ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6h18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK059875.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 8e-74
2dbj|AK068786.1| Oryza sativa (japonica cultivar-group) cDNA clon... 278 2e-71
3ref|NM_190751.1| Oryza sativa (japonica cultivar-group), predic... 214 2e-52
4gb|AY110689.1| Zea mays CL11215_-2 mRNA sequence 200 3e-48
5gb|BT017198.1| Zea mays clone EL01N0371F02.c mRNA sequence 167 5e-38
6gb|AY108247.1| Zea mays PCO100475 mRNA sequence 167 5e-38
7dbj|AK104190.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 3e-24
8dbj|AK104012.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 3e-24
9dbj|AK073599.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 3e-24
10gb|AY375336.1| Gossypium barbadense fiber NTGP1-related protein ... 113 6e-22
11gb|AY605930.1| Hevea brasiliensis putative SNARE protein mRNA, c... 109 1e-20
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
13dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
14gb|U64922.1|NTU64922 Nicotiana tabacum geranylgeranylated protei... 96 1e-16
15ref|NM_125191.3| Arabidopsis thaliana YKT61 AT5G58060 (YKT61) mR... 70 8e-09
16gb|AY133669.1| Arabidopsis thaliana AT5g58060/k21l19_40 mRNA, co... 70 8e-09
17gb|AF385703.1|AF385703 Arabidopsis thaliana AT5g58060/k21l19_40 ... 70 8e-09
18gb|AF325040.2|AF325040 Arabidopsis thaliana AT5g58060 (AT5g58060... 70 8e-09
19emb|BX833552.1|CNS0A1UB Arabidopsis thaliana Full-length cDNA Co... 70 8e-09
20emb|BX832334.1|CNS09ZUE Arabidopsis thaliana Full-length cDNA Co... 70 8e-09
21emb|BX829912.1|CNS0A01W Arabidopsis thaliana Full-length cDNA Co... 70 8e-09
22gb|U64918.1|ATU64918 Arabidopsis thaliana geranylgeranylated pro... 70 8e-09
23dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
24ref|NM_125203.1| Arabidopsis thaliana ATYKT62 AT5G58180 (ATYKT62... 54 5e-04
25gb|DQ447089.1| Arabidopsis thaliana clone pENTR221-At5g58180 SNA... 54 5e-04
26dbj|AB024029.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 52 0.002
27dbj|AB019228.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 52 0.002
28ref|NM_125192.3| Arabidopsis thaliana transporter AT5G58070 mRNA... 50 0.008
29gb|AF475112.1| Triticum aestivum geranylgeranylated protein ATGP... 50 0.008
30gb|AC129563.14| Mus musculus chromosome 15, clone RP23-223M20, c... 44 0.49
31gb|AC123656.9| Mus musculus chromosome 15, clone RP23-188M21, co... 42 1.9
32ref|XM_707538.1| Candida albicans SC5314 histidinol-phosphate am... 42 1.9
33ref|XM_707688.1| Candida albicans SC5314 histidinol-phosphate am... 42 1.9
34gb|AC139360.8| Mus musculus chromosome 3, clone RP23-324F4, comp... 42 1.9
35gb|AC126460.4| Mus musculus BAC clone RP23-187E3 from 3, complet... 42 1.9
36gb|AC134909.4| Mus musculus chromosome 3 clone RP23-402O2, compl... 42 1.9
37gb|AC142454.4| Mus musculus BAC clone RP23-313G1 from chromosome... 42 1.9
38emb|BX830861.1|CNS0A0TJ Arabidopsis thaliana Full-length cDNA Co... 42 1.9
39gb|AC121114.10| Mus musculus chromosome 15, clone RP23-63M19, co... 42 1.9
40gb|AC152950.2| Mus musculus 10 BAC RP23-138J18 (Roswell Park Can... 42 1.9
41gb|AY904240.1| Pyrococcus sp. V232 deoxypusine synthase and prep... 40 7.6
42gb|AY904239.1| Pyrococcus sp. V231 deoxypusine synthase and prep... 40 7.6
43gb|AY904238.1| Pyrococcus sp. V222 deoxypusine synthase and prep... 40 7.6
44gb|AY904237.1| Pyrococcus sp. V221 deoxypusine synthase and prep... 40 7.6
45gb|AY904236.1| Pyrococcus sp. V212 deoxypusine synthase and prep... 40 7.6
46gb|AY904235.1| Pyrococcus sp. V211 deoxypusine synthase and prep... 40 7.6
47gb|AY904234.1| Pyrococcus sp. V73 deoxypusine synthase and preph... 40 7.6
48gb|AY904233.1| Pyrococcus sp. V72 deoxypusine synthase and preph... 40 7.6
49gb|AY904231.1| Pyrococcus sp. V62 deoxypusine synthase and preph... 40 7.6
50gb|AY904230.1| Pyrococcus sp. V61 deoxypusine synthase and preph... 40 7.6
51gb|AY904229.1| Pyrococcus sp. VB113 deoxypusine synthase and pre... 40 7.6
52gb|AY904228.1| Pyrococcus sp. VB112 deoxypusine synthase and pre... 40 7.6
53gb|AY904227.1| Pyrococcus sp. VB93 deoxypusine synthase and prep... 40 7.6
54gb|AY904226.1| Pyrococcus sp. VB86 deoxypusine synthase and prep... 40 7.6
55gb|AY904225.1| Pyrococcus sp. VB85 deoxypusine synthase and prep... 40 7.6
56gb|AY904224.1| Pyrococcus sp. VB83 deoxypusine synthase and prep... 40 7.6
57gb|AY904223.1| Pyrococcus sp. VB82 deoxypusine synthase and prep... 40 7.6
58gb|AY904222.1| Pyrococcus sp. VB81 deoxypusine synthase and prep... 40 7.6
59gb|AE000659.1|HUAE000659 Homo sapiens T-cell receptor alpha delt... 40 7.6
60gb|AC102090.14| Mus musculus chromosome 1, clone RP23-7I3, compl... 40 7.6
61gb|AC125216.3| Mus musculus BAC clone RP23-109J14 from 1, comple... 40 7.6
62gb|AC122027.1| Mus musculus BAC clone RP24-390L20 from 1, comple... 40 7.6
63emb|Z99108.2|BSUB0005 Bacillus subtilis complete genome (section... 40 7.6
64emb|BX957230.5| Zebrafish DNA sequence from clone DKEY-106I11 in... 40 7.6
65gb|AC159939.3| Loxodonta africana clone VMRC15-235M14, complete ... 40 7.6
66emb|BX663616.13| Zebrafish DNA sequence from clone DKEY-287H22 i... 40 7.6
67gb|AE008402.1|AE008402 Streptococcus pneumoniae R6 section 18 of... 40 7.6
68ref|XM_342829.2| PREDICTED: Rattus norvegicus F-box only protein... 40 7.6
69gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome 40 7.6
70emb|CR318588.10| Zebrafish DNA sequence from clone DKEYP-1H4 in ... 40 7.6
71emb|AL732455.6| Zebrafish DNA sequence from clone CH211-225J17 i... 40 7.6
72gb|AF006075.1|AF006075 Bacillus subtilis acetoin dehydrogenase e... 40 7.6
73emb|AL590446.1|CNS07EGD chromosome VI of strain GB-M1 of Encepha... 40 7.6
74gb|AC140230.3| Mus musculus BAC clone RP24-493E4 from 14, comple... 40 7.6
75ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus ... 40 7.6
76emb|AL844198.7| Mouse DNA sequence from clone RP23-438P13 on chr... 40 7.6
77dbj|D78509.1| Bacillus subtilis YfjG-YfjR genes, complete cds 40 7.6
78emb|AL592482.6| Mouse DNA sequence from clone RP23-220K2 on chro... 40 7.6 
>dbj|AK059875.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F07, full
           insert sequence
          Length = 1064

