ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6j15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK073175.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 3e-61
2ref|NM_189405.1| Oryza sativa (japonica cultivar-group), predic... 206 7e-50
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
4dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
5gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.010
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.010
7gb|AC114634.14| Mus musculus chromosome 8, clone RP24-116E2, com... 44 0.60
8emb|BX323449.13| Zebrafish DNA sequence from clone DKEYP-115E12 ... 44 0.60
9emb|BX088572.25| Zebrafish DNA sequence from clone CH211-246K16 ... 44 0.60
10dbj|AB049578.1| Morus alba a-MPP mRNA for mitochondrial processi... 44 0.60
11emb|CR854945.5| Zebrafish DNA sequence from clone DKEY-155H10 in... 42 2.4
12emb|CR380839.1|PTB083D21 Pan troglodytes chromosome X BAC PTB-08... 42 2.4
13gb|AC023721.3| Drosophila melanogaster X BAC RP98-5L4 (Roswell P... 42 2.4
14gb|AC002387.3| Arabidopsis thaliana chromosome 2 clone F4L23 map... 42 2.4
15ref|NM_132566.1| Drosophila melanogaster CG2577-RA (CG2577), mRNA 42 2.4
16gb|AY089448.1| Drosophila melanogaster AT26486 full insert cDNA 42 2.4
17emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 2.4
18gb|AE003489.2| Drosophila melanogaster chromosome X, section 41 ... 42 2.4
19emb|BX855587.13| Zebrafish DNA sequence from clone DKEY-103L5 in... 42 2.4
20gb|AC122501.3| Mus musculus BAC clone RP24-410D23 from chromosom... 40 9.3
21gb|AC146502.2| Danio rerio clone CH211-262M17, complete sequence 40 9.3
22gb|BC020894.1| Homo sapiens cDNA clone MGC:24147 IMAGE:4702473, ... 40 9.3
23emb|AL031663.2|HS461P17 Human DNA sequence from clone RP3-461P17... 40 9.3
24emb|AL162422.10| Human DNA sequence from clone RP11-446F13 on ch... 40 9.3
25emb|AL603889.5| Mouse DNA sequence from clone RP23-407M20 on chr... 40 9.3
26emb|AL079350.1|ATT30C3 Arabidopsis thaliana DNA chromosome 4, BA... 40 9.3
27emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, ... 40 9.3
28emb|AL121806.2|DMBR42I17 Drosophila melanogaster BAC clone BACR4... 40 9.3
29emb|AL022197.2|ATM7J2 Arabidopsis thaliana DNA chromosome 4, P1 ... 40 9.3
30emb|CR385022.10| Zebrafish DNA sequence from clone CH211-63C12 i... 40 9.3
31gb|BC092830.1| Danio rerio zgc:110258, mRNA (cDNA clone MGC:1102... 40 9.3
32gb|AC064801.10| Homo sapiens chromosome 18, clone RP11-120K19, c... 40 9.3
33ref|NM_020193.3| Homo sapiens chromosome 11 open reading frame 3... 40 9.3
34emb|CR609463.1| full-length cDNA clone CS0DK006YE07 of HeLa cell... 40 9.3
35gb|AC104410.3| Drosophila melanogaster X BAC RP98-10H22 (Roswell... 40 9.3
36ref|XM_938134.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 9.3
37ref|XM_927542.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 9.3
38gb|AC092371.3| Homo sapiens chromosome 16 clone RP11-525J10, com... 40 9.3
39gb|AC134527.5| Mus musculus BAC clone RP24-502D8 from chromosome... 40 9.3
40ref|NM_001019908.1| Schizosaccharomyces pombe 972h- hypothetical... 40 9.3
41ref|NM_001017618.1| Danio rerio zgc:110258 (zgc:110258), mRNA 40 9.3
42gb|AC092136.3| Homo sapiens chromosome 16 clone RP11-299F9, comp... 40 9.3
43gb|AC005234.1| Homo sapiens BAC clone RP11-436H22 from 2, comple... 40 9.3
44gb|AF226047.1|AF226047 Homo sapiens GL002 (GL002) mRNA, complete... 40 9.3
45emb|BX647398.1|HSM807543 Homo sapiens mRNA; cDNA DKFZp686M14144 ... 40 9.3
46gb|AC123634.10| Mus musculus chromosome 3, clone RP24-434E24, co... 40 9.3
47emb|CR376851.5| Zebrafish DNA sequence from clone DKEY-48N5 in l... 40 9.3
48gb|AE003420.2| Drosophila melanogaster chromosome X, section 4 o... 40 9.3
49dbj|AP002884.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.3
50dbj|AP003165.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 9.3
51dbj|AP000779.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 9.3
52emb|AL441621.1|SPAC683 S.pombe chromosome I cosmid c683 40 9.3
53dbj|AB042297.1| Homo sapiens PTS gene for 6-pyruvoyltetrahydropt... 40 9.3
54emb|AL035331.1|DMC33C11 Drosophila melanogaster cosmid clone 33C11 40 9.3 
>dbj|AK073175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023J10, full
            insert sequence
          Length = 1746

