloba ribosomal protein L14 (rpl14) gene, partial cds;
           chloroplast
          Length = 366

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 108/131 (82%), Gaps = 3/131 (2%)
 Strand = Plus / Minus

                                                                       
Query: 47  taatacttcaggnagctaatgaaactattttggtaaaattcaattctctcaattcctcg- 105
           ||||||||| || ||| |||| ||||||||| || ||||| |||| ||||||||| ||| 
Sbjct: 366 taatacttc-gggagccaatggaactatttttgtgaaattaaattgtctcaattc-tcga 309

                                                                       
Query: 106 gcaatcgcgccaaaaactcgagttccttttgggttgcctttttgatcaattataaccgca 165
           ||||  |  |||||||||||||||||||| || || ||||  |||||||| | ||| || 
Sbjct: 308 gcaactgaaccaaaaactcgagttcctttcggatttccttcctgatcaatgacaactgct 249

                      
Query: 166 gcattgtcatc 176
           |||||||||||
Sbjct: 248 gcattgtcatc 238

---

>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome
          Length = 203828

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 349   cgaatacacatcaattttcgagctccactattgtctgctacatttaaa 396
             ||||||||||| ||||  ||||| |||||||| |||||||||||||||
Sbjct: 28989 cgaatacacattaattcacgagcaccactattatctgctacatttaaa 28942



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 212   ctttacatgtacgtacaattacagctcg 239
             |||||| |||||||||||| ||||||||
Sbjct: 29123 ctttacgtgtacgtacaataacagctcg 29096

---

>emb|X14062.1|CHCRL14 Chlamydomonas reinhardtii plasti gene for ribosomal protein L14
          Length = 988

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 349 cgaatacacatcaattttcgagctccactattgtctgctacatttaaa 396
           ||||||||||| ||||  ||||| |||||||| |||||||||||||||
Sbjct: 588 cgaatacacattaattcacgagcaccactattatctgctacatttaaa 541



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 212 ctttacatgtacgtacaattacagctcg 239
           |||||| |||||||||||| ||||||||
Sbjct: 722 ctttacgtgtacgtacaataacagctcg 695

---

>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome
          Length = 144170

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 649   acggctacccaatattcgggggacccctttcccgagcccatacgtgtttccgtgggtct 707
             |||| ||||| |||||| | |||||| ||||| || |||||||||||||||| ||||||
Sbjct: 73837 acggatacccgatattccgtggacccttttcctgaacccatacgtgtttccgcgggtct 73895

---

>gb|AY224188.1| Medicago truncatula adenosylhomocysteinase (AHC1) gene, complete cds
          Length = 99431

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                         
Query: 616   cccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggggacccc 675
             |||||||||||||||||    || |||||||| || ||||||||||||||||| ||  | 
Sbjct: 75772 cccatttcataaagtattttgccgggtttaacgacagctacccaatattcgggagattct 75831

                                    
Query: 676   tttcccgagcccatacgtgtttc 698
             ||||| || |||||||| |||||
Sbjct: 75832 tttcctgaacccatacgcgtttc 75854

---

>gb|M30487.1|CPACYRP Cyanophora paradoxa ribosomal protein l22 (rpl22) gene, partial cds;
            ribosomal protein s3 (rps3), ribosomal protein l16
            (rpl16), ribosomal protein l7 (rpl7), ribosomal protein
            l14 (rpl14), ribosomal protein l5 (rpl5), ribosomal
            protein s8 (rps8), ribosomal protein l6 (rpl6), ribosomal
            protein l18 (rpl18), ribosomal protein s5 (rps5), and
            ribosomal protein secY (secY) genes, complete cds; and
            ORF gene, partial cds
          Length = 6468

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 346  actcgaatacacatcaattttcgagctccactatt 380
            |||||||||||||| ||||| ||||||||||||||
Sbjct: 1744 actcgaatacacattaatttacgagctccactatt 1710



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 288  tacagcaacaataacatcaccaatacgagcata 320
            |||||| ||||| ||||||||||| ||||||||
Sbjct: 1799 tacagcgacaattacatcaccaattcgagcata 1767