 Score =  285 bits (144), Expect = 8e-74
 Identities = 207/228 (90%)
 Strand = Plus / Minus

                                                                       
Query: 328 caaacttcagagtatagtacaacaactgtttgttttcttcgcctgcttgtagaacatctg 387
           ||||||||||||||||||||| ||   |||||||||||| ||||||||||||||||||||
Sbjct: 742 caaacttcagagtatagtacagcattggtttgttttctttgcctgcttgtagaacatctg 683

                                                                       
Query: 388 tgaagcagcactgaggtctgagcttttttcaaccaagctatccaacctctctcctctttg 447
           |||||||||||| |||||||| || || ||||||||||||||||| || || ||||||||
Sbjct: 682 tgaagcagcactcaggtctgaactcttctcaaccaagctatccaatctttcccctctttg 623

                                                                       
Query: 448 aagaacattctctatagttttatgcaggataatttttgtttcatccaagtccctctggat 507
            || ||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 622 gagcacactctcaatagttttatgtaggataatttttgtttcatccaagtccctctggat 563

                                                           
Query: 508 ttttgttaacttgtcagcctctgcaggatcctgaaattttgtcaaagc 555
           |||  |||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 562 tttcattaacttgtcagcctctgcagggtcctgaaactttgtcaaagc 515
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>dbj|AK068786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158L24, full
           insert sequence
          Length = 1216

 Score =  278 bits (140), Expect = 2e-71
 Identities = 206/228 (90%)
 Strand = Plus / Minus

                                                                       
Query: 328 caaacttcagagtatagtacaacaactgtttgttttcttcgcctgcttgtagaacatctg 387
           ||||||||||||||||||||| ||   |||||||||||| ||||||||||||||||||||
Sbjct: 766 caaacttcagagtatagtacagcattggtttgttttctttgcctgcttgtagaacatctg 707

                                                                       
Query: 388 tgaagcagcactgaggtctgagcttttttcaaccaagctatccaacctctctcctctttg 447
           |||||||||||| |||||||| || || ||||||||||||||||| || || ||||||||
Sbjct: 706 tgaagcagcactcaggtctgaactcttctcaaccaagctatccaatctttcccctctttg 647

                                                                       
Query: 448 aagaacattctctatagttttatgcaggataatttttgtttcatccaagtccctctggat 507
            || ||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 646 gagcacactctcaatagttttatgtaggataatttttgtttcatccaagtccctctggat 587

                                                           
Query: 508 ttttgttaacttgtcagcctctgcaggatcctgaaattttgtcaaagc 555
           |||  |||||||||||||||||||||| |||| ||| |||||||||||
Sbjct: 586 tttcattaacttgtcagcctctgcagggtcctaaaactttgtcaaagc 539
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>ref|NM_190751.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 711

 Score =  214 bits (108), Expect = 2e-52
 Identities = 156/172 (90%)
 Strand = Plus / Minus

                                                                       
Query: 384 tctgtgaagcagcactgaggtctgagcttttttcaaccaagctatccaacctctctcctc 443
           |||||||||||||||| |||||||| || || ||||||||||||||||| || || ||||
Sbjct: 601 tctgtgaagcagcactcaggtctgaactcttctcaaccaagctatccaatctttcccctc 542

                                                                       
Query: 444 tttgaagaacattctctatagttttatgcaggataatttttgtttcatccaagtccctct 503
           |||| || ||| |||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 541 tttggagcacactctcaatagttttatgtaggataatttttgtttcatccaagtccctct 482

                                                               
Query: 504 ggatttttgttaacttgtcagcctctgcaggatcctgaaattttgtcaaagc 555
           |||||||  |||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 481 ggattttcattaacttgtcagcctctgcagggtcctgaaactttgtcaaagc 430
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>gb|AY110689.1| Zea mays CL11215_-2 mRNA sequence
          Length = 563

 Score =  200 bits (101), Expect = 3e-48
 Identities = 177/204 (86%)
 Strand = Plus / Plus

                                                                       
Query: 355 gtttgttttcttcgcctgcttgtagaacatctgtgaagcagcactgaggtctgagctttt 414
           |||||| ||||| |||||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 283 gtttgtcttctttgcctgcttgtagaacatctgagaagcagcactcagatcagagctttt 342

                                                                       
Query: 415 ttcaaccaagctatccaacctctctcctctttgaagaacattctctatagttttatgcag 474
            ||||||||||||||||| |||||||||||   ||| ||| |||| ||||||||||| ||
Sbjct: 343 ctcaaccaagctatccaatctctctcctctggcaaggacactctcaatagttttatgtag 402

                                                                       
Query: 475 gataatttttgtttcatccaagtccctctggatttttgttaacttgtcagcctctgcagg 534
           |||||     |||||||||||||||||||| |||||  |||| |||||||| || |||||
Sbjct: 403 gataannnnngtttcatccaagtccctctgaattttcattaatttgtcagcttccgcagg 462

                                   
Query: 535 atcctgaaattttgtcaaagcgtc 558
           |||||||||||||||||| |||||
Sbjct: 463 atcctgaaattttgtcaaggcgtc 486
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>gb|BT017198.1| Zea mays clone EL01N0371F02.c mRNA sequence
          Length = 937

 Score =  167 bits (84), Expect = 5e-38
 Identities = 174/204 (85%)
 Strand = Plus / Minus

