>ZN148_HUMAN (Q9UQR1) Zinc finger protein 148 (Zinc finger DNA-binding protein|
           89) (Transcription factor ZBP-89)
          Length = 794

 Score = 33.1 bits (74), Expect = 0.67
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 18/92 (19%)
 Frame = -3

Query: 580 VISSSVEPPDSQAIAYHGMDVSGSLENGKFVIGDDEADESEPEP------VSPISDWEDS 419
           V   +VE P S     H  D SG +   K V+    +  S  +P      +SP+S +E+S
Sbjct: 361 VAEYAVEMPHSSVGGSHLEDASGEIHPPKLVLKKINSKRSLKQPLEQNQTISPLSTYEES 420

Query: 418 DAER------------NGEGNKDIDEEEYLAQ 359
              +            + EGN DID+ + L +
Sbjct: 421 KVSKYAFELVDKQALLDSEGNADIDQVDNLQE 452

>AN32A_HUMAN (P39687) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member A (Potent heat-stable protein phosphatase 2A
           inhibitor I1PP2A) (Acidic nuclear phosphoprotein pp32)
           (Cerebellar leucine-rich acidic nuclear protein)
           (HLA-DR-associated prote
          Length = 249

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
 Frame = -3

Query: 562 EPPDSQAIAY-HGMDVSGSLENGKFVIGDDEADESEPEPVSPISDWEDSDAERNGE---- 398
           E PDS A  Y  G+D             +DE +E   E    + D ED D E  GE    
Sbjct: 154 EAPDSDAEGYVEGLDDEE----------EDEDEEEYDEDAQVVEDEEDEDEEEEGEEEDV 203

Query: 397 -GNKDIDEEEY 368
            G ++ DEE Y
Sbjct: 204 SGEEEEDEEGY 214

>SPT8_YEAST (P38915) Transcription factor SPT8|
          Length = 602

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
 Frame = -3

Query: 535 YHGMDVSGSLENGK----------FVIGDDEADESEPEPVSPISDWEDSDAERNGEGNKD 386
           Y  +DVSG++ +GK           + GD++ DE +     P+   + S    NGE NK+
Sbjct: 361 YSSVDVSGNVNSGKENENADDDMDSLFGDEDEDEKQDAGNEPVETGDGS----NGEENKE 416

Query: 385 IDEEEYL 365
              EE L
Sbjct: 417 QISEESL 423

>MP62_LYTPI (P91753) Mitotic apparatus protein p62|
          Length = 411

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 17/49 (34%), Positives = 29/49 (59%)
 Frame = -3

Query: 517 SGSLENGKFVIGDDEADESEPEPVSPISDWEDSDAERNGEGNKDIDEEE 371
           +GS+ENG  +  DD+ D+ E E    + D E+ +   +GE  ++ +EEE
Sbjct: 236 NGSVENGHAI--DDDEDDEEDEDYK-VGDEEEEEEATSGEEEEEDEEEE 281

>TRI26_RAT (P62603) Tripartite motif protein 26 (Zinc finger protein 173)|
          Length = 542

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -3

Query: 484 GDDEADESEPEPVSPISDWE-DSDAERNGEGNKDIDEEEYLAQFMCLL 344
           G++E ++ EP       DWE D + E  GE  ++ +EEE   Q  C++
Sbjct: 395 GEEEEEDEEPGYGDRYEDWETDEEDESLGEEEEEEEEEEEEVQESCMV 442

>ATL1G_ARATH (Q570X5) RING-H2 finger protein ATL1G|
          Length = 261

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 17/62 (27%), Positives = 35/62 (56%)
 Frame = -3

Query: 556 PDSQAIAYHGMDVSGSLENGKFVIGDDEADESEPEPVSPISDWEDSDAERNGEGNKDIDE 377
           P+S+ + + G  VS   E+   V     + + E +PV+ I+D  +   +++ EG K+++E
Sbjct: 186 PESEPVNHSG--VSSQPESQPVVNHRGVSSQPESQPVNHINDGHEQQCDQDVEGFKEMEE 243

