ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6i22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468281.1| Oryza sativa (japonica cultivar-group), mRNA 321 2e-84
2gb|AY105931.1| Zea mays PCO081802 mRNA sequence 212 1e-51
3ref|XM_550374.1| Oryza sativa (japonica cultivar-group), mRNA 200 4e-48
4dbj|AK068858.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 4e-48
5gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare str... 123 7e-25
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
7dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
8emb|Y10861.1|NTRRR11 N.tabacum mRNA for ribonucleotide reductase... 92 3e-15
9emb|Y10862.1|NTRRR12 N.tabacum mRNA for ribonucleotide reductase... 90 1e-14
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
11dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
12dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
13gb|AF118784.1| Glycine max ribonucleotide reductase large subuni... 84 6e-13
14gb|AY484588.1| Musa acuminata clone MuG9, genomic sequence 72 2e-09
15emb|AJ718268.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT4-32-28... 60 9e-06
16ref|NM_127748.2| Arabidopsis thaliana R1; ribonucleoside-diphosp... 58 4e-05
17gb|AY035080.1| Arabidopsis thaliana putative ribonucleoside-diph... 58 4e-05
18gb|BT008573.1| Arabidopsis thaliana clone U09140 putative ribonu... 58 4e-05
19gb|AF325052.2|AF325052 Arabidopsis thaliana At2g21790 (At2g21790... 58 4e-05
20gb|AF092841.1|AF092841 Arabidopsis thaliana ribonucleoside-dipho... 58 4e-05
21gb|AF118785.1| Glycine max ribonucleotide reductase large subuni... 48 0.035
22gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8 map ... 46 0.14
23emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 46 0.14
24gb|AC138671.16| Mus musculus chromosome 5, clone RP23-443N7, com... 44 0.54
25gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 44 0.54
26ref|NM_209392.1| Eremothecium gossypii ADL057Wp (ADL057W), mRNA 44 0.54
27gb|AC117640.14| Mus musculus chromosome 5, clone RP23-228I1, com... 44 0.54
28gb|AC158942.7| Mus musculus chromosome 5, clone RP23-240A11, com... 44 0.54
29ref|XM_370503.1| Magnaporthe grisea 70-15 chromosome II hypothet... 42 2.1
30ref|XM_746461.1| Aspergillus fumigatus Af293 hypothetical protei... 42 2.1
31gb|AC132408.2| Mus musculus BAC clone RP23-346A12 from chromosom... 42 2.1
32emb|CR352300.8| Zebrafish DNA sequence from clone DKEY-65L5 in l... 42 2.1
33gb|AC122306.4| Mus musculus BAC clone RP23-285M8 from 18, comple... 42 2.1
34gb|AC146757.19| Medicago truncatula clone mth2-16n21, complete s... 42 2.1
35gb|AC147536.12| Medicago truncatula clone mth2-9l3, complete seq... 42 2.1
36emb|CR352324.11| Zebrafish DNA sequence from clone CH211-218L14 ... 42 2.1
37gb|AC109448.3| Homo sapiens chromosome 5 clone RP11-141G2, compl... 42 2.1
38gb|AC108096.2| Homo sapiens chromosome 5 clone RP11-107O20, comp... 42 2.1
39gb|AC092276.2| Homo sapiens chromosome 5 clone CTD-2010P7, compl... 42 2.1
40gb|AC158660.4| Mus musculus 6 BAC RP23-387H1 (Roswell Park Cance... 42 2.1
41ref|XM_527030.1| PREDICTED: Pan troglodytes protocadherin alpha ... 40 8.5
42gb|AC005609.1| Homo sapiens chromosome 5, BAC clone 203o13 (LBNL... 40 8.5
43ref|NM_026510.1| Mus musculus FtsJ homolog 2 (E. coli) (Ftsj2), ... 40 8.5
44gb|BC080863.1| Mus musculus protocadherin alpha 7, mRNA (cDNA cl... 40 8.5
45gb|BC064776.1| Mus musculus FtsJ homolog 2 (E. coli), mRNA (cDNA... 40 8.5
46ref|XM_868039.1| PREDICTED: Bos taurus similar to protocadherin ... 40 8.5
47gb|AY389958.1| Protopterus dolloi TATA box binding protein (TBP)... 40 8.5
48gb|AE007227.1| Sinorhizobium meliloti 1021 plasmid pSymA section... 40 8.5
49ref|NG_000016.1| Homo sapiens protocadherin alpha cluster (PCDHA... 40 8.5
50ref|NM_007766.1| Mus musculus protocadherin alpha 4 (Pcdha4), mRNA 40 8.5
51ref|NM_031856.1| Homo sapiens protocadherin alpha 8 (PCDHA8), tr... 40 8.5
52ref|NM_018911.2| Homo sapiens protocadherin alpha 8 (PCDHA8), tr... 40 8.5
53ref|XM_991191.1| PREDICTED: Mus musculus protocadherin alpha 7 (... 40 8.5
54ref|XM_908840.2| PREDICTED: Mus musculus similar to protocadheri... 40 8.5
55ref|XM_991056.1| PREDICTED: Mus musculus protocadherin alpha 6 (... 40 8.5
56gb|AC091519.16| Mus musculus strain 129/SvJ chromosome 2 clone m... 40 8.5
57gb|AC122041.4| Mus musculus BAC clone RP24-443H19 from chromosom... 40 8.5
58gb|AC124714.4| Mus musculus BAC clone RP24-128K11 from chromosom... 40 8.5
59gb|BC060211.1| Mus musculus protocadherin alpha 4, mRNA (cDNA cl... 40 8.5
60ref|XM_763824.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 8.5
61gb|AC142355.1| Pan troglodytes BAC clone RP43-22I16 from 7, comp... 40 8.5
62gb|AC137522.11| Medicago truncatula clone mth2-9h8, complete seq... 40 8.5
63gb|BC054813.1| Mus musculus protocadherin alpha 6, mRNA (cDNA cl... 40 8.5
64gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 8.5
65gb|AC174293.6| Medicago truncatula clone mth2-70h5, complete seq... 40 8.5
66gb|AF464178.1| Mus musculus protocadherin gene, exon alpha 4 and... 40 8.5
67gb|AF464180.1| Mus musculus protocadherin mRNA, complete cds 40 8.5
68gb|BC030897.1| Mus musculus, protocadherin alpha 6, clone IMAGE:... 40 8.5
69gb|AC008631.6| Homo sapiens chromosome 5 clone CTB-163B16, compl... 40 8.5
70dbj|AK145808.1| Mus musculus blastocyst blastocyst cDNA, RIKEN f... 40 8.5
71dbj|AK149282.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 40 8.5
72ref|NM_007767.1| Mus musculus protocadherin alpha 6 (Pcdha6), mRNA 40 8.5
73ref|NM_009957.1| Mus musculus protocadherin alpha 7 (Pcdha7), mRNA 40 8.5
74ref|NM_198117.1| Mus musculus protocadherin alpha 2 (Pcdha2), mRNA 40 8.5
75dbj|AK009656.1| Mus musculus adult male tongue cDNA, RIKEN full-... 40 8.5
76gb|AF537124.1| Hymenophyllum ferrugineum chloroplast small ribos... 40 8.5
77gb|AY095130.1| Serpyllopsis caespitosa chloroplast small ribosom... 40 8.5
78gb|AY095125.1| Hymenophyllum secundum chloroplast small ribosoma... 40 8.5
79dbj|AK077929.1| Mus musculus 13 days embryo male testis cDNA, RI... 40 8.5
80gb|AC162378.2| Mus musculus BAC clone RP24-82K1 from chromosome ... 40 8.5
81dbj|AK048980.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 40 8.5
82gb|AC087772.5|AC087772 Genomic Sequence for Mus musculus, clone ... 40 8.5
83dbj|AK082702.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 40 8.5
84dbj|AK017300.1| Mus musculus 6 days neonate head cDNA, RIKEN ful... 40 8.5
85gb|AY013765.1| Mus musculus protocadherin alpha 7 mRNA, complete... 40 8.5
86gb|AY013764.1| Mus musculus protocadherin alpha 6 mRNA, complete... 40 8.5
87gb|AY013762.1| Mus musculus protocadherin alpha 4 mRNA, complete... 40 8.5
88gb|AY013760.1| Mus musculus protocadherin alpha 2 mRNA, complete... 40 8.5
89ref|NM_199503.1| Rattus norvegicus protocadherin alpha 1 (Pcdha1... 40 8.5
90ref|NM_199486.2| Rattus norvegicus protocadherin alpha 11 (Pcdha... 40 8.5
91gb|AY573973.1| Rattus norvegicus protocadherin alpha 11 (Pcdha11... 40 8.5
92gb|AY573971.1| Rattus norvegicus protocadherin alpha 1 (Pcdha1) ... 40 8.5
93dbj|AB053225.2| Mus musculus GnT-IVa gene for N-acetylglucosamin... 40 8.5
94gb|AC027683.6| Homo sapiens chromosome 16 clone CTD-2357P14, com... 40 8.5
95gb|AC020968.3| Mus musculus chromosome 18 clone RP23-193O23, com... 40 8.5
96ref|XM_221949.3| PREDICTED: Rattus norvegicus FtsJ homolog 2 (E.... 40 8.5
97gb|AF291054.1|AF291054 Mus musculus 8-oxodGTPase protein (Mth1) ... 40 8.5
98gb|AC020972.3|AC020972 Mus musculus chromosome 18 clone RP23-6P1... 40 8.5
99gb|AC008468.6|AC008468 Homo sapiens chromosome 5 clone CTC-365B8... 40 8.5
100dbj|AB113399.1| Rattus norvegicus rCNR gene for cadherin-related... 40 8.5
101dbj|AB113394.1| Rattus norvegicus rCNRv11 mRNA for cadherin-rela... 40 8.5
102dbj|AB113384.1| Rattus norvegicus rCNRv01 mRNA for cadherin-rela... 40 8.5
103emb|BX005298.9| Mouse DNA sequence from clone RP23-261D24 on chr... 40 8.5
104dbj|AB002343.1| Homo sapiens mRNA for KIAA0345 gene, partial cds 40 8.5
105dbj|AB114630.1| Mus musculus CNR gene for cadherin-related neuro... 40 8.5
106gb|AF152316.1|AF152316 Homo sapiens protocadherin alpha 8 (PCDH-... 40 8.5
107gb|AF152486.1|AF152486 Homo sapiens protocadherin alpha 8 short ... 40 8.5
108gb|AC006075.1|AC006075 Homo sapiens chromosome 16, BAC clone RPC... 40 8.5
109gb|AC132115.2| Mus musculus BAC clone RP24-146A13 from 1, comple... 40 8.5
110gb|AC131670.5| Mus musculus BAC clone RP23-307I19 from 5, comple... 40 8.5
111gb|AC140321.3| Mus musculus BAC clone RP23-402K6 from 1, complet... 40 8.5
112gb|AC158142.19| Mus musculus chromosome 15, clone RP24-342H15, c... 40 8.5
113emb|AJ007610.1|HSAJ7610 Homo sapiens mRNA for protocadherin alph... 40 8.5
114dbj|D86917.1| Mus musculus mRNA for CNR2, complete cds 40 8.5
115dbj|D86916.1| Mus musculus mRNA for CNR1, complete cds 40 8.5
116dbj|AB008179.1| Mus musculus CNR4 mRNA for Cadherin-related neur... 40 8.5
117dbj|AB026824.1| Ephydatia fluviatilis mRNA for sALK-1, complete cds 40 8.5 
>ref|XM_468281.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2433