                                                                       
Query: 355 gtttgttttcttcgcctgcttgtagaacatctgtgaagcagcactgaggtctgagctttt 414
           |||||| ||||| |||||||||||||||||||| ||||||||||| || || || |||||
Sbjct: 664 gtttgtcttctttgcctgcttgtagaacatctgagaagcagcacttagatcagaactttt 605

                                                                       
Query: 415 ttcaaccaagctatccaacctctctcctctttgaagaacattctctatagttttatgcag 474
            ||||||||||||||||| |||||||||||    || ||| | || ||||||||||| ||
Sbjct: 604 ctcaaccaagctatccaatctctctcctctggccaggacactatcaatagttttatgaag 545

                                                                       
Query: 475 gataatttttgtttcatccaagtccctctggatttttgttaacttgtcagcctctgcagg 534
            ||||||||||||||||||||||||||||| |||||  |||  |||||||| || |||||
Sbjct: 544 aataatttttgtttcatccaagtccctctgaattttcattagtttgtcagcttccgcagg 485

                                   
Query: 535 atcctgaaattttgtcaaagcgtc 558
            ||||||||| ||| ||| |||||
Sbjct: 484 gtcctgaaatcttgccaaggcgtc 461
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>gb|AY108247.1| Zea mays PCO100475 mRNA sequence
          Length = 1098

 Score =  167 bits (84), Expect = 5e-38
 Identities = 174/204 (85%)
 Strand = Plus / Minus

                                                                       
Query: 355 gtttgttttcttcgcctgcttgtagaacatctgtgaagcagcactgaggtctgagctttt 414
           |||||| ||||| |||||||||||||||||||| ||||||||||| || || || |||||
Sbjct: 692 gtttgtcttctttgcctgcttgtagaacatctgagaagcagcacttagatcagaactttt 633

                                                                       
Query: 415 ttcaaccaagctatccaacctctctcctctttgaagaacattctctatagttttatgcag 474
            ||||||||||||||||| |||||||||||    || ||| | || ||||||||||| ||
Sbjct: 632 ctcaaccaagctatccaatctctctcctctggccaggacactatcaatagttttatgaag 573

                                                                       
Query: 475 gataatttttgtttcatccaagtccctctggatttttgttaacttgtcagcctctgcagg 534
            ||||||||||||||||||||||||||||| |||||  |||  |||||||| || |||||
Sbjct: 572 aataatttttgtttcatccaagtccctctgaattttcattagtttgtcagcttccgcagg 513

                                   
Query: 535 atcctgaaattttgtcaaagcgtc 558
            ||||||||| ||| ||| |||||
Sbjct: 512 gtcctgaaatcttgccaaggcgtc 489
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>dbj|AK104190.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C07, full
           insert sequence
          Length = 1006

 Score =  121 bits (61), Expect = 3e-24
 Identities = 172/209 (82%)
 Strand = Plus / Minus

                                                                       
Query: 344 gtacaacaactgtttgttttcttcgcctgcttgtagaacatctgtgaagcagcactgagg 403
           |||||||||  ||| |||||||| |||||||||||||||||||||||||||||||| || 
Sbjct: 755 gtacaacaagagttggttttcttggcctgcttgtagaacatctgtgaagcagcacttaga 696

                                                                       
Query: 404 tctgagcttttttcaaccaagctatccaacctctctcctctttgaagaacattctctata 463
           ||||| || || || || | ||||||||| || || |||||   ||| ||| | || || 
Sbjct: 695 tctgaactcttctccactaggctatccaatctttcacctctagaaagtacactatcgatg 636

                                                                       
Query: 464 gttttatgcaggataatttttgtttcatccaagtccctctggatttttgttaacttgtca 523
           || || || || ||||| || ||||||||||| |||||||| |||||    |||||||||
Sbjct: 635 gtcttgtgaagaataatcttagtttcatccaaatccctctgaattttcagcaacttgtca 576

                                        
Query: 524 gcctctgcaggatcctgaaattttgtcaa 552
           |||||||||||||||||  ||||||||||
Sbjct: 575 gcctctgcaggatcctggtattttgtcaa 547
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>dbj|AK104012.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-D09, full
           insert sequence
          Length = 1009

 Score =  121 bits (61), Expect = 3e-24
 Identities = 172/209 (82%)
 Strand = Plus / Minus

                                                                       
Query: 344 gtacaacaactgtttgttttcttcgcctgcttgtagaacatctgtgaagcagcactgagg 403
           |||||||||  ||| |||||||| |||||||||||||||||||||||||||||||| || 
Sbjct: 758 gtacaacaagagttggttttcttggcctgcttgtagaacatctgtgaagcagcacttaga 699

                                                                       
Query: 404 tctgagcttttttcaaccaagctatccaacctctctcctctttgaagaacattctctata 463
           ||||| || || || || | ||||||||| || || |||||   ||| ||| | || || 
Sbjct: 698 tctgaactcttctccactaggctatccaatctttcacctctagaaagtacactatcgatg 639

                                                                       
Query: 464 gttttatgcaggataatttttgtttcatccaagtccctctggatttttgttaacttgtca 523
           || || || || ||||| || ||||||||||| |||||||| |||||    |||||||||
Sbjct: 638 gtcttgtgaagaataatcttagtttcatccaaatccctctgaattttcagcaacttgtca 579

                                        
Query: 524 gcctctgcaggatcctgaaattttgtcaa 552
           |||||||||||||||||  ||||||||||
Sbjct: 578 gcctctgcaggatcctggtattttgtcaa 550
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>dbj|AK073599.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050J23, full
           insert sequence
          Length = 1060

 Score =  121 bits (61), Expect = 3e-24
 Identities = 172/209 (82%)
 Strand = Plus / Minus

                                                                       
Query: 344 gtacaacaactgtttgttttcttcgcctgcttgtagaacatctgtgaagcagcactgagg 403
           |||||||||  ||| |||||||| |||||||||||||||||||||||||||||||| || 
Sbjct: 791 gtacaacaagagttggttttcttggcctgcttgtagaacatctgtgaagcagcacttaga 732

                                                                       
Query: 404 tctgagcttttttcaaccaagctatccaacctctctcctctttgaagaacattctctata 463
           ||||| || || || || | ||||||||| || || |||||   ||| ||| | || || 
Sbjct: 731 tctgaactcttctccactaggctatccaatctttcacctctagaaagtacactatcgatg 672

                                                                       
Query: 464 gttttatgcaggataatttttgtttcatccaagtccctctggatttttgttaacttgtca 523
           || || || || ||||| || ||||||||||| |||||||| |||||    |||||||||
Sbjct: 671 gtcttgtgaagaataatcttagtttcatccaaatccctctgaattttcagcaacttgtca 612

