ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags6i22 |
|---|---|
| Clone Library Name | barley_pub |
>RIR1_ARATH (Q9SJ20) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase R1 subunit) (AtRNR1) Length = 816 Score = 213 bits (542), Expect = 4e-55 Identities = 105/144 (72%), Positives = 122/144 (84%), Gaps = 5/144 (3%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 LKN +I ++GS+ + EIPDDLKAIY+TVWEIKQ+TVVDMA DRGCYIDQSQSLNIHMD+ Sbjct: 674 LKNKLINENGSIVNVAEIPDDLKAIYRTVWEIKQRTVVDMAADRGCYIDQSQSLNIHMDK 733 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLKDKKPANAE-----EEE 276 N KLTSLHF+TW KGLKTGMYYLR+RAAADAIKFTVDT++LK+ KP+ AE EEE Sbjct: 734 PNFAKLTSLHFYTWKKGLKTGMYYLRSRAAADAIKFTVDTAMLKE-KPSVAEGDKEVEEE 792 Query: 275 DLEAKMAQVTCSLNNREDCLACGS 204 D E K+AQ+ CSL N E+CLACGS Sbjct: 793 DNETKLAQMVCSLTNPEECLACGS 816
>RIR1_MOUSE (P07742) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase M1 subunit) (Ribonucleotide reductase large chain) Length = 792 Score = 179 bits (453), Expect = 8e-45 Identities = 87/139 (62%), Positives = 108/139 (77%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 +KN II +GS+Q I EIPDDLK +YKTVWEI QKTV+ MA +RG +IDQSQSLNIH+ + Sbjct: 655 MKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAE 714 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLKDKKPANAEEEEDLEAK 261 N GKLTS+HF+ W +GLKTGMYYLRTR AA+ I+FT++ LKDK+ A +EEE+ E Sbjct: 715 PNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKEKA-LKEEEEKERN 773 Query: 260 MAQVTCSLNNREDCLACGS 204 A + CSL NRE+CL CGS Sbjct: 774 TAAMVCSLENREECLMCGS 792
>RIR1_HUMAN (P23921) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase M1 subunit) (Ribonucleotide reductase large chain) Length = 792 Score = 177 bits (450), Expect = 2e-44 Identities = 86/139 (61%), Positives = 107/139 (76%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 +KN II +GS+Q I EIPDDLK +YKTVWEI QKTV+ MA +RG +IDQSQSLNIH+ + Sbjct: 655 MKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAE 714 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLKDKKPANAEEEEDLEAK 261 N GKLTS+HF+ W +GLKTGMYYLRTR AA+ I+FT++ LKDK+ + EEEE E Sbjct: 715 PNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKEKVSKEEEEK-ERN 773 Query: 260 MAQVTCSLNNREDCLACGS 204 A + CSL NR++CL CGS Sbjct: 774 TAAMVCSLENRDECLMCGS 792
>RIR1_BRARE (P79732) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase M1 subunit) (Ribonucleotide reductase large chain) (Ribonucleotide reductase protein R1 class I) Length = 794 Score = 172 bits (437), Expect = 6e-43 Identities = 82/140 (58%), Positives = 105/140 (75%), Gaps = 1/140 (0%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 +KN II +GS+Q I IPDDLK +YKTVWEI QKT++ MA DRG YIDQSQSLNIH+ + Sbjct: 655 MKNQIIAQNGSIQTIPAIPDDLKELYKTVWEISQKTILKMAADRGAYIDQSQSLNIHIAE 714 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLKD-KKPANAEEEEDLEA 264 N GKLTS+HF+ W +GLKTGMYYLRT+ A+ I+FT++ LK+ +K ++E+EE E Sbjct: 715 PNYGKLTSMHFYGWKQGLKTGMYYLRTKPGANPIQFTLNKEKLKETQKTTSSEDEETKER 774 Query: 263 KMAQVTCSLNNREDCLACGS 204 A + CSL NR +CL CGS Sbjct: 775 NKAAMVCSLENRHECLMCGS 794
>RIR1_PLAF4 (P50648) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase R1 subunit) Length = 806 Score = 154 bits (389), Expect = 2e-37 Identities = 81/150 (54%), Positives = 102/150 (68%), Gaps = 13/150 (8%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 +K +I +GS+Q I+EIPDDLK +YKTVWEIKQK ++DMA DRG +IDQSQSLNI++ + Sbjct: 655 MKQQLIAHNGSIQYISEIPDDLKELYKTVWEIKQKNIIDMAADRGIFIDQSQSLNIYIQK 714 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLKDK-KPANAE------- 285 KL+S+HF+ W KGLKTG YYLRT+AA DAIKFTVDT + K+ K NA+ Sbjct: 715 PTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTHVAKNAVKLKNADGVQITRE 774 Query: 284 ---EEEDLEAKMAQVTCSL--NNREDCLAC 210 E E+ + Q C L NN E CL C Sbjct: 775 VSRETISTESTVTQNVCPLRRNNDEQCLMC 804