 Score =  321 bits (162), Expect = 2e-84
 Identities = 279/318 (87%)
 Strand = Plus / Minus

                                                                        
Query: 303  cttatccttgagaagactagtgtccactgtgaatttgatcgcatccgcagcagcccgtgt 362
            |||||||||||| ||| |||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 2337 cttatccttgaggagagtagtgtccactgtgaatttgattgcatcggcagcagcgcgtgt 2278

                                                                        
Query: 363  cctcagatagtacatcccagttttcaggcccttggaccatgtgtggaagtgcagggaagt 422
             || ||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 2277 tcttagataatacattccagttttcaggcccttggaccaagcgtggaagtgcagggaagt 2218

                                                                        
Query: 423  tagcttcccggagttggcttgatccatgtggatattaaggctctgactttgatcgatata 482
            |||||||||  |||| | ||| ||||||||||||||||| || || || |||||||||||
Sbjct: 2217 tagcttcccaaagttcggttggtccatgtggatattaagactttggctctgatcgatata 2158

                                                                        
Query: 483  gcagccacggtccacagccatgtccacaacagttttctgcttgatctcccaaacagtctt 542
             || ||||| || |  |||||||| |||| ||||||||||||||| ||||| || ||  |
Sbjct: 2157 acaaccacgatcgatggccatgtcaacaatagttttctgcttgatttcccacacggttct 2098

                                                                        
Query: 543  gtaaattgctttcagatcatctgggatctcagtgatcttttggacagagccatcgtcata 602
            |||||||||||||||||||||||||||||||| ||||||||| ||||| ||||| |||||
Sbjct: 2097 gtaaattgctttcagatcatctgggatctcagagatcttttgaacagaaccatcttcata 2038

                              
Query: 603  gataatattgtttttcag 620
            || ||| |||||||||||
Sbjct: 2037 gacaatcttgtttttcag 2020
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>gb|AY105931.1| Zea mays PCO081802 mRNA sequence
          Length = 1120

 Score =  212 bits (107), Expect = 1e-51
 Identities = 233/275 (84%)
 Strand = Plus / Minus

                                                                       
Query: 325 tccactgtgaatttgatcgcatccgcagcagcccgtgtcctcagatagtacatcccagtt 384
           ||||||||||| ||||||||||| |||||||| ||||| |  ||||||||||| ||||||
Sbjct: 621 tccactgtgaacttgatcgcatcagcagcagctcgtgtgcgtagatagtacattccagtt 562

                                                                       
Query: 385 ttcaggcccttggaccatgtgtggaagtgcagggaagttagcttcccggagttggcttga 444
           ||||||||||||||||| |  |||||||| || || || ||||||||  |||| ||||| 
Sbjct: 561 ttcaggcccttggaccaagcatggaagtgaagagacgtcagcttcccaaagtttgcttgc 502

                                                                       
Query: 445 tccatgtggatattaaggctctgactttgatcgatatagcagccacggtccacagccatg 504
           |||||||||| ||| |||||||| ||||| ||||| ||||| || ||||| || ||||||
Sbjct: 501 tccatgtggacattgaggctctggctttggtcgatgtagcatccgcggtcaaccgccatg 442

                                                                       
Query: 505 tccacaacagttttctgcttgatctcccaaacagtcttgtaaattgctttcagatcatct 564
           || || | ||||||||||||||||||||||||||| ||||| |||||||| ||||| || 
Sbjct: 441 tcaactaaagttttctgcttgatctcccaaacagttttgtagattgctttaagatcgtcc 382

                                              
Query: 565 gggatctcagtgatcttttggacagagccatcgtc 599
           ||||| || |  ||||| |||||||| || |||||
Sbjct: 381 gggatttctgctatcttctggacagaaccgtcgtc 347



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 198 aatctagcttccacatgccaggcagtcctcccggttgttca 238
           ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 757 aatctagcttccacacgccaggcactcttcccggttgttca 717
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>ref|XM_550374.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3103

 Score =  200 bits (101), Expect = 4e-48
 Identities = 245/293 (83%)
 Strand = Plus / Minus

                                                                        
Query: 328  actgtgaatttgatcgcatccgcagcagcccgtgtcctcagatagtacatcccagttttc 387
            |||||||| ||||| || || ||||| || ||||| |  ||||| |||||||||||||||
Sbjct: 2571 actgtgaacttgattgcgtcagcagctgctcgtgttcgtagataatacatcccagttttc 2512

                                                                        
Query: 388  aggcccttggaccatgtgtggaagtgcagggaagttagcttcccggagttggcttgatcc 447
            |||||||||||||| |  ||||| ||||| ||||| ||||||||  |||| | ||| |||
Sbjct: 2511 aggcccttggaccaagcatggaaatgcagagaagtcagcttcccaaagtttggttgttcc 2452

                                                                        
Query: 448  atgtggatattaaggctctgactttgatcgatatagcagccacggtccacagccatgtcc 507
            ||||| | |||||| ||||| || ||||| || ||||| ||||| || ||||||||||| 
Sbjct: 2451 atgtgaacattaagactctggctctgatcaatgtagcatccacgatcaacagccatgtca 2392

                                                                        
Query: 508  acaacagttttctgcttgatctcccaaacagtcttgtaaattgctttcagatcatctggg 567
            ||||  ||||||||||| ||||||||||| || |||||||||||||| ||||||||||||
Sbjct: 2391 acaagcgttttctgctttatctcccaaaccgttttgtaaattgcttttagatcatctggg 2332

                                                                 
Query: 568  atctcagtgatcttttggacagagccatcgtcatagataatattgtttttcag 620
            ||| | || |||||||| ||||| ||||| ||||| || || || ||||||||
Sbjct: 2331 atcactgtcatcttttgaacagaaccatcttcataaattatcttatttttcag 2279



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 199  atctagcttccacatgccaggcagtcctcccggttgttca 238
            ||||| |||||||| |||| ||| ||||||||||||||||
Sbjct: 2706 atctaacttccacacgccaagcactcctcccggttgttca 2667
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>dbj|AK068858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169B12, full
            insert sequence
          Length = 3104

 Score =  200 bits (101), Expect = 4e-48
 Identities = 245/293 (83%)
 Strand = Plus / Minus

                                                                        
Query: 328  actgtgaatttgatcgcatccgcagcagcccgtgtcctcagatagtacatcccagttttc 387
            |||||||| ||||| || || ||||| || ||||| |  ||||| |||||||||||||||
Sbjct: 2571 actgtgaacttgattgcgtcagcagctgctcgtgttcgtagataatacatcccagttttc 2512

                                                                        
Query: 388  aggcccttggaccatgtgtggaagtgcagggaagttagcttcccggagttggcttgatcc 447
            |||||||||||||| |  ||||| ||||| ||||| ||||||||  |||| | ||| |||
Sbjct: 2511 aggcccttggaccaagcatggaaatgcagagaagtcagcttcccaaagtttggttgttcc 2452

                                                                        
Query: 448  atgtggatattaaggctctgactttgatcgatatagcagccacggtccacagccatgtcc 507
            ||||| | |||||| ||||| || ||||| || ||||| ||||| || ||||||||||| 
Sbjct: 2451 atgtgaacattaagactctggctctgatcaatgtagcatccacgatcaacagccatgtca 2392