                                        
Query: 524 gcctctgcaggatcctgaaattttgtcaa 552
           |||||||||||||||||  ||||||||||
Sbjct: 611 gcctctgcaggatcctggtattttgtcaa 583
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>gb|AY375336.1| Gossypium barbadense fiber NTGP1-related protein mRNA, complete cds
          Length = 1077

 Score =  113 bits (57), Expect = 6e-22
 Identities = 162/197 (82%)
 Strand = Plus / Minus

                                                                       
Query: 359 gttttcttcgcctgcttgtagaacatctgtgaagcagcactgaggtctgagcttttttca 418
           |||||||| ||||||||| |||||||||| || |||||||| || ||||| || || |||
Sbjct: 707 gttttcttagcctgcttggagaacatctgagacgcagcactcagatctgaactcttctca 648

                                                                       
Query: 419 accaagctatccaacctctctcctctttgaagaacattctctatagttttatgcaggata 478
           || || || |||| |||||| |||| |  ||| ||| | || ||||||||||| ||||| 
Sbjct: 647 actaaactgtccagcctctcacctcgtgcaagcacactatcaatagttttatgaaggatg 588

                                                                       
Query: 479 atttttgtttcatccaagtccctctggatttttgttaacttgtcagcctctgcaggatcc 538
           ||||| ||||||||||| |||||||| |||||   ||| || || ||||||||||| |||
Sbjct: 587 attttagtttcatccaactccctctgaattttcaataatttatccgcctctgcagggtcc 528

                            
Query: 539 tgaaattttgtcaaagc 555
           ||||||||  |||||||
Sbjct: 527 tgaaatttgatcaaagc 511
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>gb|AY605930.1| Hevea brasiliensis putative SNARE protein mRNA, complete cds
          Length = 1070

 Score =  109 bits (55), Expect = 1e-20
 Identities = 148/179 (82%)
 Strand = Plus / Minus

                                                                       
Query: 359 gttttcttcgcctgcttgtagaacatctgtgaagcagcactgaggtctgagcttttttca 418
           ||||| || |||||||||||||||||||||||||||||||| || ||||| || || |||
Sbjct: 668 gttttttttgcctgcttgtagaacatctgtgaagcagcactcagatctgaactcttctca 609

                                                                       
Query: 419 accaagctatccaacctctctcctctttgaagaacattctctatagttttatgcaggata 478
           || | ||| ||||   |||| |||| |  ||| ||| | || ||||||||||| ||||||
Sbjct: 608 actaggctgtccagtttctcacctcgtgcaagcacactgtcgatagttttatgaaggata 549

                                                                      
Query: 479 atttttgtttcatccaagtccctctggatttttgttaacttgtcagcctctgcaggatc 537
           |||||||| |||||||| |||||||| |||||    |||||||| || |||||||||||
Sbjct: 548 atttttgtctcatccaactccctctgaattttcaacaacttgtctgcttctgcaggatc 490
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  109 bits (55), Expect = 1e-20
 Identities = 64/67 (95%)
 Strand = Plus / Minus

                                                                            
Query: 473      aggataatttttgtttcatccaagtccctctggatttttgttaacttgtcagcctctgca 532
                ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 37510425 aggataatttttgtttcatccaagtccctctggattttcattaacttgtcagcctctgca 37510366

                       
Query: 533      ggatcct 539
                || ||||
Sbjct: 37510365 gggtcct 37510359



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                            
Query: 385      ctgtgaagcagcactgaggtctgagcttttttcaaccaagctatccaacctctctcctct 444
                ||||||||||||||| |||||||| || || ||||||||||||||||| || || |||||
Sbjct: 37510745 ctgtgaagcagcactcaggtctgaactcttctcaaccaagctatccaatctttcccctct 37510686

                                            
Query: 445      ttgaagaacattctctatagttttatgc 472
                ||| || ||| |||| ||||||||||||
Sbjct: 37510685 ttggagcacactctcaatagttttatgc 37510658



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                            
Query: 328      caaacttcagagtatagtacaacaactgtttgttttcttcgcctgcttgtagaacatctg 387
                ||||||||||||||||||||| ||   |||||||||||| ||||||||||||||||||||
Sbjct: 37511278 caaacttcagagtatagtacagcattggtttgttttctttgcctgcttgtagaacatctg 37511219



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                            
Query: 476      ataatttttgtttcatccaagtccctctggatttttgttaacttgtcagcctctgcagga 535
                ||||| || ||||||||||| |||||||| |||||    |||||||||||||||||||||
Sbjct: 42473388 ataatcttagtttcatccaaatccctctgaattttcagcaacttgtcagcctctgcagga 42473447

                     
Query: 536      tcctg 540
                |||||
Sbjct: 42473448 tcctg 42473452



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                            
Query: 344      gtacaacaactgtttgttttcttcgcctgcttgtagaacatctg 387
                |||||||||  ||| |||||||| ||||||||||||||||||||
Sbjct: 42472319 gtacaacaagagttggttttcttggcctgcttgtagaacatctg 42472362
to top
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0505D12
          Length = 146951

 Score =  109 bits (55), Expect = 1e-20
 Identities = 64/67 (95%)
 Strand = Plus / Minus

                                                                          
Query: 473    aggataatttttgtttcatccaagtccctctggatttttgttaacttgtcagcctctgca 532
              ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 104962 aggataatttttgtttcatccaagtccctctggattttcattaacttgtcagcctctgca 104903

                     
Query: 533    ggatcct 539
              || ||||
Sbjct: 104902 gggtcct 104896



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                          
Query: 385    ctgtgaagcagcactgaggtctgagcttttttcaaccaagctatccaacctctctcctct 444
              ||||||||||||||| |||||||| || || ||||||||||||||||| || || |||||
Sbjct: 105282 ctgtgaagcagcactcaggtctgaactcttctcaaccaagctatccaatctttcccctct 105223

                                          
Query: 445    ttgaagaacattctctatagttttatgc 472
              ||| || ||| |||| ||||||||||||
Sbjct: 105222 ttggagcacactctcaatagttttatgc 105195



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                          
Query: 328    caaacttcagagtatagtacaacaactgtttgttttcttcgcctgcttgtagaacatctg 387
              ||||||||||||||||||||| ||   |||||||||||| ||||||||||||||||||||
Sbjct: 105815 caaacttcagagtatagtacagcattggtttgttttctttgcctgcttgtagaacatctg 105756
to top
>gb|U64922.1|NTU64922 Nicotiana tabacum geranylgeranylated protein NTGP1 mRNA, complete
           cds
          Length = 940

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 153/188 (81%)
 Strand = Plus / Minus