>RIR1_DROME (P48591) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase M1 subunit) (Ribonucleotide reductase large chain) Length = 812 Score = 152 bits (384), Expect = 8e-37 Identities = 76/147 (51%), Positives = 102/147 (69%), Gaps = 8/147 (5%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 +KN II GS+Q I IP ++ +YKTVWEI K+ + MA DRG +IDQSQS NIH+ + Sbjct: 666 MKNQIISSRGSIQNIETIPPKVRDLYKTVWEISVKSTIKMAADRGAFIDQSQSFNIHVAE 725 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDT---SLLKDKKPANAE----- 285 N GKLTS+HF++W GLKTGMYYLRT+ AA+AI+FTV+ ++ + + AE Sbjct: 726 PNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVNKKQGAVSMNGQNGTAEGSPQK 785 Query: 284 EEEDLEAKMAQVTCSLNNREDCLACGS 204 EED E KMA + CSL N++ C++CGS Sbjct: 786 YEEDRERKMADMVCSLENKDACMSCGS 812
>RIR1_SCHPO (P36602) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 811 Score = 150 bits (380), Expect = 2e-36 Identities = 78/158 (49%), Positives = 101/158 (63%), Gaps = 19/158 (12%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 +KN ++ DGS+Q I EIP DLK +YKTVWEI QKTV+D A DRG +IDQSQSLNIH+ Sbjct: 654 MKNKLVMLDGSIQAIPEIPQDLKDLYKTVWEISQKTVIDYAADRGPFIDQSQSLNIHLKD 713 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLK---------DKKPANA 288 + GK+TS+HF+ W KGLKTGMYYLRT AA+ AIKFTVD L+ +KKP Sbjct: 714 PSYGKITSMHFYGWKKGLKTGMYYLRTMAASAAIKFTVDPVALRARNEESNEENKKPVIK 773 Query: 287 EEEEDLEAKMAQ----------VTCSLNNREDCLACGS 204 + ++ A+ + + CS+ N E C C + Sbjct: 774 NGKAEISAEPTKEEIDIYNEKVLACSIKNPEACEMCSA 811
>RIR1_PLAFG (P50647) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase R1 subunit) Length = 804 Score = 150 bits (380), Expect = 2e-36 Identities = 75/149 (50%), Positives = 99/149 (66%), Gaps = 12/149 (8%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 +K +I +GS+Q I+EIPDDLK +YKTVWEIKQK ++DMA DRG +IDQSQSLNI++ + Sbjct: 654 MKQQLIAHNGSIQYISEIPDDLKELYKTVWEIKQKNIIDMAADRGYFIDQSQSLNIYIQK 713 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLKDKKPANAEEEEDLEAK 261 KL+S+HF+ W KGLKTG YYLRT+AA DAIKFTVDT + K+ + + + Sbjct: 714 PTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTHVAKNAVKLKNADGVQITRE 773 Query: 260 MAQVTCSLNNR------------EDCLAC 210 +++ T LN R E CL C Sbjct: 774 VSRETIQLNQRYSKCVSFKSNNDEQCLMC 802
>RIR1_CRYPV (O61065) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase R1 subunit) Length = 803 Score = 150 bits (379), Expect = 3e-36 Identities = 76/151 (50%), Positives = 103/151 (68%), Gaps = 14/151 (9%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 LK NII ++GS+Q I IP+D++ +YKTVWEIKQKTV+DMA DRG Y+ QSQSLNIHM+ Sbjct: 655 LKQNIIANNGSIQNILTIPEDIRELYKTVWEIKQKTVIDMAADRGPYVCQSQSLNIHMEN 714 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLKDKKPANAEEEEDLEAK 261 AN KL+S+HF+ W KGLKTG+YYLRT++A I+FTVD LLK + +E++ LE Sbjct: 715 ANFAKLSSMHFYGWKKGLKTGIYYLRTQSATRPIQFTVDQQLLK----SETKEKDSLETN 770 Query: 260 MAQ---------VTC-----SLNNREDCLAC 210 Q + C ++ + E+C+ C Sbjct: 771 KRQALEPEAQKLIACPLRPTNMKDDEECMMC 801
>RIR1_NEUCR (Q9UW15) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase large subunit) Length = 929 Score = 142 bits (358), Expect = 8e-34 Identities = 66/104 (63%), Positives = 81/104 (77%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 +KN II + GS+Q I IP+D+KA+YKTVWEI Q+T+V MA DRG +IDQSQSLNIHM + Sbjct: 656 MKNRIIAEGGSIQNIQSIPNDIKALYKTVWEISQRTIVKMAADRGAFIDQSQSLNIHMRE 715 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLK 309 GK+TS+HF W GLKTGMYYLRT+AAA I+FTVD L+ Sbjct: 716 PTMGKITSMHFAGWKMGLKTGMYYLRTQAAAQPIQFTVDQEALR 759
>RIR1_CAEEL (Q03604) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleotide reductase large chain) Length = 788 Score = 140 bits (354), Expect = 2e-33 Identities = 65/120 (54%), Positives = 88/120 (73%), Gaps = 4/120 (3%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 +KN +I ++GS+Q I IP D+K +Y+TVWEI QK +++MA DRG YIDQSQSLNIHM + Sbjct: 661 MKNRLIANNGSIQNIDGIPSDIKELYRTVWEISQKDIIEMAADRGAYIDQSQSLNIHMAK 720 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLKDKK----PANAEEEED 273 + +TS+HF+ W KGLKTGMYYLRT+ A +A++FTVD + LK + PA E +D Sbjct: 721 PSYAGITSMHFYGWKKGLKTGMYYLRTKPAVNAVQFTVDKNALKTNQQAETPATVAESQD 780