                                                                        
Query: 508  acaacagttttctgcttgatctcccaaacagtcttgtaaattgctttcagatcatctggg 567
            ||||  ||||||||||| ||||||||||| || |||||||||||||| ||||||||||||
Sbjct: 2391 acaagcgttttctgctttatctcccaaaccgttttgtaaattgcttttagatcatctggg 2332

                                                                 
Query: 568  atctcagtgatcttttggacagagccatcgtcatagataatattgtttttcag 620
            ||| | || |||||||| ||||| ||||| ||||| || || || ||||||||
Sbjct: 2331 atcactgtcatcttttgaacagaaccatcttcataaattatcttatttttcag 2279



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 199  atctagcttccacatgccaggcagtcctcccggttgttca 238
            ||||| |||||||| |||| ||| ||||||||||||||||
Sbjct: 2706 atctaacttccacacgccaagcactcctcccggttgttca 2667
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>gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0049O12, from chromosome 2, complete sequence
          Length = 155154

 Score =  123 bits (62), Expect = 7e-25
 Identities = 122/142 (85%)
 Strand = Plus / Plus

                                                                          
Query: 392    ccttggaccatgtgtggaagtgcagggaagttagcttcccggagttggcttgatccatgt 451
              |||||||||| | |||||||||||||||||||||||||||  |||| | ||| |||||||
Sbjct: 154179 ccttggaccaagcgtggaagtgcagggaagttagcttcccaaagttcggttggtccatgt 154238

                                                                          
Query: 452    ggatattaaggctctgactttgatcgatatagcagccacggtccacagccatgtccacaa 511
              |||||||||| || || || ||||||||||| || ||||| || |  |||||||| ||||
Sbjct: 154239 ggatattaagactttggctctgatcgatataacaaccacgatcgatggccatgtcaacaa 154298

                                    
Query: 512    cagttttctgcttgatctccca 533
               ||||||||||||||| |||||
Sbjct: 154299 tagttttctgcttgatttccca 154320



 Score =  109 bits (55), Expect = 1e-20
 Identities = 73/79 (92%)
 Strand = Plus / Plus

                                                                          
Query: 542    tgtaaattgctttcagatcatctgggatctcagtgatcttttggacagagccatcgtcat 601
              ||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||
Sbjct: 154411 tgtaaattgctttcagatcatctgggatctcagagatcttttgaacagaaccatcttcat 154470

                                 
Query: 602    agataatattgtttttcag 620
              ||| ||| |||||||||||
Sbjct: 154471 agacaatcttgtttttcag 154489



 Score =  101 bits (51), Expect = 3e-18
 Identities = 78/87 (89%)
 Strand = Plus / Plus

                                                                          
Query: 308    ccttgagaagactagtgtccactgtgaatttgatcgcatccgcagcagcccgtgtcctca 367
              ||||||| ||| |||||||||||||||||||||| ||||| |||||||| ||||| || |
Sbjct: 153976 ccttgaggagagtagtgtccactgtgaatttgattgcatcggcagcagcgcgtgttctta 154035

                                         
Query: 368    gatagtacatcccagttttcaggccct 394
              |||| ||||| ||||||||||||||||
Sbjct: 154036 gataatacattccagttttcaggccct 154062



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                            
Query: 193    ggacgaatctagcttccacatgccaggcagtcctcccggttgttca 238
              ||||||| ||| || |||||||||| ||| || |||||||||||||
Sbjct: 153790 ggacgaacctaactaccacatgccaagcattcgtcccggttgttca 153835
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  123 bits (62), Expect = 7e-25
 Identities = 122/142 (85%)
 Strand = Plus / Minus

                                                                            
Query: 392      ccttggaccatgtgtggaagtgcagggaagttagcttcccggagttggcttgatccatgt 451
                |||||||||| | |||||||||||||||||||||||||||  |||| | ||| |||||||
Sbjct: 34350927 ccttggaccaagcgtggaagtgcagggaagttagcttcccaaagttcggttggtccatgt 34350868

                                                                            
Query: 452      ggatattaaggctctgactttgatcgatatagcagccacggtccacagccatgtccacaa 511
                |||||||||| || || || ||||||||||| || ||||| || |  |||||||| ||||
Sbjct: 34350867 ggatattaagactttggctctgatcgatataacaaccacgatcgatggccatgtcaacaa 34350808

                                      
Query: 512      cagttttctgcttgatctccca 533
                 ||||||||||||||| |||||
Sbjct: 34350807 tagttttctgcttgatttccca 34350786



 Score =  109 bits (55), Expect = 1e-20
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                            
Query: 542      tgtaaattgctttcagatcatctgggatctcagtgatcttttggacagagccatcgtcat 601
                ||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||
Sbjct: 34350695 tgtaaattgctttcagatcatctgggatctcagagatcttttgaacagaaccatcttcat 34350636

                                   
Query: 602      agataatattgtttttcag 620
                ||| ||| |||||||||||
Sbjct: 34350635 agacaatcttgtttttcag 34350617



 Score =  101 bits (51), Expect = 3e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                            
Query: 308      ccttgagaagactagtgtccactgtgaatttgatcgcatccgcagcagcccgtgtcctca 367
                ||||||| ||| |||||||||||||||||||||| ||||| |||||||| ||||| || |
Sbjct: 34351130 ccttgaggagagtagtgtccactgtgaatttgattgcatcggcagcagcgcgtgttctta 34351071

                                           
Query: 368      gatagtacatcccagttttcaggccct 394
                |||| ||||| ||||||||||||||||
Sbjct: 34351070 gataatacattccagttttcaggccct 34351044



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                              
Query: 193      ggacgaatctagcttccacatgccaggcagtcctcccggttgttca 238
                ||||||| ||| || |||||||||| ||| || |||||||||||||
Sbjct: 34351316 ggacgaacctaactaccacatgccaagcattcgtcccggttgttca 34351271
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>dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1548_F12
          Length = 118814

 Score =  123 bits (62), Expect = 7e-25
 Identities = 122/142 (85%)
 Strand = Plus / Minus

                                                                         
Query: 392   ccttggaccatgtgtggaagtgcagggaagttagcttcccggagttggcttgatccatgt 451
             |||||||||| | |||||||||||||||||||||||||||  |||| | ||| |||||||
Sbjct: 48574 ccttggaccaagcgtggaagtgcagggaagttagcttcccaaagttcggttggtccatgt 48515

                                                                         
Query: 452   ggatattaaggctctgactttgatcgatatagcagccacggtccacagccatgtccacaa 511
             |||||||||| || || || ||||||||||| || ||||| || |  |||||||| ||||
Sbjct: 48514 ggatattaagactttggctctgatcgatataacaaccacgatcgatggccatgtcaacaa 48455

                                   
Query: 512   cagttttctgcttgatctccca 533
              ||||||||||||||| |||||
Sbjct: 48454 tagttttctgcttgatttccca 48433



 Score =  109 bits (55), Expect = 1e-20
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                         
Query: 542   tgtaaattgctttcagatcatctgggatctcagtgatcttttggacagagccatcgtcat 601
             ||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||
Sbjct: 48342 tgtaaattgctttcagatcatctgggatctcagagatcttttgaacagaaccatcttcat 48283

                                
Query: 602   agataatattgtttttcag 620
             ||| ||| |||||||||||
Sbjct: 48282 agacaatcttgtttttcag 48264



 Score =  101 bits (51), Expect = 3e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                         
Query: 308   ccttgagaagactagtgtccactgtgaatttgatcgcatccgcagcagcccgtgtcctca 367
             ||||||| ||| |||||||||||||||||||||| ||||| |||||||| ||||| || |
Sbjct: 48777 ccttgaggagagtagtgtccactgtgaatttgattgcatcggcagcagcgcgtgttctta 48718

                                        
Query: 368   gatagtacatcccagttttcaggccct 394
             |||| ||||| ||||||||||||||||
Sbjct: 48717 gataatacattccagttttcaggccct 48691



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 193   ggacgaatctagcttccacatgccaggcagtcctcccggttgttca 238
             ||||||| ||| || |||||||||| ||| || |||||||||||||
Sbjct: 48963 ggacgaacctaactaccacatgccaagcattcgtcccggttgttca 48918
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>emb|Y10861.1|NTRRR11 N.tabacum mRNA for ribonucleotide reductase, clone R1-1
          Length = 2769

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 223/282 (79%)
 Strand = Plus / Minus

                                                                        
Query: 321  agtgtccactgtgaatttgatcgcatccgcagcagcccgtgtcctcagatagtacatccc 380
            |||||| |||||||| ||||| ||||| || ||||| || |  | |||||||||||| ||
Sbjct: 2368 agtgtcaactgtgaacttgatagcatcagctgcagcacgggatcgcagatagtacattcc 2309

                                                                        
Query: 381  agttttcaggcccttggaccatgtgtggaagtgcagggaagttagcttcccggagttggc 440
            ||||||||  ||| ||||||| || || || ||||||||||| || || ||  | || | 
Sbjct: 2308 agttttcaatcccctggaccaagtatgaaaatgcagggaagtaagttttccaaaatttgg 2249

                                                                        
Query: 441  ttgatccatgtggatattaaggctctgactttgatcgatatagcagccacggtccacagc 500
            ||| ||||| ||||| || ||||| ||||| ||||| || ||||| |||||||| |||||
Sbjct: 2248 ttggtccatatggatgttgaggctttgactctgatctatgtagcatccacggtctacagc 2189