                                                                       
Query: 359 gttttcttcgcctgcttgtagaacatctgtgaagcagcactgaggtctgagcttttttca 418
           ||||||||||||||||||||||||||||||||||||||||| || ||||| || || |||
Sbjct: 665 gttttcttcgcctgcttgtagaacatctgtgaagcagcacttagatctgaactcttctca 606

                                                                       
Query: 419 accaagctatccaacctctctcctctttgaagaacattctctatagttttatgcaggata 478
           ||||| || || | | |||| || | ||  |  ||| | || || || ||||| || |||
Sbjct: 605 accaaactgtctagcttctcaccccgttctaagacactgtcaattgtcttatggagaata 546

                                                                       
Query: 479 atttttgtttcatccaagtccctctggatttttgttaacttgtcagcctctgcaggatcc 538
           ||||| ||||||||||| || ||||| |||||    | ||| |||||||| |||||||||
Sbjct: 545 attttagtttcatccaactctctctgaattttgaagagcttatcagcctcagcaggatcc 486

                   
Query: 539 tgaaattt 546
           ||||||||
Sbjct: 485 tgaaattt 478
to top
>ref|NM_125191.3| Arabidopsis thaliana YKT61 AT5G58060 (YKT61) mRNA, complete cds
          Length = 942

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 464 gttttatgcaggataatttttgtttcatccaagtccctctggatttttgttaacttgtca 523
           |||||||| |||||||| ||||| |||||||| ||||||||||||||    | ||| |||
Sbjct: 600 gttttatgaaggataatctttgtctcatccaactccctctggattttcaacagcttatca 541

                                  
Query: 524 gcctctgcaggatcctgaaattt 546
           |||||||| || |||||||||||
Sbjct: 540 gcctctgctgggtcctgaaattt 518



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 356 tttgttttcttcgcctgcttgtagaacatctgtga 390
           |||||||||||||| |||||||| |||||||||||
Sbjct: 708 tttgttttcttcgcttgcttgtaaaacatctgtga 674
to top
>gb|AY133669.1| Arabidopsis thaliana AT5g58060/k21l19_40 mRNA, complete cds
          Length = 600

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 464 gttttatgcaggataatttttgtttcatccaagtccctctggatttttgttaacttgtca 523
           |||||||| |||||||| ||||| |||||||| ||||||||||||||    | ||| |||
Sbjct: 470 gttttatgaaggataatctttgtctcatccaactccctctggattttcaacagcttatca 411

                                  
Query: 524 gcctctgcaggatcctgaaattt 546
           |||||||| || |||||||||||
Sbjct: 410 gcctctgctgggtcctgaaattt 388



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 356 tttgttttcttcgcctgcttgtagaacatctgtga 390
           |||||||||||||| |||||||| |||||||||||
Sbjct: 578 tttgttttcttcgcttgcttgtaaaacatctgtga 544
to top
>gb|AF385703.1|AF385703 Arabidopsis thaliana AT5g58060/k21l19_40 mRNA, complete cds
          Length = 940

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 464 gttttatgcaggataatttttgtttcatccaagtccctctggatttttgttaacttgtca 523
           |||||||| |||||||| ||||| |||||||| ||||||||||||||    | ||| |||
Sbjct: 600 gttttatgaaggataatctttgtctcatccaactccctctggattttcaacagcttatca 541

                                  
Query: 524 gcctctgcaggatcctgaaattt 546
           |||||||| || |||||||||||
Sbjct: 540 gcctctgctgggtcctgaaattt 518



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 356 tttgttttcttcgcctgcttgtagaacatctgtga 390
           |||||||||||||| |||||||| |||||||||||
Sbjct: 708 tttgttttcttcgcttgcttgtaaaacatctgtga 674
to top
>gb|AF325040.2|AF325040 Arabidopsis thaliana AT5g58060 (AT5g58060/k21l19_40) mRNA, complete
           cds
          Length = 915

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 464 gttttatgcaggataatttttgtttcatccaagtccctctggatttttgttaacttgtca 523
           |||||||| |||||||| ||||| |||||||| ||||||||||||||    | ||| |||
Sbjct: 600 gttttatgaaggataatctttgtctcatccaactccctctggattttcaacagcttatca 541

                                  
Query: 524 gcctctgcaggatcctgaaattt 546
           |||||||| || |||||||||||
Sbjct: 540 gcctctgctgggtcctgaaattt 518



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 356 tttgttttcttcgcctgcttgtagaacatctgtga 390
           |||||||||||||| |||||||| |||||||||||
Sbjct: 708 tttgttttcttcgcttgcttgtaaaacatctgtga 674
to top
>emb|BX833552.1|CNS0A1UB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL62ZA09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 912

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 464 gttttatgcaggataatttttgtttcatccaagtccctctggatttttgttaacttgtca 523
           |||||||| |||||||| ||||| |||||||| ||||||||||||||    | ||| |||
Sbjct: 573 gttttatgaaggataatctttgtctcatccaactccctctggattttcaacagcttatca 514

                                  
Query: 524 gcctctgcaggatcctgaaattt 546
           |||||||| || |||||||||||
Sbjct: 513 gcctctgctgggtcctgaaattt 491



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 356 tttgttttcttcgcctgcttgtagaacatctgtga 390
           |||||||||||||| |||||||| |||||||||||
Sbjct: 681 tttgttttcttcgcttgcttgtaaaacatctgtga 647
to top
>emb|BX832334.1|CNS09ZUE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH66ZC01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 924

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 464 gttttatgcaggataatttttgtttcatccaagtccctctggatttttgttaacttgtca 523
           |||||||| |||||||| ||||| |||||||| ||||||||||||||    | ||| |||
Sbjct: 589 gttttatgaaggataatctttgtctcatccaactccctctggattttcaacagcttatca 530

                                  
Query: 524 gcctctgcaggatcctgaaattt 546
           |||||||| || |||||||||||
Sbjct: 529 gcctctgctgggtcctgaaattt 507



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 356 tttgttttcttcgcctgcttgtagaacatctgtga 390
           |||||||||||||| |||||||| |||||||||||
Sbjct: 697 tttgttttcttcgcttgcttgtaaaacatctgtga 663
to top
>emb|BX829912.1|CNS0A01W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB45ZF12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 925

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 464 gttttatgcaggataatttttgtttcatccaagtccctctggatttttgttaacttgtca 523
           |||||||| |||||||| ||||| |||||||| ||||||||||||||    | ||| |||
Sbjct: 586 gttttatgaaggataatctttgtctcatccaactccctctggattttcaacagcttatca 527

                                  
Query: 524 gcctctgcaggatcctgaaattt 546
           |||||||| || |||||||||||
Sbjct: 526 gcctctgctgggtcctgaaattt 504