 Score =  244 bits (123), Expect = 3e-61
 Identities = 312/375 (83%)
 Strand = Plus / Minus

                                                                        
Query: 243  aaccgcttgctaacaaattcgtacggaggaactttatcaacgtctccatagctagccatt 302
            |||| ||||| ||||||||| || ||||||||||||||||| |||||  | |||||||||
Sbjct: 1537 aacctcttgcaaacaaattcatatggaggaactttatcaacatctccccaactagccatt 1478

                                                                        
Query: 303  gtgggttgggaagataacaacatcttagaaaacgatgtgacgtcatttagggtcagttca 362
            |||||| | ||||| |||| | |||| | ||| | ||| |  |||| ||| |||| ||| 
Sbjct: 1477 gtgggtggtgaagacaacatcttcttggcaaaagctgttatatcatctagagtcatttcg 1418

                                                                        
Query: 363  tccatacactgaagaaaatgatcgataggcttcctgcaaccataagtcaaaagctgtcgc 422
            |||||||| ||||||||||| || | |||||||||||||||||||||||| | ||| | |
Sbjct: 1417 tccatacattgaagaaaatggtcaacaggcttcctgcaaccataagtcaatatctgcctc 1358

                                                                        
Query: 423  cctatatcttctgcaacaatcacccttgattcaagattcattaacacggatgaaatcgtc 482
            |||||||||||||||||||| ||||| |||||||||||||| | |||||  ||||| || 
Sbjct: 1357 cctatatcttctgcaacaattaccctggattcaagattcatcagcacggcagaaattgtt 1298

                                                                        
Query: 483  gagtttttcgcacgtctcagctcaacctccgtcacttgtccaggcgttgcaatagcaatc 542
            ||||||||||| |||  ||  ||||  || |||||||||||||| |||||||||||||||
Sbjct: 1297 gagtttttcgctcgtgccaattcaatgtctgtcacttgtccaggtgttgcaatagcaatc 1238

                                                                        
Query: 543  aattcctgcaccgcgacatcaacagcctttgcaacaaaatatggtggcgttgtcaaatag 602
            | ||| |    ||| | ||||||||||||||||||||||| ||  ||||| ||||| || 
Sbjct: 1237 agttcttttgtcgcaatatcaacagcctttgcaacaaaatctgaaggcgtggtcaagtaa 1178

                           
Query: 603  ataccaaagaggcca 617
            |||||||||||||||
Sbjct: 1177 ataccaaagaggcca 1163
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>ref|NM_189405.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1503

 Score =  206 bits (104), Expect = 7e-50
 Identities = 269/324 (83%)
 Strand = Plus / Minus

                                                                        
Query: 294  ctagccattgtgggttgggaagataacaacatcttagaaaacgatgtgacgtcatttagg 353
            ||||||||||||||| | ||||| |||| | |||| | ||| | ||| |  |||| ||| 
Sbjct: 1475 ctagccattgtgggtggtgaagacaacatcttcttggcaaaagctgttatatcatctaga 1416

                                                                        
Query: 354  gtcagttcatccatacactgaagaaaatgatcgataggcttcctgcaaccataagtcaaa 413
            |||| ||| |||||||| ||||||||||| || | |||||||||||||||||||||||| 
Sbjct: 1415 gtcatttcgtccatacattgaagaaaatggtcaacaggcttcctgcaaccataagtcaat 1356