>RIR1_TRYBB (O15909) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase R1 subunit) Length = 838 Score = 133 bits (335), Expect = 4e-31 Identities = 61/123 (49%), Positives = 89/123 (72%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 ++ II +GSV I EIP+ ++ +YK VWEI+QK ++DMA DRG YIDQSQSLN+ + Sbjct: 677 MRRKIIALNGSVSGIKEIPERIRELYKVVWEIRQKDLIDMAADRGRYIDQSQSLNLFLAT 736 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLKDKKPANAEEEEDLEAK 261 S +LTS+HF++W KGLKTGMYYLR++ AADAIKFT+D +K+ + + +E++ Sbjct: 737 PTSSQLTSMHFYSWKKGLKTGMYYLRSQPAADAIKFTLDPKAMKELPKPDKQSKEEVHGS 796 Query: 260 MAQ 252 + + Sbjct: 797 VGR 799
>RIR1_VARV (P32984) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 771 Score = 130 bits (328), Expect = 2e-30 Identities = 59/104 (56%), Positives = 80/104 (76%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 +KN I+ D GS+Q T +P+D+K +YKT+WEI QKT++ MA DRG +IDQSQS+NIH+ Sbjct: 654 IKNRIMVDGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAFIDQSQSMNIHIAD 712 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLK 309 + KLTS+HF+ WS GLKTGMYYLRT+ A+ I+FT+D +K Sbjct: 713 PSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK 756
>RIR1_VACCV (P12848) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 771 Score = 130 bits (328), Expect = 2e-30 Identities = 60/112 (53%), Positives = 83/112 (74%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 +KN I+ D GS+Q T +P+D+K +YKT+WEI QKT++ MA DRG +IDQSQS+NIH+ Sbjct: 654 IKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAFIDQSQSMNIHIAD 712 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLKDKKPANAE 285 + KLTS+HF+ WS GLKTGMYYLRT+ A+ I+FT+D +K ++E Sbjct: 713 PSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIKPPVVCDSE 764
>RIR1_VACCC (P20503) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 771 Score = 130 bits (327), Expect = 3e-30 Identities = 59/104 (56%), Positives = 80/104 (76%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 +KN I+ D GS+Q T +P+D+K +YKT+WEI QKT++ MA DRG +IDQSQS+NIH+ Sbjct: 654 IKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAFIDQSQSMNIHIAD 712 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLK 309 + KLTS+HF+ WS GLKTGMYYLRT+ A+ I+FT+D +K Sbjct: 713 PSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK 756
>RIR1_VACCA (Q76RD8) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 771 Score = 130 bits (327), Expect = 3e-30 Identities = 59/104 (56%), Positives = 80/104 (76%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 +KN I+ D GS+Q T +P+D+K +YKT+WEI QKT++ MA DRG +IDQSQS+NIH+ Sbjct: 654 IKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAFIDQSQSMNIHIAD 712 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLK 309 + KLTS+HF+ WS GLKTGMYYLRT+ A+ I+FT+D +K Sbjct: 713 PSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK 756
>RIR3_YEAST (P21672) Ribonucleoside-diphosphate reductase large chain 2 (EC| 1.17.4.1) (Ribonucleotide reductase large subunit 2) (Ribonucleotide reductase DNA damage-inducible regulatory subunit 2) (Ribonucleotide reductase R1 subunit 2) Length = 869 Score = 128 bits (322), Expect = 1e-29 Identities = 56/99 (56%), Positives = 77/99 (77%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 +K +I +GS+Q + +P +LK +YKTVWEI QKT+++MA DR YIDQS SLN+ + Sbjct: 659 MKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIYIDQSHSLNLFLQA 718 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVD 324 + GK+TS+HF+ W KGLKTGMYYLRT+AA+ AI+FT+D Sbjct: 719 PSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTID 757
