Clone Name	rbags6j11
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	RL3_ORYSA (P35684) 60S ribosomal protein L3	324	e-104
2	RL3B_ARATH (P22738) 60S ribosomal protein L3	311	5e-96
3	RL3A_ARATH (P17094) 60S ribosomal protein L3	310	6e-96
4	RL3_TOXCA (P49149) 60S ribosomal protein L3	235	9e-71
5	RL3_DROME (O16797) 60S ribosomal protein L3	227	2e-69
6	RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)	226	2e-69
7	RL3_RAT (P21531) 60S ribosomal protein L3 (L4)	224	6e-69
8	RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-bindi...	224	8e-69
9	RL3_BOVIN (P39872) 60S ribosomal protein L3	223	8e-69
10	RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)	226	2e-68
11	RL3_ASHGO (Q759R7) 60S ribosomal protein L3	229	5e-68
12	RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3	218	3e-67
13	RL3_KLULA (Q6CJR7) 60S ribosomal protein L3	223	2e-66
14	RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3	223	2e-65
15	RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Mainten...	220	2e-65
16	RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like	215	3e-65
17	RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3	220	6e-65
18	RL3B_SCHPO (P36584) 60S ribosomal protein L3-B	216	6e-65
19	RL3A_SCHPO (P40372) 60S ribosomal protein L3-A	216	6e-65
20	RL3_NEUCR (P59671) 60S ribosomal protein L3	218	1e-64
21	RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like	212	4e-64
22	RL3_DICDI (P34113) 60S ribosomal protein L3	221	2e-57
23	RL3_CAEEL (P50880) 60S ribosomal protein L3	221	2e-57
24	RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3	219	6e-57
25	RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3	200	4e-51
26	RL3_PIG (Q29293) 60S ribosomal protein L3 (Fragment)	169	6e-42
27	RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P	150	5e-36
28	RL3_PYRHO (O59418) 50S ribosomal protein L3P	147	2e-35
29	RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P	147	3e-35
30	RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P	137	4e-32
31	RL3_METKA (Q8TY90) 50S ribosomal protein L3P	135	2e-31
32	RL3_ARCFU (O28354) 50S ribosomal protein L3P	133	6e-31
33	RL3_METJA (P54014) 50S ribosomal protein L3P	131	2e-30
34	RL3_METVA (Q9UWG2) 50S ribosomal protein L3P	128	2e-29
35	RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P	123	5e-28
36	RL3_METTH (O26110) 50S ribosomal protein L3P	122	8e-28
37	RL3_METAC (Q8TRU7) 50S ribosomal protein L3P	119	1e-26
38	RL3_SULTO (Q975I1) 50S ribosomal protein L3P	116	6e-26
39	RL3_SULAC (Q4JB40) 50S ribosomal protein L3P	116	7e-26
40	RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P	116	7e-26
41	RL3_METMA (Q8PV50) 50S ribosomal protein L3P	115	2e-25
42	RL3_NANEQ (P60458) 50S ribosomal protein L3P	113	6e-25
43	RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)	112	8e-25
44	RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P	109	7e-24
45	RL3_THEVO (Q97BX7) 50S ribosomal protein L3P	107	3e-23
46	RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P	105	1e-22
47	RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P	101	2e-21
48	RL3_CLOTE (Q890N9) 50S ribosomal protein L3	52	1e-06
49	RL3_ENTFA (Q839G4) 50S ribosomal protein L3	50	5e-06
50	RL3_CLOAB (Q97EH8) 50S ribosomal protein L3	50	7e-06
51	RL3_BACST (P28600) 50S ribosomal protein L3	49	1e-05
52	RL3_PORGI (Q7MTL3) 50S ribosomal protein L3	49	1e-05
53	RK3_CHLS6 (Q7XYP4) 50S ribosomal protein L3, chloroplast precursor	47	4e-05
54	RL3_BACTN (Q8A476) 50S ribosomal protein L3	47	7e-05
55	RL3_BACCR (Q81J42) 50S ribosomal protein L3	46	1e-04
56	RL3_BACAN (Q81VT0) 50S ribosomal protein L3	46	1e-04
57	RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3	45	2e-04
58	RL3_LISMO (Q8Y440) 50S ribosomal protein L3	45	3e-04
59	RL3_LISMF (Q71WE6) 50S ribosomal protein L3	45	3e-04
60	RL3_LISIN (Q927K7) 50S ribosomal protein L3	45	3e-04
61	RL3_AQUPY (Q9ZI50) 50S ribosomal protein L3	45	3e-04
62	RL3_BIFLO (Q8G417) 50S ribosomal protein L3	45	3e-04
63	RL3_CHLTE (Q8KAH2) 50S ribosomal protein L3	44	5e-04
64	RL3_BACSU (P42920) 50S ribosomal protein L3 (BL3)	44	5e-04
65	RL3_TROWT (Q83FY6) 50S ribosomal protein L3	44	6e-04
66	RL3_TROW8 (Q83I78) 50S ribosomal protein L3	44	6e-04
67	RL3_THETN (Q8R7V4) 50S ribosomal protein L3	44	6e-04
68	RL3_STRP1 (Q9A1X4) 50S ribosomal protein L3	44	6e-04
69	RL3_OCEIH (Q8ETY2) 50S ribosomal protein L3	44	6e-04
70	RL3_STRP6 (Q5XED5) 50S ribosomal protein L3	43	8e-04
71	RL3_THEMA (P38515) 50S ribosomal protein L3	43	8e-04
72	RL3_STRP8 (P60452) 50S ribosomal protein L3	42	0.001
73	RL3_STRP3 (P60451) 50S ribosomal protein L3	42	0.001
74	RL3_STRA5 (Q8E2D1) 50S ribosomal protein L3	42	0.001
75	RL3_STRA3 (Q8E7T8) 50S ribosomal protein L3	42	0.001
76	RM03_BOVIN (Q3ZBX6) Mitochondrial 39S ribosomal protein L3 (L3mt...	42	0.001
77	RL3_SPIKU (P60457) 50S ribosomal protein L3	42	0.002
78	RL3_AQUAE (O66431) 50S ribosomal protein L3	42	0.002
79	RM03_HUMAN (P09001) Mitochondrial 39S ribosomal protein L3 (L3mt...	42	0.002
80	RM03_RAT (P18665) Mitochondrial 39S ribosomal protein L3 (L3mt) ...	42	0.002
81	RL3_STRMU (Q8DS16) 50S ribosomal protein L3	42	0.002
82	RM03_MOUSE (Q99N95) Mitochondrial 39S ribosomal protein L3 (L3mt...	42	0.002
83	RL3_BACHD (Q9Z9L4) 50S ribosomal protein L3	41	0.003
84	RL3_CORDI (P60453) 50S ribosomal protein L3	41	0.003
85	RL3_LEPIN (Q9XD36) 50S ribosomal protein L3	40	0.005
86	RL3_LEPIC (Q72NG1) 50S ribosomal protein L3	40	0.005
87	RK3_GUITH (O46894) Chloroplast 50S ribosomal protein L3	40	0.007
88	RL3_GEOSL (P60454) 50S ribosomal protein L3	40	0.009
89	RL3_THETH (P52860) 50S ribosomal protein L3	40	0.009
90	RL3_THET8 (Q5SHN8) 50S ribosomal protein L3	40	0.009
91	RK3B_ARATH (Q9LRN8) 50S ribosomal protein L3-2, chloroplast prec...	39	0.012
92	RL3_STRR6 (Q8CWV8) 50S ribosomal protein L3	39	0.012
93	RL3_STRPN (Q97SV5) 50S ribosomal protein L3	39	0.012
94	RL3_CORGL (Q8NT09) 50S ribosomal protein L3	39	0.012
95	RL3_DEIRA (Q9RXK2) 50S ribosomal protein L3	39	0.015
96	RL3_NEIMB (P60444) 50S ribosomal protein L3	39	0.015
97	RL3_NEIMA (P60443) 50S ribosomal protein L3	39	0.015
98	RL3_MYCPU (Q98PY0) 50S ribosomal protein L3	39	0.020
99	RL3_STAAW (P60450) 50S ribosomal protein L3	38	0.026
100	RL3_STAAS (Q6G771) 50S ribosomal protein L3	38	0.026
101	RL3_STAAR (Q6GEI3) 50S ribosomal protein L3	38	0.026
102	RL3_STAAN (P60449) 50S ribosomal protein L3	38	0.026
103	RL3_STAAM (P60448) 50S ribosomal protein L3	38	0.026
104	RL3_STAAC (Q5HDV8) 50S ribosomal protein L3	38	0.026
105	RL3_STAES (Q8CRG0) 50S ribosomal protein L3	38	0.034
106	RL3_STAEQ (Q5HLZ9) 50S ribosomal protein L3	38	0.034
107	RL3_COREF (Q8FS80) 50S ribosomal protein L3	38	0.034
108	RL3_VIBPA (Q87T13) 50S ribosomal protein L3	38	0.034
109	RL3_BUCBP (Q89A68) 50S ribosomal protein L3	37	0.044
110	RL3_BORPE (Q7VTD3) 50S ribosomal protein L3	37	0.044
111	RL3_BORPA (Q7W2F6) 50S ribosomal protein L3	37	0.044
112	RL3_BORBR (Q7WRC5) 50S ribosomal protein L3	37	0.044
113	RL3_STAHJ (Q4L8B4) 50S ribosomal protein L3	37	0.058
114	RM03_CAEEL (P49404) Putative mitochondrial 39S ribosomal protein L3	37	0.058
115	RK3_TOBAC (O80360) 50S ribosomal protein L3, chloroplast precurs...	37	0.058
116	RL3_VIBVY (Q7MPI8) 50S ribosomal protein L3	37	0.058
117	RL3_VIBVU (Q8DE39) 50S ribosomal protein L3	37	0.058
118	RL3_VIBCH (Q9KNY4) 50S ribosomal protein L3	37	0.058
119	RL3_BUCAP (Q8K950) 50S ribosomal protein L3	37	0.058
120	RL3_TREPA (O83219) 50S ribosomal protein L3	37	0.075
121	RL3_MYCGA (O52332) 50S ribosomal protein L3	37	0.075
122	RL3_PSEAE (Q9HWD5) 50S ribosomal protein L3	36	0.098
123	RL3_FUSNN (Q8RIF5) 50S ribosomal protein L3	36	0.098
124	RL3_WIGBR (Q8D212) 50S ribosomal protein L3	36	0.098
125	RL3_MYCTU (P60442) 50S ribosomal protein L3	36	0.098
126	RL3_MYCBO (P60441) 50S ribosomal protein L3	36	0.098
127	RL3_BORBU (P94267) 50S ribosomal protein L3	36	0.098
128	RL3_LACPL (Q88XY6) 50S ribosomal protein L3	36	0.13
129	RK3A_ARATH (Q9SKX4) 50S ribosomal protein L3-1, chloroplast prec...	36	0.13
130	RL3_CHLCV (Q824Q1) 50S ribosomal protein L3	35	0.17
131	RL3_XANCP (Q8PC49) 50S ribosomal protein L3	35	0.17
132	RL3_XANAC (Q8PNS4) 50S ribosomal protein L3	35	0.17
133	RL3_MYCCT (P10134) 50S ribosomal protein L3	35	0.17
134	RM09_YEAST (P31334) 60S ribosomal protein L9, mitochondrial prec...	35	0.17
135	RL3_MYCPE (Q8EUB3) 50S ribosomal protein L3	35	0.17
136	RL3_COXBU (Q83ES4) 50S ribosomal protein L3	35	0.17
137	RL3_HAEIN (P44344) 50S ribosomal protein L3	35	0.22
138	RL3_ACTAC (P94799) 50S ribosomal protein L3 (Fragment)	35	0.22
139	RL3_BRAPL (Q9FA04) 50S ribosomal protein L3	35	0.22
140	RL3_MYCLE (P30762) 50S ribosomal protein L3	35	0.22
141	RL3_BUCAI (P57591) 50S ribosomal protein L3	35	0.29
142	RL3_PSESM (Q889X1) 50S ribosomal protein L3	34	0.37
143	RL3_STAS1 (Q49ZG8) 50S ribosomal protein L3	34	0.37
144	RL3_CHLPN (Q9Z7Q7) 50S ribosomal protein L3	34	0.37
145	RL3_BLOFL (Q7VQE8) 50S ribosomal protein L3	34	0.37
146	RL3_LACLA (Q9CDW2) 50S ribosomal protein L3	34	0.37
147	RL3_PASMU (Q9CL32) 50S ribosomal protein L3	34	0.49
148	RL3_CHLMU (Q9PJL4) 50S ribosomal protein L3	34	0.49
149	RL3_CHRVO (Q7NQF2) 50S ribosomal protein L3	34	0.49
150	RL3_HAEDU (Q7VKD2) 50S ribosomal protein L3	34	0.49
151	RL3_WOLSU (Q7M8D4) 50S ribosomal protein L3	34	0.49
152	RL3_CHLTR (O84533) 50S ribosomal protein L3	33	0.64
153	RL3_STRAW (Q82DP5) 50S ribosomal protein L3	33	0.83
154	RL3_XYLFA (Q9PE76) 50S ribosomal protein L3	33	0.83
155	RL3_RALSO (Q8XV12) 50S ribosomal protein L3	33	0.83
156	FLGH_PSEPU (Q52081) Flagellar L-ring protein precursor (Basal bo...	33	0.83
157	RL3_MYCGE (P47397) 50S ribosomal protein L3	33	0.83
158	RL3_XYLFT (Q87E82) 50S ribosomal protein L3	33	1.1
159	RL3_CAUCR (Q9A8V3) 50S ribosomal protein L3	33	1.1
160	RL3_YERPS (P11252) 50S ribosomal protein L3	32	1.4
161	RL3_YERPE (Q8ZJA9) 50S ribosomal protein L3	32	1.4
162	RL3_PSEPK (Q88QN5) 50S ribosomal protein L3	32	1.4
163	FLGH_PSEPK (Q88ER9) Flagellar L-ring protein precursor (Basal bo...	32	1.4
164	RL3_MYCPN (P75580) 50S ribosomal protein L3	32	1.4
165	RL3_PHOLL (Q7MYF1) 50S ribosomal protein L3	32	1.9
166	RL3_STRCO (Q9L0E0) 50S ribosomal protein L3	32	1.9
167	RL3_ONYPE (P60455) 50S ribosomal protein L3	32	1.9
168	RL3_SHIFL (P60447) 50S ribosomal protein L3	32	2.4
169	RL3_SALTY (P60446) 50S ribosomal protein L3	32	2.4
170	RL3_SALTI (P60445) 50S ribosomal protein L3	32	2.4
171	RL3_ECOLI (P60438) 50S ribosomal protein L3	32	2.4
172	RL3_ECOL6 (P60439) 50S ribosomal protein L3	32	2.4
173	RL3_ECO57 (P60440) 50S ribosomal protein L3	32	2.4
174	RL3_SHEON (Q8EK68) 50S ribosomal protein L3	32	2.4
175	CY42_TRYBB (Q99396) Receptor-type adenylate cyclase GRESAG 4.2 (...	31	3.2
176	RL3_BRAJA (Q89J84) 50S ribosomal protein L3	31	4.1
177	HOY1_YARLI (Q99160) Homeobox protein HOY1	31	4.1
178	PHF12_MOUSE (Q5SPL2) PHD finger protein 12 (PHD factor 1) (Pf1)	30	5.4
179	RL3_PLARO (P72233) 50S ribosomal protein L3 (Fragment)	30	5.4
180	RL3_RHOPA (P60456) 50S ribosomal protein L3 (RRP-L3)	30	5.4
181	RL3_PROMM (Q7V542) 50S ribosomal protein L3	30	5.4
182	PHF12_HUMAN (Q96QT6) PHD finger protein 12 (PHD factor 1) (Pf1)	30	9.2
183	RL3_RHOBA (Q7UN20) 50S ribosomal protein L3	30	9.2
184	RK3_ODOSI (P49569) Chloroplast 50S ribosomal protein L3	30	9.2

---

>RL3_ORYSA (P35684) 60S ribosomal protein L3|
          Length = 388

 Score =  324 bits (830), Expect(2) = e-104
 Identities = 152/160 (95%), Positives = 155/160 (96%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           QINGGTIADKVDYGY FFEKE+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK
Sbjct: 184 QINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 243

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDR 337
           THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGK GQE+H A TEFDR
Sbjct: 244 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACTEFDR 303

Query: 336 TEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           TEKDITPMGGFPHYGVVK DYLMIKGCCVGPKKRVVTLRQ
Sbjct: 304 TEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQ 343



 Score = 75.5 bits (184), Expect(2) = e-104
 Identities = 36/38 (94%), Positives = 38/38 (100%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQR 102
           +LLKQTSRLALEEIKLKF+DTSSKFGHGRFQTTDEKQR
Sbjct: 344 SLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQR 381