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tttgttttcttcgcctgcttgtagaacatctgtga 390
           |||||||||||||| |||||||  |||||||||||
Sbjct: 694 tttgttttcttcgcttgcttgtgaaacatctgtga 660
to top
>gb|U64918.1|ATU64918 Arabidopsis thaliana geranylgeranylated protein ATGP1 mRNA,
           complete cds
          Length = 863

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 464 gttttatgcaggataatttttgtttcatccaagtccctctggatttttgttaacttgtca 523
           |||||||| |||||||| ||||| |||||||| ||||||||||||||    | ||| |||
Sbjct: 537 gttttatgaaggataatctttgtctcatccaactccctctggattttcaacagcttatca 478

                                  
Query: 524 gcctctgcaggatcctgaaattt 546
           |||||||| || |||||||||||
Sbjct: 477 gcctctgctgggtcctgaaattt 455



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 356 tttgttttcttcgcctgcttgtagaacatctgtga 390
           |||||||||||||| |||||||| |||||||||||
Sbjct: 645 tttgttttcttcgcttgcttgtaaaacatctgtga 611
to top
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0483G10
          Length = 190721

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                          
Query: 476    ataatttttgtttcatccaagtccctctggatttttgttaacttgtcagcctctgcagga 535
              ||||| || ||||||||||| |||||||| |||||    |||||||||||||||||||||
Sbjct: 132726 ataatcttagtttcatccaaatccctctgaattttcagcaacttgtcagcctctgcagga 132785

                   
Query: 536    tcctg 540
              |||||
Sbjct: 132786 tcctg 132790



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                          
Query: 344    gtacaacaactgtttgttttcttcgcctgcttgtagaacatctg 387
              |||||||||  ||| |||||||| ||||||||||||||||||||
Sbjct: 131657 gtacaacaagagttggttttcttggcctgcttgtagaacatctg 131700
to top
>ref|NM_125203.1| Arabidopsis thaliana ATYKT62 AT5G58180 (ATYKT62) mRNA, complete cds
          Length = 600

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 464 gttttatgcaggataatttttgtttcatccaagtccctctggatttt 510
           |||||||| |||||||| || || |||||||| ||||||||||||||
Sbjct: 470 gttttatgaaggataatcttggtctcatccaattccctctggatttt 424



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 355 gtttgttttcttcgcctgcttgtagaacatct 386
           ||||||||||||||| |||||||| |||||||
Sbjct: 579 gtttgttttcttcgcttgcttgtaaaacatct 548
to top
>gb|DQ447089.1| Arabidopsis thaliana clone pENTR221-At5g58180 SNARE protein-like
           protein (At5g58180) mRNA, complete cds
          Length = 702

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 464 gttttatgcaggataatttttgtttcatccaagtccctctggatttt 510
           |||||||| |||||||| || || |||||||| ||||||||||||||
Sbjct: 572 gttttatgaaggataatcttggtctcatccaattccctctggatttt 526



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 355 gtttgttttcttcgcctgcttgtagaacatct 386
           ||||||||||||||| |||||||| |||||||
Sbjct: 681 gtttgttttcttcgcttgcttgtaaaacatct 650
to top
>dbj|AB024029.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21L19
          Length = 41087

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                         
Query: 473   aggataatttttgtttcatccaagtccctctggatttttgttaacttgtcagcctctgca 532
             |||||||| ||||| |||||||| ||||||||||||||    | ||| ||||||||||| 
Sbjct: 13539 aggataatctttgtctcatccaactccctctggattttcaacagcttatcagcctctgct 13480

                       
Query: 533   ggatcctgaa 542
             || |||||||
Sbjct: 13479 gggtcctgaa 13470



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 356   tttgttttcttcgcctgcttgtagaacatctgt 388
             |||||||||||||| |||||||| |||||||||
Sbjct: 14321 tttgttttcttcgcttgcttgtaaaacatctgt 14289
to top
>dbj|AB019228.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCK7
          Length = 87090

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 355   gtttgttttcttcgcctgcttgtagaacatctgt 388
             ||||||||||||||| |||||||| |||||||||
Sbjct: 18264 gtttgttttcttcgcttgcttgtaaaacatctgt 18231



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 473   aggataatttttgtttcatccaagtccctctggatttt 510
             |||||||| || || |||||||| ||||||||||||||
Sbjct: 17874 aggataatcttggtctcatccaattccctctggatttt 17837
to top
>ref|NM_125192.3| Arabidopsis thaliana transporter AT5G58070 mRNA, complete cds
          Length = 1065

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                             
Query: 356  tttgttttcttcgcctgcttgtagaacatctgt 388
            |||||||||||||| |||||||| |||||||||
Sbjct: 1020 tttgttttcttcgcttgcttgtaaaacatctgt 1052
to top
>gb|AF475112.1| Triticum aestivum geranylgeranylated protein ATGP1 mRNA, partial
           cds
          Length = 531

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/36 (94%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                               
Query: 521 tcagcctctgcaggatcct-gaaattttgtcaaagc 555
           ||||||| ||||||||||| ||||||||||||||||
Sbjct: 531 tcagcctntgcaggatccttgaaattttgtcaaagc 496
to top
>gb|AC129563.14| Mus musculus chromosome 15, clone RP23-223M20, complete sequence
          Length = 175021

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 429    ccaacctctctcctctttgaag 450
              ||||||||||||||||||||||
Sbjct: 126225 ccaacctctctcctctttgaag 126246
to top
>gb|AC123656.9| Mus musculus chromosome 15, clone RP23-188M21, complete sequence
          Length = 200922

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 65     caacatacataaattaagggg 85
              |||||||||||||||||||||
Sbjct: 188904 caacatacataaattaagggg 188884
to top
>ref|XM_707538.1| Candida albicans SC5314 histidinol-phosphate aminotransferase
           (CaO19.4177), mRNA
          Length = 867

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 347 caacaactgtttgttttcttc 367
           |||||||||||||||||||||
Sbjct: 828 caacaactgtttgttttcttc 808
to top
>ref|XM_707688.1| Candida albicans SC5314 histidinol-phosphate aminotransferase
           (CaO19.11653), mRNA
          Length = 867

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 347 caacaactgtttgttttcttc 367
           |||||||||||||||||||||
Sbjct: 828 caacaactgtttgttttcttc 808
to top
>gb|AC139360.8| Mus musculus chromosome 3, clone RP23-324F4, complete sequence
          Length = 186836

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 430    caacctctctcctctttgaagaaca 454
              ||||||||||||||| |||||||||
Sbjct: 166225 caacctctctcctctctgaagaaca 166201
to top
>gb|AC126460.4| Mus musculus BAC clone RP23-187E3 from 3, complete sequence
          Length = 192918