---

>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137492

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 71    ctattttggtaaaattcaattctctcaattc 101
             ||||||| |||||||||||||||||||||||
Sbjct: 45211 ctattttagtaaaattcaattctctcaattc 45181

---

>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome
          Length = 135599

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 346   actcgaatacacatcaattttcgagctccactatt 380
             |||||||||||||| ||||| ||||||||||||||
Sbjct: 52478 actcgaatacacattaatttacgagctccactatt 52512



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 288   tacagcaacaataacatcaccaatacgagcata 320
             |||||| ||||| ||||||||||| ||||||||
Sbjct: 52423 tacagcgacaattacatcaccaattcgagcata 52455

---

>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                           
Query: 637     cctggtttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtt 696
               ||||||||||| || |||||||||||||| || || ||||| || || |||||||| |||
Sbjct: 3265454 cctggtttaactactgctacccaatattctggagaacccttaccagatcccatacgggtt 3265513

                 
Query: 697     tc 698
               ||
Sbjct: 3265514 tc 3265515

---

>gb|AF050665.1|AF050665 Spirogyra maxima tRNA-Ile gene, complete sequence; and ribosomal
            protein L23 (rpl23), ribosomal protein L2 (rpl2),
            ribosomal protein S19 (rps19), ribosomal protein L22
            (rpl22), ribosomal protein S3 (rps3), ribosomal protein
            L16 (rpl16), ribosomal protein L14 (rpl14), ribosomal
            protein S8 (rps8), initiation factor A (infA), ribosomal
            protein L36 (rpl36), ribosomal protein S11 (rps11), and
            RNA polymerase alpha subunit (rpoA) genes, complete cds,
            chloroplast genes for chloroplast products
          Length = 8794

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 637  cctggtttaacaacggctacccaatattcgggggacccctttcccgagcccatacgtgtt 696
            |||||||| ||||| |||||||||||||| || |  ||||| || || ||||||||||||
Sbjct: 4918 cctggttttacaactgctacccaatattctggagcacccttaccagatcccatacgtgtt 4859

              
Query: 697  tc 698
            ||
Sbjct: 4858 tc 4857



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 349  cgaatacacatcaattttcgagctccact 377
            ||||||||||| ||||| |||||||||||
Sbjct: 5290 cgaatacacattaatttacgagctccact 5262

---

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                       
Query: 352    atacacatcaattttcgagctccactattgtctgctacatt 392
              |||||||||||||| ||||| || ||||||||||| |||||
Sbjct: 879333 atacacatcaatttacgagcgccgctattgtctgcgacatt 879293

---

>gb|AC144759.11| Medicago truncatula clone mth2-15b21, complete sequence
          Length = 124666

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 76/93 (81%)
 Strand = Plus / Plus

                                                                         
Query: 617   ccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggggacccct 676
             ||||||||||||||||   ||| | |||||  || ||||||||||||||||| || || |
Sbjct: 19092 ccatttcataaagtattttaccggatttaatgacagctacccaatattcgggagatccgt 19151

                                              
Query: 677   ttcccgagcccatacgtgtttccgtgggtctta 709
             ||||| | |||||||  ||||| || |||||||
Sbjct: 19152 ttcccaaacccatacacgtttcagtaggtctta 19184

---

>gb|AC123596.13| Medicago truncatula clone mth1-17n5, complete sequence
          Length = 120055

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 76/93 (81%)
 Strand = Plus / Plus

                                                                         
Query: 617   ccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggggacccct 676
             ||||||||||||||||   ||| | |||||  || ||||||||||||||||| || || |
Sbjct: 16435 ccatttcataaagtattttaccggatttaatgacagctacccaatattcgggagatccgt 16494

                                              
Query: 677   ttcccgagcccatacgtgtttccgtgggtctta 709
             ||||| | |||||||  ||||| || |||||||
Sbjct: 16495 ttcccaaacccatacacgtttcagtaggtctta 16527