---

>RL3B_ARATH (P22738) 60S ribosomal protein L3|
          Length = 389

 Score =  311 bits (797), Expect(2) = 5e-96
 Identities = 144/160 (90%), Positives = 152/160 (95%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           QINGG IA KVDY  + FEK+VP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK
Sbjct: 184 QINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 243

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDR 337
           THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVY++GKVGQETH A TE+DR
Sbjct: 244 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMTEYDR 303

Query: 336 TEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           TEKDITPMGGFPHYG+VK DYLMIKGCCVGPKKRVVTLRQ
Sbjct: 304 TEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQ 343



 Score = 60.5 bits (145), Expect(2) = 5e-96
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQR 102
           TLLKQTSRLA+EEIKLKF+D +S  GHGRFQT+ EK +
Sbjct: 344 TLLKQTSRLAMEEIKLKFIDAASNGGHGRFQTSQEKAK 381

---

>RL3A_ARATH (P17094) 60S ribosomal protein L3|
          Length = 388

 Score =  310 bits (793), Expect(2) = 6e-96
 Identities = 141/160 (88%), Positives = 153/160 (95%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           QINGGTIA KVD+ Y+FFEK++PI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK
Sbjct: 184 QINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 243

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDR 337
           THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTE+NKK+Y++GKVG E H A TE+DR
Sbjct: 244 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMTEYDR 303

Query: 336 TEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           TEKD+TPMGGFPHYG+VK DYLMIKGCCVGPKKRVVTLRQ
Sbjct: 304 TEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQ 343



 Score = 61.6 bits (148), Expect(2) = 6e-96
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQR 102
           +LL QTSRLALEEIKLKF+DT+S FGHGRFQT+ EK R
Sbjct: 344 SLLTQTSRLALEEIKLKFIDTASIFGHGRFQTSLEKMR 381

---

>RL3_TOXCA (P49149) 60S ribosomal protein L3|
          Length = 401

 Score =  235 bits (600), Expect(2) = 9e-71
 Identities = 104/163 (63%), Positives = 133/163 (81%), Gaps = 3/163 (1%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           QINGGT+A+KVD+     EK+VP+D+VF +DEMID IGVTKGKG++GV +RW   +LPRK
Sbjct: 183 QINGGTVAEKVDWAREHLEKQVPVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKLPRK 242

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGK---VGQETHDASTE 346
           TH+GLRKVACIGAWHP+RV +TVARAGQ GYHHRTE+NKK+Y++GK     +   +  T+
Sbjct: 243 THKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKKNGGTD 302

Query: 345 FDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           +D TEK + PMGGFPHYG+V  D++MI+GCCVG KKR +TLR+
Sbjct: 303 YDITEKSVNPMGGFPHYGLVNQDFVMIRGCCVGSKKRPITLRK 345



 Score = 52.0 bits (123), Expect(2) = 9e-71
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRLL 96
           +L+ QT R A E+I LK++DTSSKFGHGRFQT  EK+  +
Sbjct: 346 SLIVQTKRFAHEKINLKWIDTSSKFGHGRFQTHAEKRAFM 385

---

>RL3_DROME (O16797) 60S ribosomal protein L3|
          Length = 415

 Score =  227 bits (578), Expect(2) = 2e-69
 Identities = 106/167 (63%), Positives = 130/167 (77%), Gaps = 7/167 (4%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           Q+NGG+I DKV +     EK + +  VF +DEMID +GVTKGKG++GV +RW   +LPRK
Sbjct: 183 QLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRK 242

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD------- 358
           TH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y+IG  G  T D       
Sbjct: 243 THKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG-AGIHTKDGKVIKNN 301

Query: 357 ASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           ASTE+D T+K ITPMGGFPHYG V  D++MIKGCC+G KKR++TLR+
Sbjct: 302 ASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRK 348



 Score = 55.8 bits (133), Expect(2) = 2e-69
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEK 108
           +LLK T R ALE+IKLKF+DTSSK GHGRFQT  +K
Sbjct: 349 SLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADK 384

---

>RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)|
          Length = 402

 Score =  226 bits (575), Expect(2) = 2e-69
 Identities = 105/166 (63%), Positives = 136/166 (81%), Gaps = 6/166 (3%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           Q+NGGT+A+K+D+     E++VP++ VF +DEMID+IGVTKGKGY+GV +RW   +LPRK
Sbjct: 183 QVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRK 242

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDA 355
           THRGLRKVACIGAWHPARV++TVARAGQ GYHHRTE+NKK+YKIG     K G+   ++A
Sbjct: 243 THRGLRKVACIGAWHPARVAFTVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNA 302

Query: 354 STEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           ST++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR+
Sbjct: 303 STDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRK 348



 Score = 57.0 bits (136), Expect(2) = 2e-69
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRLL 96
           +LL QT R ALE+I LKF+DT+SKFGHGRFQT +EK+  +
Sbjct: 349 SLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFM 388

---

>RL3_RAT (P21531) 60S ribosomal protein L3 (L4)|
          Length = 402

 Score =  224 bits (571), Expect(2) = 6e-69
 Identities = 104/166 (62%), Positives = 136/166 (81%), Gaps = 6/166 (3%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           Q+NGGT+A+K+D+     E++VP++ VF +DEMID+IGVTKGKGY+GV +RW   +LPRK
Sbjct: 183 QVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRK 242

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDA 355
           THRGLRKVACIGAWHPARV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   ++A
Sbjct: 243 THRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNA 302

Query: 354 STEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           ST++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR+
Sbjct: 303 STDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRK 348



 Score = 57.0 bits (136), Expect(2) = 6e-69
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRLL 96
           +LL QT R ALE+I LKF+DT+SKFGHGRFQT +EK+  +
Sbjct: 349 SLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFM 388

---

>RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B)|
           (TARBP-B)
          Length = 402

 Score =  224 bits (570), Expect(2) = 8e-69
 Identities = 104/166 (62%), Positives = 136/166 (81%), Gaps = 6/166 (3%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           Q+NGGT+A+K+D+     E++VP++ VF +DEMID+IGVTKGKGY+GV +RW   +LPRK
Sbjct: 183 QVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRK 242

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDA 355
           THRGLRKVACIGAWHPARV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   ++A
Sbjct: 243 THRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNA 302

Query: 354 STEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           ST++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR+
Sbjct: 303 STDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRK 348



 Score = 57.0 bits (136), Expect(2) = 8e-69
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRLL 96
           +LL QT R ALE+I LKF+DT+SKFGHGRFQT +EK+  +
Sbjct: 349 SLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFM 388

---

>RL3_BOVIN (P39872) 60S ribosomal protein L3|
          Length = 402

 Score =  223 bits (569), Expect(2) = 8e-69
 Identities = 104/166 (62%), Positives = 135/166 (81%), Gaps = 6/166 (3%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           Q+NGGT+A+K+D+     E++VP+  VF +DEMID+IGVTKGKGY+GV +RW   +LPRK
Sbjct: 183 QVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRK 242

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDA 355
           THRGLRKVACIGAWHPARV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   ++A
Sbjct: 243 THRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNA 302

Query: 354 STEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           ST++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR+
Sbjct: 303 STDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRK 348



 Score = 57.4 bits (137), Expect(2) = 8e-69
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRLL 96
           +LL QT R ALE+I LKF+DT+SKFGHGRFQT +EK+  +
Sbjct: 349 SLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTVEEKKAFM 388

---

>RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)|
          Length = 392

 Score =  226 bits (575), Expect(2) = 2e-68
 Identities = 103/160 (64%), Positives = 130/160 (81%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           Q+NGG++ADKVD+  N FEK + ID++F+KDEMID+I VTKG G++GV +RWG  +LPRK
Sbjct: 183 QVNGGSVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLPRK 242

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDR 337
           TH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT  N KV++IGK G +  +AST+FD 
Sbjct: 243 THKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGK-GSDEGNASTDFDI 301

Query: 336 TEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           ++K ITPMGGF  YG VK DY+M+KG   G KKRV+TLR+
Sbjct: 302 SKKQITPMGGFVRYGEVKNDYIMVKGSVPGVKKRVMTLRK 341



 Score = 53.9 bits (128), Expect(2) = 2e-68
 Identities = 24/40 (60%), Positives = 32/40 (80%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRLL 96
           TL  QTSR A E+++LK++DTSSKFGHG FQT +EK+  +
Sbjct: 342 TLYPQTSRRATEKVELKWIDTSSKFGHGAFQTPEEKRAFM 381

---

>RL3_ASHGO (Q759R7) 60S ribosomal protein L3|
          Length = 388

 Score =  229 bits (583), Expect(2) = 5e-68
 Identities = 106/160 (66%), Positives = 131/160 (81%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           Q+NGG++++KVD+    FEK V +D+VF+++EMID+I VTKG G+EGV  RWG  +LPRK
Sbjct: 183 QLNGGSVSEKVDWAREHFEKTVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLPRK 242

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDR 337
           THRGLRKVACIGAWHPA V +TVARAGQNGYHHRT +N KVY+IGK G E  +A+TEFDR
Sbjct: 243 THRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKVYRIGKGGDE-GNAATEFDR 301

Query: 336 TEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           T+K ITPMGGF HYG V  D++M+KG   G +KRVVTLR+
Sbjct: 302 TKKTITPMGGFVHYGAVNNDFVMVKGSIPGTRKRVVTLRK 341



 Score = 49.3 bits (116), Expect(2) = 5e-68
 Identities = 23/40 (57%), Positives = 29/40 (72%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRLL 96
           +L   TSR ALEE+ LK++DT+SKFG GRFQT  EK   +
Sbjct: 342 SLYTSTSRRALEEVNLKWIDTASKFGKGRFQTPAEKHAFM 381

---

>RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3|
          Length = 402

 Score =  218 bits (556), Expect(2) = 3e-67
 Identities = 103/166 (62%), Positives = 135/166 (81%), Gaps = 6/166 (3%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           Q+NGGT+A+K+D+     E++VP++ VF +DEMID+IGVTKGKGY+GV +RW   +LPRK
Sbjct: 183 QVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRK 242

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDA 355
           THRGLRKVACIGA HPARV+++VARAGQ GYHHRTE+NKK+YKIG     K G+   ++A
Sbjct: 243 THRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNA 302

Query: 354 STEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           ST++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR+
Sbjct: 303 STDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRK 348



 Score = 57.0 bits (136), Expect(2) = 3e-67
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRLL 96
           +LL QT R ALE+I LKF+DT+SKFGHGRFQT +EK+  +
Sbjct: 349 SLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFM 388

---

>RL3_KLULA (Q6CJR7) 60S ribosomal protein L3|
          Length = 387

 Score =  223 bits (568), Expect(2) = 2e-66
 Identities = 100/160 (62%), Positives = 130/160 (81%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           Q+NGG+++DKVD+    FEK V +D+VF+++EMID++ VTKG G+EGV  RWG  +LPRK
Sbjct: 182 QLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLPRK 241

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDR 337
           THRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N KVY++GK G +  +A+TEFDR
Sbjct: 242 THRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGK-GDDEANAATEFDR 300

Query: 336 TEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           T+K ITPMGGF HYG +  D++++KG   G +KRVVTLR+
Sbjct: 301 TKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRK 340



 Score = 49.7 bits (117), Expect(2) = 2e-66
 Identities = 24/40 (60%), Positives = 29/40 (72%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRLL 96
           +L   TSR ALEE+ LK++DT+SKFG GRFQT  EK   L
Sbjct: 341 SLYTNTSRKALEEVTLKWIDTASKFGKGRFQTPAEKHAFL 380

---

>RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3|
          Length = 389

 Score =  223 bits (569), Expect(2) = 2e-65
 Identities = 101/160 (63%), Positives = 127/160 (79%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           Q+NGG+++DKVD+    FEK V +D+VF+KDEM+D+  VTKG G+EGV  RWG  +LPRK
Sbjct: 182 QVNGGSVSDKVDWAKEHFEKTVSVDSVFEKDEMVDVAAVTKGHGFEGVTHRWGTKKLPRK 241

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDR 337
           THRGLRKVACIGAWHPA V +TVARAGQNG+HHRT +N KVY++G  G E+  A TEFDR
Sbjct: 242 THRGLRKVACIGAWHPANVQWTVARAGQNGFHHRTSINHKVYRVGSAGDESSGA-TEFDR 300

Query: 336 TEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           T+K I PMGGF  YG VK D++++KG   G KKR+VT+R+
Sbjct: 301 TKKTINPMGGFVRYGNVKNDFMLLKGSIPGVKKRIVTIRK 340



 Score = 45.8 bits (107), Expect(2) = 2e-65
 Identities = 22/40 (55%), Positives = 27/40 (67%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRLL 96
           +L   TSR A E + LK++DT+SKFG GRFQT  EK   L
Sbjct: 341 SLYVDTSRRATENVNLKWIDTASKFGKGRFQTPAEKHAFL 380

---

>RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Maintenance of|
           killer protein 8) (Trichodermin resistance protein)
          Length = 386

 Score =  220 bits (560), Expect(2) = 2e-65
 Identities = 99/160 (61%), Positives = 128/160 (80%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           Q+NGG+I++KVD+    FEK V +D+VF+++EMID I VTKG G+EGV  RWG  +LPRK
Sbjct: 181 QLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRK 240

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDR 337
           THRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N K+Y++GK G +  + +T FDR
Sbjct: 241 THRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGK-GDDEANGATSFDR 299

Query: 336 TEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           T+K ITPMGGF HYG +K D++M+KGC  G +KR+VTLR+
Sbjct: 300 TKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRK 339



 Score = 49.3 bits (116), Expect(2) = 2e-65
 Identities = 23/40 (57%), Positives = 29/40 (72%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRLL 96
           +L   TSR ALEE+ LK++DT+SKFG GRFQT  EK   +
Sbjct: 340 SLYTNTSRKALEEVSLKWIDTASKFGKGRFQTPAEKHAFM 379

---

>RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like|
          Length = 406

 Score =  215 bits (547), Expect(2) = 3e-65
 Identities = 99/167 (59%), Positives = 129/167 (77%), Gaps = 7/167 (4%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           Q+NGGT+A+KV +     EK+VP+ +VF ++E+ID+I VTKG+G +GV +RW   +LPRK
Sbjct: 183 QLNGGTVAEKVAWAQARLEKQVPVHSVFSQNEIIDVIAVTKGRGIKGVTSRWHTKKLPRK 242

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD------- 358
           TH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKK+Y+IG+ G    D       
Sbjct: 243 THKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGR-GLHMEDGKVVKNN 301

Query: 357 ASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           AST +D T+K ITP+GGFPHYG V  D++M+KGC  G KKRV+TLR+
Sbjct: 302 ASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRK 348



 Score = 53.9 bits (128), Expect(2) = 3e-65
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRLL 96
           +LL   SR ALE I+LKF+DT+SKFGHGRFQT  EK+  +
Sbjct: 349 SLLVHHSRQALENIELKFIDTTSKFGHGRFQTAQEKRAFM 388

---

>RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3|
          Length = 387

 Score =  220 bits (560), Expect(2) = 6e-65
 Identities = 102/160 (63%), Positives = 128/160 (80%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           Q+NGG+I++KVD+    FEK V +D+VF+++EMID I VTKG G+EGV  RWG  +LPRK
Sbjct: 182 QLNGGSISEKVDWAREHFEKTVSVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRK 241

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDR 337
           THRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N K+Y+IGK G +  +A+T FDR
Sbjct: 242 THRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKIYRIGK-GDDEGNAATNFDR 300

Query: 336 TEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           T+K I PMGGF HYG+V  D++M+KG   G KKRVVTLR+
Sbjct: 301 TKKTINPMGGFVHYGMVNNDFVMVKGSIPGCKKRVVTLRK 340



 Score = 47.8 bits (112), Expect(2) = 6e-65
 Identities = 22/40 (55%), Positives = 29/40 (72%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRLL 96
           +L   TSR A+EE+ LK++DT+SKFG GRFQT  EK   +
Sbjct: 341 SLYTNTSRKAVEEVTLKWIDTASKFGKGRFQTPAEKHAFM 380

---

>RL3B_SCHPO (P36584) 60S ribosomal protein L3-B|
          Length = 387

 Score =  216 bits (549), Expect(2) = 6e-65
 Identities = 100/160 (62%), Positives = 125/160 (78%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           Q+NGG++ADKV++    FEK V I + F+++EMID+IGVT+GKG EG   RWG  RLPRK
Sbjct: 181 QVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPRK 240

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDR 337
           THRGLRKVACIGAWHPA V +TVARAG  GY HRT++N K+Y+IG  G +  +AST+FD 
Sbjct: 241 THRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFDA 299

Query: 336 TEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           TEK ITPMGGF  YGVV+ D++M+ G   GP KRV+TLR+
Sbjct: 300 TEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRK 339