                                                                        
Query: 501  catgtccacaacagttttctgcttgatctcccaaacagtcttgtaaattgctttcagatc 560
            ||| || || |  ||    |||||||||||||||||| |||| |||||| |||| || ||
Sbjct: 2188 catatcaaccaaggtccgttgcttgatctcccaaacattcttataaatttctttaagctc 2129

                                                      
Query: 561  atctgggatctcagtgatcttttggacagagccatcgtcata 602
            ||| || || |||| ||| || || ||||| ||||| |||||
Sbjct: 2128 atccggaatttcagggattttctgcacagaaccatcctcata 2087
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>emb|Y10862.1|NTRRR12 N.tabacum mRNA for ribonucleotide reductase, clone R1-2
          Length = 2840

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 180/225 (80%)
 Strand = Plus / Minus

                                                                        
Query: 321  agtgtccactgtgaatttgatcgcatccgcagcagcccgtgtcctcagatagtacatccc 380
            |||||| |||||||| ||||| ||||| || ||||| ||||  || ||||||||||| ||
Sbjct: 2501 agtgtcaactgtgaacttgatagcatcagctgcagcgcgtgatcttagatagtacattcc 2442

                                                                        
Query: 381  agttttcaggcccttggaccatgtgtggaagtgcagggaagttagcttcccggagttggc 440
             |||||||| ||| ||||||| |  || || |||||||| || ||||| ||  | || | 
Sbjct: 2441 tgttttcagacccctggaccaagcatgaaaatgcagggatgtaagctttccaaaatttgg 2382

                                                                        
Query: 441  ttgatccatgtggatattaaggctctgactttgatcgatatagcagccacggtccacagc 500
             || ||||| ||||| || || |||||||| ||||| |||||||| |||||||| |||||
Sbjct: 2381 ctggtccatatggatgttgagactctgactctgatcaatatagcatccacggtcaacagc 2322

                                                         
Query: 501  catgtccacaacagttttctgcttgatctcccaaacagtcttgta 545
            ||| || || |  ||    ||||||||||||||||||||||||||
Sbjct: 2321 catatcgaccagggtccgttgcttgatctcccaaacagtcttgta 2277
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 120/145 (82%)
 Strand = Plus / Plus

                                                                           
Query: 392     ccttggaccatgtgtggaagtgcagggaagttagcttcccggagttggcttgatccatgt 451
               |||||||||| |  ||||| ||||| ||||| ||||||||  |||| | ||| |||||||
Sbjct: 3449514 ccttggaccaagcatggaaatgcagagaagtcagcttcccaaagtttggttgttccatgt 3449573

                                                                           
Query: 452     ggatattaaggctctgactttgatcgatatagcagccacggtccacagccatgtccacaa 511
               | | |||||| ||||| || ||||| || ||||| ||||| || ||||||||||| ||||
Sbjct: 3449574 gaacattaagactctggctctgatcaatgtagcatccacgatcaacagccatgtcaacaa 3449633

                                        
Query: 512     cagttttctgcttgatctcccaaac 536
                 ||||||||||| |||||||||||
Sbjct: 3449634 gcgttttctgctttatctcccaaac 3449658



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                           
Query: 540     cttgtaaattgctttcagatcatctgggatctcagtgatcttttggacagagccatcgtc 599
               ||||||||||||||| ||||||||||||||| | || |||||||| ||||| ||||| ||
Sbjct: 3449752 cttgtaaattgcttttagatcatctgggatcactgtcatcttttgaacagaaccatcttc 3449811

                                    
Query: 600     atagataatattgtttttcag 620
               ||| || || || ||||||||
Sbjct: 3449812 ataaattatcttatttttcag 3449832



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                           
Query: 328     actgtgaatttgatcgcatccgcagcagcccgtgtcctcagatagtacatcccagttttc 387
               |||||||| ||||| || || ||||| || ||||| |  ||||| |||||||||||||||
Sbjct: 3449299 actgtgaacttgattgcgtcagcagctgctcgtgttcgtagataatacatcccagttttc 3449358

                      
Query: 388     aggccct 394
               |||||||
Sbjct: 3449359 aggccct 3449365



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                       
Query: 199     atctagcttccacatgccaggcagtcctcccggttgttca 238
               ||||| |||||||| |||| ||| ||||||||||||||||
Sbjct: 3449090 atctaacttccacacgccaagcactcctcccggttgttca 3449129
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>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0033B09
          Length = 143545

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 120/145 (82%)
 Strand = Plus / Plus

                                                                         
Query: 392   ccttggaccatgtgtggaagtgcagggaagttagcttcccggagttggcttgatccatgt 451
             |||||||||| |  ||||| ||||| ||||| ||||||||  |||| | ||| |||||||
Sbjct: 66218 ccttggaccaagcatggaaatgcagagaagtcagcttcccaaagtttggttgttccatgt 66277

                                                                         
Query: 452   ggatattaaggctctgactttgatcgatatagcagccacggtccacagccatgtccacaa 511
             | | |||||| ||||| || ||||| || ||||| ||||| || ||||||||||| ||||
Sbjct: 66278 gaacattaagactctggctctgatcaatgtagcatccacgatcaacagccatgtcaacaa 66337

                                      
Query: 512   cagttttctgcttgatctcccaaac 536
               ||||||||||| |||||||||||
Sbjct: 66338 gcgttttctgctttatctcccaaac 66362



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                         
Query: 540   cttgtaaattgctttcagatcatctgggatctcagtgatcttttggacagagccatcgtc 599
             ||||||||||||||| ||||||||||||||| | || |||||||| ||||| ||||| ||
Sbjct: 66456 cttgtaaattgcttttagatcatctgggatcactgtcatcttttgaacagaaccatcttc 66515

                                  
Query: 600   atagataatattgtttttcag 620
             ||| || || || ||||||||
Sbjct: 66516 ataaattatcttatttttcag 66536



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                         
Query: 328   actgtgaatttgatcgcatccgcagcagcccgtgtcctcagatagtacatcccagttttc 387
             |||||||| ||||| || || ||||| || ||||| |  ||||| |||||||||||||||
Sbjct: 66003 actgtgaacttgattgcgtcagcagctgctcgtgttcgtagataatacatcccagttttc 66062

                    
Query: 388   aggccct 394
             |||||||
Sbjct: 66063 aggccct 66069



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 199   atctagcttccacatgccaggcagtcctcccggttgttca 238
             ||||| |||||||| |||| ||| ||||||||||||||||
Sbjct: 65794 atctaacttccacacgccaagcactcctcccggttgttca 65833
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>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone
              P0680A03
          Length = 156054

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 120/145 (82%)
 Strand = Plus / Plus

                                                                          
Query: 392    ccttggaccatgtgtggaagtgcagggaagttagcttcccggagttggcttgatccatgt 451
              |||||||||| |  ||||| ||||| ||||| ||||||||  |||| | ||| |||||||
Sbjct: 141068 ccttggaccaagcatggaaatgcagagaagtcagcttcccaaagtttggttgttccatgt 141127

                                                                          
Query: 452    ggatattaaggctctgactttgatcgatatagcagccacggtccacagccatgtccacaa 511
              | | |||||| ||||| || ||||| || ||||| ||||| || ||||||||||| ||||
Sbjct: 141128 gaacattaagactctggctctgatcaatgtagcatccacgatcaacagccatgtcaacaa 141187

                                       
Query: 512    cagttttctgcttgatctcccaaac 536
                ||||||||||| |||||||||||
Sbjct: 141188 gcgttttctgctttatctcccaaac 141212



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                          
Query: 540    cttgtaaattgctttcagatcatctgggatctcagtgatcttttggacagagccatcgtc 599
              ||||||||||||||| ||||||||||||||| | || |||||||| ||||| ||||| ||
Sbjct: 141306 cttgtaaattgcttttagatcatctgggatcactgtcatcttttgaacagaaccatcttc 141365

                                   
Query: 600    atagataatattgtttttcag 620
              ||| || || || ||||||||
Sbjct: 141366 ataaattatcttatttttcag 141386



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                          
Query: 328    actgtgaatttgatcgcatccgcagcagcccgtgtcctcagatagtacatcccagttttc 387
              |||||||| ||||| || || ||||| || ||||| |  ||||| |||||||||||||||
Sbjct: 140853 actgtgaacttgattgcgtcagcagctgctcgtgttcgtagataatacatcccagttttc 140912

                     
Query: 388    aggccct 394
              |||||||
Sbjct: 140913 aggccct 140919



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                      
Query: 199    atctagcttccacatgccaggcagtcctcccggttgttca 238
              ||||| |||||||| |||| ||| ||||||||||||||||
Sbjct: 140644 atctaacttccacacgccaagcactcctcccggttgttca 140683
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>gb|AF118784.1| Glycine max ribonucleotide reductase large subunit A mRNA, complete
            cds
          Length = 3061

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 195/246 (79%)
 Strand = Plus / Minus

                                                                        
Query: 366  cagatagtacatcccagttttcaggcccttggaccatgtgtggaagtgcagggaagttag 425
            |||||| ||||||||||| ||||  ||||| |||||||  | ||| ||||  ||||||| 
Sbjct: 2561 cagataatacatcccagtcttcaaaccctttgaccatgcatagaaatgcaaagaagttaa 2502

