ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6h14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY111286.1| Zea mays CL10549_1 mRNA sequence 224 3e-55
2ref|NM_185281.1| Oryza sativa (japonica cultivar-group), predic... 222 1e-54
3dbj|AK062718.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 1e-54
4gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome... 131 3e-27
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
6gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome... 131 3e-27
7gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 56 1e-04
8ref|NM_116125.2| Arabidopsis thaliana heat shock protein binding... 50 0.009
9emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BA... 50 0.009
10gb|AY125534.1| Arabidopsis thaliana At3g62600/F26K9_30 mRNA, com... 50 0.009
11gb|AY094429.1| Arabidopsis thaliana AT3g62600/F26K9_30 mRNA, com... 50 0.009
12gb|AY087640.1| Arabidopsis thaliana clone 37292 mRNA, complete s... 50 0.009
13emb|AL096792.5|HS1067P23 Human DNA sequence from clone RP5-1067P... 48 0.034
14gb|AC138595.10| Mus musculus chromosome 1, clone RP24-286D13, co... 44 0.54
15gb|AF312994.1|AF312994 Mus musculus chromosome 1 clone MML, comp... 44 0.54
16emb|AJ297131.1|MMAJ2971 Mus musculus SIL, MAP_17, CYP_a, SCL & C... 44 0.54
17emb|AL645473.12| Mouse DNA sequence from clone RP23-246H17 on ch... 44 0.54
18emb|AL731651.1| Mouse DNA sequence from clone XX-PAC129 on chrom... 44 0.54
19gb|CP000264.1| Jannaschia sp. CCS1, complete genome 42 2.1
20emb|AL590444.1|CNS07EGB chromosome IV of strain GB-M1 of Encepha... 42 2.1
21ref|XM_509721.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 8.4
22gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.4
23gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 8.4
24gb|AC135359.2| Mus musculus BAC clone RP24-209E17 from chromosom... 40 8.4
25gb|AC005105.3| Homo sapiens BAC clone CTA-491N20 from 7, complet... 40 8.4
26emb|BX890590.11| Zebrafish DNA sequence from clone DKEY-15H19 in... 40 8.4
27ref|XM_567811.1| Cryptococcus neoformans var. neoformans JEC21 p... 40 8.4
28gb|AC124720.3| Mus musculus BAC clone RP23-387F14 from chromosom... 40 8.4
29gb|AC145329.35| Medicago truncatula clone mth2-8i21, complete se... 40 8.4
30emb|AL392087.7| Human DNA sequence from clone RP11-454H24 on chr... 40 8.4
31emb|AL355795.13| Human DNA sequence from clone RP4-668G5 on chro... 40 8.4
32emb|AL157769.12| Human DNA sequence from clone RP11-484I6 on chr... 40 8.4
33gb|AC157769.3| Mus musculus chromosome 1, clone RP24-314L7, comp... 40 8.4
34gb|AC012558.9| Homo sapiens chromosome 10 clone RP11-174J11, com... 40 8.4
35gb|AC099792.2| Homo sapiens chromosome 1 clone RP11-436K8, compl... 40 8.4
36ref|XM_937552.1| PREDICTED: Homo sapiens similar to Temporarily ... 40 8.4
37ref|XM_062871.7| PREDICTED: Homo sapiens similar to Temporarily ... 40 8.4
38gb|AC138023.2| Homo sapiens chromosome 3 clone RP11-7G8, complet... 40 8.4
39emb|BX004969.5| Zebrafish DNA sequence from clone CH211-89C12 in... 40 8.4
40emb|AL845516.8| Zebrafish DNA sequence from clone DKEY-43F11, co... 40 8.4
41gb|AC002526.1|AC002526 Human PAC clone RP4-558L21 from Xq23, com... 40 8.4
42emb|Z16559.1|HS095WC9 H. sapiens (D1S203) DNA segment containing... 40 8.4
43gb|AC005873.3|AC005873 citb_15_o_21, complete sequence 40 8.4
44gb|AC154015.3| Mus musculus 6 BAC RP24-194J12 (Roswell Park Canc... 40 8.4
45emb|BX005402.7| Zebrafish DNA sequence from clone DKEY-237J11, c... 40 8.4
46gb|AC122860.5| Mus musculus BAC clone RP23-135A22 from 12, compl... 40 8.4
47emb|AL772291.9| Mouse DNA sequence from clone RP23-395G1 on chro... 40 8.4 
>gb|AY111286.1| Zea mays CL10549_1 mRNA sequence
          Length = 1211

 Score =  224 bits (113), Expect = 3e-55
 Identities = 227/265 (85%)
 Strand = Plus / Plus

                                                                       
Query: 312 agaacatccttcagcttggccttctggtcgtccgtcagagttttcgggaacaacacctcg 371
           ||||||||||| |||||||||||||||||  | || || ||||||||||| |||||||||
Sbjct: 302 agaacatccttaagcttggccttctggtcagcggttagggttttcgggaataacacctcg 361