 Score = 52.0 bits (123), Expect(2) = 6e-65
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRLL 96
           +LL  TSR ALE + LK++DT+SKFGHGRFQT  E ++ L
Sbjct: 340 SLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFL 379

---

>RL3A_SCHPO (P40372) 60S ribosomal protein L3-A|
          Length = 387

 Score =  216 bits (549), Expect(2) = 6e-65
 Identities = 100/160 (62%), Positives = 125/160 (78%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           Q+NGG++ADKV++    FEK V I + F+++EMID+IGVT+GKG EG   RWG  RLPRK
Sbjct: 181 QVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPRK 240

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDR 337
           THRGLRKVACIGAWHPA V +TVARAG  GY HRT++N K+Y+IG  G +  +AST+FD 
Sbjct: 241 THRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFDA 299

Query: 336 TEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           TEK ITPMGGF  YGVV+ D++M+ G   GP KRV+TLR+
Sbjct: 300 TEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRK 339



 Score = 52.0 bits (123), Expect(2) = 6e-65
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRLL 96
           +LL  TSR ALE + LK++DT+SKFGHGRFQT  E ++ L
Sbjct: 340 SLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFL 379

---

>RL3_NEUCR (P59671) 60S ribosomal protein L3|
          Length = 392

 Score =  218 bits (556), Expect(2) = 1e-64
 Identities = 100/160 (62%), Positives = 126/160 (78%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           QINGG++ADKV++G+  FEK V ID++F+KDE+ID+I VTKG G+ GV  RWG  +LPRK
Sbjct: 183 QINGGSVADKVEFGHGLFEKPVSIDSIFEKDEVIDVIAVTKGHGFTGVTARWGTKKLPRK 242

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDR 337
           TH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y+IGK G     A+TE D 
Sbjct: 243 THKGLRKVACIGAWHPSHVQWTVARAGQAGYHHRTSVNHKIYRIGK-GDAEDSAATEVDV 301

Query: 336 TEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           T+K ITPMGGF  YG +  D++M+KG   G KKRV+TLR+
Sbjct: 302 TKKKITPMGGFVRYGEINNDFVMVKGSVPGVKKRVMTLRK 341



 Score = 48.5 bits (114), Expect(2) = 1e-64
 Identities = 21/38 (55%), Positives = 31/38 (81%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQR 102
           ++   TSR ALE+++LK++DTSS+FGHG FQT  EK++
Sbjct: 342 SMFVHTSRKALEKVELKWIDTSSEFGHGAFQTPAEKKQ 379

---

>RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like|
          Length = 406

 Score =  212 bits (540), Expect(2) = 4e-64
 Identities = 98/167 (58%), Positives = 127/167 (76%), Gaps = 7/167 (4%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           Q+NGGT+A+KV +     EK+VP+ +VF + E+ID+I VTKG+G +GV +RW   +LPRK
Sbjct: 183 QLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRK 242

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD------- 358
           TH+GLRKVACIGAWHPARV  ++ARAGQ GYHHRTE+NKK+++IG+ G    D       
Sbjct: 243 THKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGR-GPHMEDGKLVKNN 301

Query: 357 ASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           AST +D T K ITP+GGFPHYG V  D++M+KGC  G KKRV+TLR+
Sbjct: 302 ASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRK 348



 Score = 52.8 bits (125), Expect(2) = 4e-64
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = -1

Query: 215 TLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRLL 96
           +LL   SR A+E I+LKF+DT+SKFGHGRFQT  EK+  +
Sbjct: 349 SLLVHHSRQAVENIELKFIDTTSKFGHGRFQTAQEKRAFM 388

---

>RL3_DICDI (P34113) 60S ribosomal protein L3|
          Length = 397

 Score =  221 bits (563), Expect = 2e-57
 Identities = 101/164 (61%), Positives = 128/164 (78%), Gaps = 4/164 (2%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           Q+NGG+I +KV++    FEK V +  VF ++E+ID+IGVTKGKG+ GV+ RWGV +LPRK
Sbjct: 184 QVNGGSIVEKVNFAVANFEKTVNVTGVFAENELIDVIGVTKGKGFNGVIKRWGVRKLPRK 243

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKV----GQETHDAST 349
           TH+GLRKVACIGAWHP+RVS TV RAGQ GYHHR E NKK+Y+IG+     G++     T
Sbjct: 244 THKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQISTGKT 303

Query: 348 EFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           EFD TEK I PMGGF HYG+VK ++LM+KGC  GP+KR +TLR+
Sbjct: 304 EFDLTEKTINPMGGFAHYGMVKHEFLMLKGCVAGPRKRALTLRK 347



 Score = 50.1 bits (118), Expect = 7e-06
 Identities = 25/54 (46%), Positives = 34/54 (62%)
 Frame = -1

Query: 263 RDAVSGQRSVW*PSAXTLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQR 102
           +  V+G R        ++  QT R ALE+I LKF+DTSSKFGHG  QT ++K +
Sbjct: 332 KGCVAGPRKRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQTAEDKTK 385

---

>RL3_CAEEL (P50880) 60S ribosomal protein L3|
          Length = 401

 Score =  221 bits (562), Expect = 2e-57
 Identities = 99/163 (60%), Positives = 129/163 (79%), Gaps = 3/163 (1%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           Q+NGGTI  KVD+     EK+V +D VF +DEMID IGVT+G G++GV +RW   +LPRK
Sbjct: 184 QVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRK 243

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGK---VGQETHDASTE 346
           TH+GLRKVACIGAWHP+RV++TVARAGQ G+HHRT +N K+Y+IGK     +  ++ STE
Sbjct: 244 THKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTE 303

Query: 345 FDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           FD T+K ITPMGGFP YG+V  DY+M++G  +GPKKR++TLR+
Sbjct: 304 FDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRK 346



 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 28/56 (50%), Positives = 37/56 (66%)
 Frame = -1

Query: 263 RDAVSGQRSVW*PSAXTLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRLL 96
           R AV G +        +L+ QT R+A E+I LK++DTSSK GHGRFQTT EK+  +
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFM 386

---

>RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3|
          Length = 401

 Score =  219 bits (558), Expect = 6e-57
 Identities = 99/163 (60%), Positives = 128/163 (78%), Gaps = 3/163 (1%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           QINGGTI  KVD+     EK++ +D VF +DEMID IGVTKG G++GV +RW   +LPRK
Sbjct: 184 QINGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKKLPRK 243

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGK---VGQETHDASTE 346
           TH+GLRKVACIGAWHP+RV++TVARAGQ G+HHRT +N K+Y+IGK     +  ++ STE
Sbjct: 244 THKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTE 303

Query: 345 FDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           FD T+K I PMGGFP YG+V  DY+M++G  +GPKKR++TLR+
Sbjct: 304 FDLTQKTINPMGGFPRYGLVNQDYVMLRGAILGPKKRLITLRK 346



 Score = 53.1 bits (126), Expect = 8e-07
 Identities = 27/56 (48%), Positives = 37/56 (66%)
 Frame = -1

Query: 263 RDAVSGQRSVW*PSAXTLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRLL 96
           R A+ G +        +L+ QT R+A E+I LK++DTSSK GHGRFQTT EK+  +
Sbjct: 331 RGAILGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFM 386

---

>RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3|
          Length = 383

 Score =  200 bits (508), Expect = 4e-51
 Identities = 94/160 (58%), Positives = 123/160 (76%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           Q+NGG+I++KV++     EKE+ I  VF  +E ID IGVTKGKG++G V R+GV + PRK
Sbjct: 178 QVNGGSISEKVEWALGRLEKEIAIGEVFGVNENIDTIGVTKGKGFQGTVKRFGVRKQPRK 237

Query: 516 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDR 337
           + +G+RKVACIGAWHP+RV Y++ARAGQ G+H RTE NK+VY I   G  + +  TEFD 
Sbjct: 238 SRKGIRKVACIGAWHPSRVMYSIARAGQMGFHRRTEKNKRVYMI---GNGSSNIKTEFDL 294

Query: 336 TEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
           TEK I+PMGGFPHYG V+ D++M+KG  VG +KRVVTLR+
Sbjct: 295 TEKPISPMGGFPHYGEVRNDFIMVKGAVVGARKRVVTLRK 334



 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 27/53 (50%), Positives = 34/53 (64%)
 Frame = -1

Query: 263 RDAVSGQRSVW*PSAXTLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 105
           + AV G R        +LL+Q    A EE+ +KFVDTSSK GHGRFQT+ EK+
Sbjct: 319 KGAVVGARKRVVTLRKSLLRQR---AGEELVIKFVDTSSKIGHGRFQTSAEKK 368

---

>RL3_PIG (Q29293) 60S ribosomal protein L3 (Fragment)|
          Length = 130

 Score =  169 bits (429), Expect = 6e-42
 Identities = 79/129 (61%), Positives = 102/129 (79%), Gaps = 6/129 (4%)
 Frame = -3

Query: 633 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSY 454
           VP++ VF +DEMID+IGVTKGKGY+GV +RW   +LPRKTHRGLRKVACIGAWHPAR ++
Sbjct: 2   VPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARXAF 61

Query: 453 TVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYG 292
           +VARAGQ GYHHRTE+NKK+YKIG     K G+   ++  T++D ++K I P+G F HYG
Sbjct: 62  SVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNXXTDYDLSDKSINPLGRFVHYG 121

Query: 291 VVKADYLMI 265
            V  D++M+
Sbjct: 122 EVTNDFVML 130

---

>RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P|
          Length = 365

 Score =  150 bits (378), Expect = 5e-36
 Identities = 72/158 (45%), Positives = 103/158 (65%)
 Frame = -3

Query: 693 INGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 514
           I G ++ +K +Y      KE+ +  V ++ E++D+I VTKGKG +G V RWG+     K 
Sbjct: 187 IGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKD 246

Query: 513 HRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRT 334
            +G RKV  IG WHPARV +TV  AGQ G+HHRTE+NK++  IG+ G+   D +TE    
Sbjct: 247 SKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGKLKLDENTEI--- 303

Query: 333 EKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLR 220
             +ITP GGFPHYG+V++D++MI G   G  KR++ +R
Sbjct: 304 --EITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVR 339

---

>RL3_PYRHO (O59418) 50S ribosomal protein L3P|
          Length = 362

 Score =  147 bits (372), Expect = 2e-35
 Identities = 71/158 (44%), Positives = 100/158 (63%)
 Frame = -3

Query: 693 INGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 514
           I G ++ +K +Y      KE+ +  V ++ E++D+I VTKGKG +G V RWG+     K 
Sbjct: 185 IGGTSVEEKFNYIKEKLGKEIRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKD 244

Query: 513 HRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRT 334
            +G RKV  IG WHPARV +TV  AGQ G+HHRTE+NK++  IG+ G+         D  
Sbjct: 245 SKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGK------LVIDGN 298

Query: 333 EKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLR 220
           E +ITP GGFPHYG+V+ D++MI G   G  KR++ +R
Sbjct: 299 EIEITPKGGFPHYGIVRGDFMMIAGSVPGAIKRIIRVR 336

---

>RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P|
          Length = 361

 Score =  147 bits (371), Expect = 3e-35
 Identities = 71/158 (44%), Positives = 101/158 (63%)
 Frame = -3

Query: 693 INGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 514
           I G ++ +K +Y      KE+ +  V ++ E++D+I VTKGKG +G V RWG+     K 
Sbjct: 184 IGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKD 243

Query: 513 HRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRT 334
            +G RKV  IG WHPARV +TV  AGQ G+HHRTE+NK++  IG+ G+         D  
Sbjct: 244 SKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGK------LVIDGN 297

Query: 333 EKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLR 220
           E +ITP GGFPHYG+V++D++MI G   G  KR++ +R
Sbjct: 298 EIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVR 335

---

>RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P|
          Length = 346

 Score =  137 bits (344), Expect = 4e-32
 Identities = 71/160 (44%), Positives = 96/160 (60%), Gaps = 2/160 (1%)
 Frame = -3

Query: 693 INGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 514
           I G  +  K DY      KE+    V  + E++D+I VTKGKG +G V RWGV     K 
Sbjct: 167 IGGDDVKAKFDYAKEKIGKELRAGEVLHEGELLDVIAVTKGKGTQGPVKRWGVKVQFHKA 226

Query: 513 HRGL--RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 340
            R    R +  +G WHPARV +TV +AGQ G+HHRTE NK++  IG+ G+         D
Sbjct: 227 QRAGKGRHIGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGK------LVLD 280

Query: 339 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLR 220
             E +ITP GGFPHYG+V++D+LMI+G   G  KR++ +R
Sbjct: 281 GNEIEITPKGGFPHYGIVRSDFLMIEGTIPGSFKRIIRVR 320

---

>RL3_METKA (Q8TY90) 50S ribosomal protein L3P|
          Length = 361

 Score =  135 bits (339), Expect = 2e-31
 Identities = 69/161 (42%), Positives = 97/161 (60%), Gaps = 2/161 (1%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 517
           +I G  + ++ +Y      +E+    VF + E++D+  +TKGKG++GVV RWGVT   RK
Sbjct: 169 RIGGKDVRERFEYAVEILSEEIRAKDVFDEGEIVDVSAITKGKGFQGVVKRWGVTIQDRK 228

Query: 516 THRGL--RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 343
           T R    R +  IG   P+RV +TV  AGQ GYH RTE NK++ KIG+ G+E        
Sbjct: 229 TQRKQKGRHIGSIGPITPSRVRWTVPMAGQVGYHQRTEHNKRILKIGEDGEE-------- 280

Query: 342 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLR 220
                 +TP GGF +YGVV+ DY+MI G   GPKKR++ +R
Sbjct: 281 ------VTPRGGFVNYGVVRGDYIMIHGTVPGPKKRLIRVR 315

---

>RL3_ARCFU (O28354) 50S ribosomal protein L3P|
          Length = 331

 Score =  133 bits (334), Expect = 6e-31
 Identities = 66/158 (41%), Positives = 95/158 (60%), Gaps = 2/158 (1%)
 Frame = -3

Query: 687 GGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 508
           GG + + +DY  +   KE+ +  VF +  +ID+I VTKGKG++G V RWGV  L  K  R
Sbjct: 162 GGNVEEALDYAISKLGKEISVSEVFDEGAIIDVIAVTKGKGFQGPVKRWGVITLDAKHAR 221

Query: 507 GL--RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRT 334
               R+V  +G W+P  V +TV +AGQ G+H RTE NK++ KIG+ G+E           
Sbjct: 222 SSKHRRVGNLGPWNPHHVRWTVPQAGQMGFHQRTEYNKRLIKIGENGEE----------- 270

Query: 333 EKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLR 220
              ITP GGF HYGV++  Y+++ G   GP KR++ +R
Sbjct: 271 ---ITPKGGFLHYGVIRTQYVLVTGSVPGPVKRLIRMR 305

---

>RL3_METJA (P54014) 50S ribosomal protein L3P|
          Length = 335

 Score =  131 bits (329), Expect = 2e-30
 Identities = 68/162 (41%), Positives = 97/162 (59%), Gaps = 2/162 (1%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 520
           +I G  I ++++Y      K++ I  VFQ+ E++D IGVTKGKG++G V RWGV  +  +
Sbjct: 163 RIGGKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGK 222

Query: 519 KTHRGL-RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 343
              +G+ R V  IG W P  V ++V   GQ GYH RTE NK++ KIG  G E        
Sbjct: 223 HARKGVGRHVGSIGPWQPKMVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDE-------- 274

Query: 342 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
                 ITP GGF HYGV++ +Y+++KG   GP KR++ LR+
Sbjct: 275 ------ITPKGGFLHYGVIRNNYVVLKGSVQGPAKRLIVLRR 310

---

>RL3_METVA (Q9UWG2) 50S ribosomal protein L3P|
          Length = 334

 Score =  128 bits (321), Expect = 2e-29
 Identities = 68/168 (40%), Positives = 97/168 (57%), Gaps = 2/168 (1%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 520
           ++ G ++A+K+ Y  +   K + I+ VF+  E ID + VTKGKG++G V RWGV  +  +
Sbjct: 162 RVGGSSVAEKLAYAKDILGKTLSINDVFETGEFIDTLAVTKGKGFQGPVKRWGVKIQFGK 221

Query: 519 KTHRGL-RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 343
              +G+ R+   IG W P RV +TV  AGQ G+H RTE NK++ K+G  G E        
Sbjct: 222 HQRKGVGRQTGSIGPWRPKRVMWTVPLAGQMGFHQRTEYNKRILKLGSEGAE-------- 273

Query: 342 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQXXAEAD 199
                 ITP GGF +YG VK  Y+++KG   GP KR+V LR     A+
Sbjct: 274 ------ITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGAVRPAE 315