                                                                        
Query: 414  agctgtcgccctatatcttctgcaacaatcacccttgattcaagattcattaacacggat 473
            | ||| | ||||||||||||||||||||| ||||| |||||||||||||| | |||||  
Sbjct: 1355 atctgcctccctatatcttctgcaacaattaccctggattcaagattcatcagcacggca 1296

                                                                        
Query: 474  gaaatcgtcgagtttttcgcacgtctcagctcaacctccgtcacttgtccaggcgttgca 533
            ||||| || ||||||||||| |||  ||  ||||  || |||||||||||||| ||||||
Sbjct: 1295 gaaattgttgagtttttcgctcgtgccaattcaatgtctgtcacttgtccaggtgttgca 1236

                                                                        
Query: 534  atagcaatcaattcctgcaccgcgacatcaacagcctttgcaacaaaatatggtggcgtt 593
            |||||||||| ||| |    ||| | ||||||||||||||||||||||| ||  ||||| 
Sbjct: 1235 atagcaatcagttcttttgtcgcaatatcaacagcctttgcaacaaaatctgaaggcgtg 1176

                                    
Query: 594  gtcaaatagataccaaagaggcca 617
            ||||| || |||||||||||||||
Sbjct: 1175 gtcaagtaaataccaaagaggcca 1152
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                                
Query: 395      cctgcaaccataagtcaaaagctgtcgccctatatcttctgcaacaat 442
                |||||||||||||||||| | ||| | |||||||||||||||||||||
Sbjct: 42610063 cctgcaaccataagtcaatatctgcctccctatatcttctgcaacaat 42610016



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                            
Query: 517      cttgtccaggcgttgcaatagcaatcaattcctgcaccgcgacatcaacagcctttgcaa 576
                |||||||||| |||||||||||||||| ||| |    ||| | |||||||||||||||||
Sbjct: 42609737 cttgtccaggtgttgcaatagcaatcagttcttttgtcgcaatatcaacagcctttgcaa 42609678

                      
Query: 577      caaaat 582
                ||||||
Sbjct: 42609677 caaaat 42609672



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 243      aaccgcttgctaacaaattcgtacggaggaactttatcaac 283
                |||| ||||| ||||||||| || |||||||||||||||||
Sbjct: 42610380 aacctcttgcaaacaaattcatatggaggaactttatcaac 42610340



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 85/105 (80%)
 Strand = Plus / Minus

                                                                            
Query: 294      ctagccattgtgggttgggaagataacaacatcttagaaaacgatgtgacgtcatttagg 353
                ||||||||||||||| | ||||| |||| | |||| | ||| | ||| |  |||| ||| 
Sbjct: 42610246 ctagccattgtgggtggtgaagacaacatcttcttggcaaaagctgttatatcatctaga 42610187

                                                             
Query: 354      gtcagttcatccatacactgaagaaaatgatcgataggcttcctg 398
                |||| ||| |||||||| ||||||||||| || | ||||||||||
Sbjct: 42610186 gtcatttcgtccatacattgaagaaaatggtcaacaggcttcctg 42610142



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                  
Query: 444      acccttgattcaagattcattaacacggatgaaatcgtcgagtttttcgc 493
                ||||| |||||||||||||| | |||||  ||||| || |||||||||||
Sbjct: 42609898 accctggattcaagattcatcagcacggcagaaattgttgagtttttcgc 42609849
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>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0458E05
          Length = 193577

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                              
Query: 395    cctgcaaccataagtcaaaagctgtcgccctatatcttctgcaacaat 442
              |||||||||||||||||| | ||| | |||||||||||||||||||||
Sbjct: 130946 cctgcaaccataagtcaatatctgcctccctatatcttctgcaacaat 130899



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                          
Query: 517    cttgtccaggcgttgcaatagcaatcaattcctgcaccgcgacatcaacagcctttgcaa 576
              |||||||||| |||||||||||||||| ||| |    ||| | |||||||||||||||||
Sbjct: 130620 cttgtccaggtgttgcaatagcaatcagttcttttgtcgcaatatcaacagcctttgcaa 130561