                                                                        
Query: 426  cttcccggagttggcttgatccatgtggatattaaggctctgactttgatcgatatagca 485
            ||| ||  |||||| |||||||||||| ||||| | ||||||||| || || || |||||
Sbjct: 2501 ctttccaaagttgggttgatccatgtgaatattcaagctctgactctggtctatgtagca 2442

                                                                        
Query: 486  gccacggtccacagccatgtccacaacagttttctgcttgatctcccaaacagtcttgta 545
             || |  || |||||||| || || |  || || ||||| ||||||||||||||||||||
Sbjct: 2441 tcctctatcaacagccatatcaaccaatgtcttttgcttaatctcccaaacagtcttgta 2382

                                                                        
Query: 546  aattgctttcagatcatctgggatctcagtgatcttttggacagagccatcgtcatagat 605
             ||   |||||||||||| || || || | ||| || || || || ||||| ||||||||
Sbjct: 2381 tatgattttcagatcatcaggtatttctgggattttctgaactgaaccatcctcatagat 2322

                  
Query: 606  aatatt 611
            ||||||
Sbjct: 2321 aatatt 2316
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>gb|AY484588.1| Musa acuminata clone MuG9, genomic sequence
          Length = 73268

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 108/132 (81%)
 Strand = Plus / Plus

                                                                         
Query: 408   gaagtgcagggaagttagcttcccggagttggcttgatccatgtggatattaaggctctg 467
             ||||||||| || |||||||||||  | || |  || |||||||||||||||||||||||
Sbjct: 9942  gaagtgcagcgatgttagcttcccaaaatttggctggtccatgtggatattaaggctctg 10001

                                                                         
Query: 468   actttgatcgatatagcagccacggtccacagccatgtccacaacagttttctgcttgat 527
             ||| ||||| || || || ||||| || ||||||||||| || | |||  | || || ||
Sbjct: 10002 actctgatctatgtaacacccacgatcaacagccatgtcaactagagtcctttgtttaat 10061

                         
Query: 528   ctcccaaacagt 539
             ||||||||||||
Sbjct: 10062 ctcccaaacagt 10073



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 321  agtgtccactgtgaatttgatcgcatccgcagcagc 356
            ||||||||| || || ||||| ||||||||||||||
Sbjct: 9728 agtgtccacagtaaacttgattgcatccgcagcagc 9763
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>emb|AJ718268.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT4-32-280, cultivar Bright
           Yellow 2
          Length = 211

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 110/137 (80%)
 Strand = Plus / Minus

                                                                       
Query: 367 agatagtacatcccagttttcaggcccttggaccatgtgtggaagtgcagggaagttagc 426
           ||||||||||| || |||||||| ||| ||||||| |  || || |||||||| || |||
Sbjct: 158 agatagtacattcctgttttcagacccctggaccaagcatgaaaatgcagggatgtaagc 99

                                                                       
Query: 427 ttcccggagttggcttgatccatgtggatattaaggctctgactttgatcgatatagcag 486
           || ||  | || |  || ||||| ||||| || || |||||||| ||||| ||| |||| 
Sbjct: 98  tttccaaaatttggctggtccatatggatgttgagactctgactctgatcaatanagcat 39

                            
Query: 487 ccacggtccacagccat 503
           |||||||||||||||||
Sbjct: 38  ccacggtccacagccat 22
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>ref|NM_127748.2| Arabidopsis thaliana R1; ribonucleoside-diphosphate reductase
            AT2G21790 (R1) mRNA, complete cds
          Length = 2887

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 161/205 (78%)
 Strand = Plus / Minus

                                                                        
Query: 370  tagtacatcccagttttcaggcccttggaccatgtgtggaagtgcagggaagttagcttc 429
            ||||||||||| |||||||| |||||   ||| || | |||||| || ||||| || || 
Sbjct: 2444 tagtacatcccggttttcagaccctttttccaagtatagaagtgtagcgaagtgagtttt 2385

                                                                        
Query: 430  ccggagttggcttgatccatgtggatattaaggctctgactttgatcgatatagcagcca 489
             || |||||| ||  |||||||| || || | ||| || |||||||| || ||||| |||
Sbjct: 2384 gcgaagttgggtttgtccatgtgtatgtttaagctttggctttgatctatgtagcatcca 2325

                                                                        
Query: 490  cggtccacagccatgtccacaacagttttctgcttgatctcccaaacagtcttgtaaatt 549
            || ||  ||||||||||||| || ||| |||| ||||| ||||| |||||  ||||||| 
Sbjct: 2324 cgatcagcagccatgtccaccactgttctctgtttgatttcccagacagttctgtaaatc 2265

                                     
Query: 550  gctttcagatcatctgggatctcag 574
            || ||||  ||||| || |||||||
Sbjct: 2264 gccttcaagtcatcaggtatctcag 2240
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>gb|AY035080.1| Arabidopsis thaliana putative ribonucleoside-diphosphate reductase
            large subunit (At2g21790) mRNA, complete cds
          Length = 2896

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 161/205 (78%)
 Strand = Plus / Minus

                                                                        
Query: 370  tagtacatcccagttttcaggcccttggaccatgtgtggaagtgcagggaagttagcttc 429
            ||||||||||| |||||||| |||||   ||| || | |||||| || ||||| || || 
Sbjct: 2444 tagtacatcccggttttcagaccctttttccaagtatagaagtgtagcgaagtgagtttt 2385

                                                                        
Query: 430  ccggagttggcttgatccatgtggatattaaggctctgactttgatcgatatagcagcca 489
             || |||||| ||  |||||||| || || | ||| || |||||||| || ||||| |||
Sbjct: 2384 gcgaagttgggtttgtccatgtgtatgtttaagctttggctttgatctatgtagcatcca 2325

                                                                        
Query: 490  cggtccacagccatgtccacaacagttttctgcttgatctcccaaacagtcttgtaaatt 549
            || ||  ||||||||||||| || ||| |||| ||||| ||||| |||||  ||||||| 
Sbjct: 2324 cgatcagcagccatgtccaccactgttctctgtttgatttcccagacagttctgtaaatc 2265

                                     
Query: 550  gctttcagatcatctgggatctcag 574
            || ||||  ||||| || |||||||
Sbjct: 2264 gccttcaagtcatcaggtatctcag 2240
to top
>gb|BT008573.1| Arabidopsis thaliana clone U09140 putative ribonucleoside-diphosphate
            reductase large subunit (At2g21790) mRNA, complete cds
          Length = 2516

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 161/205 (78%)
 Strand = Plus / Minus

                                                                        
Query: 370  tagtacatcccagttttcaggcccttggaccatgtgtggaagtgcagggaagttagcttc 429
            ||||||||||| |||||||| |||||   ||| || | |||||| || ||||| || || 
Sbjct: 2270 tagtacatcccggttttcagaccctttttccaagtatagaagtgtagcgaagtgagtttt 2211

                                                                        
Query: 430  ccggagttggcttgatccatgtggatattaaggctctgactttgatcgatatagcagcca 489
             || |||||| ||  |||||||| || || | ||| || |||||||| || ||||| |||
Sbjct: 2210 gcgaagttgggtttgtccatgtgtatgtttaagctttggctttgatctatgtagcatcca 2151

                                                                        
Query: 490  cggtccacagccatgtccacaacagttttctgcttgatctcccaaacagtcttgtaaatt 549
            || ||  ||||||||||||| || ||| |||| ||||| ||||| |||||  ||||||| 
Sbjct: 2150 cgatcagcagccatgtccaccactgttctctgtttgatttcccagacagttctgtaaatc 2091

                                     
Query: 550  gctttcagatcatctgggatctcag 574
            || ||||  ||||| || |||||||
Sbjct: 2090 gccttcaagtcatcaggtatctcag 2066
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>gb|AF325052.2|AF325052 Arabidopsis thaliana At2g21790 (At2g21790/F7D8.11) mRNA, complete
           cds
          Length = 598

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 161/205 (78%)
 Strand = Plus / Minus

                                                                       
Query: 370 tagtacatcccagttttcaggcccttggaccatgtgtggaagtgcagggaagttagcttc 429
           ||||||||||| |||||||| |||||   ||| || | |||||| || ||||| || || 
Sbjct: 261 tagtacatcccggttttcagaccctttttccaagtatagaagtgtagcgaagtgagtttt 202

                                                                       
Query: 430 ccggagttggcttgatccatgtggatattaaggctctgactttgatcgatatagcagcca 489
            || |||||| ||  |||||||| || || | ||| || |||||||| || ||||| |||
Sbjct: 201 gcgaagttgggtttgtccatgtgtatgtttaagctttggctttgatctatgtagcatcca 142

                                                                       
Query: 490 cggtccacagccatgtccacaacagttttctgcttgatctcccaaacagtcttgtaaatt 549
           || ||  ||||||||||||| || ||| |||| ||||| ||||| |||||  ||||||| 
Sbjct: 141 cgatcagcagccatgtccaccactgttctctgtttgatttcccagacagttctgtaaatc 82

                                    
Query: 550 gctttcagatcatctgggatctcag 574
           || ||||  ||||| || |||||||
Sbjct: 81  gccttcaagtcatcaggtatctcag 57
to top
>gb|AF092841.1|AF092841 Arabidopsis thaliana ribonucleoside-diphosphate reductase large
            subunit mRNA, complete cds
          Length = 2657

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 161/205 (78%)
 Strand = Plus / Minus