---

>RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P|
          Length = 338

 Score =  123 bits (309), Expect = 5e-28
 Identities = 67/156 (42%), Positives = 94/156 (60%), Gaps = 2/156 (1%)
 Frame = -3

Query: 681 TIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHR 508
           ++ +++++  +   K V    VF   +++D+I VTKGKGY+GV+ R+GVT LPR  K  +
Sbjct: 173 SVDERINFAISLLGKTVSPKDVFTPGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRK 232

Query: 507 GLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEK 328
           G R+   IG   PA V +T  R GQ G+H RTE NK++ KIG+ G E             
Sbjct: 233 GHRRTGTIGPQAPA-VMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE------------- 278

Query: 327 DITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLR 220
            ITP  GFPHYGVVK  Y++I+G   G +KR+V LR
Sbjct: 279 -ITPKSGFPHYGVVKGPYILIQGSVPGARKRLVVLR 313

---

>RL3_METTH (O26110) 50S ribosomal protein L3P|
          Length = 337

 Score =  122 bits (307), Expect = 8e-28
 Identities = 67/167 (40%), Positives = 91/167 (54%), Gaps = 3/167 (1%)
 Frame = -3

Query: 693 INGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 514
           + G T  +K +Y      K+V    +F +   +D I VTKGKG++G V RWG+     K 
Sbjct: 164 LGGKTPEEKFEYALEILGKDVRASEIFSEGAFVDAIAVTKGKGFQGPVKRWGIRIQYGKA 223

Query: 513 HRGL--RKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 340
            R    R +  +G W P+R  +TV +AGQ GYH RTE NK++ KIG             D
Sbjct: 224 ARSSKGRHIGSLGPWTPSRTMWTVPQAGQMGYHRRTEYNKQILKIG-------------D 270

Query: 339 RTEKD-ITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQXXAEA 202
            +E D + P GGF  YG+V+ DY+MIKG   GP KR+V LR+    A
Sbjct: 271 ASEADLVNPDGGFVRYGLVRNDYVMIKGSVPGPTKRLVVLRKAIRAA 317

---

>RL3_METAC (Q8TRU7) 50S ribosomal protein L3P|
          Length = 337

 Score =  119 bits (297), Expect = 1e-26
 Identities = 62/160 (38%), Positives = 91/160 (56%), Gaps = 2/160 (1%)
 Frame = -3

Query: 693 INGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 514
           I+   +  K +Y        V +  VF+   ++D   +T GKG +G V RWG+  +  K 
Sbjct: 167 ISARDLGTKFEYSKTILGTLVSVTDVFKNGTLVDTAAITIGKGTQGPVKRWGIQLMKGKH 226

Query: 513 HR--GLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 340
            R   LR+V  +GA++P+RVS+ V + GQ GYH RTE NK++ KIG  G+E         
Sbjct: 227 SRQGSLRQVGTLGAFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE--------- 277

Query: 339 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLR 220
                +TP GGF +YG+V+ DY++IKG   GP KR++ LR
Sbjct: 278 -----VTPEGGFINYGLVRGDYILIKGSVPGPSKRLIRLR 312

---

>RL3_SULTO (Q975I1) 50S ribosomal protein L3P|
          Length = 343

 Score =  116 bits (291), Expect = 6e-26
 Identities = 68/161 (42%), Positives = 94/161 (58%), Gaps = 2/161 (1%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR- 520
           Q+ GG I  +++Y  N   K + +  VF++ ++IDIIGVTKGKG++GVV R+GV  LPR 
Sbjct: 174 QVGGGDIKSQLNYVLNILGKPLSVKDVFKEGQLIDIIGVTKGKGFQGVVKRYGVVELPRW 233

Query: 519 -KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 343
            K  +G RKV   G    +  SY V + GQ GYH RTE NK++ KI              
Sbjct: 234 HKHRKGSRKVGARGPSF-STPSY-VPQPGQMGYHRRTEYNKRILKISD------------ 279

Query: 342 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLR 220
                +I P GGF +YG+V+  YL+I+G  +G KKR + LR
Sbjct: 280 --DPNEINPKGGFVNYGIVRNTYLIIEGSIIGAKKRPLFLR 318

---

>RL3_SULAC (Q4JB40) 50S ribosomal protein L3P|
          Length = 342

 Score =  116 bits (290), Expect = 7e-26
 Identities = 65/161 (40%), Positives = 96/161 (59%), Gaps = 2/161 (1%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR- 520
           QI GG+I D+++YG +   K++P+  VF++ ++ DIIGVTKGKG++GV+ R+ V   PR 
Sbjct: 173 QIGGGSIQDQLNYGLSLLGKQIPVRDVFREGQLTDIIGVTKGKGFQGVIKRYSVVEFPRW 232

Query: 519 -KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 343
            K  +G RK+   G    +  SY V + GQ G+H RTE NK++ KIG             
Sbjct: 233 HKHRKGSRKIGARGP-SISTPSY-VPQPGQLGFHRRTEYNKRIIKIGD------------ 278

Query: 342 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLR 220
                +I P GG  +YG+VK  YL+I+G  +G +KR + LR
Sbjct: 279 --NVNEINPAGGIVNYGLVKNTYLVIEGSVLGSRKRPLFLR 317

---

>RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P|
          Length = 351

 Score =  116 bits (290), Expect = 7e-26
 Identities = 65/162 (40%), Positives = 93/162 (57%), Gaps = 2/162 (1%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR- 520
           QI GG    ++DY  N   KE+ I  VF++ ++ID++GVTKGKG+ GV+ R+ V  LPR 
Sbjct: 182 QIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRW 241

Query: 519 -KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEF 343
            K  +G RK+   G       SYT  + GQ G+H RTE NK++ KIG             
Sbjct: 242 HKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGD------------ 287

Query: 342 DRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
               K+I P GGF  YG+V+  Y++++G  +G KKR + LR+
Sbjct: 288 --EPKEINPAGGFVRYGIVRNTYVLLEGSILGSKKRPIFLRE 327

---

>RL3_METMA (Q8PV50) 50S ribosomal protein L3P|
          Length = 337

 Score =  115 bits (287), Expect = 2e-25
 Identities = 60/160 (37%), Positives = 91/160 (56%), Gaps = 2/160 (1%)
 Frame = -3

Query: 693 INGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 514
           I+   +  K +Y  +     V +  VF+   ++D   +T GKG +G V RWG+     K 
Sbjct: 167 ISAKDLGAKFEYAKSILGNLVNVTDVFKNGTVVDTAAITIGKGTQGPVKRWGIQLQKGKH 226

Query: 513 HR--GLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 340
            R   LR++  +G+++P+RVS+ V + GQ GYH RTE NK++ KIG  G+E         
Sbjct: 227 SRQGSLRQIGTLGSFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE--------- 277

Query: 339 RTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLR 220
                +TP GGF +YG+V+ DY++IKG   GP KR++ LR
Sbjct: 278 -----VTPEGGFINYGLVRGDYVLIKGSVPGPSKRLIRLR 312

---

>RL3_NANEQ (P60458) 50S ribosomal protein L3P|
          Length = 321

 Score =  113 bits (282), Expect = 6e-25
 Identities = 59/159 (37%), Positives = 90/159 (56%)
 Frame = -3

Query: 693 INGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 514
           I G  +  K++Y  +   KE+ I+ VF++ + +D+I VTKGKG++GV+ R+ V R   K+
Sbjct: 157 IGGSDVNKKLEYALSLLGKELSINDVFKEGQYVDVIAVTKGKGFQGVIKRFHVHRRQHKS 216

Query: 513 HRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRT 334
            +G+RKV  IG+  P R+  TV   GQ GYH RTE NK + KIG                
Sbjct: 217 EKGVRKVGAIGSRGPGRIFPTVPMPGQMGYHRRTEYNKLIIKIG---------------- 260

Query: 333 EKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQ 217
            + +   GG+  YG V    +++KG   GP+KR++ LR+
Sbjct: 261 -EPLNVEGGWVRYGQVIGPTILLKGSVPGPRKRLIILRE 298

---

>RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)|
          Length = 337

 Score =  112 bits (281), Expect = 8e-25
 Identities = 61/163 (37%), Positives = 92/163 (56%), Gaps = 4/163 (2%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEK--EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 523
           ++ GG+++D++D+  +  E   E  ++ +F+  E  D+ GVTKGKG +G V RWGV +  
Sbjct: 165 RVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRK 224

Query: 522 RKTHRG--LRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDAST 349
            K  R    R++  +G W+P+RV  TV + GQ GYH RTE+NK++  IG+  + T D   
Sbjct: 225 GKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVD--- 281

Query: 348 EFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLR 220
                       GGF +YG V   Y ++KG   GP KR+V  R
Sbjct: 282 ------------GGFVNYGEVDGPYTLVKGSVPGPDKRLVRFR 312

---

>RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P|
          Length = 334

 Score =  109 bits (273), Expect = 7e-24
 Identities = 62/163 (38%), Positives = 89/163 (54%), Gaps = 4/163 (2%)
 Frame = -3

Query: 696 QINGGTIADKVDYGYNFFEKEV--PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 523
           ++ GGT+AD++++  +  E         VF+  E  D  G+TKGKG +G V RWGV +  
Sbjct: 162 RVGGGTLADRLEFAADLIEDGGVHAFGDVFRAGEFTDAAGITKGKGTQGPVKRWGVQKRK 221

Query: 522 RKTHRG--LRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDAST 349
            K  R    R++  +G W+P+RV  TV + GQ GYH RTE+NK++  I   G E      
Sbjct: 222 GKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIND-GDEP----- 275

Query: 348 EFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLR 220
                    TP GGFP+YG V   Y ++KG   GP++R+V  R
Sbjct: 276 ---------TPDGGFPNYGEVDGPYTLVKGSVPGPEQRLVRFR 309

---

>RL3_THEVO (Q97BX7) 50S ribosomal protein L3P|
          Length = 331

 Score =  107 bits (268), Expect = 3e-23
 Identities = 58/156 (37%), Positives = 84/156 (53%)
 Frame = -3

Query: 687 GGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 508
           G ++ ++ +Y      K +  +   +  + +D++ VTKGKG+ G V R+GV  LPRK  +
Sbjct: 162 GNSVKERFEYATAHLGKTIRFEDFSKPGKFVDVLSVTKGKGFTGHVQRFGVKLLPRKNRK 221

Query: 507 GLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEK 328
             R +  +G WHP  V  TV +AGQ GY  RT  N +V K  K      DA T       
Sbjct: 222 HRRMIGTLGPWHPDWVRNTVPQAGQMGYQQRTISNVRVLKYSK----GEDADT------- 270

Query: 327 DITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLR 220
            I   GGF HYG+VK DY+++ G   GP KR++ +R
Sbjct: 271 -INVRGGFLHYGLVKNDYVLLFGSVPGPAKRLIKMR 305

---

>RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P|
          Length = 331

 Score =  105 bits (263), Expect(2) = 1e-22
 Identities = 55/156 (35%), Positives = 83/156 (53%)
 Frame = -3

Query: 687 GGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 508
           G ++ ++++Y  N   K++      +  + +D++ +TKGKG+ G V R+GV  LPRK  +
Sbjct: 162 GNSVKERLEYAKNHLGKQITFTDFSKPGKFVDVVSITKGKGFTGHVKRFGVKLLPRKNRK 221

Query: 507 GLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEK 328
             R +  +G WHP  V  TV +AGQ G+  RT  N +V K G           E D    
Sbjct: 222 HRRMIGTLGPWHPDWVRNTVPQAGQMGFQQRTISNVRVIKYGN--------KEEVD---- 269

Query: 327 DITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLR 220
            I   GGF HYG VK DY+++ G   G  KR++ +R
Sbjct: 270 SINVRGGFLHYGFVKNDYVLLFGSIPGASKRLIKMR 305



 Score = 20.8 bits (42), Expect(2) = 1e-22
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 185 LEEIKLKFVDTSSKFG 138
           +EE+KL+++   SK G
Sbjct: 315 IEEVKLEYISLESKQG 330

---

>RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P|
          Length = 344

 Score =  101 bits (252), Expect = 2e-21
 Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 5/164 (3%)
 Frame = -3

Query: 696 QINGGTIADKV---DYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 526
           +I  G ++D     DY  +     + ++ VF++ +++D+I VTKGKG++GV+ RWGV  L
Sbjct: 167 EIKVGGVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLVDVIAVTKGKGFQGVIKRWGVKEL 226

Query: 525 PR--KTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDAS 352
           PR  K  +G R++      H     +   +AGQ G+H RTE NK++  I   G +     
Sbjct: 227 PRWHKHRKGSRRIGARS--HGRSTFWETPQAGQTGFHRRTEYNKRILMIDDDGYK----- 279

Query: 351 TEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLR 220
                    +TP GGF  YGVV++ ++M+ G   G  KR + +R
Sbjct: 280 ---------VTPAGGFLRYGVVRSTFVMLSGSIPGTPKRPIVMR 314

---

>RL3_CLOTE (Q890N9) 50S ribosomal protein L3|
          Length = 209

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWH 472
           +E+ +D +F+  E ID+ G +KGKGY+G++ RW   R P     K HR +  +    A +
Sbjct: 95  QEIKVD-IFEAGEKIDVTGTSKGKGYQGIIKRWNAHRGPMSHGSKFHRAVGSMG--AASY 151

Query: 471 PARVSYTVARAGQNGYHHRTEMNKKVYK 388
           PAR       AG  G    T +N +V K
Sbjct: 152 PARTFKNKRMAGHMGNVKSTVLNLEVVK 179

---

>RL3_ENTFA (Q839G4) 50S ribosomal protein L3|
          Length = 209

 Score = 50.4 bits (119), Expect = 5e-06
 Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 1/150 (0%)
 Frame = -3

Query: 666 VDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVA 490
           V+ G     KE+ +D VFQ  +++D+ G TKGKG++G + R G +R P     R  R+  
Sbjct: 86  VELGEYEVGKEIKVD-VFQAGDVVDVTGTTKGKGFQGAIKRHGQSRGPMSHGSRYHRRPG 144

Query: 489 CIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMG 310
            +G   P RV      AG+ G    T  N +V K+                         
Sbjct: 145 SMGPVAPNRVFKNKRLAGRMGGDRVTIQNLEVVKVD------------------------ 180

Query: 309 GFPHYGVVKADYLMIKGCCVGPKKRVVTLR 220
                  V+ + ++IKG   G KK ++T++
Sbjct: 181 -------VERNVILIKGNIPGAKKSLITIK 203

---

>RL3_CLOAB (Q97EH8) 50S ribosomal protein L3|
          Length = 209

 Score = 50.1 bits (118), Expect = 7e-06
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYT 451
           +F   E +D+ GV+KGKG++G + RWG  R P     K HR +  +   G+  P+R   +
Sbjct: 101 IFAAGEKVDVSGVSKGKGFQGTIRRWGAHRGPMSHGSKFHRAVGSMG--GSSDPSRTFKS 158

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
               G  G+ + T +N +V K+
Sbjct: 159 KKMPGHMGHVNTTVLNVEVAKV 180

---

>RL3_BACST (P28600) 50S ribosomal protein L3|
          Length = 213

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPAR 463
           +EV +D +F + +++D+ G++KGKG++G + R G +R P     R  R+   +GA  P R
Sbjct: 95  QEVKVD-IFSEGDIVDVTGISKGKGFQGAIKRHGQSRGPMAHGSRYHRRPGSMGAIAPNR 153

Query: 462 VSYTVARAGQNGYHHRTEMNKKVYKI 385
           V  T    G+ G    T  N K+ K+
Sbjct: 154 VFKTKNLPGRMGGERVTIQNLKIVKV 179

---

>RL3_PORGI (Q7MTL3) 50S ribosomal protein L3|
          Length = 205

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
 Frame = -3

Query: 615 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSYTV 448
           F   + +D++G +KGKG++GVV R G   + + T   H  LR    +GA  +PA+V    
Sbjct: 100 FSDADFVDVVGTSKGKGFQGVVKRHGFGGVGQATHGQHNRLRAPGAVGACSYPAKVFKGT 159

Query: 447 ARAGQNGYHHRTEMNKKVYKI 385
             AGQ G    T  N +V K+
Sbjct: 160 RMAGQMGNERVTVQNLEVIKV 180

---

>RK3_CHLS6 (Q7XYP4) 50S ribosomal protein L3, chloroplast precursor|
          Length = 302

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWH 472
           +++  + +F+  +++D+ G + GKG++G + RWG+ R P     K+HR    + C     
Sbjct: 183 QQLKAEELFEVGDLVDVSGTSSGKGFQGSIRRWGMKRGPMSHGSKSHRQHGSIGCSAT-- 240