                    
Query: 577    caaaat 582
              ||||||
Sbjct: 130560 caaaat 130555



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                       
Query: 243    aaccgcttgctaacaaattcgtacggaggaactttatcaac 283
              |||| ||||| ||||||||| || |||||||||||||||||
Sbjct: 131263 aacctcttgcaaacaaattcatatggaggaactttatcaac 131223



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 85/105 (80%)
 Strand = Plus / Minus

                                                                          
Query: 294    ctagccattgtgggttgggaagataacaacatcttagaaaacgatgtgacgtcatttagg 353
              ||||||||||||||| | ||||| |||| | |||| | ||| | ||| |  |||| ||| 
Sbjct: 131129 ctagccattgtgggtggtgaagacaacatcttcttggcaaaagctgttatatcatctaga 131070

                                                           
Query: 354    gtcagttcatccatacactgaagaaaatgatcgataggcttcctg 398
              |||| ||| |||||||| ||||||||||| || | ||||||||||
Sbjct: 131069 gtcatttcgtccatacattgaagaaaatggtcaacaggcttcctg 131025



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                
Query: 444    acccttgattcaagattcattaacacggatgaaatcgtcgagtttttcgc 493
              ||||| |||||||||||||| | |||||  ||||| || |||||||||||
Sbjct: 130781 accctggattcaagattcatcagcacggcagaaattgttgagtttttcgc 130732
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>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02,
              complete sequence
          Length = 157106

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                       
Query: 243    aaccgcttgctaacaaattcgtacggaggaactttatcaac 283
              |||| ||||| ||||||||| || |||||||||||||||||
Sbjct: 118550 aacctcttgcaaacaaattcatatggaggaactttatcaac 118590
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 243      aaccgcttgctaacaaattcgtacggaggaactttatcaac 283
                |||| ||||| ||||||||| || |||||||||||||||||
Sbjct: 27888133 aacctcttgcaaacaaattcatatggaggaactttatcaac 27888173
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>gb|AC114634.14| Mus musculus chromosome 8, clone RP24-116E2, complete sequence
          Length = 198670

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 568   cctttgcaacaaaatatggtgg 589
             ||||||||||||||||||||||
Sbjct: 96946 cctttgcaacaaaatatggtgg 96967
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>emb|BX323449.13| Zebrafish DNA sequence from clone DKEYP-115E12 in linkage group 14,
              complete sequence
          Length = 179115

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 2      tgcatacaagtttttaaaaaac 23
              ||||||||||||||||||||||
Sbjct: 136170 tgcatacaagtttttaaaaaac 136191
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>emb|BX088572.25| Zebrafish DNA sequence from clone CH211-246K16 in linkage group 14,
            complete sequence
          Length = 163812

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 2    tgcatacaagtttttaaaaaac 23
            ||||||||||||||||||||||
Sbjct: 3695 tgcatacaagtttttaaaaaac 3674
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>dbj|AB049578.1| Morus alba a-MPP mRNA for mitochondrial processing peptidase alpha
            subunit, complete cds
          Length = 1733

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 402  ccataagtcaaaagctgtcgccctatatcttctgcaacaatcacccttgattcaagattc 461
            |||||||||| ||  |||| |||||||||||||| | ||||||| || ||||| | ||||
Sbjct: 1378 ccataagtcagaacttgtctccctatatcttctgaagcaatcactctagattccaaattc 1319

              
Query: 462  at 463
            ||
Sbjct: 1318 at 1317
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>emb|CR854945.5| Zebrafish DNA sequence from clone DKEY-155H10 in linkage group 13,
             complete sequence
          Length = 231490

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     tgcatacaagtttttaaaaaa 22
             |||||||||||||||||||||
Sbjct: 86951 tgcatacaagtttttaaaaaa 86971
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>emb|CR380839.1|PTB083D21 Pan troglodytes chromosome X BAC PTB-083D21, complete sequence
          Length = 186291

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 355    tcagttcatccatacactgaa 375
              |||||||||||||||||||||
Sbjct: 126470 tcagttcatccatacactgaa 126490
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>gb|AC023721.3| Drosophila melanogaster X BAC RP98-5L4 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 166902

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 544   attcctgcaccgcgacatcaa 564
             |||||||||||||||||||||
Sbjct: 44860 attcctgcaccgcgacatcaa 44880
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>gb|AC002387.3| Arabidopsis thaliana chromosome 2 clone F4L23 map CIC02E07, complete
             sequence
          Length = 122928