---

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                        
Query: 352     atacacatcaattttcgagctccactattgtctgctacatt 392
               |||||||||||||| ||||| || ||||||||||| |||||
Sbjct: 5047012 atacacatcaatttacgagcgccgctattgtctgcgacatt 5047052

---

>emb|CT025839.2| Medicago truncatula chromosome 5 clone mth4-19c21, COMPLETE SEQUENCE
          Length = 210117

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 76/93 (81%)
 Strand = Plus / Plus

                                                                         
Query: 617   ccatttcataaagtatacgacctggtttaacaacggctacccaatattcgggggacccct 676
             ||||||||||||||||   ||| | |||||  || ||||||||||||||||| || || |
Sbjct: 19098 ccatttcataaagtattttaccggatttaatgacagctacccaatattcgggagatccgt 19157

                                              
Query: 677   ttcccgagcccatacgtgtttccgtgggtctta 709
             ||||| | |||||||  ||||| || |||||||
Sbjct: 19158 ttcccaaacccatacacgtttcagtaggtctta 19190

---

>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome
          Length = 157089

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                 
Query: 365   ttcgagctccactattgtctgctacatttaaaagggtctgaggttgaatcat 416
             |||||||||||||||| || ||||||||||||   |  ||||||||||||||
Sbjct: 94493 ttcgagctccactattatcggctacatttaaataagattgaggttgaatcat 94442

---

>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0007C02, complete sequence
          Length = 148265

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 296   caataacatcaccaatacgagcatatcgctgattaccagc 335
             ||||||| ||||||||| |||||||||  |||||||||||
Sbjct: 98741 caataacgtcaccaatatgagcatatcagtgattaccagc 98780

---

>ref|NM_128441.3| Arabidopsis thaliana structural constituent of ribosome AT2G28820
           mRNA, complete cds
          Length = 1156

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 286 attacagcaacaataacatcaccaatacgagcata 320
           ||||| ||||||| ||||||||||||| |||||||
Sbjct: 999 attacggcaacaacaacatcaccaatatgagcata 965



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 71/87 (81%)
 Strand = Plus / Minus

                                                                       
Query: 574 gctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtata 633
           ||||| || |||||| ||||||||||  |||| || || || |||||||||||||  || 
Sbjct: 857 gctatagaaatagcttctctagctactttttcggaaacaccacccatttcataaatgatt 798

                                      
Query: 634 cgacctggtttaacaacggctacccaa 660
             |||||||||||| || |||||||||
Sbjct: 797 ttacctggtttaaccacagctacccaa 771

---

>emb|AL359081.10| Human DNA sequence from clone RP11-541F9 on chromosome 1, complete
             sequence
          Length = 109288

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 65    atgaaactattttggtaaaattcaatt 91
             |||||||||||||||||| ||||||||
Sbjct: 91500 atgaaactattttggtaacattcaatt 91474

---

>gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map mi54, complete
             sequence
          Length = 107097

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 71/87 (81%)
 Strand = Plus / Plus

                                                                         
Query: 574   gctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtata 633
             ||||| || |||||| ||||||||||  |||| || || || |||||||||||||  || 
Sbjct: 38231 gctatagaaatagcttctctagctactttttcggaaacaccacccatttcataaatgatt 38290

                                        
Query: 634   cgacctggtttaacaacggctacccaa 660
               |||||||||||| || |||||||||
Sbjct: 38291 ttacctggtttaaccacagctacccaa 38317



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 286   attacagcaacaataacatcaccaatacgagcata 320
             ||||| ||||||| ||||||||||||| |||||||
Sbjct: 38089 attacggcaacaacaacatcaccaatatgagcata 38123

---

>gb|AY219111.2| Arabidopsis thaliana hypothetical protein (At2g28820/F8N16.11) mRNA,
            complete cds
          Length = 1179

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 286  attacagcaacaataacatcaccaatacgagcata 320
            ||||| ||||||| ||||||||||||| |||||||
Sbjct: 1002 attacggcaacaacaacatcaccaatatgagcata 968



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 71/87 (81%)
 Strand = Plus / Minus