                                                                        
Query: 370  tagtacatcccagttttcaggcccttggaccatgtgtggaagtgcagggaagttagcttc 429
            ||||||||||| |||||||| |||||   ||| || | |||||| || ||||| || || 
Sbjct: 2325 tagtacatcccggttttcagaccctttttccaagtatagaagtgtagcgaagtgagtttt 2266

                                                                        
Query: 430  ccggagttggcttgatccatgtggatattaaggctctgactttgatcgatatagcagcca 489
             || |||||| ||  |||||||| || || | ||| || |||||||| || ||||| |||
Sbjct: 2265 gcgaagttgggtttgtccatgtgtatgtttaagctttggctttgatctatgtagcatcca 2206

                                                                        
Query: 490  cggtccacagccatgtccacaacagttttctgcttgatctcccaaacagtcttgtaaatt 549
            || ||  ||||||||||||| || ||| |||| ||||| ||||| |||||  ||||||| 
Sbjct: 2205 cgatcagcagccatgtccaccactgttctctgtttgatttcccagacagttctgtaaatc 2146

                                     
Query: 550  gctttcagatcatctgggatctcag 574
            || ||||  ||||| || |||||||
Sbjct: 2145 gccttcaagtcatcaggtatctcag 2121
to top
>gb|AF118785.1| Glycine max ribonucleotide reductase large subunit B mRNA, complete
            cds
          Length = 2649

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                        
Query: 367  agatagtacatcccagttttcaggcccttggaccatgtgtggaagtgcagggaagttagc 426
            ||||| ||||| |||||||| || |||||||||||||  |  || |||| |||||| || 
Sbjct: 2305 agataatacattccagtttttagacccttggaccatgcataaaactgcaaggaagtcagt 2246

                                            
Query: 427  ttcccggagttggcttgatccatgtggatatt 458
            || ||  |||||| |||||||||||| |||||
Sbjct: 2245 tttccaaagttgggttgatccatgtgaatatt 2214
to top
>gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8 map mi238, complete
             sequence
          Length = 107848

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                         
Query: 469   ctttgatcgatatagcagccacggtccacagccatgtccacaacagttttctgcttgatc 528
             |||||||| || ||||| ||||| ||  ||||||||||||| || ||| |||| ||||| 
Sbjct: 27999 ctttgatctatgtagcatccacgatcagcagccatgtccaccactgttctctgtttgatt 27940

                        
Query: 529   tcccaaacagt 539
             ||||| |||||
Sbjct: 27939 tcccagacagt 27929
to top
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia
          Length = 1923819

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 519    ctgcttgatctcccaaacagtcttgta 545
              |||||||||||||||||| ||||||||
Sbjct: 825854 ctgcttgatctcccaaacggtcttgta 825880



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                          
Query: 331    gtgaatttgatcgcatccgcagcagcccgtgtcctcagatagtacatcccagttttcagg 390
              ||||| |||||||| ||||| || ||| | ||||  || ||||||| |||||||||||||
Sbjct: 825666 gtgaacttgatcgcgtccgctgccgcctgcgtccggaggtagtacagcccagttttcagg 825725

                
Query: 391    cc 392
              ||
Sbjct: 825726 cc 825727
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>gb|AC138671.16| Mus musculus chromosome 5, clone RP23-443N7, complete sequence
          Length = 196443

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 15     atataggtggcatatatatata 36
              ||||||||||||||||||||||
Sbjct: 189964 atataggtggcatatatatata 189985
to top
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV,
              complete sequence
          Length = 1466886

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 370    tagtacatcccagttttcaggccctt 395
              ||||||||||| ||||||||||||||
Sbjct: 579363 tagtacatccctgttttcaggccctt 579338
to top
>ref|NM_209392.1| Eremothecium gossypii ADL057Wp (ADL057W), mRNA
          Length = 2673

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 370  tagtacatcccagttttcaggccctt 395
            ||||||||||| ||||||||||||||
Sbjct: 2228 tagtacatccctgttttcaggccctt 2203
to top
>gb|AC117640.14| Mus musculus chromosome 5, clone RP23-228I1, complete sequence
          Length = 138354

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 15   atataggtggcatatatatata 36
            ||||||||||||||||||||||
Sbjct: 6478 atataggtggcatatatatata 6457
to top
>gb|AC158942.7| Mus musculus chromosome 5, clone RP23-240A11, complete sequence
          Length = 194039

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 15     atataggtggcatatatatata 36
              ||||||||||||||||||||||
Sbjct: 141647 atataggtggcatatatatata 141626
to top
>ref|XM_370503.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein
            (MG07000.4) partial mRNA
          Length = 2730

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 525  gatctcccaaacagtcttgta 545
            |||||||||||||||||||||
Sbjct: 2061 gatctcccaaacagtcttgta 2041
to top
>ref|XM_746461.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g12780)
           partial mRNA
          Length = 894

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 552 tttcagatcatctgggatctc 572
           |||||||||||||||||||||
Sbjct: 748 tttcagatcatctgggatctc 768
to top
>gb|AC132408.2| Mus musculus BAC clone RP23-346A12 from chromosome 18, complete
             sequence
          Length = 191613

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    tataggtggcatatatatata 36
             |||||||||||||||||||||
Sbjct: 36638 tataggtggcatatatatata 36618
to top
>emb|CR352300.8| Zebrafish DNA sequence from clone DKEY-65L5 in linkage group 12,
             complete sequence
          Length = 76062

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 400   catgtgtggaagtgcagggaa 420
             |||||||||||||||||||||
Sbjct: 13067 catgtgtggaagtgcagggaa 13047
to top
>gb|AC122306.4| Mus musculus BAC clone RP23-285M8 from 18, complete sequence
          Length = 177969

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 16   tataggtggcatatatatata 36
            |||||||||||||||||||||
Sbjct: 1521 tataggtggcatatatatata 1541
to top
>gb|AC146757.19| Medicago truncatula clone mth2-16n21, complete sequence
          Length = 135915

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 597    gtcatagataatattgttttt 617
              |||||||||||||||||||||
Sbjct: 110081 gtcatagataatattgttttt 110061
to top
>gb|AC147536.12| Medicago truncatula clone mth2-9l3, complete sequence
          Length = 111486

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 597   gtcatagataatattgttttt 617
             |||||||||||||||||||||
Sbjct: 85649 gtcatagataatattgttttt 85629
to top
>emb|CR352324.11| Zebrafish DNA sequence from clone CH211-218L14 in linkage group 12,
              complete sequence
          Length = 206894

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 400    catgtgtggaagtgcagggaa 420
              |||||||||||||||||||||
Sbjct: 201814 catgtgtggaagtgcagggaa 201834
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>gb|AC109448.3| Homo sapiens chromosome 5 clone RP11-141G2, complete sequence
          Length = 163817

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 15     atataggtggcatatatatatacac 39
              ||||| |||||||||||||||||||
Sbjct: 131077 atatatgtggcatatatatatacac 131101
to top
>gb|AC108096.2| Homo sapiens chromosome 5 clone RP11-107O20, complete sequence
          Length = 160808

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 15    atataggtggcatatatatatacac 39
             ||||| |||||||||||||||||||
Sbjct: 39188 atatatgtggcatatatatatacac 39212
to top
>gb|AC092276.2| Homo sapiens chromosome 5 clone CTD-2010P7, complete sequence
          Length = 84404

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 15    atataggtggcatatatatatacac 39
             ||||| |||||||||||||||||||
Sbjct: 39722 atatatgtggcatatatatatacac 39746
to top
>gb|AC158660.4| Mus musculus 6 BAC RP23-387H1 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 199439

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 15    atataggtggcatatatatatacac 39
             ||||| |||||||||||||||||||
Sbjct: 74011 atatacgtggcatatatatatacac 74035
to top
>ref|XM_527030.1| PREDICTED: Pan troglodytes protocadherin alpha 8 (LOC471652), mRNA
          Length = 2409

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1168 tcagggagcaggtcacctgc 1149
to top
>gb|AC005609.1| Homo sapiens chromosome 5, BAC clone 203o13 (LBNL H155), complete
             sequence
          Length = 157970

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   tcagggagcaggtcacctgc 255
             ||||||||||||||||||||
Sbjct: 49609 tcagggagcaggtcacctgc 49628
to top
>ref|NM_026510.1| Mus musculus FtsJ homolog 2 (E. coli) (Ftsj2), mRNA
          Length = 1443

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 492 gtccacagccatgtccacaa 511
           ||||||||||||||||||||
Sbjct: 587 gtccacagccatgtccacaa 568
to top
>gb|BC080863.1| Mus musculus protocadherin alpha 7, mRNA (cDNA clone MGC:90581
            IMAGE:30356469), complete cds
          Length = 3882

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1290 tcagggagcaggtcacctgc 1271
to top
>gb|BC064776.1| Mus musculus FtsJ homolog 2 (E. coli), mRNA (cDNA clone MGC:76617
           IMAGE:30094986), complete cds
          Length = 1431

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 492 gtccacagccatgtccacaa 511
           ||||||||||||||||||||
Sbjct: 555 gtccacagccatgtccacaa 536
to top
>ref|XM_868039.1| PREDICTED: Bos taurus similar to protocadherin alpha 13 isoform 2
            precursor (LOC616072), mRNA
          Length = 2463

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1168 tcagggagcaggtcacctgc 1149
to top
>gb|AY389958.1| Protopterus dolloi TATA box binding protein (TBP)-associated factor
           mRNA, partial cds
          Length = 753