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 472   atgaaatcgtcgagtttttcg 492
             |||||||||||||||||||||
Sbjct: 28742 atgaaatcgtcgagtttttcg 28722
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>ref|NM_132566.1| Drosophila melanogaster CG2577-RA (CG2577), mRNA
          Length = 1241

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 544 attcctgcaccgcgacatcaa 564
           |||||||||||||||||||||
Sbjct: 427 attcctgcaccgcgacatcaa 447
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>gb|AY089448.1| Drosophila melanogaster AT26486 full insert cDNA
          Length = 1249

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 544 attcctgcaccgcgacatcaa 564
           |||||||||||||||||||||
Sbjct: 427 attcctgcaccgcgacatcaa 447
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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 243   aaccgcttgctaacaaattcgtacggaggaactttatcaac 283
             |||| ||||| ||||||||| ||  ||||||||||||||||
Sbjct: 60792 aacctcttgcaaacaaattcatatagaggaactttatcaac 60832
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>gb|AE003489.2| Drosophila melanogaster chromosome X, section 41 of 74 of the complete
             sequence
          Length = 291799

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 544   attcctgcaccgcgacatcaa 564
             |||||||||||||||||||||
Sbjct: 41421 attcctgcaccgcgacatcaa 41441
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>emb|BX855587.13| Zebrafish DNA sequence from clone DKEY-103L5 in linkage group 7,
             complete sequence
          Length = 131836

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 566   agcctttgcaacaaaatatgg 586
             |||||||||||||||||||||
Sbjct: 15877 agcctttgcaacaaaatatgg 15857
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>gb|AC122501.3| Mus musculus BAC clone RP24-410D23 from chromosome 18, complete
             sequence
          Length = 153867

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 366   atacactgaagaaaatgatc 385
             ||||||||||||||||||||
Sbjct: 35253 atacactgaagaaaatgatc 35234
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>gb|AC146502.2| Danio rerio clone CH211-262M17, complete sequence
          Length = 134798

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 636   ctgaatgctgaaaatgcttg 655
             ||||||||||||||||||||
Sbjct: 24176 ctgaatgctgaaaatgcttg 24195
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>gb|BC020894.1| Homo sapiens cDNA clone MGC:24147 IMAGE:4702473, complete cds
          Length = 1158

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 51  ttcagcatctgctgtttgaa 70
           ||||||||||||||||||||
Sbjct: 596 ttcagcatctgctgtttgaa 615
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>emb|AL031663.2|HS461P17 Human DNA sequence from clone RP3-461P17 on chromosome 20q12-13.2
             Contains two novel genes, the WFDC2 gene for WAP
             four-disulfide core domain 2, the RPL5P2 gene for
             ribosomal protein L5 pseudogene 2, a COX6C (Cytochrome C
             Oxidase subunit VIC) pseudogene, a pseudogene similar to
             part of heat shock 60kDa protein 1 (chaperonin) (HSPD1),
             the SPINT3 gene for Kunitz type serine protease inhibitor
             3 (HKIB9), the SPINLW1 gene for serine protease
             inhibitor-like with Kunitz and WAP domains 1 (eppin), the
             WFDC6 gene for WAP four-disulfide core domain 6, the 3'
             end for WFDC8 gene for WAP four-disulfide core domain 8
             and a CpG island, complete sequence
          Length = 127027

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    tttcttcagcatctgctgtt 66
             ||||||||||||||||||||
Sbjct: 88264 tttcttcagcatctgctgtt 88283
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>emb|AL162422.10| Human DNA sequence from clone RP11-446F13 on chromosome 9, complete
             sequence
          Length = 65311

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 616   cagtattatcatatagatta 635
             ||||||||||||||||||||
Sbjct: 28220 cagtattatcatatagatta 28201
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>emb|AL603889.5| Mouse DNA sequence from clone RP23-407M20 on chromosome 11, complete
             sequence
          Length = 145052

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   ccatgcccaaatgcaaggag 162
             ||||||||||||||||||||
Sbjct: 25718 ccatgcccaaatgcaaggag 25737
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>emb|AL079350.1|ATT30C3 Arabidopsis thaliana DNA chromosome 4, BAC clone T30C3 (ESSA project)
          Length = 77793