>RIR1_YEAST (P21524) Ribonucleoside-diphosphate reductase large chain 1 (EC| 1.17.4.1) (Ribonucleotide reductase large subunit 1) (Ribonucleotide reductase R1 subunit 1) Length = 888 Score = 128 bits (322), Expect = 1e-29 Identities = 60/118 (50%), Positives = 84/118 (71%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 +K +I +GS+Q + +P +LK +YKTVWEI QKT+++MA DR YIDQS SLN+ + Sbjct: 659 MKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVYIDQSHSLNLFLRA 718 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLKDKKPANAEEEEDLE 267 GKLTS+HF+ W KGLKTGMYYLRT+AA+ AI+FT+D + D+ N + +L+ Sbjct: 719 PTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQK-IADQATENVADISNLK 775
>RIR1_ENCCU (Q8SR37) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 768 Score = 122 bits (306), Expect = 9e-28 Identities = 57/102 (55%), Positives = 76/102 (74%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 +KN +I ++GS+Q IT IP +++ IYKT WEIK K+V+D+A DR ++DQSQSLNI + + Sbjct: 647 MKNLVIENEGSIQNITSIPHEIREIYKTAWEIKMKSVIDLAADRQVFVDQSQSLNIFIAK 706 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSL 315 +LTS+HF+ + GLKTGMYYLRTR AIKFTVD L Sbjct: 707 PTYSQLTSMHFYGYHCGLKTGMYYLRTRPITSAIKFTVDKKL 748
>RIR1_MIMIV (Q7T6Y8) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 881 Score = 120 bits (300), Expect = 4e-27 Identities = 54/133 (40%), Positives = 90/133 (67%) Frame = -1 Query: 608 IIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQANSG 429 I Y GSV I IPD++KAIY+TVWEI QK++++MA DR ++DQ+QS+N+++D+ + Sbjct: 731 IKYYKGSVANIPNIPDNIKAIYRTVWEIPQKSIIEMAADRAPFVDQTQSMNLYIDKPSFA 790 Query: 428 KLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLKDKKPANAEEEEDLEAKMAQV 249 +L S F+ W KGLKTGMYYLR++ A+ A +F +D +K+ + N ++++ + + Sbjct: 791 RLNSCLFYAWRKGLKTGMYYLRSKPASSANQFGIDIDKIKEIESKNGIKKQEDTFDLTDL 850 Query: 248 TCSLNNREDCLAC 210 T ++N + + C Sbjct: 851 TNTINQQVSGMVC 863
>RIR1_CHLTR (O84834) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 1047 Score = 76.6 bits (187), Expect = 5e-14 Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 7/142 (4%) Frame = -1 Query: 614 NNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQAN 435 +++ Y DGS+ +I IPD LK I+ T +EI+ + +++ A R +ID QSLN+++ Q + Sbjct: 911 DDLKYFDGSLLEIERIPDHLKHIFLTAFEIEPEWIIECASRRQKWIDMGQSLNLYLAQPD 970 Query: 434 SGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTS-------LLKDKKPANAEEEE 276 KL++++ W KGLKT YYLR+ +A K VD + +K+K + E Sbjct: 971 GKKLSNMYLTAWKKGLKT-TYYLRSSSATTVEKSFVDINKRGIQPRWMKNKSASAGIIVE 1029 Query: 275 DLEAKMAQVTCSLNNREDCLAC 210 AK A V CSL E C AC Sbjct: 1030 --RAKKAPV-CSL--EEGCEAC 1046
>RIR1_CHLMU (Q9PL93) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 1047 Score = 73.9 bits (180), Expect = 3e-13 Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 2/137 (1%) Frame = -1 Query: 614 NNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQAN 435 +++ Y DGS+ +I +PD +K I+ T +EI+ + +++ A R +ID QSLN+++ Q + Sbjct: 911 DDLKYFDGSLLEIERVPDHIKHIFLTAFEIEPEWILECASRRQKWIDMGQSLNLYLAQPD 970 Query: 434 SGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSL--LKDKKPANAEEEEDLEAK 261 KL++++ W KGLKT YYLR+ +A K VD + ++ + N + + Sbjct: 971 GKKLSNMYLTAWKKGLKT-TYYLRSSSATTVEKSFVDINKRGIQPRWMKNKSASAGIVVE 1029 Query: 260 MAQVTCSLNNREDCLAC 210 A T + E C C Sbjct: 1030 RASKTPVCSLEEGCEVC 1046
>RIR1_CHLPN (Q9Z6S5) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 1044 Score = 68.9 bits (167), Expect = 1e-11 Identities = 34/97 (35%), Positives = 61/97 (62%) Frame = -1 Query: 614 NNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQAN 435 +++ Y DGS+ +I IP+ LK ++ T +EI+ + +++ R +ID SLN+++ + + Sbjct: 909 DDLKYFDGSLLEIERIPNHLKKLFLTAFEIEPEWIIECTSRRQKWIDMGVSLNLYLAEPD 968 Query: 434 SGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVD 324 KL++++ W KGLKT YYLR++AA K +D Sbjct: 969 GKKLSNMYLTAWKKGLKT-TYYLRSQAATSVEKSFID 1004