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 320 tagtgtccactgtgaatttg 339
           ||||||||||||||||||||
Sbjct: 288 tagtgtccactgtgaatttg 307
to top
>gb|AE007227.1| Sinorhizobium meliloti 1021 plasmid pSymA section 33 of 121 of the
            complete plasmid sequence
          Length = 13476

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 337  ttgatcgcatccgcagcagc 356
            ||||||||||||||||||||
Sbjct: 7233 ttgatcgcatccgcagcagc 7214
to top
>ref|NG_000016.1| Homo sapiens protocadherin alpha cluster (PCDHA@) on chromosome 5
          Length = 297736

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    tcagggagcaggtcacctgc 255
              ||||||||||||||||||||
Sbjct: 108362 tcagggagcaggtcacctgc 108343
to top
>ref|NM_007766.1| Mus musculus protocadherin alpha 4 (Pcdha4), mRNA
          Length = 5323

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1245 tcagggagcaggtcacctgc 1226
to top
>ref|NM_031856.1| Homo sapiens protocadherin alpha 8 (PCDHA8), transcript variant 2,
            mRNA
          Length = 2445

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1168 tcagggagcaggtcacctgc 1149
to top
>ref|NM_018911.2| Homo sapiens protocadherin alpha 8 (PCDHA8), transcript variant 1,
            mRNA
          Length = 5260

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1168 tcagggagcaggtcacctgc 1149
to top
>ref|XM_991191.1| PREDICTED: Mus musculus protocadherin alpha 7 (Pcdha7), mRNA
          Length = 2618

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1290 tcagggagcaggtcacctgc 1271
to top
>ref|XM_908840.2| PREDICTED: Mus musculus similar to protocadherin alpha 6 (LOC634185),
            mRNA
          Length = 2700

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1333 tcagggagcaggtcacctgc 1314
to top
>ref|XM_991056.1| PREDICTED: Mus musculus protocadherin alpha 6 (Pcdha6), mRNA
          Length = 2611

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1352 tcagggagcaggtcacctgc 1333
to top
>gb|AC091519.16| Mus musculus strain 129/SvJ chromosome 2 clone mgs1-452h5, complete
              sequence
          Length = 229220

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 537    agtcttgtaaattgctttca 556
              ||||||||||||||||||||
Sbjct: 183508 agtcttgtaaattgctttca 183527
to top
>gb|AC122041.4| Mus musculus BAC clone RP24-443H19 from chromosome 16, complete sequence
          Length = 183268

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    atgacaagccaacagtaaga 163
              ||||||||||||||||||||
Sbjct: 176239 atgacaagccaacagtaaga 176220
to top
>gb|AC124714.4| Mus musculus BAC clone RP24-128K11 from chromosome 1, complete sequence
          Length = 143929

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 15    atataggtggcatatatatataca 38
             ||||| ||||||||||||||||||
Sbjct: 18131 atatatgtggcatatatatataca 18154
to top
>gb|BC060211.1| Mus musculus protocadherin alpha 4, mRNA (cDNA clone MGC:64735
            IMAGE:6838078), complete cds
          Length = 4166

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1259 tcagggagcaggtcacctgc 1240
to top
>ref|XM_763824.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_231_32150_29586)
            partial mRNA
          Length = 2565

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 316  agactagtgtccactgtgaatttg 339
            ||||||||||||||||||| ||||
Sbjct: 1688 agactagtgtccactgtgattttg 1665
to top
>gb|AC142355.1| Pan troglodytes BAC clone RP43-22I16 from 7, complete sequence
          Length = 192927

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    gtggcatatatatatacacg 40
             ||||||||||||||||||||
Sbjct: 97076 gtggcatatatatatacacg 97095
to top
>gb|AC137522.11| Medicago truncatula clone mth2-9h8, complete sequence
          Length = 117720

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 520   tgcttgatctcccaaacagt 539
             ||||||||||||||||||||
Sbjct: 46638 tgcttgatctcccaaacagt 46657
to top
>gb|BC054813.1| Mus musculus protocadherin alpha 6, mRNA (cDNA clone IMAGE:6841317),
            partial cds
          Length = 4337

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1177 tcagggagcaggtcacctgc 1158
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 240     ggagcaggtcacctgcgcca 259
               ||||||||||||||||||||
Sbjct: 5054240 ggagcaggtcacctgcgcca 5054259
to top
>gb|AC174293.6| Medicago truncatula clone mth2-70h5, complete sequence
          Length = 132047

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 520  tgcttgatctcccaaacagt 539
            ||||||||||||||||||||
Sbjct: 1247 tgcttgatctcccaaacagt 1228
to top
>gb|AF464178.1| Mus musculus protocadherin gene, exon alpha 4 and partial cds
          Length = 3391

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1660 tcagggagcaggtcacctgc 1641
to top
>gb|AF464180.1| Mus musculus protocadherin mRNA, complete cds
          Length = 2856

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1193 tcagggagcaggtcacctgc 1174
to top
>gb|BC030897.1| Mus musculus, protocadherin alpha 6, clone IMAGE:4502027, mRNA
          Length = 2891

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1281 tcagggagcaggtcacctgc 1262
to top
>gb|AC008631.6| Homo sapiens chromosome 5 clone CTB-163B16, complete sequence
          Length = 107857

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   accatgtgtggaagtgcagg 417
             ||||||||||||||||||||
Sbjct: 94986 accatgtgtggaagtgcagg 94967
to top
>dbj|AK145808.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched
           library, clone:I1C0048I24 product:2310037B18Rik protein
           (Similar to cell division protein FTSJ), full insert
           sequence
          Length = 1408

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 492 gtccacagccatgtccacaa 511
           ||||||||||||||||||||
Sbjct: 568 gtccacagccatgtccacaa 549
to top
>dbj|AK149282.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
            clone:A930010F15 product:protocadherin alpha 4, full
            insert sequence
          Length = 2876

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1287 tcagggagcaggtcacctgc 1268
to top
>ref|NM_007767.1| Mus musculus protocadherin alpha 6 (Pcdha6), mRNA
          Length = 5369

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1294 tcagggagcaggtcacctgc 1275
to top
>ref|NM_009957.1| Mus musculus protocadherin alpha 7 (Pcdha7), mRNA
          Length = 5215

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1168 tcagggagcaggtcacctgc 1149
to top
>ref|NM_198117.1| Mus musculus protocadherin alpha 2 (Pcdha2), mRNA
          Length = 5248

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1168 tcagggagcaggtcacctgc 1149
to top
>dbj|AK009656.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2310037B18 product:similar to CELL
           DIVISION PROTEIN FTSJ [Homo sapiens], full insert
           sequence
          Length = 1443

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 492 gtccacagccatgtccacaa 511
           ||||||||||||||||||||
Sbjct: 587 gtccacagccatgtccacaa 568
to top
>gb|AF537124.1| Hymenophyllum ferrugineum chloroplast small ribosomal protein
           4-like gene, and rps4-trnS intergenic spacer region,
           partial sequence
          Length = 938

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 601 tagataatattgtttttcag 620
           ||||||||||||||||||||
Sbjct: 241 tagataatattgtttttcag 260
to top
>gb|AY095130.1| Serpyllopsis caespitosa chloroplast small ribosomal protein 4-like
           gene and rps4-trnS intergenic spacer region, partial
           sequence
          Length = 978

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 601 tagataatattgtttttcag 620
           ||||||||||||||||||||
Sbjct: 241 tagataatattgtttttcag 260
to top
>gb|AY095125.1| Hymenophyllum secundum chloroplast small ribosomal protein 4-like
           gene and rps4-trnS intergenic spacer region, partial
           sequence
          Length = 977

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 601 tagataatattgtttttcag 620
           ||||||||||||||||||||
Sbjct: 241 tagataatattgtttttcag 260
to top
>dbj|AK077929.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
           enriched library, clone:6030447K18 product:hypothetical
           FtsJ cell division protein containing protein, full
           insert sequence
          Length = 1403

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 492 gtccacagccatgtccacaa 511
           ||||||||||||||||||||
Sbjct: 568 gtccacagccatgtccacaa 549
to top
>gb|AC162378.2| Mus musculus BAC clone RP24-82K1 from chromosome 16, complete sequence
          Length = 210112

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 144    atgacaagccaacagtaaga 163
              ||||||||||||||||||||
Sbjct: 161116 atgacaagccaacagtaaga 161135
to top
>dbj|AK048980.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:C230087K19 product:protocadherin
            alpha 4, full insert sequence
          Length = 2894

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1276 tcagggagcaggtcacctgc 1257
to top
>gb|AC087772.5|AC087772 Genomic Sequence for Mus musculus, clone RP23-326L17, complete sequence
          Length = 218905

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    tcagggagcaggtcacctgc 255
              ||||||||||||||||||||
Sbjct: 206362 tcagggagcaggtcacctgc 206343
to top
>dbj|AK082702.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:C230090I07
            product:unclassifiable, full insert sequence
          Length = 3040

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 418  gaagttagcttcccggagttggct 441
            ||||||||||||| ||||||||||
Sbjct: 1292 gaagttagcttccaggagttggct 1315
to top
>dbj|AK017300.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched
           library, clone:5430413B18 product:similar to CELL
           DIVISION PROTEIN FTSJ [Homo sapiens], full insert
           sequence
          Length = 1383