                                                                       
Query: 372 aatgtcacatacagatcgcctttcttgttgctttggtgcaatggcatgccctctcctttg 431
           |||||||||||||| || |||||||||||||||||||  | ||||||||| || ||||||
Sbjct: 362 aatgtcacatacaggtcacctttcttgttgctttggtatagtggcatgccttcacctttg 421

                                                                       
Query: 432 aatttccttacctccttgggcttggtaacaccctgcgagccgatttggaccaaatggttg 491
           || ||||| | |||||| || ||||| |  ||||  | ||| ||||  |||| |||||||
Sbjct: 422 aacttcctgatctccttcggtttggtgatgcccttggtgccaatttctaccagatggttg 481

                                                                       
Query: 492 tcaagatgcttgaggttcttctcgaatccaaccagagcttggagcagggagattgtaact 551
           |||||||||||||   |||||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 482 tcaagatgcttgattgtcttctcgaaaccaaccagagcttgcagcagggatattgtaact 541

                                    
Query: 552 gttgcatgtagatcgttgccttctc 576
           |||||||| || || ||||||||||
Sbjct: 542 gttgcatgcaggtcattgccttctc 566



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 217 gcttcttcctatgcaagctacttggaaaattt 248
           ||||||||||||||||||||||  ||||||||
Sbjct: 210 gcttcttcctatgcaagctactccgaaaattt 241
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>ref|NM_185281.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1044

 Score =  222 bits (112), Expect = 1e-54
 Identities = 250/296 (84%)
 Strand = Plus / Minus

                                                                        
Query: 320  cttcagcttggccttctggtcgtccgtcagagttttcgggaacaacacctcgaatgtcac 379
            ||||||||||| |||||||||||| || || ||||||||||| || |||||||| || ||
Sbjct: 1029 cttcagcttggacttctggtcgtcggttagggttttcgggaataaaacctcgaaagttac 970

                                                                        
Query: 380  atacagatcgcctttcttgttgctttggtgcaatggcatgccctctcctttgaatttcct 439
            ||| || ||||||||||||||||| |||| ||||||||| || || |||||||| |||||
Sbjct: 969  atataggtcgcctttcttgttgctctggtacaatggcattccttcccctttgaacttcct 910

                                                                        
Query: 440  tacctccttgggcttggtaacaccctgcgagccgatttggaccaaatggttgtcaagatg 499
             ||||||||||| ||||| |  ||||  | ||| ||||  |||| ||| ||||| |||||
Sbjct: 909  aacctccttgggtttggtgatccccttggtgccaatttccaccatatgattgtccagatg 850

                                                                        
Query: 500  cttgaggttcttctcgaatccaaccagagcttggagcagggagattgtaactgttgcatg 559
            ||| | | |||||||||| || ||||||||||||||||||||||||||||| ||||  ||
Sbjct: 849  cttaatggtcttctcgaagccgaccagagcttggagcagggagattgtaacagttgtgtg 790

                                                                    
Query: 560  tagatcgttgccttctcttctgaagcggtcatgtggtgctgtccgaatcctgaact 615
             || || ||||||||||||||||| || |||||||||||||| || ||||| ||||
Sbjct: 789  caggtcattgccttctcttctgaatcgctcatgtggtgctgttcggatcctaaact 734
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>dbj|AK062718.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-C11, full
           insert sequence
          Length = 827

 Score =  222 bits (112), Expect = 1e-54
 Identities = 250/296 (84%)
 Strand = Plus / Minus

                                                                       
Query: 320 cttcagcttggccttctggtcgtccgtcagagttttcgggaacaacacctcgaatgtcac 379
           ||||||||||| |||||||||||| || || ||||||||||| || |||||||| || ||
Sbjct: 428 cttcagcttggacttctggtcgtcggttagggttttcgggaataaaacctcgaaagttac 369

                                                                       
Query: 380 atacagatcgcctttcttgttgctttggtgcaatggcatgccctctcctttgaatttcct 439
           ||| || ||||||||||||||||| |||| ||||||||| || || |||||||| |||||
Sbjct: 368 atataggtcgcctttcttgttgctctggtacaatggcattccttcccctttgaacttcct 309

                                                                       
Query: 440 tacctccttgggcttggtaacaccctgcgagccgatttggaccaaatggttgtcaagatg 499
            ||||||||||| ||||| |  ||||  | ||| ||||  |||| ||| ||||| |||||
Sbjct: 308 aacctccttgggtttggtgatccccttggtgccaatttccaccatatgattgtccagatg 249

                                                                       
Query: 500 cttgaggttcttctcgaatccaaccagagcttggagcagggagattgtaactgttgcatg 559
           ||| | | |||||||||| || ||||||||||||||||||||||||||||| ||||  ||
Sbjct: 248 cttaatggtcttctcgaagccgaccagagcttggagcagggagattgtaacagttgtgtg 189

                                                                   
Query: 560 tagatcgttgccttctcttctgaagcggtcatgtggtgctgtccgaatcctgaact 615
            || || ||||||||||||||||| || |||||||||||||| || ||||| ||||
Sbjct: 188 caggtcattgccttctcttctgaatcgctcatgtggtgctgttcggatcctaaact 133
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>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05,
              complete sequence
          Length = 145044