>RIR1_EHV1B (P28846) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 790 Score = 62.4 bits (150), Expect = 1e-09 Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 5/72 (6%) Frame = -1 Query: 545 YKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQANSGKL-----TSLHFHTWSKGLKT 381 +KT +E Q+T++DM DR ++DQSQS+++ + + GKL SL H + +GLKT Sbjct: 703 FKTAFEYDQRTLIDMCADRAPFVDQSQSMSLFITEPADGKLPASKIMSLLVHAYKRGLKT 762 Query: 380 GMYYLRTRAAAD 345 GMYY + + A + Sbjct: 763 GMYYCKIKKATN 774
>RIR1_HHV11 (P08543) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) (136 kDa subunit) Length = 1137 Score = 59.3 bits (142), Expect = 9e-09 Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Frame = -1 Query: 545 YKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQANSGKLTS-----LHFHTWSKGLKT 381 +KT ++ QK ++D+ DR Y+D SQS+ +++ + G L + L H + +GLKT Sbjct: 1049 FKTAFDYDQKLLIDLCADRAPYVDHSQSMTLYVTEKADGTLPASTLVRLLVHAYKRGLKT 1108 Query: 380 GMYYLRTRAAADAIKFTVDTSLL 312 GMYY + R A ++ F D +++ Sbjct: 1109 GMYYCKVRKATNSGVFGGDDNIV 1131
>RIR1_HHV23 (P09853) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) (136 kDa subunit) Length = 1144 Score = 58.5 bits (140), Expect = 2e-08 Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Frame = -1 Query: 545 YKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQANSGKLTS-----LHFHTWSKGLKT 381 +KT ++ Q+ ++D+ DR Y+D SQS+ +++ + G L + L H + +GLKT Sbjct: 1056 FKTAFDYDQELLIDLCADRAPYVDHSQSMTLYVTEKADGTLPASTLVRLLVHAYKRGLKT 1115 Query: 380 GMYYLRTRAAADAIKFTVDTSLL 312 GMYY + R A ++ F D +++ Sbjct: 1116 GMYYCKVRKATNSGVFAGDDNIV 1138
>RIR1_VZVD (P09248) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 775 Score = 57.8 bits (138), Expect = 3e-08 Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 5/73 (6%) Frame = -1 Query: 545 YKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQANSG-----KLTSLHFHTWSKGLKT 381 YKT +E +Q+ +VDM +R +IDQSQS+ + +++ G K+ +L + GLKT Sbjct: 688 YKTAFEYEQEDLVDMCAERAPFIDQSQSMTLFIEERPDGTIPASKIMNLLIRAYKAGLKT 747 Query: 380 GMYYLRTRAAADA 342 GMYY + R A ++ Sbjct: 748 GMYYCKIRKATNS 760
>RIR1_ASFM2 (P26685) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 779 Score = 57.4 bits (137), Expect = 3e-08 Identities = 34/114 (29%), Positives = 56/114 (49%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 ++ ++ GS+Q I +IP +++ YKT E+ QK + A R ++ QS SLN + + Sbjct: 666 IQQQLLNAGGSIQHILDIPAEIRERYKTSREMNQKILTKHAAARNPFVSQSMSLNYYFYE 725 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLKDKKPANAEEE 279 ++ ++ W KGL TG YY A K + S +K NA+ E Sbjct: 726 PELSQVLTVLVLGWKKGLTTGSYYCHFSPGAGTQKKIIRNS----EKACNADCE 775
>RIR1_EHV4 (P50642) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 789 Score = 57.0 bits (136), Expect = 4e-08 Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 5/72 (6%) Frame = -1 Query: 545 YKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQANSGKL-----TSLHFHTWSKGLKT 381 +KT +E Q +++M DR ++DQSQS+++ + + GKL +L H + +GLKT Sbjct: 702 FKTAFEYDQTMLINMCADRAAFVDQSQSMSLFITEPADGKLPASRIMNLLVHAYKRGLKT 761 Query: 380 GMYYLRTRAAAD 345 GMYY + + A + Sbjct: 762 GMYYCKIKKATN 773
>RIR1_BHV1C (P50646) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 787 Score = 57.0 bits (136), Expect = 4e-08 Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 5/79 (6%) Frame = -1 Query: 551 AIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQANSGK-----LTSLHFHTWSKGL 387 A +KT +E Q+ ++D+ DR ++DQSQS+++ + + GK + +L + + KGL Sbjct: 698 AKFKTAFEYDQERLIDLCADRAPFVDQSQSMSLFVTEPMDGKVPASQIMNLLVYAYKKGL 757 Query: 386 KTGMYYLRTRAAADAIKFT 330 KTG+YY + R A + FT Sbjct: 758 KTGLYYCKIRKATNNGVFT 776
>RIR1_ASFB7 (P42491) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 778 Score = 57.0 bits (136), Expect = 4e-08 Identities = 34/114 (29%), Positives = 56/114 (49%) Frame = -1 Query: 620 LKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQ 441 ++ ++ GS+Q I +IP +++ YKT E+ QK + A R ++ QS SLN + + Sbjct: 665 IQQQLLNAGGSIQHILDIPAEIRDRYKTSREMNQKILTKHAAARNPFVSQSMSLNYYFYE 724 Query: 440 ANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLKDKKPANAEEE 279 ++ ++ W KGL TG YY A K + S +K NA+ E Sbjct: 725 PELSQVLTVLVLGWKKGLTTGSYYCHFSPGAGTQKKIIRNS----EKACNADCE 774