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     tgcatacaagtttttaaaaa 21
             ||||||||||||||||||||
Sbjct: 73600 tgcatacaagtttttaaaaa 73581
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>emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 63
          Length = 198777

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      tgcatacaagtttttaaaaa 21
              ||||||||||||||||||||
Sbjct: 106482 tgcatacaagtttttaaaaa 106463
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>emb|AL121806.2|DMBR42I17 Drosophila melanogaster BAC clone BACR42I17
          Length = 155168

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 460    tcattaacacggatgaaatc 479
              ||||||||||||||||||||
Sbjct: 121179 tcattaacacggatgaaatc 121198
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>emb|AL022197.2|ATM7J2 Arabidopsis thaliana DNA chromosome 4, P1 clone M7J2 (ESSA project)
          Length = 80386

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     tgcatacaagtttttaaaaa 21
             ||||||||||||||||||||
Sbjct: 48336 tgcatacaagtttttaaaaa 48355
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>emb|CR385022.10| Zebrafish DNA sequence from clone CH211-63C12 in linkage group 23,
              complete sequence
          Length = 163551

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     ctcactgattcatcacatga 111
              ||||||||||||||||||||
Sbjct: 118151 ctcactgattcatcacatga 118170
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>gb|BC092830.1| Danio rerio zgc:110258, mRNA (cDNA clone MGC:110258 IMAGE:7398614),
            complete cds
          Length = 1677

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 636  ctgaatgctgaaaatgcttg 655
            ||||||||||||||||||||
Sbjct: 1196 ctgaatgctgaaaatgcttg 1177
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>gb|AC064801.10| Homo sapiens chromosome 18, clone RP11-120K19, complete sequence
          Length = 167843

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    agtttttaaaaaacgtattc 29
             ||||||||||||||||||||
Sbjct: 28567 agtttttaaaaaacgtattc 28586
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>ref|NM_020193.3| Homo sapiens chromosome 11 open reading frame 30 (C11orf30), mRNA
          Length = 5518

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 4    catacaagtttttaaaaaac 23
            ||||||||||||||||||||
Sbjct: 4541 catacaagtttttaaaaaac 4522
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>emb|CR609463.1| full-length cDNA clone CS0DK006YE07 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1570

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 4   catacaagtttttaaaaaac 23
           ||||||||||||||||||||
Sbjct: 179 catacaagtttttaaaaaac 160
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>gb|AC104410.3| Drosophila melanogaster X BAC RP98-10H22 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 179869

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 460    tcattaacacggatgaaatc 479
              ||||||||||||||||||||
Sbjct: 136018 tcattaacacggatgaaatc 136037
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>ref|XM_938134.1| PREDICTED: Homo sapiens hypothetical protein LOC649051 (LOC649051),
           mRNA
          Length = 1120

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 51  ttcagcatctgctgtttgaa 70
           ||||||||||||||||||||
Sbjct: 590 ttcagcatctgctgtttgaa 609
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>ref|XM_927542.1| PREDICTED: Homo sapiens hypothetical protein LOC644396 (LOC644396),
           mRNA
          Length = 1121

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 51  ttcagcatctgctgtttgaa 70
           ||||||||||||||||||||
Sbjct: 591 ttcagcatctgctgtttgaa 610
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>gb|AC092371.3| Homo sapiens chromosome 16 clone RP11-525J10, complete sequence
          Length = 171100

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 372    tgaagaaaatgatcgatagg 391
              ||||||||||||||||||||
Sbjct: 122900 tgaagaaaatgatcgatagg 122881
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>gb|AC134527.5| Mus musculus BAC clone RP24-502D8 from chromosome 8, complete sequence
          Length = 150065

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 46    atttcttcagcatctgctgtttga 69
             |||||||||||||||| |||||||
Sbjct: 92055 atttcttcagcatctggtgtttga 92032
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>ref|NM_001019908.1| Schizosaccharomyces pombe 972h- hypothetical protein
           (SPAC25B8.19c), partial mRNA
          Length = 1569

