>dbj|AK108428.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-A09, full
           insert sequence
          Length = 1115

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                       
Query: 313 cttcaccagggggtcttgtcgcccggacctgcaaggatgatattgcaatcaatggcgaac 372
           |||||||| || ||||||||||| ||||| |||||||||||||||||||| |||||||| 
Sbjct: 737 cttcaccatggagtcttgtcgcctggaccggcaaggatgatattgcaatctatggcgaat 678

                                                           
Query: 373 cgccgcgccagcatgatggccgtgttccgctctctcgctgtttcgaag 420
           ||||| |  |||||||| || ||||| || |||||||  |||||||||
Sbjct: 677 cgccgggtgagcatgattgcggtgttgcgttctctcgtcgtttcgaag 630

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 313      cttcaccagggggtcttgtcgcccggacctgcaaggatgat 353
                |||||||| || ||||||||||| ||||| |||||||||||
Sbjct: 14051773 cttcaccatggagtcttgtcgcctggaccggcaaggatgat 14051813

>gb|AC137597.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0022F22, from chromosome 3, complete sequence
          Length = 144268

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 313   cttcaccagggggtcttgtcgcccggacctgcaaggatgat 353
             |||||||| || ||||||||||| ||||| |||||||||||
Sbjct: 61452 cttcaccatggagtcttgtcgcctggaccggcaaggatgat 61492

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 313      cttcaccagggggtcttgtcgcccggacctgcaaggatgat 353
                |||||||| || ||||||||||| ||||| |||||||||||
Sbjct: 14046748 cttcaccatggagtcttgtcgcctggaccggcaaggatgat 14046788

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 293     tccagcaccagtgcgccgcccttcaccagg 322
               |||||||||||| |||| ||||||||||||
Sbjct: 5180181 tccagcaccagttcgccacccttcaccagg 5180152

>ref|XM_798400.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053508063.9) partial mRNA
          Length = 4569

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 112  gcacgcgcagtcggagaacaacgccg 137
            ||||||||||||||||||| ||||||
Sbjct: 1099 gcacgcgcagtcggagaacgacgccg 1074

>ref|XM_802503.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053508399.49) partial mRNA
          Length = 6224

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 112  gcacgcgcagtcggagaacaacgccg 137
            ||||||||||||||||||| ||||||
Sbjct: 1233 gcacgcgcagtcggagaacgacgccg 1208

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 293     tccagcaccagtgcgccgcccttcaccagg 322
               |||||||||||| |||||||||| ||||||
Sbjct: 4667606 tccagcaccagttcgccgcccttgaccagg 4667577

>emb|CR385071.9| Zebrafish DNA sequence from clone CH211-245B7 in linkage group 24,
             complete sequence
          Length = 160655

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 229   gaaattacactaaaatgtacaa 250
             ||||||||||||||||||||||
Sbjct: 59086 gaaattacactaaaatgtacaa 59065

>ref|XM_483672.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 384

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 118 gcagtcggagaacaacgccgaggcg 142
           |||||||| ||||||||||||||||
Sbjct: 165 gcagtcggtgaacaacgccgaggcg 189

>gb|AC123066.4| Mus musculus BAC clone RP23-262I13 from chromosome 19, complete
             sequence
          Length = 206333

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 196   ggggaacaaaacccacaggct 216
             |||||||||||||||||||||
Sbjct: 22119 ggggaacaaaacccacaggct 22139

>gb|AC132389.3| Mus musculus BAC clone RP23-448A4 from chromosome 19, complete sequence
          Length = 165998

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 196   ggggaacaaaacccacaggct 216
             |||||||||||||||||||||
Sbjct: 21779 ggggaacaaaacccacaggct 21759

>emb|AL845317.7| Mouse DNA sequence from clone RP23-222K9 on chromosome 4 Contains a
             ribosomal protein L7 (Rpl7) pseudogene, the gene for a
             novel protein similar to stathmin 1 Stmn1 and a eukaryotic
             translation initiation factor 3 subunit 8 (Eif3s8)
             pseudogene, complete sequence
          Length = 181889

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 195   aggggaacaaaacccacaggc 215
             |||||||||||||||||||||
Sbjct: 42014 aggggaacaaaacccacaggc 41994

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 118      gcagtcggagaacaacgccgaggcg 142
                |||||||| ||||||||||||||||
Sbjct: 27576097 gcagtcggtgaacaacgccgaggcg 27576121