Query: 471 PARVSYTVARAGQNGYHHRT 412
           P+RV   +  AG+ G   +T
Sbjct: 241 PSRVYKGLKMAGRMGNERKT 260

---

>RL3_BACTN (Q8A476) 50S ribosomal protein L3|
          Length = 205

 Score = 46.6 bits (109), Expect = 7e-05
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSYT 451
           +F     +D++G +KGKG++GVV R G   + + T   H   RK   IGA  +PA+V   
Sbjct: 99  MFNDATFVDVVGTSKGKGFQGVVKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKG 158

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
           +   GQ G    T  N +V K+
Sbjct: 159 MRMGGQLGGDRVTVQNLQVLKV 180

---

>RL3_BACCR (Q81J42) 50S ribosomal protein L3|
          Length = 210

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 463
           +EV +D VF   E++D+ G++KGKG++GV+ R G +R P     R  R+   +G   P R
Sbjct: 95  QEVKVD-VFATGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNR 153

Query: 462 VSYTVARAGQNGYHHRTEMNKKVYKI 385
           V      AG+ G    T  N ++ ++
Sbjct: 154 VFKGKKLAGRMGGDQVTIQNLEIVQV 179

---

>RL3_BACAN (Q81VT0) 50S ribosomal protein L3|
          Length = 210

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 463
           +EV +D VF   E++D+ G++KGKG++GV+ R G +R P     R  R+   +G   P R
Sbjct: 95  QEVKVD-VFATGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNR 153

Query: 462 VSYTVARAGQNGYHHRTEMNKKVYKI 385
           V      AG+ G    T  N ++ ++
Sbjct: 154 VFKGKKLAGRMGGDQVTIQNLEIVQV 179

---

>RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3|
          Length = 209

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
 Frame = -3

Query: 636 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHP 469
           E+ +D  F+  + +D+ GV+KGKG++G + RW  +R P     K HR    +    A  P
Sbjct: 96  EIKVDT-FEIGDKVDVSGVSKGKGFQGTIKRWNASRGPMSHGSKFHRAPGSMG--AASDP 152

Query: 468 ARVSYTVARAGQNGYHHRTEMNKKVYKI 385
           +R        G  G  + T +N +V KI
Sbjct: 153 SRTFKNKRMPGHMGAKNTTVLNLEVVKI 180

---

>RL3_LISMO (Q8Y440) 50S ribosomal protein L3|
          Length = 209

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = -3

Query: 636 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 460
           EV +D VF + ++ID  GV+KGKG++GV+ R G +R P     R  R+   +G   P RV
Sbjct: 96  EVKVD-VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 154

Query: 459 SYTVARAGQNGYHHRTEMNKKVYKI 385
                  G+ G    T  N ++ K+
Sbjct: 155 FKNKLLPGRMGGEQITIQNLEIVKV 179

---

>RL3_LISMF (Q71WE6) 50S ribosomal protein L3|
          Length = 209

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = -3

Query: 636 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 460
           EV +D VF + ++ID  GV+KGKG++GV+ R G +R P     R  R+   +G   P RV
Sbjct: 96  EVKVD-VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 154

Query: 459 SYTVARAGQNGYHHRTEMNKKVYKI 385
                  G+ G    T  N ++ K+
Sbjct: 155 FKNKLLPGRMGGEQITIQNLEIVKV 179

---

>RL3_LISIN (Q927K7) 50S ribosomal protein L3|
          Length = 209

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = -3

Query: 636 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 460
           EV +D VF + ++ID  GV+KGKG++GV+ R G +R P     R  R+   +G   P RV
Sbjct: 96  EVKVD-VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 154

Query: 459 SYTVARAGQNGYHHRTEMNKKVYKI 385
                  G+ G    T  N ++ K+
Sbjct: 155 FKNKLLPGRMGGEQITIQNLEIVKV 179

---

>RL3_AQUPY (Q9ZI50) 50S ribosomal protein L3|
          Length = 244

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIG 481
           +E+ +  VF+  +++D+ G++KG+G+ GV+ RW     PR   HR  R V  IG
Sbjct: 96  QELRVQDVFKPGDLVDVWGISKGRGFAGVMKRWDFAGFPRSHGHRYHRAVGAIG 149

---

>RL3_BIFLO (Q8G417) 50S ribosomal protein L3|
          Length = 213

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HPARVSYTV 448
           +F++   +D+ G TKGKG+ G + RWG    R    +H+  R+   +GA   P+R+    
Sbjct: 103 LFEEGAEVDVTGTTKGKGFAGTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGK 162

Query: 447 ARAGQNGYHHRTEMNKKV 394
             AG+ G+   T  N  V
Sbjct: 163 RMAGRMGHVTATTQNLTV 180

---

>RL3_CHLTE (Q8KAH2) 50S ribosomal protein L3|
          Length = 209

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
 Frame = -3

Query: 633 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTR---WGVTRLPRKTHRGLRKVACIGAWHPAR 463
           VP+D VF++ + ++++GVTKGKG+ GVV R    G +R   ++ R     +  G+  P+R
Sbjct: 97  VPVD-VFKEGDKVNVLGVTKGKGFAGVVKRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSR 155

Query: 462 VSYTVARAGQNGYHHRTEMNKKVYKI 385
                  AG+ G  ++T  N  + K+
Sbjct: 156 TFKGTRMAGRMGGKNKTVQNLVIVKV 181

---

>RL3_BACSU (P42920) 50S ribosomal protein L3 (BL3)|
          Length = 209

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 463
           +EV ++ +F   E++D+ GV+KGKG++G + R G +R P     R  R+   +G   P R
Sbjct: 95  QEVKVE-IFSAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVDPNR 153

Query: 462 VSYTVARAGQNGYHHRTEMNKKVYKI 385
           V       G+ G    T  N ++ K+
Sbjct: 154 VFKGKLLPGRMGGEQITVQNLEIVKV 179

---

>RL3_TROWT (Q83FY6) 50S ribosomal protein L3|
          Length = 210

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIGAWH-PARVSYTV 448
           +FQ+ +++D++G +KGKG+ G + R           +HR  RK   +GA   P+RV    
Sbjct: 96  IFQEGQLVDVVGKSKGKGFSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGT 155

Query: 447 ARAGQNGYHHRTEMNKKVYKI 385
             AG+ G    T  N ++ KI
Sbjct: 156 RMAGRLGSSRVTVHNLRLVKI 176

---

>RL3_TROW8 (Q83I78) 50S ribosomal protein L3|
          Length = 210

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIGAWH-PARVSYTV 448
           +FQ+ +++D++G +KGKG+ G + R           +HR  RK   +GA   P+RV    
Sbjct: 96  IFQEGQLVDVVGKSKGKGFSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGT 155

Query: 447 ARAGQNGYHHRTEMNKKVYKI 385
             AG+ G    T  N ++ KI
Sbjct: 156 RMAGRLGSSRVTVHNLRLVKI 176

---

>RL3_THETN (Q8R7V4) 50S ribosomal protein L3|
          Length = 210

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
 Frame = -3

Query: 636 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGA-WH 472
           E+ +D +F+  + +D+ G++KGKG+ GV+ R+G  R P     K H   R+V  +GA   
Sbjct: 96  EIKVD-IFKPGDRVDVTGISKGKGFAGVIKRYGARRGPMSHGSKYH---RRVGSMGATTD 151

Query: 471 PARVSYTVARAGQNGYHHRTEMNKKVYKI 385
           P R        G+ G    T  N +V K+
Sbjct: 152 PGRTFKGKKMPGRMGSDRVTIQNLEVVKV 180

---

>RL3_STRP1 (Q9A1X4) 50S ribosomal protein L3|
          Length = 208

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = -3

Query: 615 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 439
           F+  +++D+ G++KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGISKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159

Query: 438 GQNGYHHRTEMNKKVYKI 385
           G+ G +  T  N ++ ++
Sbjct: 160 GRMGGNRVTVQNLEIVQV 177

---

>RL3_OCEIH (Q8ETY2) 50S ribosomal protein L3|
          Length = 209

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
 Frame = -3

Query: 651 NFFE--KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACI 484
           N FE  +E+ +D +F+  E ID+ G +KGKG++GV+ R G  R P  TH     R    +
Sbjct: 89  NSFEVGQEIKVD-IFESGEKIDVTGTSKGKGFQGVIKRHGQQRGP-TTHGSHFHRAPGAM 146

Query: 483 GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKI 385
           G   P RV       G  G    T  N +V  +
Sbjct: 147 GVIDPMRVFKGKKLPGHMGSEQVTIQNLEVVSV 179

---

>RL3_STRP6 (Q5XED5) 50S ribosomal protein L3|
          Length = 208

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 1/139 (0%)
 Frame = -3

Query: 615 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 439
           F+  +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159

Query: 438 GQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKG 259
           G+ G +  T  N ++ ++                               +++ + +++KG
Sbjct: 160 GRMGGNRVTVQNLEIVQV-------------------------------ILEKNVILVKG 188

Query: 258 CCVGPKKRVVTLRQXXAEA 202
              G KK ++T++     A
Sbjct: 189 NVPGAKKSLITIKSAVKAA 207

---

>RL3_THEMA (P38515) 50S ribosomal protein L3|
          Length = 207

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR----KTHRGLRKVACIGAWHPARVSYT 451
           VF+K E +D+ G TKG+G+ G + RWG +  P+    K HR L  V       PA++   
Sbjct: 97  VFEKGEYVDVTGWTKGRGFAGAMKRWGFSGGPKSHGSKFHRELGSVG--QHTEPAKIWKG 154

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
               G+ G    T  N +V  I
Sbjct: 155 KKMPGRYGNERVTVRNLQVVDI 176

---

>RL3_STRP8 (P60452) 50S ribosomal protein L3|
          Length = 208

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = -3

Query: 615 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 439
           F+  +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159

Query: 438 GQNGYHHRTEMNKKVYKI 385
           G+ G +  T  N ++ ++
Sbjct: 160 GRMGGNRVTVQNLEIVQV 177

---

>RL3_STRP3 (P60451) 50S ribosomal protein L3|
          Length = 208

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = -3

Query: 615 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 439
           F+  +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159

Query: 438 GQNGYHHRTEMNKKVYKI 385
           G+ G +  T  N ++ ++
Sbjct: 160 GRMGGNRVTVQNLEIVQV 177

---

>RL3_STRA5 (Q8E2D1) 50S ribosomal protein L3|
          Length = 208

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = -3

Query: 615 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 439
           F+  +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159

Query: 438 GQNGYHHRTEMNKKVYKI 385
           G+ G +  T  N ++ ++
Sbjct: 160 GRMGGNRVTVQNLEIVQV 177

---

>RL3_STRA3 (Q8E7T8) 50S ribosomal protein L3|
          Length = 208

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = -3

Query: 615 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 439
           F+  +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159

Query: 438 GQNGYHHRTEMNKKVYKI 385
           G+ G +  T  N ++ ++
Sbjct: 160 GRMGGNRVTVQNLEIVQV 177

---

>RM03_BOVIN (Q3ZBX6) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)|
          Length = 348

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
 Frame = -3

Query: 621 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 457
           A F+  + +D+   T GKG++GV+ RWG    P      KTH   R+   I     ARV 
Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTH---RRPGAISTGDVARVW 252

Query: 456 YTVARAGQNGYHHRTEMNKKVYKI 385
                 GQ G   RT    KV++I
Sbjct: 253 PGTKMPGQLGNVDRTAFGLKVWRI 276

---

>RL3_SPIKU (P60457) 50S ribosomal protein L3|
          Length = 258

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 1/135 (0%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWHPARVSYTVAR 442
           +F   E +D+ G +KGKG+ G + R   +R P     G  R V  +GA  P R+  +   
Sbjct: 98  IFTAGEFVDVTGTSKGKGFTGSIKRHNYSRGPMGHGSGYHRGVGSMGAIAPNRILKSKKM 157

Query: 441 AGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 262
            G  G    T  N ++  I                TEK+                 L++K
Sbjct: 158 PGHIGTEKVTIQNLEIIAID---------------TEKNA----------------LLVK 186

Query: 261 GCCVGPKKRVVTLRQ 217
           G   GPKK+ V +++
Sbjct: 187 GSIPGPKKQFVVIKE 201

---

>RL3_AQUAE (O66431) 50S ribosomal protein L3|
          Length = 241

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIG 481
           +++ ++ VF+  +++D+ G++KG+G+ G + RW     P+   HR  R V  IG
Sbjct: 96  QQLKVEDVFKPGDLVDVWGISKGRGFAGAMKRWDFAGFPKSHGHRYHRAVGAIG 149

---

>RM03_HUMAN (P09001) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)|
          Length = 348

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
 Frame = -3

Query: 621 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 457
           A F+  + +D+   T GKG++GV+ RWG    P      KTH   R+   +      RV 
Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTH---RRPGAVATGDIGRVW 252

Query: 456 YTVARAGQNGYHHRTEMNKKVYKI 385
                 G+ G  +RTE   KV++I
Sbjct: 253 PGTKMPGKMGNIYRTEYGLKVWRI 276

---

>RM03_RAT (P18665) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)|
          Length = 347

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
 Frame = -3

Query: 621 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 457
           A F+  + +D+   T GKG++GV+ RWG    P      KTH   R+   I     ARV 
Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPASHGQTKTH---RRPGAISTGDIARVW 252

Query: 456 YTVARAGQNGYHHRTEMNKKVYKI 385
                 G+ G  +RT    KV+++
Sbjct: 253 PGTKMPGKMGNQNRTVYGLKVWRV 276

---

>RL3_STRMU (Q8DS16) 50S ribosomal protein L3|
          Length = 208

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = -3

Query: 615 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 439
           F+  +++D+ G TKGKG++G + R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FEAGDVVDVTGTTKGKGFQGAIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159

Query: 438 GQNGYHHRTEMNKKVYKI 385
           G+ G +  T  N +V ++
Sbjct: 160 GRMGGNRVTVQNLEVVQV 177

---

>RM03_MOUSE (Q99N95) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)|
          Length = 348

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
 Frame = -3

Query: 621 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 457
           A F+  + +D+   T GKG++GV+ RWG    P      KTH   R+   I     ARV 
Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPASHGQTKTH---RRPGAISTGDIARVW 252

Query: 456 YTVARAGQNGYHHRTEMNKKVYKI 385
                 G+ G  +RT    KV+++
Sbjct: 253 PGTKMPGRMGNQNRTVYGLKVWRV 276

---

>RL3_BACHD (Q9Z9L4) 50S ribosomal protein L3|
          Length = 209

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPAR 463
           +E+ +DA F + +++D+ G +KGKG+ G + R    R P     R  R+   +G   P R
Sbjct: 95  QEIKVDA-FAEGDIVDVTGTSKGKGFAGAIKRHNQARGPMSHGSRYHRRPGSMGPVDPNR 153

Query: 462 VSYTVARAGQNGYHHRTEMNKKVYKI 385
           V    A  G+ G    T  N ++ K+
Sbjct: 154 VFKGKALPGRMGGEQVTVQNLEIIKV 179

---

>RL3_CORDI (P60453) 50S ribosomal protein L3|
          Length = 218

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HPARVSYTV 448
           +F+    +D+ G TKGKGY G + R G              R+V  IGA   P RV    
Sbjct: 105 IFEGINFVDVTGTTKGKGYAGAMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGT 164

Query: 447 ARAGQNGYHHRTEMNKKVYKI 385
             AG+ G    T  N KV KI
Sbjct: 165 RMAGRMGSDRVTTQNLKVQKI 185

---

>RL3_LEPIN (Q9XD36) 50S ribosomal protein L3|
          Length = 206

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = -3

Query: 627 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGA-WHPARVSY 454
           I  VF   +++ + GV+KG+GY+GVV R G    P     R  R    +GA   P+RV  
Sbjct: 98  IQDVFAVSDVVKVTGVSKGRGYQGVVKRHGHAGGPGAHGSRFHRHPGSMGANSTPSRVFK 157

Query: 453 TVARAGQNGYHHRTEMNKKVYKIGK 379
            V   G+ G    T  N KV +I +
Sbjct: 158 GVKLPGRTGSQKTTVRNLKVVRINE 182

---

>RL3_LEPIC (Q72NG1) 50S ribosomal protein L3|
          Length = 206

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = -3

Query: 627 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGA-WHPARVSY 454
           I  VF   +++ + GV+KG+GY+GVV R G    P     R  R    +GA   P+RV  
Sbjct: 98  IQDVFAVSDVVKVTGVSKGRGYQGVVKRHGHAGGPGAHGSRFHRHPGSMGANSTPSRVFK 157

Query: 453 TVARAGQNGYHHRTEMNKKVYKIGK 379
            V   G+ G    T  N KV +I +
Sbjct: 158 GVKLPGRTGSQKTTVRNLKVVRINE 182

---

>RK3_GUITH (O46894) Chloroplast 50S ribosomal protein L3|
          Length = 204

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
 Frame = -3

Query: 669 KVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH--RGLRK 496
           KVD  + F   +    ++F+  +++ + GV+ GKG+ G V R   TR P  TH  +  R+
Sbjct: 84  KVDATHTFTIAQQLDVSIFELGQIVSVSGVSIGKGFAGTVKRHNFTRGP-MTHGSKNHRE 142