>RIR1_PRVKA (P50643) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 835 Score = 55.5 bits (132), Expect = 1e-07 Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 5/79 (6%) Frame = -1 Query: 551 AIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQANSGKL-----TSLHFHTWSKGL 387 A +KT +E Q+ ++DM DR ++D SQS+++ + + GKL L ++ GL Sbjct: 746 AKFKTAFEYDQELLIDMCADRAPFVDHSQSMSLFLTEPADGKLHASRVMGLLMRAYNLGL 805 Query: 386 KTGMYYLRTRAAADAIKFT 330 KTGMYY + R A + FT Sbjct: 806 KTGMYYCKIRKATNNGVFT 824
>RIR1_AQUAE (O66503) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 801 Score = 50.1 bits (118), Expect = 5e-06 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 2/69 (2%) Frame = -1 Query: 545 YKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQAN--SGKLTSLHFHTWSKGLKTGMY 372 YKT + I + + A R +IDQ+QSLN+ +D N +L+ L+ W GLKT +Y Sbjct: 725 YKTAYTIDHEWTIRAAAVRQKWIDQAQSLNLFVDPQNIDGPRLSRLYELAWELGLKT-IY 783 Query: 371 YLRTRAAAD 345 YLR+R+A D Sbjct: 784 YLRSRSAMD 792
>RIR1_EBV (P03190) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) (140 kDa subunit) Length = 826 Score = 49.7 bits (117), Expect = 7e-06 Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 6/85 (7%) Frame = -1 Query: 581 KITEIPDDLKAIY---KTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHM---DQANSGKLT 420 +++ +P+ L+ Y +T ++ Q+ ++ M+ DR ++DQSQS ++ + D A + L Sbjct: 650 RVSCLPEALRQRYLRFQTAFDYNQEDLIQMSRDRAPFVDQSQSHSLFLREEDAARASTLA 709 Query: 419 SLHFHTWSKGLKTGMYYLRTRAAAD 345 +L ++ GLKT MYY R AAD Sbjct: 710 NLLVRSYELGLKTIMYYCRIEKAAD 734
>RIR1_SHV21 (Q01037) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 767 Score = 43.5 bits (101), Expect = 5e-04 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 10/133 (7%) Frame = -1 Query: 578 ITEIPDDLKAIYK---TVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQAN--SGK-LTS 417 ++ +P+D+ YK T ++ + + A R Y+DQSQSL + + + N S K L Sbjct: 635 VSMMPEDVSTRYKHFLTAFDYCPEAQMRRASIRAPYVDQSQSLTLFLTEENVQSAKYLKD 694 Query: 416 LHFHTWSKGLKTGMYYLRTRAAADAIK---FTVDTSLLKDKKPANAEEEEDL-EAKMAQV 249 L + GLKT MYY R + ++ +D KD + A+ +L ++ + Sbjct: 695 LLLLGFRLGLKTIMYYCRVKKTTKLLQLECLKLDEHTKKDAQIVLADLARELPDSHKTED 754 Query: 248 TCSLNNREDCLAC 210 C L+ E C+AC Sbjct: 755 ACPLDQSE-CIAC 766
>RIR3_ECOLI (P39452) Ribonucleoside-diphosphate reductase 2 alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase 2) (R1E protein) Length = 713 Score = 42.0 bits (97), Expect = 0.001 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Frame = -1 Query: 551 AIYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHM-DQANSGKLTSLHFHTWSKGLKTGM 375 A+Y+ +EI + ++D + ++DQ SL + D A + + + W KG+KT + Sbjct: 632 ALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-L 690 Query: 374 YYLRTRAAA 348 YY+R R A Sbjct: 691 YYIRLRQMA 699
>RIR1_HELPY (P55982) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 788 Score = 41.2 bits (95), Expect = 0.003 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Frame = -1 Query: 545 YKTVWEIKQKTVVDMAVDRGCYIDQSQSLNI--HMDQANSGKLTSLHFHTWSKGLKTGMY 372 Y + ++I K ++ A R +IDQ QSLN+ ++ A+ L ++ W GLK+ Y Sbjct: 705 YTSAYDIDAKDLIKAAAVRQKWIDQGQSLNVFLRIENASGKTLHDIYTLAWKLGLKS-TY 763 Query: 371 YLRTRAAADAIKFTVDTSL 315 YLR+ + + K +D S+ Sbjct: 764 YLRSESPSIDEKSVLDRSV 782
>RIR1_HELPJ (Q9ZLF9) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 788 Score = 40.4 bits (93), Expect = 0.004 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Frame = -1 Query: 545 YKTVWEIKQKTVVDMAVDRGCYIDQSQSLNI--HMDQANSGKLTSLHFHTWSKGLKTGMY 372 Y + ++I K ++ A R +IDQ QS+N+ ++ A+ L ++ W GLK+ Y Sbjct: 705 YTSAYDIDAKDLIKAAAVRQKWIDQGQSINVFLRIENASGKTLHEIYTLAWKLGLKS-TY 763 Query: 371 YLRTRAAADAIKFTVDTSL 315 YLR+ + + K +D S+ Sbjct: 764 YLRSESPSIDEKSVLDRSV 782