>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1479_B11
          Length = 105702

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 118   gcagtcggagaacaacgccgaggcg 142
             |||||||| ||||||||||||||||
Sbjct: 58387 gcagtcggtgaacaacgccgaggcg 58411

>dbj|AK109949.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-A03, full
            insert sequence
          Length = 3339

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 292  atccagcaccagtgcgccgcc 312
            |||||||||||||||||||||
Sbjct: 2843 atccagcaccagtgcgccgcc 2863

>ref|XM_479311.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2058

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 337  ggacctgcaaggatgatattgcaatcaatggc 368
            ||||| ||||| |||||||||||||| |||||
Sbjct: 1705 ggaccagcaagtatgatattgcaatcgatggc 1674

>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 295     cagcaccagtgcgccgcccttcaccagggggt 326
               ||||||| | ||||||||||||||||| ||||
Sbjct: 3187427 cagcacccgcgcgccgcccttcaccagcgggt 3187458

>gb|BT013194.1| Lycopersicon esculentum clone 134346R, mRNA sequence
          Length = 1161

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 40  gtcgcatggtatcaaaaaca 59
           ||||||||||||||||||||
Sbjct: 573 gtcgcatggtatcaaaaaca 554

>gb|AC126441.5| Mus musculus BAC clone RP23-431D8 from chromosome 7, complete sequence
          Length = 220308

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   caccacaaggccacagggga 200
             ||||||||||||||||||||
Sbjct: 68085 caccacaaggccacagggga 68066

>gb|AC124457.4| Mus musculus BAC clone RP24-134O20 from chromosome 7, complete sequence
          Length = 166862

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    caccacaaggccacagggga 200
              ||||||||||||||||||||
Sbjct: 138593 caccacaaggccacagggga 138574

>ref|XM_799167.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
           (DGF-1) (Tc00.1047053507201.9) partial mRNA
          Length = 5503

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 112 gcacgcgcagtcggagaacaacgc 135
           ||||||||||||||||||| ||||
Sbjct: 117 gcacgcgcagtcggagaacgacgc 94

>ref|XM_799312.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053507203.9) partial mRNA
          Length = 1706

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 112  gcacgcgcagtcggagaacaacgc 135
            ||||||||||||||||||| ||||
Sbjct: 1296 gcacgcgcagtcggagaacgacgc 1273

>emb|AL450490.6| Human DNA sequence from clone RP11-124N4 on chromosome X Contains the
            5' end of the DCX gene for doublecortex; lissencephaly
            X-linked (doublecortin), complete sequence
          Length = 49532

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 225  tcatgaaattacactaaaat 244
            ||||||||||||||||||||
Sbjct: 5217 tcatgaaattacactaaaat 5236

>emb|BX248585.1| Blochmannia floridanus complete genome; segment 2/3
          Length = 267050

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    tacaacatatcatgaaatta 235
              ||||||||||||||||||||
Sbjct: 146112 tacaacatatcatgaaatta 146131

>emb|AJ308540.1|LES308540 Lycopersicon esculentum mRNA for Clp protease 2 proteolytic subunit
           (clpP2 gene)
          Length = 1172

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 40  gtcgcatggtatcaaaaaca 59
           ||||||||||||||||||||
Sbjct: 582 gtcgcatggtatcaaaaaca 563

>emb|AJ307670.1|MMU307670 Mus musculus St5 gene, L27a gene and Kiaa0298 gene
          Length = 202748

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    caccacaaggccacagggga 200
              ||||||||||||||||||||
Sbjct: 117280 caccacaaggccacagggga 117299

>dbj|AK073689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033059M22, full
            insert sequence
          Length = 2059

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 337  ggacctgcaaggatgatattgcaatcaatggc 368
            ||||| ||||| |||||||||||||| |||||
Sbjct: 1705 ggaccagcaagtatgatattgcaatcgatggc 1674

>gb|AC117789.17| Mus musculus chromosome 1, clone RP24-548D18, complete sequence
          Length = 180733

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   ccagcatgatggccgtgttc 399
             ||||||||||||||||||||
Sbjct: 44132 ccagcatgatggccgtgttc 44113


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,896,145
Number of Sequences: 3902068
Number of extensions: 2896145
Number of successful extensions: 52133
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51975
Number of HSP's gapped (non-prelim): 158
length of query: 420
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 398
effective length of database: 17,147,199,772
effective search space: 6824585509256
effective search space used: 6824585509256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)