Query: 495 VACIGAWH-PARVSYTVARAGQNGYHHRTEMNKKVYKIGK 379
              IG    PA+V      AG+ G H  T  N  V  + K
Sbjct: 143 PGSIGQGSTPAKVHKGKKMAGRLGGHQVTTKNLTVVHLDK 182

---

>RL3_GEOSL (P60454) 50S ribosomal protein L3|
          Length = 210

 Score = 39.7 bits (91), Expect = 0.009
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
 Frame = -3

Query: 615 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIG-AWHPARVSYTVA 445
           F+  E ID+ G + GKG++GV+ RWG  R  R +H     R    IG + +P+RV     
Sbjct: 102 FEVGEYIDVTGTSIGKGFQGVIKRWGF-RGGRSSHGSCFHRAPGSIGSSAYPSRVFKNKK 160

Query: 444 RAGQNGYHHRTEMNKKVYKI 385
             GQ G    T    +V ++
Sbjct: 161 MPGQLGNERVTVQRLQVVRV 180

---

>RL3_THETH (P52860) 50S ribosomal protein L3|
          Length = 206

 Score = 39.7 bits (91), Expect = 0.009
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTV 448
           +F+  E +D+ G +KG+G+ GV+ RW     P     H+  R    IG    P RV    
Sbjct: 95  IFKPGERVDVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGK 154

Query: 447 ARAGQNGYHHRTEMNKKVYKI 385
             AG  G    T MN +V  +
Sbjct: 155 KMAGHYGAERVTVMNLEVVDV 175

---

>RL3_THET8 (Q5SHN8) 50S ribosomal protein L3|
          Length = 206

 Score = 39.7 bits (91), Expect = 0.009
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTV 448
           +F+  E +D+ G +KG+G+ GV+ RW     P     H+  R    IG    P RV    
Sbjct: 95  IFKPGERVDVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGK 154

Query: 447 ARAGQNGYHHRTEMNKKVYKI 385
             AG  G    T MN +V  +
Sbjct: 155 KMAGHYGAERVTVMNLEVVDV 175

---

>RK3B_ARATH (Q9LRN8) 50S ribosomal protein L3-2, chloroplast precursor|
          Length = 324

 Score = 39.3 bits (90), Expect = 0.012
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
 Frame = -3

Query: 615 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-----THRGLRKVACIGAWHPARVSYT 451
           F   + +D+ G+T+GKG++G + R G + +P       +HR         A  P +V   
Sbjct: 176 FVPGQYVDVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDA--PGKVFKG 233

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
              AG+ G   RT  N  VYKI
Sbjct: 234 RKMAGRMGADQRTVKNVWVYKI 255

---

>RL3_STRR6 (Q8CWV8) 50S ribosomal protein L3|
          Length = 208

 Score = 39.3 bits (90), Expect = 0.012
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = -3

Query: 615 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 439
           F   +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159

Query: 438 GQNGYHHRTEMNKKVYKI 385
           G+ G    T  N +V ++
Sbjct: 160 GRMGGDRVTIQNLEVVQV 177

---

>RL3_STRPN (Q97SV5) 50S ribosomal protein L3|
          Length = 208

 Score = 39.3 bits (90), Expect = 0.012
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = -3

Query: 615 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 439
           F   +++D+ G +KGKG++GV+ R G +R P     R  R+   +G   P RV      A
Sbjct: 100 FAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159

Query: 438 GQNGYHHRTEMNKKVYKI 385
           G+ G    T  N +V ++
Sbjct: 160 GRMGGDRVTIQNLEVVQV 177

---

>RL3_CORGL (Q8NT09) 50S ribosomal protein L3|
          Length = 218

 Score = 39.3 bits (90), Expect = 0.012
 Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHPARVSYTV 448
           +F   + +D+ G TKGKGY G + R G              R+V  IG A  P R+    
Sbjct: 105 IFNDIKFVDVTGTTKGKGYAGAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGK 164

Query: 447 ARAGQNGYHHRTEMNKKVYKI 385
             AG+ G    T  N KV KI
Sbjct: 165 RMAGRMGNDRVTTQNLKVQKI 185

---

>RL3_DEIRA (Q9RXK2) 50S ribosomal protein L3|
          Length = 211

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHR-----GLRKVACIGAWHP 469
           +F + E ID  G +KGKG +GV+ RW     P     +K HR     G RK        P
Sbjct: 95  IFAEGEKIDATGTSKGKGTQGVMKRWNFAGGPASHGSKKWHRRPGSIGQRKT-------P 147

Query: 468 ARVSYTVARAGQNGYHHRTEMNKKVYKI 385
            RV      AG  G    T  N +V +I
Sbjct: 148 GRVYKGKRMAGHMGMERVTVQNLEVVEI 175

---

>RL3_NEIMB (P60444) 50S ribosomal protein L3|
          Length = 214

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
 Frame = -3

Query: 621 AVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYT 451
           ++F+  +++D+ G +KGKG+ G + R  +G  R      R  R    IG A  P RV   
Sbjct: 102 SMFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPG 161

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
              AGQ G    T    +V ++
Sbjct: 162 KRMAGQYGNTKATVQKLEVVRV 183

---

>RL3_NEIMA (P60443) 50S ribosomal protein L3|
          Length = 214

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
 Frame = -3

Query: 621 AVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYT 451
           ++F+  +++D+ G +KGKG+ G + R  +G  R      R  R    IG A  P RV   
Sbjct: 102 SMFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPG 161

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
              AGQ G    T    +V ++
Sbjct: 162 KRMAGQYGNTKATVQKLEVVRV 183

---

>RL3_MYCPU (Q98PY0) 50S ribosomal protein L3|
          Length = 266

 Score = 38.5 bits (88), Expect = 0.020
 Identities = 36/135 (26%), Positives = 56/135 (41%)
 Frame = -3

Query: 621 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVAR 442
           ++F   E +D+ G++KGKG+ G + R    ++  K+H G       G   P R       
Sbjct: 97  SIFTPGEFVDVTGISKGKGFAGTIKRHN-QKIGPKSHGG------GGGSKPVR------- 142

Query: 441 AGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 262
             Q G       NK V  +   G   H+  T     E  +T          VK + L++K
Sbjct: 143 --QTGSLGDISGNKVVKGMTMPGHLGHEQVT-IQNLEVIMTD---------VKNNILLVK 190

Query: 261 GCCVGPKKRVVTLRQ 217
           G   GPKK  V +++
Sbjct: 191 GAVPGPKKGFVVIKE 205

---

>RL3_STAAW (P60450) 50S ribosomal protein L3|
          Length = 220

 Score = 38.1 bits (87), Expect = 0.026
 Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 8/148 (5%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 460
           +EV +D  F   ++ID+ GV+KGKG++G + R G +R P                     
Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP--------------------- 140

Query: 459 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 292
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 291 VVKAD----YLMIKGCCVGPKKRVVTLR 220
           VV+ D     +++KG   GPKK +V +R
Sbjct: 185 VVQVDTENKVILVKGNVPGPKKGLVEIR 212

---

>RL3_STAAS (Q6G771) 50S ribosomal protein L3|
          Length = 220

 Score = 38.1 bits (87), Expect = 0.026
 Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 8/148 (5%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 460
           +EV +D  F   ++ID+ GV+KGKG++G + R G +R P                     
Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP--------------------- 140

Query: 459 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 292
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 291 VVKAD----YLMIKGCCVGPKKRVVTLR 220
           VV+ D     +++KG   GPKK +V +R
Sbjct: 185 VVQVDTENKVILVKGNVPGPKKGLVEIR 212

---

>RL3_STAAR (Q6GEI3) 50S ribosomal protein L3|
          Length = 220

 Score = 38.1 bits (87), Expect = 0.026
 Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 8/148 (5%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 460
           +EV +D  F   ++ID+ GV+KGKG++G + R G +R P                     
Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP--------------------- 140

Query: 459 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 292
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 291 VVKAD----YLMIKGCCVGPKKRVVTLR 220
           VV+ D     +++KG   GPKK +V +R
Sbjct: 185 VVQVDTENKVILVKGNVPGPKKGLVEIR 212

---

>RL3_STAAN (P60449) 50S ribosomal protein L3|
          Length = 220

 Score = 38.1 bits (87), Expect = 0.026
 Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 8/148 (5%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 460
           +EV +D  F   ++ID+ GV+KGKG++G + R G +R P                     
Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP--------------------- 140

Query: 459 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 292
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 291 VVKAD----YLMIKGCCVGPKKRVVTLR 220
           VV+ D     +++KG   GPKK +V +R
Sbjct: 185 VVQVDTENKVILVKGNVPGPKKGLVEIR 212

---

>RL3_STAAM (P60448) 50S ribosomal protein L3|
          Length = 220

 Score = 38.1 bits (87), Expect = 0.026
 Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 8/148 (5%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 460
           +EV +D  F   ++ID+ GV+KGKG++G + R G +R P                     
Sbjct: 103 QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP--------------------- 140

Query: 459 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 292
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 141 ------MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 184

Query: 291 VVKAD----YLMIKGCCVGPKKRVVTLR 220
           VV+ D     +++KG   GPKK +V +R
Sbjct: 185 VVQVDTENKVILVKGNVPGPKKGLVEIR 212

---

>RL3_STAAC (Q5HDV8) 50S ribosomal protein L3|
          Length = 209

 Score = 38.1 bits (87), Expect = 0.026
 Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 8/148 (5%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 460
           +EV +D  F   ++ID+ GV+KGKG++G + R G +R P                     
Sbjct: 92  QEVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP--------------------- 129

Query: 459 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYG 292
                      + HR          G VG  + DAS  F + +K    MGG      +  
Sbjct: 130 ------MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLE 173

Query: 291 VVKAD----YLMIKGCCVGPKKRVVTLR 220
           VV+ D     +++KG   GPKK +V +R
Sbjct: 174 VVQVDTENKVILVKGNVPGPKKGLVEIR 201

---

>RL3_STAES (Q8CRG0) 50S ribosomal protein L3|
          Length = 220

 Score = 37.7 bits (86), Expect = 0.034
 Identities = 17/39 (43%), Positives = 27/39 (69%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 523
           +EV +D  F+  ++ID+ GV+KGKG++G + R G  R P
Sbjct: 103 QEVSVDT-FETGDIIDVTGVSKGKGFQGAIKRHGQGRGP 140

---

>RL3_STAEQ (Q5HLZ9) 50S ribosomal protein L3|
          Length = 220

 Score = 37.7 bits (86), Expect = 0.034
 Identities = 17/39 (43%), Positives = 27/39 (69%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 523
           +EV +D  F+  ++ID+ GV+KGKG++G + R G  R P
Sbjct: 103 QEVSVDT-FETGDIIDVTGVSKGKGFQGAIKRHGQGRGP 140

---

>RL3_COREF (Q8FS80) 50S ribosomal protein L3|
          Length = 218

 Score = 37.7 bits (86), Expect = 0.034
 Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHPARVSYTV 448
           +F   + +D+ G +KGKGY G + R G              R+V  IG A  P R+    
Sbjct: 105 IFNDVKFVDVTGTSKGKGYAGAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGK 164

Query: 447 ARAGQNGYHHRTEMNKKVYKI 385
             AG+ G    T  N KV KI
Sbjct: 165 RMAGRMGNDRVTTQNLKVQKI 185

---

>RL3_VIBPA (Q87T13) 50S ribosomal protein L3|
          Length = 209

 Score = 37.7 bits (86), Expect = 0.034
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 451
           +F + + +D+ G +KGKG++G V RW   R    TH      R    IG    P RV   
Sbjct: 100 LFNETKKVDVTGTSKGKGFQGAVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
              AG  G    T  N ++ ++
Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180

---

>RL3_BUCBP (Q89A68) 50S ribosomal protein L3|
          Length = 214

 Score = 37.4 bits (85), Expect = 0.044
 Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTV 448
           +F   + +DIIG +KGKG+ G V RW            L  R    IG    P RV    
Sbjct: 102 LFSNIKKVDIIGTSKGKGFCGTVKRWNFHTQDATHGNSLSHRAPGSIGQNQTPGRVFKGK 161

Query: 447 ARAGQNGYHHRTEMNKKVYKI 385
             AG  G H  T  N  + KI
Sbjct: 162 KMAGHLGNHRVTVQNLDIVKI 182

---

>RL3_BORPE (Q7VTD3) 50S ribosomal protein L3|
          Length = 233

 Score = 37.4 bits (85), Expect = 0.044
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
 Frame = -3

Query: 633 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPAR 463
           + +++VF+  + +D+ G + GKG+ G + R  +G  R      R  R    IG A  P R
Sbjct: 113 IAVESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGR 172

Query: 462 VSYTVARAGQNGYHHRTEMNKKVYKI 385
           +      +G  G   RT  N  V ++
Sbjct: 173 IFPGKRMSGHMGDVTRTVQNLDVVRV 198

---

>RL3_BORPA (Q7W2F6) 50S ribosomal protein L3|
          Length = 233

 Score = 37.4 bits (85), Expect = 0.044
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
 Frame = -3

Query: 633 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPAR 463
           + +++VF+  + +D+ G + GKG+ G + R  +G  R      R  R    IG A  P R
Sbjct: 113 IAVESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGR 172

Query: 462 VSYTVARAGQNGYHHRTEMNKKVYKI 385
           +      +G  G   RT  N  V ++
Sbjct: 173 IFPGKRMSGHMGDVTRTVQNLDVVRV 198

---

>RL3_BORBR (Q7WRC5) 50S ribosomal protein L3|
          Length = 233

 Score = 37.4 bits (85), Expect = 0.044
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
 Frame = -3

Query: 633 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPAR 463
           + +++VF+  + +D+ G + GKG+ G + R  +G  R      R  R    IG A  P R
Sbjct: 113 IAVESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGR 172

Query: 462 VSYTVARAGQNGYHHRTEMNKKVYKI 385
           +      +G  G   RT  N  V ++
Sbjct: 173 IFPGKRMSGHMGDVTRTVQNLDVVRV 198

---

>RL3_STAHJ (Q4L8B4) 50S ribosomal protein L3|
          Length = 220

 Score = 37.0 bits (84), Expect = 0.058
 Identities = 16/39 (41%), Positives = 26/39 (66%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 523
           +EV +D  F+  ++ID+ G +KGKG++G + R G  R P
Sbjct: 103 QEVTVDT-FEAGDIIDVTGTSKGKGFQGAIKRHGQARGP 140

---

>RM03_CAEEL (P49404) Putative mitochondrial 39S ribosomal protein L3|
          Length = 403

 Score = 37.0 bits (84), Expect = 0.058
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
 Frame = -3

Query: 630 PIDAV-FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVS 457
           P+DA  F   + +   G T   G++G + RWG+   P R+T +  R++  +G+   AR+ 
Sbjct: 212 PLDARHFGVGQYVTATGKTIDWGFQGGMHRWGMRGQPTRRTTKSHRRIGSVGSVGDARIW 271

Query: 456 YTVARAGQNGYHHRTEMNKKVYKI 385
                 G  GY  RT    ++ +I
Sbjct: 272 PGKRMPGHMGYEWRTVSGLEIVRI 295

---

>RK3_TOBAC (O80360) 50S ribosomal protein L3, chloroplast precursor (Fragment)|
          Length = 259

 Score = 37.0 bits (84), Expect = 0.058
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
 Frame = -3

Query: 693 INGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 514
           I+G  +  K+D+G            +F++ +++D+ G T GKG++G + R    R  + T
Sbjct: 130 IDGFEVTQKLDFG-----------ELFKEGDLVDVSGTTIGKGFQGGIKRHNFKR-GQMT 177

Query: 513 H--RGLRKVACIGA-WHPARVSYTVARAGQNGYHHRTEMNKKVYKI 385
           H  +  R++  IGA   P RV       G+ G   R     K+ KI
Sbjct: 178 HGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKI 223

---

>RL3_VIBVY (Q7MPI8) 50S ribosomal protein L3|
          Length = 209

 Score = 37.0 bits (84), Expect = 0.058
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 451
           +F + + +D+ G +KGKG++G V RW   R    TH      R    IG    P RV   
Sbjct: 100 LFNEVKKVDVTGTSKGKGFQGTVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
              AG  G    T  N ++ ++
Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180

---

>RL3_VIBVU (Q8DE39) 50S ribosomal protein L3|
          Length = 209

 Score = 37.0 bits (84), Expect = 0.058
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 451
           +F + + +D+ G +KGKG++G V RW   R    TH      R    IG    P RV   
Sbjct: 100 LFNEVKKVDVTGTSKGKGFQGTVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
              AG  G    T  N ++ ++
Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180