                                                                       
Query: 574 gctatggagatagctgctctagctacagtttcagatactccccccatttcataaagtata 633
           ||||| || |||||| ||||||||||  |||| || || || |||||||||||||  || 
Sbjct: 860 gctatagaaatagcttctctagctactttttcggaaacaccacccatttcataaatgatt 801

                                      
Query: 634 cgacctggtttaacaacggctacccaa 660
             |||||||||||| || |||||||||
Sbjct: 800 ttacctggtttaaccacagctacccaa 774

---

>dbj|AP000606.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MTO24
          Length = 82360

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 415   atattattttgatttcaatttgttatt 441
             |||||||||||||||||| ||||||||
Sbjct: 13778 atattattttgatttcaaattgttatt 13752

---

>gb|AC157473.1| Medicago truncatula chromosome 7 BAC clone mte1-11e4, complete sequence
          Length = 125310

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 390   atttaaaagggtctgaggttgaa 412
             |||||||||||||||||||||||
Sbjct: 65424 atttaaaagggtctgaggttgaa 65402

---

>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome
          Length = 70028

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 85/106 (80%)
 Strand = Plus / Plus

                                                                         
Query: 593   tagctacagtttcagatactccccccatttcataaagtatacgacctggtttaacaacgg 652
             |||||| | |||||| |||||| || |||||||| |||||  | || ||||||||||| |
Sbjct: 17523 tagctatattttcagttactccacctatttcatatagtattagtcccggtttaacaacag 17582

                                                           
Query: 653   ctacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
             ||||  ||||||   |||| || || || || ||||||||||||||
Sbjct: 17583 ctacaaaatatttatgggatcctttccctgaacccatacgtgtttc 17628

---

>gb|AC132335.3| Mus musculus BAC clone RP24-230C24 from chromosome 10, complete sequence
          Length = 180642

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 451    aaggatgaaagaaatattgtctttcc 476
              |||||||||||||||||| |||||||
Sbjct: 116209 aaggatgaaagaaatattttctttcc 116234

---

>dbj|AB025638.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWF20
          Length = 91193

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 417   attattttgatttcaatttgtt 438
             ||||||||||||||||||||||
Sbjct: 90746 attattttgatttcaatttgtt 90725

---

>gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosome 10, complete sequence
          Length = 217425

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 451    aaggatgaaagaaatattgtctttcc 476
              |||||||||||||||||| |||||||
Sbjct: 184750 aaggatgaaagaaatattttctttcc 184775

---

>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome
          Length = 2427734

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 130     ccttttgggttgcctttttga 150
               |||||||||||||||||||||
Sbjct: 1617545 ccttttgggttgcctttttga 1617565

---

>emb|CT009479.4| M.truncatula DNA sequence from clone MTH2-164E3 on chromosome 3,
             complete sequence
          Length = 133351

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 440   tttcaatgcaaaaggatgaaagaaa 464
             ||||||| |||||||||||||||||
Sbjct: 58265 tttcaatacaaaaggatgaaagaaa 58241

---

>emb|CR753838.10| Zebrafish DNA sequence from clone DKEY-189H5 in linkage group 5,
             complete sequence
          Length = 188660

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    atgaaactattttggtaaaat 85
             |||||||||||||||||||||
Sbjct: 13532 atgaaactattttggtaaaat 13552

---

>gb|AY115835.1| Pinus krempfii ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1114

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1104 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1060

---

>gb|AY115834.1| Pinus squamata ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

---

>gb|AY115833.1| Pinus gerardiana ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1119

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1109 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1065

---

>gb|AY115832.1| Pinus bungeana ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1119

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1109 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1065

---

>gb|AY115831.1| Pinus balfouriana specimen-voucher Kew1969.10666 California ribosomal
            protein L16 (rpl16) gene, partial cds; chloroplast gene
            for chloroplast product
          Length = 1110

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1100 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1056

---

>gb|AY115830.1| Pinus balfouriana specimen-voucher Olinecm11 California ribosomal
            protein L16 (rpl16) gene, partial cds; chloroplast gene
            for chloroplast product
          Length = 1110