Query: 376 EE 371
           +E
Sbjct: 244 DE 245

>CYCX_NITEU (Q50926) Probable tetraheme cytochrome c-type precursor|
          Length = 233

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
 Frame = -3

Query: 523 DVSGSLENGKFVI------GDDEADESEPEPVSPISDWEDSDAERNGEGNKDIDE 377
           D++ S+  GK V+       D+EADE E E      D  DS++  + + + + D+
Sbjct: 175 DLNASIAQGKLVLKPEDDGDDEEADEDEDEETEEADDSSDSESASSSDNSDNEDD 229

>NOP12_YARLI (Q6C2Q7) Nucleolar protein 12|
          Length = 509

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 21/80 (26%), Positives = 36/80 (45%)
 Frame = -3

Query: 598 DSGAKAVISSSVEPPDSQAIAYHGMDVSGSLENGKFVIGDDEADESEPEPVSPISDWEDS 419
           +SG  A+ ++S  P      A   +D     +  K  + D+E DE E E      + ++ 
Sbjct: 7   NSGLAALFANSSGPRQKPQRAGK-VDPVRDQQEDKMEVEDEEEDEEEDEEDEEEDEEDEE 65

Query: 418 DAERNGEGNKDIDEEEYLAQ 359
           D E   E + D D+EE + +
Sbjct: 66  DEEEKEEDDDDDDDEEEIEE 85

>YG3R_YEAST (P53288) Hypothetical 22.2 kDa protein in NSR1-TIF4631 intergenic|
           region
          Length = 203

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 20/68 (29%), Positives = 34/68 (50%)
 Frame = -3

Query: 574 SSSVEPPDSQAIAYHGMDVSGSLENGKFVIGDDEADESEPEPVSPISDWEDSDAERNGEG 395
           SSS    +S+      +D S  +     +  DDE ++SE E      + EDSD++ + + 
Sbjct: 94  SSSSSEEESEEEEEESLDSSFLVSASLSLSEDDEEEDSESEDED---EDEDSDSDSDSDS 150

Query: 394 NKDIDEEE 371
           + D DE+E
Sbjct: 151 DSDEDEDE 158

>CO8B_ONCMY (Q90X85) Complement component C8 beta chain precursor (Complement|
           component 8 beta subunit)
          Length = 587

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 328 GTTCHTRGT*IEPSTPPHQYPC 393
           G  CH +G  +EP +PP +Y C
Sbjct: 89  GEPCHVQGKEVEPCSPPSRYDC 110

>YAI1_ENCCU (Q8SU96) Hypothetical protein ECU10_1810|
          Length = 621

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 22/64 (34%), Positives = 32/64 (50%)
 Frame = -3

Query: 535 YHGMDVSGSLENGKFVIGDDEADESEPEPVSPISDWEDSDAERNGEGNKDIDEEEYLAQF 356
           Y  MD+ G L    F+ G D  DES  + V  + + E+++  R GE  +   EEE L   
Sbjct: 290 YKSMDIVGELFLRVFLEGKDINDESVNDTVCGVREREEAEKMR-GEEERRKKEEESLRNA 348

Query: 355 MCLL 344
           + LL
Sbjct: 349 LELL 352

>AN32A_RAT (P49911) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member A (Leucine-rich acidic nuclear protein)
          Length = 247

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
 Frame = -3

Query: 562 EPPDSQAIAYHGMDVSGSLENGKFVIGDDEADESEPEP---VSPISDWEDSDAERNGE-- 398
           E PDS        DV G +E+      DDE DE E E       + D E+ D E  GE  
Sbjct: 154 EAPDS--------DVEGYVED------DDEEDEDEEEYDEYAQLVEDEEEEDEEEEGEEE 199

Query: 397 ---GNKDIDEEEY 368
              G ++ DEE Y
Sbjct: 200 DVSGEEEEDEEGY 212