---

>RL3_VIBCH (Q9KNY4) 50S ribosomal protein L3|
          Length = 209

 Score = 37.0 bits (84), Expect = 0.058
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 451
           +F + + +D+ G +KGKG++G V RW   R    TH      R    IG    P RV   
Sbjct: 100 LFNEVKKVDVTGTSKGKGFQGAVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
              AG  G    T  N ++ ++
Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180

---

>RL3_BUCAP (Q8K950) 50S ribosomal protein L3|
          Length = 209

 Score = 37.0 bits (84), Expect = 0.058
 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 451
           +F   + +D+ G++KGKG+ G V RW   R    TH      R    IG    P RV   
Sbjct: 100 IFNDIKKVDVTGISKGKGFSGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGRVFKG 158

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
              AG  G +  T  N  + KI
Sbjct: 159 KKMAGHLGNNRVTVQNLNIVKI 180

---

>RL3_TREPA (O83219) 50S ribosomal protein L3|
          Length = 208

 Score = 36.6 bits (83), Expect = 0.075
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH--RGLRKVACIG-AWHPARVSYTV 448
           V +    +D+  ++KGKG++GVV RWG +   R +H  +  R+    G    P R    V
Sbjct: 98  VLESVRYLDVCALSKGKGFQGVVKRWGFSG-GRSSHGSKFHREAGSTGQCTSPGRTFKNV 156

Query: 447 ARAGQNGYHHRTEMNKKVYKI 385
              G+ G    T  N ++ +I
Sbjct: 157 KMPGRMGAERVTVQNLRIERI 177

---

>RL3_MYCGA (O52332) 50S ribosomal protein L3|
          Length = 236

 Score = 36.6 bits (83), Expect = 0.075
 Identities = 22/77 (28%), Positives = 40/77 (51%)
 Frame = -3

Query: 627 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 448
           ++ +FQ+ +++D+   TKG+G+ G + RW   ++  K H         GA +P R   +V
Sbjct: 96  VEELFQEGQVVDVQARTKGRGFTGAIKRWNF-KIGSKGH---------GAGYPHRFQGSV 145

Query: 447 ARAGQNGYHHRTEMNKK 397
            +AG+ G   +  M  K
Sbjct: 146 -QAGRGGSQAQRVMKGK 161

---

>RL3_PSEAE (Q9HWD5) 50S ribosomal protein L3|
          Length = 211

 Score = 36.2 bits (82), Expect = 0.098
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = -3

Query: 636 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 541
           ++ +D +FQ  +M+D+ G +KGKG+ G + RW
Sbjct: 95  QITVD-LFQAGQMVDVTGESKGKGFAGTIKRW 125

---

>RL3_FUSNN (Q8RIF5) 50S ribosomal protein L3|
          Length = 211

 Score = 36.2 bits (82), Expect = 0.098
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG--AWH 472
           +E+ +D V  +   +DI G +KGKG  GV+ + G +  R      R  R    IG  +W 
Sbjct: 93  QEIKVD-VLTEVGYVDITGTSKGKGTSGVMKKHGFSGNRASHGVSRNHRLGGSIGMSSW- 150

Query: 471 PARVSYTVARAGQNGYHHRTEMNKKVYKI 385
           P +V      AGQ+G    T  N KV K+
Sbjct: 151 PGKVLKGKKMAGQHGNATVTVQNLKVVKV 179

---

>RL3_WIGBR (Q8D212) 50S ribosomal protein L3|
          Length = 215

 Score = 36.2 bits (82), Expect = 0.098
 Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
 Frame = -3

Query: 669 KVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RK 496
           KVD    F+  +V     F     ++I G++KGKG+ G + RW            L  R 
Sbjct: 83  KVDKNSKFYVGQVLSINTFININKVNITGISKGKGFSGTMKRWNFHGQDASHGNSLSHRA 142

Query: 495 VACIGA-WHPARVSYTVARAGQNGYHHRTEMNKKVYKI 385
              IG    P +V      +G  GY+  T  N  V KI
Sbjct: 143 PGSIGQNQTPGKVFKGKKMSGHLGYNKNTVKNLFVVKI 180

---

>RL3_MYCTU (P60442) 50S ribosomal protein L3|
          Length = 217

 Score = 36.2 bits (82), Expect = 0.098
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSY 454
           +F     +D+ G +KGKG+ G + R      G +   +  HR  R  +  G   PARV  
Sbjct: 105 IFADGSYVDVTGTSKGKGFAGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPARVFK 162

Query: 453 TVARAGQNGYHHRTEMNKKVYKI 385
               AG+ G    T +N  V+K+
Sbjct: 163 GTRMAGRMGNDRVTVLNLLVHKV 185

---

>RL3_MYCBO (P60441) 50S ribosomal protein L3|
          Length = 217

 Score = 36.2 bits (82), Expect = 0.098
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSY 454
           +F     +D+ G +KGKG+ G + R      G +   +  HR  R  +  G   PARV  
Sbjct: 105 IFADGSYVDVTGTSKGKGFAGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPARVFK 162

Query: 453 TVARAGQNGYHHRTEMNKKVYKI 385
               AG+ G    T +N  V+K+
Sbjct: 163 GTRMAGRMGNDRVTVLNLLVHKV 185

---

>RL3_BORBU (P94267) 50S ribosomal protein L3|
          Length = 206

 Score = 36.2 bits (82), Expect = 0.098
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
 Frame = -3

Query: 636 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHP 469
           E+ +D VF+  + +D+ G TKGKG++G + R   +  P     K HR L       A  P
Sbjct: 94  EIKVD-VFKSVKYVDVTGTTKGKGFQGAMKRHNFSGGPSSHGSKFHRHLGGTG--QATTP 150

Query: 468 ARVSYTVARAGQNGYHHRTEMNKKVYKI 385
           AR       AG+   + +T  N +V  I
Sbjct: 151 ARTFKGTKMAGRMAGNQQTIQNLEVVLI 178

---

>RL3_LACPL (Q88XY6) 50S ribosomal protein L3|
          Length = 209

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = -3

Query: 636 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 460
           EV  D +F   + +D+ G+TKG GY+G + + G +R P     R  R+   +GA    RV
Sbjct: 97  EVKAD-IFAAGDAVDVTGITKGHGYQGNIHKDGQSRGPMAHGSRYHRRPGSMGA-IINRV 154

Query: 459 SYTVARAGQNGYHHRTEMNKKVYK 388
                  G+ G H RT  N ++ +
Sbjct: 155 FKGKKLPGRMGNHQRTMQNLQIVR 178

---

>RK3A_ARATH (Q9SKX4) 50S ribosomal protein L3-1, chloroplast precursor|
          Length = 271

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW----GVTRLPRKTHRGLRKVACIGAWH 472
           +++  D +F++ +++D+ G T GKG++G + R     G      K+HR L  +       
Sbjct: 149 QKLVFDEIFKEGDLVDVAGTTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIG--AGTT 206

Query: 471 PARVSYTVARAGQNGYHHRTEMNK-KVYKIGK 379
           P RV       G+ G   RT++ K K+ K+ K
Sbjct: 207 PGRVYKGKKMPGRMG-GTRTKIRKLKIVKVDK 237

---

>RL3_CHLCV (Q824Q1) 50S ribosomal protein L3|
          Length = 221

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 37/136 (27%), Positives = 53/136 (38%), Gaps = 2/136 (1%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 445
           V +    +DI GV+KGKG++GV+ R+G    P+    G  R    IG    P R      
Sbjct: 111 VLEDISSVDISGVSKGKGFQGVMKRFGFRGGPKTHGSGFHRHAGSIGMRSTPGRCFPGSK 170

Query: 444 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 265
           R    G  + T  N +V KI                 EK +                L++
Sbjct: 171 RPSHMGTVNVTVKNLEVVKID---------------LEKKV----------------LLV 199

Query: 264 KGCCVGPKKRVVTLRQ 217
           KG   GP+  VV +R+
Sbjct: 200 KGAIPGPRGSVVVIRR 215

---

>RL3_XANCP (Q8PC49) 50S ribosomal protein L3|
          Length = 216

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYT 451
           +F+  + +D+ GVTKGKG++G + R+   R+   TH         G+      P RV   
Sbjct: 107 IFEVGQKVDVQGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPG 165

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
              +G  G   ++  N +V K+
Sbjct: 166 KKMSGHMGAVQQSTQNLEVVKV 187

---

>RL3_XANAC (Q8PNS4) 50S ribosomal protein L3|
          Length = 216

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYT 451
           +F+  + +D+ GVTKGKG++G + R+   R+   TH         G+      P RV   
Sbjct: 107 IFEVGQKVDVQGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPG 165

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
              +G  G   ++  N +V K+
Sbjct: 166 KKMSGHMGAVQQSTQNLEVVKV 187

---

>RL3_MYCCT (P10134) 50S ribosomal protein L3|
          Length = 223

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
 Frame = -3

Query: 633 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWHPA 466
           + +  +F   E +D+ G++KGKG+ G + R   +R P       HRG+  +  I      
Sbjct: 94  INVSDIFVSGEYVDVTGISKGKGFAGGIKRHNYSRGPMAHGSGYHRGIGSMGAI----IN 149

Query: 465 RVSYTVARAGQNGYHHRTEMNKKVYKI 385
           R+  +    G  G   RT  N ++  I
Sbjct: 150 RIFKSKKMPGHMGNAKRTIQNLEIIAI 176

---

>RM09_YEAST (P31334) 60S ribosomal protein L9, mitochondrial precursor (YmL9)|
          Length = 269

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
 Frame = -3

Query: 615 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW----HPARVSYTV 448
           F++ + +D+  V+KGKG+ GV+ R+G   L R +H         G++     P RV    
Sbjct: 160 FKEGQYVDVRSVSKGKGFTGVMKRYGFKGL-RASHGTSIMHRHGGSYGQNQDPGRVLPGR 218

Query: 447 ARAGQNGYHHRTEMNKKVYKI 385
              G  G  H T  N KV K+
Sbjct: 219 KMPGHMGNEHVTIQNVKVLKV 239

---

>RL3_MYCPE (Q8EUB3) 50S ribosomal protein L3|
          Length = 310

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 33/147 (22%), Positives = 58/147 (39%), Gaps = 1/147 (0%)
 Frame = -3

Query: 657 GYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA 478
           GYN  +K + +D +F   + +D   +TKGKG+ G + RW              KV  +G 
Sbjct: 87  GYNVGDK-ILVD-IFNSGDKVDAQAITKGKGFTGAIKRWNF------------KVGPLG- 131

Query: 477 WHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPH 298
            H A            GY HR + +    + G  GQ              ++  +     
Sbjct: 132 -HGA------------GYPHRYQGSISFGRGGSQGQRVPKGQKMSGHYGHELVTISNLTV 178

Query: 297 YGV-VKADYLMIKGCCVGPKKRVVTLR 220
             + ++ + +++KG   GP   +V L+
Sbjct: 179 VSIELEKNLILVKGSVPGPVNSLVLLK 205

---

>RL3_COXBU (Q83ES4) 50S ribosomal protein L3|
          Length = 217

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
 Frame = -3

Query: 636 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-P 469
           E+ +D +F++ +++D+ G+T+GKG+ G V R    R    TH      R    IG    P
Sbjct: 98  ELKVD-IFKEGQVVDVRGLTRGKGFAGTVKRHNF-RTQDATHGNSLSHRAPGSIGQCQTP 155

Query: 468 ARVSYTVARAGQNGYHHRTEMNKKVYKI 385
            RV      AGQ G  + T  ++++ K+
Sbjct: 156 GRVWKGKKMAGQLGNVYCTVQSQEIIKV 183

---

>RL3_HAEIN (P44344) 50S ribosomal protein L3|
          Length = 208

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WH 472
           +E+ +D +F   + +D+ G +KGKG++G V RW   R    TH        +G+      
Sbjct: 93  QEINVD-IFADVKKVDVTGTSKGKGFQGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQT 150

Query: 471 PARVSYTVARAGQNGYHHRTEMNKKVYKI 385
           P RV      AG  G    T  + +V ++
Sbjct: 151 PGRVFKGKKMAGHLGAERVTVQSLEVVRV 179

---

>RL3_ACTAC (P94799) 50S ribosomal protein L3 (Fragment)|
          Length = 121

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WH 472
           +E+ +D +F   + +D+ G +KGKG++G V RW   R    TH        +G+      
Sbjct: 6   QEINVD-IFADVKKVDVTGTSKGKGFQGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQT 63

Query: 471 PARVSYTVARAGQNGYHHRTEMNKKVYKI 385
           P RV      AG  G    T  + +V ++
Sbjct: 64  PGRVFKGKKMAGHLGNERVTVQSLEVVRV 92

---

>RL3_BRAPL (Q9FA04) 50S ribosomal protein L3|
          Length = 218

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA-CIGA-WHPA 466
           +E+ +D +FQ  + ID+  ++KG+G+ GV+ R      P       R+ A  IG   +PA
Sbjct: 94  QELKVD-IFQAGDFIDVSSLSKGRGFAGVMKRHNYDGGPMSHGSNFRRRAGSIGCNSYPA 152

Query: 465 RVSYTVARAGQNGYHHRTEMNKKVYKI 385
           RV       G  G    T  N KV +I
Sbjct: 153 RVWKGKGMPGHMGNTLTTIQNLKVVEI 179

---

>RL3_MYCLE (P30762) 50S ribosomal protein L3|
          Length = 217

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSY 454
           +F     +D+ G +KGKG+ G + R      G +   +  HR  R  +  G   PARV  
Sbjct: 105 IFADATYVDVTGTSKGKGFSGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPARVFK 162

Query: 453 TVARAGQNGYHHRTEMNKKVYKI 385
               AG+ G    T  N  V+K+
Sbjct: 163 GTRMAGRMGNDRVTVQNLLVHKV 185

---

>RL3_BUCAI (P57591) 50S ribosomal protein L3|
          Length = 209

 Score = 34.7 bits (78), Expect = 0.29
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRW 541
           +F   + +DI G++KGKG+ G V RW
Sbjct: 100 IFNNVKKVDITGISKGKGFSGTVKRW 125

---

>RL3_PSESM (Q889X1) 50S ribosomal protein L3|
          Length = 211

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRW 541
           +F   +++D+ G +KGKG++G + RW
Sbjct: 100 IFAAGQLVDVTGQSKGKGFQGTIKRW 125

---

>RL3_STAS1 (Q49ZG8) 50S ribosomal protein L3|
          Length = 219

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 523
           +EV ++  F+  ++ID+ GV+KGKG++G + R    R P
Sbjct: 103 QEVSVNT-FEAGDVIDVTGVSKGKGFQGAIKRHNQARGP 140

---

>RL3_CHLPN (Q9Z7Q7) 50S ribosomal protein L3|
          Length = 219

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 445
           VF+    +D+ G++KGKG++GV+ ++G    P     G  R    IG    P R      
Sbjct: 111 VFEDVSSVDVRGISKGKGFQGVMKKFGFRGGPGSHGSGFHRHAGSIGMRSTPGRCFPGSK 170

Query: 444 RAGQNGYHHRTEMNKKVYKI 385
           R    G  + T  N +V K+
Sbjct: 171 RPSHMGAENVTVKNLEVIKV 190

---

>RL3_BLOFL (Q7VQE8) 50S ribosomal protein L3|
          Length = 219

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
 Frame = -3

Query: 597 IDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTVARAGQNG 427
           +D+ G++KGKG+ G V RW            L  R    IG    P +V      AG  G
Sbjct: 108 VDVTGISKGKGFAGAVKRWNFRTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHLG 167

Query: 426 YHHRTEMNKKVYKI 385
           Y   T  N  V  I
Sbjct: 168 YEKATIQNLAVINI 181

---

>RL3_LACLA (Q9CDW2) 50S ribosomal protein L3|
          Length = 207

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 14/38 (36%), Positives = 25/38 (65%)
 Frame = -3

Query: 636 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 523
           E+ +D  F   +++D+ G +KGKG++G + R G +R P
Sbjct: 94  EITVDT-FAAGDVVDVTGTSKGKGFQGPIKRHGQSRGP 130

---

>RL3_PASMU (Q9CL32) 50S ribosomal protein L3|
          Length = 209

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WH 472
           +E+ +D +F   + +D+ G +KGKG+ G V RW   R    TH        +G+      
Sbjct: 94  QEINVD-IFADVKKVDVTGTSKGKGFAGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQT 151

Query: 471 PARVSYTVARAGQNGYHHRTEMNKKVYKI 385
           P RV      AG  G    T  + +V ++
Sbjct: 152 PGRVFKGKKMAGHLGNERVTVQSLEVVRV 180

---

>RL3_CHLMU (Q9PJL4) 50S ribosomal protein L3|
          Length = 221

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 445
           +F     +D+ G++KGKG++GV+ ++G    P+    G  R    IG    P R      
Sbjct: 111 IFDGVSNVDVCGISKGKGFQGVMKKFGFRGGPKSHGSGFHRHAGSIGMRSTPGRCFPGSK 170