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 492 gtccacagccatgtccacaa 511
           ||||||||||||||||||||
Sbjct: 569 gtccacagccatgtccacaa 550
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>gb|AY013765.1| Mus musculus protocadherin alpha 7 mRNA, complete cds
          Length = 5215

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1168 tcagggagcaggtcacctgc 1149
to top
>gb|AY013764.1| Mus musculus protocadherin alpha 6 mRNA, complete cds
          Length = 5242

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1168 tcagggagcaggtcacctgc 1149
to top
>gb|AY013762.1| Mus musculus protocadherin alpha 4 mRNA, complete cds
          Length = 5245

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1168 tcagggagcaggtcacctgc 1149
to top
>gb|AY013760.1| Mus musculus protocadherin alpha 2 mRNA, complete cds
          Length = 5248

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1168 tcagggagcaggtcacctgc 1149
to top
>ref|NM_199503.1| Rattus norvegicus protocadherin alpha 1 (Pcdha1), mRNA
          Length = 5244

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1171 tcagggagcaggtcacctgc 1152
to top
>ref|NM_199486.2| Rattus norvegicus protocadherin alpha 11 (Pcdha11), mRNA
          Length = 5241

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1171 tcagggagcaggtcacctgc 1152
to top
>gb|AY573973.1| Rattus norvegicus protocadherin alpha 11 (Pcdha11) mRNA, complete cds
          Length = 5242

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1171 tcagggagcaggtcacctgc 1152
to top
>gb|AY573971.1| Rattus norvegicus protocadherin alpha 1 (Pcdha1) mRNA, complete cds
          Length = 5285

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1211 tcagggagcaggtcacctgc 1192
to top
>dbj|AB053225.2| Mus musculus GnT-IVa gene for N-acetylglucosaminyltransferase IVa,
            complete cds
          Length = 44184

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 418  gaagttagcttcccggagttggct 441
            ||||||||||||| ||||||||||
Sbjct: 2970 gaagttagcttccaggagttggct 2993
to top
>gb|AC027683.6| Homo sapiens chromosome 16 clone CTD-2357P14, complete sequence
          Length = 112945

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    catatatatatacacgcgca 44
             ||||||||||||||||||||
Sbjct: 60183 catatatatatacacgcgca 60202
to top
>gb|AC020968.3| Mus musculus chromosome 18 clone RP23-193O23, complete sequence
          Length = 199704

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    tcagggagcaggtcacctgc 255
              ||||||||||||||||||||
Sbjct: 192749 tcagggagcaggtcacctgc 192730



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    tcagggagcaggtcacctgc 255
              ||||||||||||||||||||
Sbjct: 186616 tcagggagcaggtcacctgc 186597



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    tcagggagcaggtcacctgc 255
              ||||||||||||||||||||
Sbjct: 180448 tcagggagcaggtcacctgc 180429



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    tcagggagcaggtcacctgc 255
              ||||||||||||||||||||
Sbjct: 165458 tcagggagcaggtcacctgc 165439



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    tcagggagcaggtcacctgc 255
              ||||||||||||||||||||
Sbjct: 152010 tcagggagcaggtcacctgc 151991
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>ref|XM_221949.3| PREDICTED: Rattus norvegicus FtsJ homolog 2 (E. coli) (predicted)
           (Ftsj2_predicted), mRNA
          Length = 7929

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 492 gtccacagccatgtccacaa 511
           ||||||||||||||||||||
Sbjct: 744 gtccacagccatgtccacaa 725
to top
>gb|AF291054.1|AF291054 Mus musculus 8-oxodGTPase protein (Mth1) gene, upstream promoter
            region
          Length = 3617

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 492  gtccacagccatgtccacaa 511
            ||||||||||||||||||||
Sbjct: 2568 gtccacagccatgtccacaa 2587
to top
>gb|AC020972.3|AC020972 Mus musculus chromosome 18 clone RP23-6P18, complete sequence
          Length = 218100

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 236    tcagggagcaggtcacctgc 255
              ||||||||||||||||||||
Sbjct: 213819 tcagggagcaggtcacctgc 213838



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 236    tcagggagcaggtcacctgc 255
              ||||||||||||||||||||
Sbjct: 198829 tcagggagcaggtcacctgc 198848



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 236    tcagggagcaggtcacctgc 255
              ||||||||||||||||||||
Sbjct: 192661 tcagggagcaggtcacctgc 192680



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 236    tcagggagcaggtcacctgc 255
              ||||||||||||||||||||
Sbjct: 186528 tcagggagcaggtcacctgc 186547
to top
>gb|AC008468.6|AC008468 Homo sapiens chromosome 5 clone CTC-365B8, complete sequence
          Length = 117096

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   tcagggagcaggtcacctgc 255
             ||||||||||||||||||||
Sbjct: 73645 tcagggagcaggtcacctgc 73664
to top
>dbj|AB113399.1| Rattus norvegicus rCNR gene for cadherin-related neuronal receptor,
             exon cluster
          Length = 249555

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   tcagggagcaggtcacctgc 255
             ||||||||||||||||||||
Sbjct: 67999 tcagggagcaggtcacctgc 67980



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1180 tcagggagcaggtcacctgc 1161
to top
>dbj|AB113394.1| Rattus norvegicus rCNRv11 mRNA for cadherin-related neuronal receptor
            11, complete cds
          Length = 5241

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1171 tcagggagcaggtcacctgc 1152
to top
>dbj|AB113384.1| Rattus norvegicus rCNRv01 mRNA for cadherin-related neuronal receptor
            1, complete cds
          Length = 5244

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1171 tcagggagcaggtcacctgc 1152
to top
>emb|BX005298.9| Mouse DNA sequence from clone RP23-261D24 on chromosome 2, complete
             sequence
          Length = 84664

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 537   agtcttgtaaattgctttca 556
             ||||||||||||||||||||
Sbjct: 39076 agtcttgtaaattgctttca 39057
to top
>dbj|AB002343.1| Homo sapiens mRNA for KIAA0345 gene, partial cds
          Length = 6387

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1892 tcagggagcaggtcacctgc 1873
to top
>dbj|AB114630.1| Mus musculus CNR gene for cadherin-related neuronal receptor,
            complete cds
          Length = 10521

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 5207 tcagggagcaggtcacctgc 5188
to top
>gb|AF152316.1|AF152316 Homo sapiens protocadherin alpha 8 (PCDH-alpha8) mRNA, complete cds
          Length = 5260

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1168 tcagggagcaggtcacctgc 1149
to top
>gb|AF152486.1|AF152486 Homo sapiens protocadherin alpha 8 short form protein (PCDH-alpha8)
            variable region sequence, complete cds
          Length = 2445

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1168 tcagggagcaggtcacctgc 1149
to top
>gb|AC006075.1|AC006075 Homo sapiens chromosome 16, BAC clone RPCI-11_192K18 , complete sequence
          Length = 169765

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     catatatatatacacgcgca 44
              ||||||||||||||||||||
Sbjct: 127070 catatatatatacacgcgca 127089
to top
>gb|AC132115.2| Mus musculus BAC clone RP24-146A13 from 1, complete sequence
          Length = 192659

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 15    atataggtggcatatatatataca 38
             ||||| ||||||||||||||||||
Sbjct: 17260 atatatgtggcatatatatataca 17237
to top
>gb|AC131670.5| Mus musculus BAC clone RP23-307I19 from 5, complete sequence
          Length = 197080

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   gtccacagccatgtccacaa 511
             ||||||||||||||||||||
Sbjct: 43643 gtccacagccatgtccacaa 43662
to top
>gb|AC140321.3| Mus musculus BAC clone RP23-402K6 from 1, complete sequence
          Length = 215225

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 418   gaagttagcttcccggagttggct 441
             ||||||||||||| ||||||||||
Sbjct: 60407 gaagttagcttccaggagttggct 60384
to top
>gb|AC158142.19| Mus musculus chromosome 15, clone RP24-342H15, complete sequence
          Length = 195319

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     ttttaattcagagttcatca 102
              ||||||||||||||||||||
Sbjct: 182026 ttttaattcagagttcatca 182045
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>emb|AJ007610.1|HSAJ7610 Homo sapiens mRNA for protocadherin alpha 9 (PCDHA9 gene)
          Length = 4020

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 2203 tcagggagcaggtcacctgc 2184
to top
>dbj|D86917.1| Mus musculus mRNA for CNR2, complete cds
          Length = 5369

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1294 tcagggagcaggtcacctgc 1275
to top
>dbj|D86916.1| Mus musculus mRNA for CNR1, complete cds
          Length = 5323

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1245 tcagggagcaggtcacctgc 1226
to top
>dbj|AB008179.1| Mus musculus CNR4 mRNA for Cadherin-related neural recepter 4,
            partial cds
          Length = 2707

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  tcagggagcaggtcacctgc 255
            ||||||||||||||||||||
Sbjct: 1061 tcagggagcaggtcacctgc 1042
to top
>dbj|AB026824.1| Ephydatia fluviatilis mRNA for sALK-1, complete cds
          Length = 1719

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 492 gtccacagccatgtccacaacagt 515
           |||||||||||||||||| |||||
Sbjct: 690 gtccacagccatgtccaccacagt 667


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,579,675
Number of Sequences: 3902068
Number of extensions: 14579675
Number of successful extensions: 289116
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 288599
Number of HSP's gapped (non-prelim): 507
length of query: 623
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 600
effective length of database: 17,143,297,704
effective search space: 10285978622400
effective search space used: 10285978622400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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