>AN32A_MOUSE (O35381) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member A (Potent heat-stable protein phosphatase 2A
           inhibitor I1PP2A) (Acidic nuclear phosphoprotein pp32)
           (Cerebellar leucine-rich acidic nuclear protein)
          Length = 247

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
 Frame = -3

Query: 562 EPPDSQAIAYHGMDVSGSLENGKFVIGDDEADESEPEP---VSPISDWEDSDAERNGE-- 398
           E PDS        DV G +E+      DDE DE E E       + D E+ D E  GE  
Sbjct: 154 EAPDS--------DVEGYVED------DDEEDEDEEEYDEYAQLVEDEEEEDEEEEGEEE 199

Query: 397 ---GNKDIDEEEY 368
              G ++ DEE Y
Sbjct: 200 DVSGEEEEDEEGY 212

>RGP1_DROME (Q9VIW3) Ran GTPase-activating protein (RanGAP) (Protein|
           segregation distorter)
          Length = 596

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 19/79 (24%), Positives = 40/79 (50%)
 Frame = -3

Query: 607 AFVDSGAKAVISSSVEPPDSQAIAYHGMDVSGSLENGKFVIGDDEADESEPEPVSPISDW 428
           +F + G++ +IS   + P + A+          LE+ ++     +AD  E E V   ++ 
Sbjct: 328 SFGEEGSEKIISEMSKLPTAAALQPFQHQEEEDLED-EYQADKQDADYEEEEEVHEHAND 386

Query: 427 EDSDAERNGEGNKDIDEEE 371
              +A+ + EG++D +E+E
Sbjct: 387 TTEEADEDSEGDEDDEEDE 405

>PDI_WHEAT (P52589) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)|
          Length = 515

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
 Frame = -3

Query: 616 LVKAFVDSGAKAVI--SSSVEPPDSQAIAYHGMDVSGSLENGKFVIGDDEADESE----- 458
           L+K F  +  KA++  + S  P +S   AY+G     S ++ KF+IGD EA +       
Sbjct: 267 LLKYFQSNAPKAMLFLNFSTGPFESFKSAYYGAVEEFSGKDVKFLIGDIEASQGAFQYNG 326

Query: 457 -PEPVSPISDWEDSDAER 407
             E  +P+   +DSD+++
Sbjct: 327 LKEDQAPLILIQDSDSKK 344

>AATF_DROME (Q9VM95) Protein AATF-like|
          Length = 488

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
 Frame = -3

Query: 598 DSGAKAVISSSVEPPDSQAIAYHGMDVSGSLENGKFVIGDDEA--DESEPEPVSPISDWE 425
           DS  +     S    +S+ I  +  D     E G F   DDE   D+SE E  S  S+ +
Sbjct: 123 DSEEETAAGHSESGEESEEIESNLTDFKKKFEAGDFKYDDDEEEDDDSEEEDHSQESEGD 182

Query: 424 DSDAE 410
           D D+E
Sbjct: 183 DDDSE 187

>MCE1_MOUSE (O55236) mRNA capping enzyme (HCE) (MCE1) [Includes: Polynucleotide|
           5'-triphosphatase (EC 3.1.3.33) (mRNA 5'-triphosphatase)
           (TPase); mRNA guanylyltransferase (EC 2.7.7.50)
           (GTP--RNA guanylyltransferase) (GTase)]
          Length = 597

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
 Frame = -3

Query: 475 EADESEPEPVSPISDWEDSDAERNGEGNKDIDEEEYLAQFMCLLYDKL-----FREGVTV 311
           + +E+ P PV P   +ED D E   E  K   E    A F     ++L     F EG+TV
Sbjct: 179 DIEEAPPPPVLPDWCFEDEDEEDEDEDGKKDSEPGSSASFSKRRKERLKLGAIFLEGITV 238