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 566 agcctttgcaacaaaatatg 585
           ||||||||||||||||||||
Sbjct: 681 agcctttgcaacaaaatatg 662
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>ref|NM_001017618.1| Danio rerio zgc:110258 (zgc:110258), mRNA
          Length = 1677

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 636  ctgaatgctgaaaatgcttg 655
            ||||||||||||||||||||
Sbjct: 1196 ctgaatgctgaaaatgcttg 1177
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>gb|AC092136.3| Homo sapiens chromosome 16 clone RP11-299F9, complete sequence
          Length = 173548

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 372    tgaagaaaatgatcgatagg 391
              ||||||||||||||||||||
Sbjct: 108928 tgaagaaaatgatcgatagg 108909
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>gb|AC005234.1| Homo sapiens BAC clone RP11-436H22 from 2, complete sequence
          Length = 190753

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    ccaaatgcaaggagaactgg 168
              ||||||||||||||||||||
Sbjct: 165919 ccaaatgcaaggagaactgg 165938
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>gb|AF226047.1|AF226047 Homo sapiens GL002 (GL002) mRNA, complete cds
          Length = 2064

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 4    catacaagtttttaaaaaac 23
            ||||||||||||||||||||
Sbjct: 1087 catacaagtttttaaaaaac 1068
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>emb|BX647398.1|HSM807543 Homo sapiens mRNA; cDNA DKFZp686M14144 (from clone DKFZp686M14144)
          Length = 4975

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 4    catacaagtttttaaaaaac 23
            ||||||||||||||||||||
Sbjct: 2636 catacaagtttttaaaaaac 2617
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>gb|AC123634.10| Mus musculus chromosome 3, clone RP24-434E24, complete sequence
          Length = 176948

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    caaacctaacctcactgatt 101
             ||||||||||||||||||||
Sbjct: 93261 caaacctaacctcactgatt 93242
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>emb|CR376851.5| Zebrafish DNA sequence from clone DKEY-48N5 in linkage group 22,
            complete sequence
          Length = 51574

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 617  agtattatcatatagattac 636
            ||||||||||||||||||||
Sbjct: 7719 agtattatcatatagattac 7700
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>gb|AE003420.2| Drosophila melanogaster chromosome X, section 4 of 74 of the complete
             sequence
          Length = 308311

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 460   tcattaacacggatgaaatc 479
             ||||||||||||||||||||
Sbjct: 77261 tcattaacacggatgaaatc 77280
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>dbj|AP002884.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-356J5, complete
              sequence
          Length = 165678

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     ttcagcatctgctgtttgaa 70
              ||||||||||||||||||||
Sbjct: 112087 ttcagcatctgctgtttgaa 112106
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>dbj|AP003165.2| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-21E7, complete
             sequence
          Length = 112843

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     catacaagtttttaaaaaac 23
             ||||||||||||||||||||
Sbjct: 99856 catacaagtttttaaaaaac 99837
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>dbj|AP000779.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-822I2, complete
              sequence
          Length = 196606

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 366    atacactgaagaaaatgatc 385
              ||||||||||||||||||||
Sbjct: 113144 atacactgaagaaaatgatc 113125
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>emb|AL441621.1|SPAC683 S.pombe chromosome I cosmid c683
          Length = 6399

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 566  agcctttgcaacaaaatatg 585
            ||||||||||||||||||||
Sbjct: 1021 agcctttgcaacaaaatatg 1040
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>dbj|AB042297.1| Homo sapiens PTS gene for 6-pyruvoyltetrahydropterin synthase, complete
             cds
          Length = 85084

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    ttcagcatctgctgtttgaa 70
             ||||||||||||||||||||
Sbjct: 52091 ttcagcatctgctgtttgaa 52110
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>emb|AL035331.1|DMC33C11 Drosophila melanogaster cosmid clone 33C11
          Length = 37005

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 460   tcattaacacggatgaaatc 479
             ||||||||||||||||||||
Sbjct: 30450 tcattaacacggatgaaatc 30431


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,775,905
Number of Sequences: 3902068
Number of extensions: 6775905
Number of successful extensions: 119544
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119360
Number of HSP's gapped (non-prelim): 178
length of query: 682
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 659
effective length of database: 17,143,297,704
effective search space: 11297433186936
effective search space used: 11297433186936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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