>RIR1_MYCTU (P0A5W8) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase R1 subunit) Length = 725 Score = 37.7 bits (86), Expect = 0.028 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Frame = -1 Query: 545 YKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHM-DQANSGKLTSLHFHTWSKGLKTGMYY 369 Y+ +EI + ++D ++DQ SL + D A + + + W KG+KT +YY Sbjct: 646 YEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQIYAWRKGIKT-LYY 704 Query: 368 LRTRAAA 348 +R R A Sbjct: 705 IRLRQMA 711
>RIR1_MYCBO (P0A5W9) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase R1 subunit) Length = 725 Score = 37.7 bits (86), Expect = 0.028 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Frame = -1 Query: 545 YKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHM-DQANSGKLTSLHFHTWSKGLKTGMYY 369 Y+ +EI + ++D ++DQ SL + D A + + + W KG+KT +YY Sbjct: 646 YEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQIYAWRKGIKT-LYY 704 Query: 368 LRTRAAA 348 +R R A Sbjct: 705 IRLRQMA 711
>RIR1_MYCLE (Q9CBQ0) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase R1 subunit) Length = 721 Score = 37.7 bits (86), Expect = 0.028 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Frame = -1 Query: 545 YKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHM-DQANSGKLTSLHFHTWSKGLKTGMYY 369 Y+ +EI + ++D ++DQ SL + D A + + + W KG+KT +YY Sbjct: 642 YQDAYEIGYQKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQIYAWRKGIKT-LYY 700 Query: 368 LRTRAAA 348 +R R A Sbjct: 701 IRLRQMA 707
>RIR3_SALTY (Q08698) Ribonucleoside-diphosphate reductase 2 alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase 2) (R1E protein) Length = 713 Score = 37.4 bits (85), Expect = 0.036 Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Frame = -1 Query: 548 IYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHM-DQANSGKLTSLHFHTWSKGLKTGMY 372 +Y+ ++I + ++D + ++DQ SL + D A + + + W KG+K+ +Y Sbjct: 633 MYQDAYDIGPEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKS-LY 691 Query: 371 YLRTRAAA 348 Y+R R A Sbjct: 692 YIRLRQLA 699
>RIR1_TREPA (O83972) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 845 Score = 35.8 bits (81), Expect = 0.11 Identities = 19/66 (28%), Positives = 42/66 (63%), Gaps = 1/66 (1%) Frame = -1 Query: 548 IYKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHMDQANSGK-LTSLHFHTWSKGLKTGMY 372 +YK+ ++Q+ + A R +IDQ+QS+N+++ + K + L+ + W G+K+ +Y Sbjct: 770 LYKSAHAVEQRWSIRAAGLRQRHIDQAQSVNLYITTDFTLKQVLDLYVYAWEVGMKS-LY 828 Query: 371 YLRTRA 354 Y+R+++ Sbjct: 829 YVRSQS 834
>RIR1_BUCAI (P57276) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 761 Score = 34.7 bits (78), Expect = 0.23 Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 8/105 (7%) Frame = -1 Query: 596 DGSVQKITEIPDDLKAIYKTVWEIKQKT-VVDMAVDRGCYIDQSQSLNIHMDQA----NS 432 DG ++++ L+ Y+ +W+I T + +A +IDQS S+N H D A N Sbjct: 649 DGILRQVVPEYKKLRLQYELLWDIPNNTGYLQLAGIMQKFIDQSISVNTHYDPARFLNNK 708 Query: 431 GKLTSLHFH---TWSKGLKTGMYYLRTRAAADAIKFTVDTSLLKD 306 + L + ++ GLKT +YY TR ++ + S+ +D Sbjct: 709 IPMKQLLYDLLLSYKLGLKT-LYYQNTRDGSEDDQNITSKSITED 752
>RIR1_BACSU (P50620) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 700 Score = 30.8 bits (68), Expect = 3.4 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Frame = -1 Query: 545 YKTVWEIKQKTVVDMAVDRGCYIDQSQSLNIHM-DQANSGKLTSLHFHTWSKGLKTGMYY 369 YK +++ VVDM +IDQ S + + D + L + + +G+KT +YY Sbjct: 626 YKEAYDMDMFKVVDMIATIQQHIDQGISFTLFLKDTMTTRDLNRIDLYAHHRGIKT-IYY 684 Query: 368 LRTR 357 RT+ Sbjct: 685 ARTK 688
>TOP2B_MOUSE (Q64511) DNA topoisomerase 2-beta (EC 5.99.1.3) (DNA topoisomerase| II, beta isozyme) Length = 1612 Score = 30.4 bits (67), Expect = 4.4 Identities = 18/49 (36%), Positives = 26/49 (53%) Frame = -1 Query: 368 LRTRAAADAIKFTVDTSLLKDKKPANAEEEEDLEAKMAQVTCSLNNRED 222 L RAAA+ K+T D S +D A A++ DLE + + N+ ED Sbjct: 1347 LLRRAAAERPKYTFDFSEEEDDDAAAADDSNDLEELKVKASPITNDGED 1395