Query: 310 DTALQQALRAHPRL---KYSCH 254
               Q  +   P+L   +  CH
Sbjct: 239 KGVTQ--VTTQPKLGEVQQKCH 258

>ZBT17_CHICK (Q90625) Zinc finger and BTB domain-containing protein 17 (Zinc|
           finger protein 151) (Zinc finger protein Z13) (Fragment)
          Length = 706

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 17/60 (28%), Positives = 33/60 (55%)
 Frame = -3

Query: 553 DSQAIAYHGMDVSGSLENGKFVIGDDEADESEPEPVSPISDWEDSDAERNGEGNKDIDEE 374
           D+ +    GM++ G  E G+ ++ +DE +   P+   P S+ ++ +AE N  G+ D  +E
Sbjct: 121 DAPSTEARGMELEGKEEEGEAMV-EDEEEAKIPKAAQPKSESKE-NAEDNESGSTDSGQE 178

>AP3B1_CANFA (Q7YRF1) AP-3 complex subunit beta-1 (Adapter-related protein|
           complex 3 beta-1 subunit) (Beta3A-adaptin) (Adaptor
           protein complex AP-3 beta-1 subunit) (Clathrin assembly
           protein complex 3 beta-1 large chain)
          Length = 1091

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 9/89 (10%)
 Frame = -3

Query: 610 KAFVDSGAKAVISSSVEPPDSQAIAYHGMDVSGSLENGKFVIGDDEADESE--------- 458
           KA  ++ A+   S S E  DS   +      SGS    +   GD   D SE         
Sbjct: 666 KAKKENPARKFYSDSEEEEDSSDSSSDSESESGSASGEQDEEGDSSEDSSEDSSSEHRSD 725

Query: 457 PEPVSPISDWEDSDAERNGEGNKDIDEEE 371
            E VS + D   +      +G  D ++EE
Sbjct: 726 SESVSEVGDKRTAKRNSKSKGKSDSEDEE 754

>AN32C_HUMAN (O43423) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member C (Tumorigenic protein pp32r1)
          Length = 234

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = -3

Query: 484 GDDEADESEPEPVSPISDWEDSDAERNGEGNKDIDEEE 371
           G++E +E E E VS   D ED +   +GE + + DEEE
Sbjct: 187 GEEEEEEGEEEDVSG-GDEEDEEGYNDGEVDGEEDEEE 223

>DAXX_CERAE (O18805) Death domain-associated protein 6 (Daxx)|
          Length = 736

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -3

Query: 481 DDEADESEPEPVSPISDW-EDSDAERNGEGNKDIDEEE 371
           D+E +E E E     +D+ E+ D E+  EG +D +EEE
Sbjct: 444 DEEEEEEEEEEEEEATDFEEEEDLEQMQEGQEDDEEEE 481

>YTDC1_RAT (Q9QY02) YTH domain-containing protein 1 (Putative splicing factor|
           YT521) (RA301-binding protein)
          Length = 738

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = -3

Query: 601 VDSGAKAVISSSVEPPDSQAIAY-HGMDVSGSLENGKFVIGDDEADESEPEPVSPISDWE 425
           VD  A     SS E  +S+     H    S S E G     ++E  E + E    + +  
Sbjct: 159 VDRRASRSSQSSKEEGNSEEYGSDHETGSSASSEQGNNTENEEEGGEEDVEEDEEVDEDG 218

Query: 424 DSDAERNGEGNKDIDEEE 371
           D D E + +  ++ DEEE
Sbjct: 219 DDDEEVDEDAEEEEDEEE 236

>DRS1_DEBHA (Q6BTL5) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)|
          Length = 771

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -3

Query: 514 GSLEN--GKFVIGDDEADESEPEPVSPISDWEDSDAERNGEGNKDIDE 377
           G L N  G  V  D++ DE E E V  + + +D D E   EG+ D DE
Sbjct: 134 GGLANLAGSDVKVDEKNDEVESEEVEEVEE-DDEDEENEQEGDDDDDE 180

>SAS10_YEAST (Q12136) Something about silencing protein 10 (U3 small nucleolar|
           RNA-associated protein 3) (U3 snoRNA-associated protein
           11)
          Length = 610