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 430    caacctctctcctctttgaagaaca 454
              ||||||||||||||| |||||||||
Sbjct: 176822 caacctctctcctctctgaagaaca 176798
to top
>gb|AC134909.4| Mus musculus chromosome 3 clone RP23-402O2, complete sequence
          Length = 183831

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 430   caacctctctcctctttgaagaaca 454
             ||||||||||||||| |||||||||
Sbjct: 35357 caacctctctcctctctgaagaaca 35333
to top
>gb|AC142454.4| Mus musculus BAC clone RP23-313G1 from chromosome 3, complete sequence
          Length = 183223

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 430    caacctctctcctctttgaagaaca 454
              ||||||||||||||| |||||||||
Sbjct: 166223 caacctctctcctctctgaagaaca 166199
to top
>emb|BX830861.1|CNS0A0TJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS31ZF08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1008

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 356 tttgttttcttcgcctgcttgtagaacatctgt 388
           |||||||||||||| ||||| || |||||||||
Sbjct: 963 tttgttttcttcgcttgcttctaaaacatctgt 995
to top
>gb|AC121114.10| Mus musculus chromosome 15, clone RP23-63M19, complete sequence
          Length = 337658

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 65     caacatacataaattaagggg 85
              |||||||||||||||||||||
Sbjct: 243154 caacatacataaattaagggg 243174
to top
>gb|AC152950.2| Mus musculus 10 BAC RP23-138J18 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 181465

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 497   tccctctggatttttgttaacttgt 521
             ||||||||||||||||||| |||||
Sbjct: 42671 tccctctggatttttgttagcttgt 42647
to top
>gb|AY904240.1| Pyrococcus sp. V232 deoxypusine synthase and prephenate dehydratase
           genes, partial cds
          Length = 777

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 433 cctctctcctctttgaagaa 452
           ||||||||||||||||||||
Sbjct: 53  cctctctcctctttgaagaa 34
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>gb|AY904239.1| Pyrococcus sp. V231 deoxypusine synthase and prephenate dehydratase
           genes, partial cds
          Length = 778

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 433 cctctctcctctttgaagaa 452
           ||||||||||||||||||||
Sbjct: 53  cctctctcctctttgaagaa 34
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>gb|AY904238.1| Pyrococcus sp. V222 deoxypusine synthase and prephenate dehydratase
           genes, partial cds
          Length = 778

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 433 cctctctcctctttgaagaa 452
           ||||||||||||||||||||
Sbjct: 53  cctctctcctctttgaagaa 34
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>gb|AY904237.1| Pyrococcus sp. V221 deoxypusine synthase and prephenate dehydratase
           genes, partial cds
          Length = 778

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 433 cctctctcctctttgaagaa 452
           ||||||||||||||||||||
Sbjct: 53  cctctctcctctttgaagaa 34
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>gb|AY904236.1| Pyrococcus sp. V212 deoxypusine synthase and prephenate dehydratase
           genes, partial cds
          Length = 778

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 433 cctctctcctctttgaagaa 452
           ||||||||||||||||||||
Sbjct: 53  cctctctcctctttgaagaa 34
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>gb|AY904235.1| Pyrococcus sp. V211 deoxypusine synthase and prephenate dehydratase
           genes, partial cds
          Length = 778

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 433 cctctctcctctttgaagaa 452
           ||||||||||||||||||||
Sbjct: 53  cctctctcctctttgaagaa 34
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>gb|AY904234.1| Pyrococcus sp. V73 deoxypusine synthase and prephenate dehydratase
           genes, partial cds
          Length = 776

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 433 cctctctcctctttgaagaa 452
           ||||||||||||||||||||
Sbjct: 53  cctctctcctctttgaagaa 34
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>gb|AY904233.1| Pyrococcus sp. V72 deoxypusine synthase and prephenate dehydratase
           genes, partial cds
          Length = 778

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 433 cctctctcctctttgaagaa 452
           ||||||||||||||||||||
Sbjct: 53  cctctctcctctttgaagaa 34
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>gb|AY904231.1| Pyrococcus sp. V62 deoxypusine synthase and prephenate dehydratase
           genes, partial cds
          Length = 778

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 433 cctctctcctctttgaagaa 452
           ||||||||||||||||||||
Sbjct: 53  cctctctcctctttgaagaa 34
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>gb|AY904230.1| Pyrococcus sp. V61 deoxypusine synthase and prephenate dehydratase
           genes, partial cds
          Length = 778

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 433 cctctctcctctttgaagaa 452
           ||||||||||||||||||||
Sbjct: 53  cctctctcctctttgaagaa 34
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>gb|AY904229.1| Pyrococcus sp. VB113 deoxypusine synthase and prephenate
           dehydratase genes, partial cds
          Length = 778

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 433 cctctctcctctttgaagaa 452
           ||||||||||||||||||||
Sbjct: 53  cctctctcctctttgaagaa 34
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>gb|AY904228.1| Pyrococcus sp. VB112 deoxypusine synthase and prephenate
           dehydratase genes, partial cds
          Length = 774

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 433 cctctctcctctttgaagaa 452
           ||||||||||||||||||||
Sbjct: 53  cctctctcctctttgaagaa 34
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>gb|AY904227.1| Pyrococcus sp. VB93 deoxypusine synthase and prephenate dehydratase
           genes, partial cds
          Length = 778

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 433 cctctctcctctttgaagaa 452
           ||||||||||||||||||||
Sbjct: 53  cctctctcctctttgaagaa 34
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>gb|AY904226.1| Pyrococcus sp. VB86 deoxypusine synthase and prephenate dehydratase
           genes, partial cds
          Length = 778

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 433 cctctctcctctttgaagaa 452
           ||||||||||||||||||||
Sbjct: 53  cctctctcctctttgaagaa 34
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>gb|AY904225.1| Pyrococcus sp. VB85 deoxypusine synthase and prephenate dehydratase
           genes, partial cds
          Length = 778

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 433 cctctctcctctttgaagaa 452
           ||||||||||||||||||||
Sbjct: 53  cctctctcctctttgaagaa 34
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>gb|AY904224.1| Pyrococcus sp. VB83 deoxypusine synthase and prephenate dehydratase
           genes, partial cds
          Length = 778

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 433 cctctctcctctttgaagaa 452
           ||||||||||||||||||||
Sbjct: 53  cctctctcctctttgaagaa 34
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>gb|AY904223.1| Pyrococcus sp. VB82 deoxypusine synthase and prephenate dehydratase
           genes, partial cds
          Length = 778