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1100 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1056

---

>gb|AY115829.1| Pinus longaeva specimen-voucher Kew1972.6349 California ribosomal
            protein L16 (rpl16) gene, partial cds; chloroplast gene
            for chloroplast product
          Length = 1110

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1100 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1056

---

>gb|AY115828.1| Pinus longaeva specimen-voucher DSG3099 California ribosomal protein
            L16 (rpl16) gene, partial cds; chloroplast gene for
            chloroplast product
          Length = 1110

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1100 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1056

---

>gb|AY115827.1| Pinus aristata specimen-voucher Kew1992.747 Colorado ribosomal
            protein L16 (rpl16) gene, partial cds; chloroplast gene
            for chloroplast product
          Length = 1110

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1100 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1056

---

>gb|AY115826.1| Pinus aristata specimen-voucher DSG3299 Colorado ribosomal protein
            L16 (rpl16) gene, partial cds; chloroplast gene for
            chloroplast product
          Length = 1110

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1100 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1056

---

>gb|AY115825.1| Pinus nelsonii ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

---

>gb|AY115824.1| Pinus rzedowskii ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

---

>gb|AY115823.1| Pinus pinceana specimen-voucher DSG8899 Coahuila ribosomal protein
            L16 (rpl16) gene, partial cds; chloroplast gene for
            chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

---

>gb|AY115822.1| Pinus pinceana specimen-voucher DSG3998 Hidalgo ribosomal protein L16
            (rpl16) gene, partial cds; chloroplast gene for
            chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

---

>gb|AY115821.1| Pinus maximartinezii ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

---

>gb|AY115820.1| Pinus quadrifolia ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

---

>gb|AY115819.1| Pinus juarezensis specimen-voucher DSG1099 Baja California Norte
            ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

---

>gb|AY115818.1| Pinus juarezensis specimen-voucher DSG1499 Baja California Norte
            ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

---

>gb|AY115817.1| Pinus monophylla specimen-voucher DSG2399 California ribosomal
            protein L16 (rpl16) gene, partial cds; chloroplast gene
            for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

---

>gb|AY115816.1| Pinus monophylla specimen-voucher Kew1986.5767 California ribosomal
            protein L16 (rpl16) gene, partial cds; chloroplast gene
            for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

---

>gb|AY115815.1| Pinus discolor ribosomal protein L16 (rpl16) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

---

>gb|AY115814.1| Pinus johannis specimen-voucher DSG2001 San Luis Potosi ribosomal
            protein L16 (rpl16) gene, partial cds; chloroplast gene
            for chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

---

>gb|AY115813.1| Pinus johannis specimen-voucher DSG8199 Zacatecas ribosomal protein
            L16 (rpl16) gene, partial cds; chloroplast gene for
            chloroplast product
          Length = 1112

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1102 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1058

---

>gb|AY115812.1| Pinus catarinae specimen-voucher DSG1301 Nuevo Leon ribosomal protein
            L16 (rpl16) gene, partial cds; chloroplast gene for
            chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

---

>gb|AY115811.1| Pinus catarinae specimen-voucher DSG6899 Chapingo66 ribosomal protein
            L16 (rpl16) gene, partial cds; chloroplast gene for
            chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061

---

>gb|AY115810.1| Pinus remota specimen-voucher DSG801 Coahuila ribosomal protein L16
            (rpl16) gene, partial cds; chloroplast gene for
            chloroplast product
          Length = 1115

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 654  tacccaatattcgggggacccctttcccgagcccatacgtgtttc 698
            ||||||||||||||| || || || || || ||||||||||||||
Sbjct: 1105 tacccaatattcgggagatcctttcccggaacccatacgtgtttc 1061


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,722,935
Number of Sequences: 3902068
Number of extensions: 6722935
Number of successful extensions: 137477
Number of sequences better than 10.0: 314
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 134146
Number of HSP's gapped (non-prelim): 3156
length of query: 709
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 686
effective length of database: 17,143,297,704
effective search space: 11760302224944
effective search space used: 11760302224944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---