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 9/50 (18%)
 Frame = -3

Query: 493 FVIGDDEADESEP---------EPVSPISDWEDSDAERNGEGNKDIDEEE 371
           F + + +  ESE          + ++ + + EDSDAE  G+  ++IDEEE
Sbjct: 306 FDVNEGDGSESEETANIEAFNEKKLNELQNSEDSDAEDGGKQKQEIDEEE 355

>TBB_PSEAM (Q91240) Tubulin beta chain (Beta tubulin)|
          Length = 445

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -3

Query: 475 EADESEPEPVSPISDWEDSDAERNGEGNKDIDEE 374
           EA+ +  + VS    ++D+ AE  GEG ++ DEE
Sbjct: 410 EAESNMNDLVSEYQQYQDATAEEEGEGEEEGDEE 443

>SIL1_CYLFU (Q9SE35) Silaffin 1 precursor (natSil-1) [Contains: Silaffin-1B;|
           Silaffin-1A2; Silaffin-1A1]
          Length = 265

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = -3

Query: 601 VDSGAKAVISSSVEPPDSQAIAYHGMDVSG-SLENGKFVIGDDEADESEPEPVSPIS 434
           VD+ +  V  SSVE  D    +   +DVSG SLE+      DD +++SE E +  +S
Sbjct: 57  VDAASSDVSGSSVESVDVSGSSLESVDVSGSSLES-----VDDSSEDSEEEELRILS 108

>MYT1L_RAT (P70475) Myelin transcription factor 1-like protein (MyT1L protein)|
           (Neural zinc finger factor 1) (NZF-1)
          Length = 1187

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = -3

Query: 481 DDEADESEPEPVSPISDWEDSDAERNGEGNKDIDEEE 371
           DD+ DE + E    I + +D D E + +G+ D++EEE
Sbjct: 120 DDDEDEVDREDEEEIEEEDDEDDEDDDDGD-DVEEEE 155

>PISD_HUMAN (Q9UG56) Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65)|
           [Contains: Phosphatidylserine decarboxylase alpha chain;
           Phosphatidylserine decarboxylase beta chain]
          Length = 408

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 254 MAAVLQPRMCAECL-LKSSVHCDSLTEQLVIQEAHKLSQVLLLI 382
           + + L PRMC E L    +  CDS   QLV +E ++L   ++ +
Sbjct: 214 LESFLGPRMCTEDLPFPPAASCDSFKNQLVTREGNELYHCVIYL 257

>SSRA_PONPY (Q5R4X4) Translocon-associated protein alpha subunit precursor|
           (TRAP-alpha) (Signal sequence receptor alpha subunit)
           (SSR-alpha)
          Length = 291

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = -3

Query: 559 PPDSQAIAYHGMDVSGSLENGKFVIGDDEADESEPEPVSPISDWEDSDAERNGEGNKDID 380
           P  S A+A    +   ++E+      DDEA+  E EP   + D E+ D     E +   D
Sbjct: 25  PRGSLAVAQDLTEDEETVEDSIIEDEDDEAEVEEDEPTDLVEDKEEEDVSGEPEASPSAD 84

>CH60_PLAFG (P34940) Chaperonin CPN60, mitochondrial precursor|
          Length = 700

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = -3

Query: 586 KAVISSSVEPPDSQAIAYHGMDVSGSLENGKFVIGDDEADESEPEPVSPISD--WEDSDA 413
           K ++ SS+  P+   ++ H       L + +    DDE DE + +    + D  ++D D 
Sbjct: 617 KGILDSSINSPNY--LSKHRRTYKHKLHDDEDTDEDDEEDEDDEDDEDDLDDDDYDDED- 673

Query: 412 ERNGEGNKDIDEEE 371
           E + E  +D D+E+
Sbjct: 674 EEDEEDEEDEDDED 687


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,227,258
Number of Sequences: 219361
Number of extensions: 1851256
Number of successful extensions: 6078
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5970
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)