Query: 444 RAGQNGYHHRTEMNKKVYKI 385
           R    G    T  N +V K+
Sbjct: 171 RPSHMGCDRVTVKNLEVVKV 190

---

>RL3_CHRVO (Q7NQF2) 50S ribosomal protein L3|
          Length = 214

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYTV 448
           +F   +++D+ G +KGKG+ GV+ R  +   R      R       IG A  P RV    
Sbjct: 103 IFTVGQLVDVTGTSKGKGFSGVIKRHNFSSNRASHGNSRSHNTPGSIGQAQDPGRVFPGK 162

Query: 447 ARAGQNG 427
             AGQ G
Sbjct: 163 RMAGQYG 169

---

>RL3_HAEDU (Q7VKD2) 50S ribosomal protein L3|
          Length = 208

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WH 472
           +E+ +D +F   + +D+ G +KGKG+ G V RW   R    TH        +G+      
Sbjct: 93  QEINVD-IFADVKKVDVTGTSKGKGFAGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQT 150

Query: 471 PARVSYTVARAGQNGYHHRTEMNKKVYKI 385
           P RV      AG  G    T  + +V ++
Sbjct: 151 PGRVFKGKKMAGHLGAERVTVQSLEVVRV 179

---

>RL3_WOLSU (Q7M8D4) 50S ribosomal protein L3|
          Length = 192

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = -3

Query: 579 TKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIG--AWHPARVSYTVARAGQNGYHHRTE 409
           TKG+G+ GV+ RW     P    HR  R+   IG   W P RV      AGQ G    T 
Sbjct: 100 TKGRGFTGVMKRWNFAGGPAAHGHRFKRRTGSIGNREW-PGRVQPGKKMAGQYGNEKVTV 158

Query: 408 MNKKV 394
            N+ V
Sbjct: 159 QNEIV 163

---

>RL3_CHLTR (O84533) 50S ribosomal protein L3|
          Length = 221

 Score = 33.5 bits (75), Expect = 0.64
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 490
           +F     +DI G++KGKG++GV+ ++G    P+    G  + A
Sbjct: 111 IFDGVSNVDICGISKGKGFQGVMKKFGFRGGPKSHGSGFHRHA 153

---

>RL3_STRAW (Q82DP5) 50S ribosomal protein L3|
          Length = 214

 Score = 33.1 bits (74), Expect = 0.83
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
 Frame = -3

Query: 615 FQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSYT 451
           F+    +D+ G +KGKG+ GV+ R      G     ++ HR    +   G   P RV   
Sbjct: 105 FEAGVKVDVTGKSKGKGFAGVMKRHNFKGLGAGHGTQRKHRSPGSIG--GCATPGRVFKG 162

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
           +  AG+ G    T  N  V+ +
Sbjct: 163 LRMAGRMGNERVTTQNLTVHAV 184

---

>RL3_XYLFA (Q9PE76) 50S ribosomal protein L3|
          Length = 215

 Score = 33.1 bits (74), Expect = 0.83
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
 Frame = -3

Query: 621 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSY 454
           ++F   + +DI G+TKGKG++G + R    R+   TH         G+      P RV  
Sbjct: 105 SIFAVGQKVDIQGITKGKGFQGTIKRHNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFP 163

Query: 453 TVARAGQNGYHHRTEMNKKVYKI 385
               +G  G   ++  N +V KI
Sbjct: 164 GKKMSGHMGAVRQSVQNLEVVKI 186

---

>RL3_RALSO (Q8XV12) 50S ribosomal protein L3|
          Length = 220

 Score = 33.1 bits (74), Expect = 0.83
 Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHPARVSYTV 448
           +F  D+ ID+ G T GKGY G + R+  +  R      R       IG A  P RV    
Sbjct: 103 LFSVDQKIDVQGTTIGKGYAGTIKRYHFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGK 162

Query: 447 ARAGQNGYHHRTEMNKKVYKI 385
              G  G   RT  N  + +I
Sbjct: 163 RMTGHMGDVTRTVQNLVIVRI 183

---

>FLGH_PSEPU (Q52081) Flagellar L-ring protein precursor (Basal body L-ring|
           protein)
          Length = 231

 Score = 33.1 bits (74), Expect = 0.83
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = +1

Query: 430 ILTSPSNSVG--HPSRMPGTNTGNLAKTSVGLAGKAGDTPTCHNTF----ITLTLGYTDD 591
           + +SPS S+     S+  G+     +KT +GL    G TP  +N F    ++L  GY+ D
Sbjct: 68  VTSSPSRSMSATSASKNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSGD 127

---

>RL3_MYCGE (P47397) 50S ribosomal protein L3|
          Length = 257

 Score = 33.1 bits (74), Expect = 0.83
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 541
           K++    +F+  E +D+  +TKG+G+ G + RW
Sbjct: 94  KKITPQELFKIGEYVDVTSLTKGRGFTGAIKRW 126

---

>RL3_XYLFT (Q87E82) 50S ribosomal protein L3|
          Length = 215

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
 Frame = -3

Query: 621 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSY 454
           ++F   + +DI G+TKGKG++G + R    R+   TH         G+      P RV  
Sbjct: 105 SIFAVGQKVDIQGITKGKGFQGTIKRHNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFP 163

Query: 453 TVARAGQNGYHHRTEMNKKVYKI 385
               +G  G   ++  N +V KI
Sbjct: 164 GKKMSGHMGAVKQSVQNLEVIKI 186

---

>RL3_CAUCR (Q9A8V3) 50S ribosomal protein L3|
          Length = 255

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
 Frame = -3

Query: 615 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR---GLRKVACIG-AWHPARVSYTV 448
           F   + +DI GVT GKG+ G + RW    L R TH      R     G    P R     
Sbjct: 107 FVAGQKVDIQGVTVGKGFAGAMKRWNFGGL-RATHGVSVSHRSHGSTGNRQDPGRTFPGK 165

Query: 447 ARAGQNGYHHRTEMNKKVYKI 385
             AG  G    T +N  V+K+
Sbjct: 166 KMAGHLGQETVTTLNVTVWKV 186

---

>RL3_YERPS (P11252) 50S ribosomal protein L3|
          Length = 209

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 541
           +E+ ++ +F   + +D+ G +KGKG+ G V RW
Sbjct: 94  QEISVE-IFADVKKVDVTGTSKGKGFAGTVKRW 125

---

>RL3_YERPE (Q8ZJA9) 50S ribosomal protein L3|
          Length = 209

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 541
           +E+ ++ +F   + +D+ G +KGKG+ G V RW
Sbjct: 94  QEISVE-IFADVKKVDVTGTSKGKGFAGTVKRW 125

---

>RL3_PSEPK (Q88QN5) 50S ribosomal protein L3|
          Length = 211

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRW 541
           +F   +++D+ G +KGKG+ G + RW
Sbjct: 100 LFTAGQLVDVTGQSKGKGFAGTIKRW 125

---

>FLGH_PSEPK (Q88ER9) Flagellar L-ring protein precursor (Basal body L-ring|
           protein)
          Length = 231

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +1

Query: 421 VVSILTSPSNSVGHPSRMPGTNTGNLAKTSVGLAGKAGDTPTCHNTF----ITLTLGYTD 588
           V  I+T   N     S+  G+     +KT +GL    G TP  +N F    ++L  GY+ 
Sbjct: 67  VGDIITITLNERTSASKNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSG 126

Query: 589 D 591
           D
Sbjct: 127 D 127

---

>RL3_MYCPN (P75580) 50S ribosomal protein L3|
          Length = 287

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRW 541
           +FQ  E +D+  ++KG+G+ G + RW
Sbjct: 101 LFQVGEYVDVSAISKGRGFTGAIKRW 126

---

>RL3_PHOLL (Q7MYF1) 50S ribosomal protein L3|
          Length = 209

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRW 541
           +F   + +D+ G +KGKG+ G V RW
Sbjct: 100 IFADVKKVDVTGTSKGKGFAGTVKRW 125

---

>RL3_STRCO (Q9L0E0) 50S ribosomal protein L3|
          Length = 214

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
 Frame = -3

Query: 639 KEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HP 469
           +E+  +A F+    +D+   +KGKG+ GV+ R      +     HR  R    IG    P
Sbjct: 98  QEITAEA-FESGVKVDVTAKSKGKGFAGVMKRHNFKGGKASHGAHRVHRMPGSIGGCATP 156

Query: 468 ARVSYTVARAGQNGYHHRTEMNKKVYKI 385
            RV   +  AG+ G    T  N  V+ +
Sbjct: 157 GRVFKGMRMAGRMGNERVTTQNLTVHAV 184

---

>RL3_ONYPE (P60455) 50S ribosomal protein L3|
          Length = 157

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 523
           +FQ  +++D+ G +KGKG+ G + R   +R P
Sbjct: 42  LFQVGDLVDVTGTSKGKGFAGSIKRHNQSRGP 73

---

>RL3_SHIFL (P60447) 50S ribosomal protein L3|
          Length = 209

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 451
           +F   + +D+ G +KGKG+ G V RW   R    TH      R    IG    P +V   
Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
              AGQ G    T  +  V ++
Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180

---

>RL3_SALTY (P60446) 50S ribosomal protein L3|
          Length = 209

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 451
           +F   + +D+ G +KGKG+ G V RW   R    TH      R    IG    P +V   
Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
              AGQ G    T  +  V ++
Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180

---

>RL3_SALTI (P60445) 50S ribosomal protein L3|
          Length = 209

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 451
           +F   + +D+ G +KGKG+ G V RW   R    TH      R    IG    P +V   
Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
              AGQ G    T  +  V ++
Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180

---

>RL3_ECOLI (P60438) 50S ribosomal protein L3|
          Length = 209

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 451
           +F   + +D+ G +KGKG+ G V RW   R    TH      R    IG    P +V   
Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
              AGQ G    T  +  V ++
Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180

---

>RL3_ECOL6 (P60439) 50S ribosomal protein L3|
          Length = 209

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 451
           +F   + +D+ G +KGKG+ G V RW   R    TH      R    IG    P +V   
Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
              AGQ G    T  +  V ++
Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180

---

>RL3_ECO57 (P60440) 50S ribosomal protein L3|
          Length = 209

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 451
           +F   + +D+ G +KGKG+ G V RW   R    TH      R    IG    P +V   
Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
              AGQ G    T  +  V ++
Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180

---

>RL3_SHEON (Q8EK68) 50S ribosomal protein L3|
          Length = 212

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
 Frame = -3

Query: 618 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 451
           +F     +D+ G +KGKG++G V RW   R    TH      R    IG    P RV   
Sbjct: 103 IFADVAKVDVTGQSKGKGFQGGVKRWNF-RTQDMTHGNSLSHRSNGSIGQNQTPGRVFKG 161

Query: 450 VARAGQNGYHHRTEMNKKVYKI 385
              +G  G    T  N  V ++
Sbjct: 162 KKMSGHMGAERVTTQNLDVVRV 183

---

>CY42_TRYBB (Q99396) Receptor-type adenylate cyclase GRESAG 4.2 (EC 4.6.1.1)|
           (ATP pyrophosphate-lyase) (Adenylyl cyclase) (Fragment)
          Length = 572

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
 Frame = -3

Query: 462 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQ-----ETHDASTEFDRTEKDITPMGGFPH 298
           + Y     G + Y        +   +G  GQ     ET+ + +  +R++ D+TP+GG P 
Sbjct: 401 IRYDEVTKGYDYYGQTANTAARTESVGNGGQVLMTCETYHSLSTAERSQFDVTPLGGVPL 460

Query: 297 YGV 289
            GV
Sbjct: 461 RGV 463

---

>RL3_BRAJA (Q89J84) 50S ribosomal protein L3|
          Length = 238

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = -3

Query: 633 VPIDAVFQKD-----EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 511
           +P+ A  Q D     + +D+ G + GKG+ G + RW    L R TH
Sbjct: 91  IPVGAEIQADHFVVGQFVDVTGTSVGKGFAGGMKRWNFGGL-RATH 135

---

>HOY1_YARLI (Q99160) Homeobox protein HOY1|
          Length = 509

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
 Frame = +1

Query: 424 VSILTSPSNSVGHPSRMPGTNTGNLAKTSVGLAGKAGDTPTCHNTFITLTLGYTDDVNHL 603
           V+ +T+PS  V + + +      NL  T +G       TP   + F    LG+  D+N L
Sbjct: 405 VAHVTNPSGHVTNHNHLSDP-AANLTSTILGNVTPGHTTPVLDDGF---ELGHVTDINDL 460

Query: 604 IFLENRINGDFLLKEVVTIVHLIGNGA-TID 693
           + +   +       E+ +  H+I N A T+D
Sbjct: 461 VSVAQLLPNHVTEAELASNCHMIANNAFTLD 491

---

>PHF12_MOUSE (Q5SPL2) PHD finger protein 12 (PHD factor 1) (Pf1)|
          Length = 1003

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 432 SDQPEQQCRTP*QDARHQYRQPCEDLCGSCGEGG 533
           +D+ E++ R P +++R   R    D C SC EGG
Sbjct: 33  TDEAEKRSRKPEKESRRSGRATNHDSCDSCKEGG 66

---

>RL3_PLARO (P72233) 50S ribosomal protein L3 (Fragment)|
          Length = 140

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -3

Query: 615 FQKDEMIDIIGVTKGKGYEGVVTRWG 538
           F+  + +D+ G +KGKG+ GV+ R G
Sbjct: 105 FEAGQFVDVTGKSKGKGFAGVMKRHG 130

---

>RL3_RHOPA (P60456) 50S ribosomal protein L3 (RRP-L3)|
          Length = 241

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = -3

Query: 633 VPIDAVFQKD-----EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 511
           +P+ A  Q D     + +D+ G + GKG+ G + RW    L R TH
Sbjct: 91  LPVGAEIQADHFVVGQFVDVTGTSTGKGFAGGMKRWNFGGL-RATH 135

---

>RL3_PROMM (Q7V542) 50S ribosomal protein L3|
          Length = 218

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
 Frame = -3

Query: 615 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGA-WHPARVSYTVAR 442
           F+  + +D+ G T G+G+ G   R G +R P     +  R+    GA   P R+      
Sbjct: 102 FEAGQKVDVSGDTMGRGFAGYQKRHGFSRGPMSHGSKNHREPGSTGAGTTPGRIYPGKRM 161

Query: 441 AGQNGYHHRTEMNKKVYKI 385
           AG+ G   RT     + K+
Sbjct: 162 AGRYGGKKRTTRGLTILKV 180

---

>PHF12_HUMAN (Q96QT6) PHD finger protein 12 (PHD factor 1) (Pf1)|
          Length = 1004

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 432 SDQPEQQCRTP*QDARHQYRQPCEDLCGSCGEGG 533
           +D+ E++ R P ++ R   R    D C SC EGG
Sbjct: 33  TDEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGG 66

---

>RL3_RHOBA (Q7UN20) 50S ribosomal protein L3|
          Length = 228

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 34/138 (24%), Positives = 49/138 (35%), Gaps = 5/138 (3%)
 Frame = -3

Query: 615 FQKDEMIDIIGVTKGKGYEGVVTRWG-----VTRLPRKTHRGLRKVACIGAWHPARVSYT 451
           F   + +DI G +KG+G+ GV+ R        T   +K HR         +  P+R    
Sbjct: 119 FNDVKKVDITGTSKGRGFAGVMKRHNFAGQRATHGVKKCHRHAGGTGMSAS--PSRTFKG 176

Query: 450 VARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 271
              AGQ G    T  N +V ++        DA                           L
Sbjct: 177 KRMAGQYGNAKVTTRNLEVVRV--------DAENNL-----------------------L 205

Query: 270 MIKGCCVGPKKRVVTLRQ 217
           MI+G   GP    V++RQ
Sbjct: 206 MIRGAVPGPNGGFVSIRQ 223

---

>RK3_ODOSI (P49569) Chloroplast 50S ribosomal protein L3|
          Length = 196

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
 Frame = -3

Query: 603 EMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYTVARAG 436
           + ID+ G + GKG+ G+  R   TR P     K HR    +       P RV      AG
Sbjct: 95  QFIDVTGKSSGKGFSGLQKRHNFTRGPMTHGSKNHRAPGSIGM--GTTPGRVLPGKKMAG 152

Query: 435 QNGYHHRTEMNKKVYKIGKVGQE 367
           Q G  ++    KK+  I   G E
Sbjct: 153 QLG--NKVTKTKKLKIIQVNGNE 173


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,247,653
Number of Sequences: 219361
Number of extensions: 2230241
Number of successful extensions: 6616
Number of sequences better than 10.0: 184
Number of HSP's better than 10.0 without gapping: 6307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6547
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6969622431
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

---