>GLMS_THETN (Q8R841) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 607 Score = 30.4 bits (67), Expect = 4.4 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Frame = -1 Query: 596 DGSVQKITEIPDDLKAIYKTVWEIK-QKTVVDMAVDRGCYIDQSQSL 459 +G V K+ IPD LK + + + Q MAV++GC +D+ ++L Sbjct: 554 EGVVDKVIYIPDTLKELTPVLTVVPLQLLAYYMAVEKGCDVDKPRNL 600
>POL_HV1JR (P20875) Gag-Pol polyprotein (Pr160Gag-Pol) [Contains: Matrix protein| p17 (MA); Capsid protein p24 (CA); p2 spacer peptide; Nucleocapsid protein* (NC*); Transframe peptide (TF) (p6 pol); Protease (EC 3.4.23.16) (Retropepsin) (PR); Reverse trans Length = 1438 Score = 30.4 bits (67), Expect = 4.4 Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 8/93 (8%) Frame = -1 Query: 605 IYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDR--------GCYIDQSQSLNIH 450 IY V+++ ++ KA+ + + + ++ +++A +R G Y D S+ L + Sbjct: 860 IYAGIKVKQLCKLLRGTKALTEVI-PLTKEAELELAENREILKEPVHGVYYDPSKDLIVE 918 Query: 449 MDQANSGKLTSLHFHTWSKGLKTGMYYLRTRAA 351 + + G+ T F K LKTG Y RTR A Sbjct: 919 IQKQGQGQWTYQIFQEPFKNLKTGK-YARTRGA 950
>RPN11_ASHGO (Q750E9) 26S proteasome regulatory subunit RPN11| Length = 311 Score = 29.6 bits (65), Expect = 7.6 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Frame = -1 Query: 464 SLNI--HMDQANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLKDKKPAN 291 SLNI H A L +LH W GLK Y + R +A K +V + ++ Sbjct: 203 SLNIDYHKTSAELNMLMNLHKEQWQSGLKMHDYKEKERINLEATKKSV---RIAEQYTKR 259 Query: 290 AEEEEDL 270 EEE++L Sbjct: 260 IEEEKEL 266
>MURE_LEPIN (Q8F4J4) UDP-N-acetylmuramoylalanyl-D-glutamate--2,| 6-diaminopimelate ligase (EC 6.3.2.13) (UDP-N-acetylmuramyl-tripeptide synthetase) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase) Length = 506 Score = 29.6 bits (65), Expect = 7.6 Identities = 20/82 (24%), Positives = 38/82 (46%) Frame = -1 Query: 506 DMAVDRGCYIDQSQSLNIHMDQANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTV 327 D +D G + SLN+ + + +T++ S GLK G R +++ V Sbjct: 158 DRVIDTGYTTPDASSLNLILKEMKEEGITTVFMEASSHGLKLG------RMNGISVRAGV 211 Query: 326 DTSLLKDKKPANAEEEEDLEAK 261 T+L +D +++ E+ E+K Sbjct: 212 FTNLTQDHLDFHSDMEDYFESK 233
>MURE_LEPIC (Q72R81) UDP-N-acetylmuramoylalanyl-D-glutamate--2,| 6-diaminopimelate ligase (EC 6.3.2.13) (UDP-N-acetylmuramyl-tripeptide synthetase) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase) Length = 506 Score = 29.6 bits (65), Expect = 7.6 Identities = 20/82 (24%), Positives = 38/82 (46%) Frame = -1 Query: 506 DMAVDRGCYIDQSQSLNIHMDQANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTV 327 D +D G + SLN+ + + +T++ S GLK G R +++ V Sbjct: 158 DRVIDTGYTTPDASSLNLILKEMKEEGITTVFMEASSHGLKLG------RMNGISVRAGV 211 Query: 326 DTSLLKDKKPANAEEEEDLEAK 261 T+L +D +++ E+ E+K Sbjct: 212 FTNLTQDHLDFHSDMEDYFESK 233
>GSHR_DEBHA (Q6BPI1) Glutathione reductase (EC 1.8.1.7) (GR) (GRase)| Length = 490 Score = 29.3 bits (64), Expect = 9.9 Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 11/68 (16%) Frame = -1 Query: 611 NIIYDDGSVQKITEIPDDLKAIY----------KTVWEIKQKTVVDMAVDR-GCYIDQSQ 465 NII GSV K+ +I D K I + +W + +K+++++ +D+ G ++ Q Sbjct: 258 NIIKQSGSVSKVEKIDGDRKKITLGNGQVLEVDELIWTMGRKSLINIGLDKVGVTLNDKQ 317 Query: 464 SLNIHMDQ 441 +++ Q Sbjct: 318 QVDVDQFQ 325
>SERC_LEGPA (Q5X5E7) Phosphoserine aminotransferase (EC 2.6.1.52) (PSAT)| Length = 362 Score = 29.3 bits (64), Expect = 9.9 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = -1 Query: 485 CYIDQSQSLNIHMDQANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAI 339 CY D Q +D AN L +L H ++ GL+ +Y A DA+ Sbjct: 305 CYPDLEQKF---LDMANKRGLKALKGHRFTGGLRASLYNAMPMAGVDAL 350 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,766,134 Number of Sequences: 219361 Number of extensions: 1526454 Number of successful extensions: 4576 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 4437 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4553 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5710231900 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
