>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 671     tccaagtaaatagcgtgagtag 692
               ||||||||||||||||||||||
Sbjct: 4008744 tccaagtaaatagcgtgagtag 4008723

>emb|BX927385.15| Zebrafish DNA sequence from clone DKEY-76P7 in linkage group 10, complete
              sequence
          Length = 243665

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 655    catgttcttcgatgagtccaag 676
              ||||||||||||||||||||||
Sbjct: 230216 catgttcttcgatgagtccaag 230237

>dbj|AP004629.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT07I01b, TM0091b,
             complete sequence
          Length = 59720

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 651   tcttcatgttcttcgatgagt 671
             |||||||||||||||||||||
Sbjct: 50721 tcttcatgttcttcgatgagt 50741



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 651   tcttcatgttcttcgatgagt 671
             |||||||||||||||||||||
Sbjct: 42764 tcttcatgttcttcgatgagt 42744

>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 344    aactcagctcggagtcgttg 363
              ||||||||||||||||||||
Sbjct: 114090 aactcagctcggagtcgttg 114109

>ref|XM_419005.1| PREDICTED: Gallus gallus similar to dynein, axonemal, heavy
            polypeptide 5 (LOC420920), mRNA
          Length = 4372

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 639  tgtaatcctttttcttcatg 658
            ||||||||||||||||||||
Sbjct: 1843 tgtaatcctttttcttcatg 1824

>gb|AC111052.10| Mus musculus chromosome 17, clone RP24-401D24, complete sequence
          Length = 148512

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 642    aatcctttttcttcatgttc 661
              ||||||||||||||||||||
Sbjct: 124564 aatcctttttcttcatgttc 124583

>gb|DQ481663.1| Takifugu rubripes HoxAa gene cluster, complete sequence
          Length = 385816

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    acaaacacattgtcatatat 138
              ||||||||||||||||||||
Sbjct: 173009 acaaacacattgtcatatat 172990

>gb|AC127557.5| Mus musculus BAC clone RP24-416I20 from chromosome 17, complete sequence
          Length = 148854

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 642    aatcctttttcttcatgttc 661
              ||||||||||||||||||||
Sbjct: 118041 aatcctttttcttcatgttc 118022

>gb|AC121800.2| Mus musculus BAC clone RP23-430F24 from 6, complete sequence
          Length = 188312

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 376    tcctaggttctttgcccatt 395
              ||||||||||||||||||||
Sbjct: 138440 tcctaggttctttgcccatt 138421

>gb|AC183098.3| Mus musculus BAC clone CH25-385D19 from chromosome 6, complete
            sequence
          Length = 101511

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 376  tcctaggttctttgcccatt 395
            ||||||||||||||||||||
Sbjct: 8847 tcctaggttctttgcccatt 8828

>gb|AC108142.3| Homo sapiens BAC clone RP11-402C9 from 4, complete sequence
          Length = 62624

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 527   tcagtcttataaacaaagca 546
             ||||||||||||||||||||
Sbjct: 17213 tcagtcttataaacaaagca 17194

>gb|AC007915.3|AC007915 Genomic sequence for Arabidopsis thaliana BAC F27F5 from chromosome
            I, complete sequence
          Length = 137336

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 50   taattacatcacaaataaag 69
            ||||||||||||||||||||
Sbjct: 5667 taattacatcacaaataaag 5648

>gb|U92573.1|FRU92573 Fugu rubripes homeobox protein HOXA-9 (FrHOXA-10) gene, complete cds;
            and homeodomain protein HOXA-9 (FrHOXA-9) gene, complete
            cds
          Length = 13583

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 119  acaaacacattgtcatatat 138
            ||||||||||||||||||||
Sbjct: 5324 acaaacacattgtcatatat 5305

>gb|AC020576.2|T12C22 Sequence of BAC T12C22 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 115421

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    taattacatcacaaataaag 69
             ||||||||||||||||||||
Sbjct: 92407 taattacatcacaaataaag 92388

>emb|CR855707.2| Xenopus tropicalis finished cDNA, clone TGas113g16
          Length = 2333

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 641 taatcctttttcttcatgtt 660
           ||||||||||||||||||||
Sbjct: 971 taatcctttttcttcatgtt 952

>dbj|AP001021.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-793A3, complete
             sequence
          Length = 222596

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 516   tgttgtagaagtcagtctta 535
             ||||||||||||||||||||
Sbjct: 52047 tgttgtagaagtcagtctta 52028

>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 348     cagctcggagtcgttgaact 367
               ||||||||||||||||||||
Sbjct: 5283911 cagctcggagtcgttgaact 5283930

>gb|U87553.1|U87553 Drosophila grimshawi retrotransposon 1731-related pol
           polyprotein-like sequence
          Length = 377

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 431 cgaaggttctgctgatcccg 450
           ||||||||||||||||||||
Sbjct: 103 cgaaggttctgctgatcccg 122

>emb|CT025736.6| Mouse DNA sequence from clone RP23-469A22 on chromosome 17, complete
              sequence
          Length = 168581

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 642    aatcctttttcttcatgttc 661
              ||||||||||||||||||||
Sbjct: 140724 aatcctttttcttcatgttc 140743


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,205,402
Number of Sequences: 3902068
Number of extensions: 5205402
Number of successful extensions: 89472
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89406
Number of HSP's gapped (non-prelim): 66
length of query: 695
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 672
effective length of database: 17,143,297,704
effective search space: 11520296057088
effective search space used: 11520296057088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)