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 433 cctctctcctctttgaagaa 452
           ||||||||||||||||||||
Sbjct: 53  cctctctcctctttgaagaa 34
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>gb|AY904222.1| Pyrococcus sp. VB81 deoxypusine synthase and prephenate dehydratase
           genes, partial cds
          Length = 778

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 433 cctctctcctctttgaagaa 452
           ||||||||||||||||||||
Sbjct: 53  cctctctcctctttgaagaa 34
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>gb|AE000659.1|HUAE000659 Homo sapiens T-cell receptor alpha delta locus from bases 250472 to
             501670 (section 2 of 5) of the Complete Nucleotide
             Sequence
          Length = 251199

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 444   tttgaagaacattctctata 463
             ||||||||||||||||||||
Sbjct: 76909 tttgaagaacattctctata 76928
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>gb|AC102090.14| Mus musculus chromosome 1, clone RP23-7I3, complete sequence
          Length = 183269

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 298   ccttccaagagagactgaaggatc 321
             ||||||||| ||||||||||||||
Sbjct: 37410 ccttccaagtgagactgaaggatc 37433
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>gb|AC125216.3| Mus musculus BAC clone RP23-109J14 from 1, complete sequence
          Length = 218169

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 392   gcagcactgaggtctgagct 411
             ||||||||||||||||||||
Sbjct: 36988 gcagcactgaggtctgagct 36969
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>gb|AC122027.1| Mus musculus BAC clone RP24-390L20 from 1, complete sequence
          Length = 150136

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 392  gcagcactgaggtctgagct 411
            ||||||||||||||||||||
Sbjct: 6227 gcagcactgaggtctgagct 6246
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>emb|Z99108.2|BSUB0005 Bacillus subtilis complete genome (section 5 of 21): from 813670 to
             1011078
          Length = 197409

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   tattcaattgattttctttc 292
             ||||||||||||||||||||
Sbjct: 64371 tattcaattgattttctttc 64390
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>emb|BX957230.5| Zebrafish DNA sequence from clone DKEY-106I11 in linkage group 6,
             complete sequence
          Length = 68670

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   gtacaacaactgtttgtttt 363
             ||||||||||||||||||||
Sbjct: 59700 gtacaacaactgtttgtttt 59681
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>gb|AC159939.3| Loxodonta africana clone VMRC15-235M14, complete sequence
          Length = 144550

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 431    aacctctctcctctttgaag 450
              ||||||||||||||||||||
Sbjct: 135810 aacctctctcctctttgaag 135829
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>emb|BX663616.13| Zebrafish DNA sequence from clone DKEY-287H22 in linkage group 7,
             complete sequence
          Length = 150010

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   caagctatccaacctctctc 440
             ||||||||||||||||||||
Sbjct: 34778 caagctatccaacctctctc 34759
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>gb|AE008402.1|AE008402 Streptococcus pneumoniae R6 section 18 of 184 of the complete genome
          Length = 11941

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 216   acagtattgatcccggcacgtttt 239
             ||||||||||| ||||||||||||
Sbjct: 11307 acagtattgataccggcacgtttt 11284
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>ref|XM_342829.2| PREDICTED: Rattus norvegicus F-box only protein 10 (predicted)
            (Fbxo10_predicted), mRNA
          Length = 4955

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 57   cagttttccaacatacataa 76
            ||||||||||||||||||||
Sbjct: 1193 cagttttccaacatacataa 1174
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>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome
          Length = 2160842

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 216    acagtattgatcccggcacgtttt 239
              ||||||||||| ||||||||||||
Sbjct: 207316 acagtattgataccggcacgtttt 207293
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>emb|CR318588.10| Zebrafish DNA sequence from clone DKEYP-1H4 in linkage group 18,
             complete sequence
          Length = 179350

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 414   tttcaaccaagctatccaac 433
             ||||||||||||||||||||
Sbjct: 69560 tttcaaccaagctatccaac 69541
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>emb|AL732455.6| Zebrafish DNA sequence from clone CH211-225J17 in linkage group 7,
            complete sequence
          Length = 192578

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 421  caagctatccaacctctctc 440
            ||||||||||||||||||||
Sbjct: 2384 caagctatccaacctctctc 2403
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>gb|AF006075.1|AF006075 Bacillus subtilis acetoin dehydrogenase enzyme system gene cluster,
           ribosomal protein L6-like protein gene, partial cds,
           TPP-dependent acetoin dehydrogenase, E1 alpha-subunit
           (acoA), TPP-dependent acetoin dehydrogenase, E1
           beta-subunit (acoB), dihydrolipoamide acetyltransferase
           (acoC) and dihydrolipoamide dehydrogenase (acoL) genes,
           complete cds, and regulatory protein (acoR) gene,
           partial cds
          Length = 7343

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 273 tattcaattgattttctttc 292
           ||||||||||||||||||||
Sbjct: 528 tattcaattgattttctttc 547
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>emb|AL590446.1|CNS07EGD chromosome VI of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 220294

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 364    cttcgcctgcttgtagaaca 383
              ||||||||||||||||||||
Sbjct: 145103 cttcgcctgcttgtagaaca 145122
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>gb|AC140230.3| Mus musculus BAC clone RP24-493E4 from 14, complete sequence
          Length = 154085

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    aatagcaaccagttttccaa 67
             ||||||||||||||||||||
Sbjct: 51337 aatagcaaccagttttccaa 51356
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>ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus (TCRA/TCRD) on chromosome
              14
          Length = 1071646

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 444    tttgaagaacattctctata 463
              ||||||||||||||||||||
Sbjct: 327380 tttgaagaacattctctata 327399
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>emb|AL844198.7| Mouse DNA sequence from clone RP23-438P13 on chromosome 4, complete
             sequence
          Length = 176049

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   gagccttccaagagagactg 314
             ||||||||||||||||||||
Sbjct: 79571 gagccttccaagagagactg 79590
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>dbj|D78509.1| Bacillus subtilis YfjG-YfjR genes, complete cds
          Length = 19712

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   tattcaattgattttctttc 292
             ||||||||||||||||||||
Sbjct: 10934 tattcaattgattttctttc 10915
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>emb|AL592482.6| Mouse DNA sequence from clone RP23-220K2 on chromosome 1, complete
              sequence
          Length = 124174

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 298    ccttccaagagagactgaaggatc 321
              ||||||||| ||||||||||||||
Sbjct: 107775 ccttccaagtgagactgaaggatc 107798


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,954,552
Number of Sequences: 3902068
Number of extensions: 5954552
Number of successful extensions: 114840
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 114583
Number of HSP's gapped (non-prelim): 242
length of query: 559
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 536
effective length of database: 17,143,297,704
effective search space: 9188807569344
effective search space used: 9188807569344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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