 Score =  131 bits (66), Expect = 3e-27
 Identities = 120/138 (86%)
 Strand = Plus / Minus

                                                                          
Query: 320    cttcagcttggccttctggtcgtccgtcagagttttcgggaacaacacctcgaatgtcac 379
              ||||||||||| |||||||||||| || || ||||||||||| || |||||||| || ||
Sbjct: 124627 cttcagcttggacttctggtcgtcggttagggttttcgggaataaaacctcgaaagttac 124568

                                                                          
Query: 380    atacagatcgcctttcttgttgctttggtgcaatggcatgccctctcctttgaatttcct 439
              ||| || ||||||||||||||||| |||| ||||||||| || || |||||||| |||||
Sbjct: 124567 atataggtcgcctttcttgttgctctggtacaatggcattccttcccctttgaacttcct 124508

                                
Query: 440    tacctccttgggcttggt 457
               ||||||||||| |||||
Sbjct: 124507 aacctccttgggtttggt 124490



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                          
Query: 536    cagggagattgtaactgttgcatgtagatcgttgccttctcttctgaagcggtcatgtgg 595
              ||||||||||||||| ||||  || || || ||||||||||||||||| || ||||||||
Sbjct: 123891 cagggagattgtaacagttgtgtgcaggtcattgccttctcttctgaatcgctcatgtgg 123832

                                  
Query: 596    tgctgtccgaatcctgaact 615
              |||||| || ||||| ||||
Sbjct: 123831 tgctgttcggatcctaaact 123812



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                       
Query: 480    accaaatggttgtcaagatgcttgaggttcttctcgaatccaaccagagcttggagc 536
              |||| ||| ||||| |||||||| | | |||||||||| || |||||||||||||||
Sbjct: 124359 accatatgattgtccagatgcttaatggtcttctcgaagccgaccagagcttggagc 124303
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  131 bits (66), Expect = 3e-27
 Identities = 120/138 (86%)
 Strand = Plus / Minus

                                                                           
Query: 320     cttcagcttggccttctggtcgtccgtcagagttttcgggaacaacacctcgaatgtcac 379
               ||||||||||| |||||||||||| || || ||||||||||| || |||||||| || ||
Sbjct: 3246910 cttcagcttggacttctggtcgtcggttagggttttcgggaataaaacctcgaaagttac 3246851

                                                                           
Query: 380     atacagatcgcctttcttgttgctttggtgcaatggcatgccctctcctttgaatttcct 439
               ||| || ||||||||||||||||| |||| ||||||||| || || |||||||| |||||
Sbjct: 3246850 atataggtcgcctttcttgttgctctggtacaatggcattccttcccctttgaacttcct 3246791

                                 
Query: 440     tacctccttgggcttggt 457
                ||||||||||| |||||
Sbjct: 3246790 aacctccttgggtttggt 3246773



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                           
Query: 536     cagggagattgtaactgttgcatgtagatcgttgccttctcttctgaagcggtcatgtgg 595
               ||||||||||||||| ||||  || || || ||||||||||||||||| || ||||||||
Sbjct: 3246174 cagggagattgtaacagttgtgtgcaggtcattgccttctcttctgaatcgctcatgtgg 3246115

                                   
Query: 596     tgctgtccgaatcctgaact 615
               |||||| || ||||| ||||
Sbjct: 3246114 tgctgttcggatcctaaact 3246095



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                        
Query: 480     accaaatggttgtcaagatgcttgaggttcttctcgaatccaaccagagcttggagc 536
               |||| ||| ||||| |||||||| | | |||||||||| || |||||||||||||||
Sbjct: 3246642 accatatgattgtccagatgcttaatggtcttctcgaagccgaccagagcttggagc 3246586
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>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05,
             complete sequence
          Length = 167317

 Score =  131 bits (66), Expect = 3e-27
 Identities = 120/138 (86%)
 Strand = Plus / Minus

                                                                         
Query: 320   cttcagcttggccttctggtcgtccgtcagagttttcgggaacaacacctcgaatgtcac 379
             ||||||||||| |||||||||||| || || ||||||||||| || |||||||| || ||
Sbjct: 40734 cttcagcttggacttctggtcgtcggttagggttttcgggaataaaacctcgaaagttac 40675

                                                                         
Query: 380   atacagatcgcctttcttgttgctttggtgcaatggcatgccctctcctttgaatttcct 439
             ||| || ||||||||||||||||| |||| ||||||||| || || |||||||| |||||
Sbjct: 40674 atataggtcgcctttcttgttgctctggtacaatggcattccttcccctttgaacttcct 40615

                               
Query: 440   tacctccttgggcttggt 457
              ||||||||||| |||||
Sbjct: 40614 aacctccttgggtttggt 40597



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                         
Query: 536   cagggagattgtaactgttgcatgtagatcgttgccttctcttctgaagcggtcatgtgg 595
             ||||||||||||||| ||||  || || || ||||||||||||||||| || ||||||||
Sbjct: 39998 cagggagattgtaacagttgtgtgcaggtcattgccttctcttctgaatcgctcatgtgg 39939

                                 
Query: 596   tgctgtccgaatcctgaact 615
             |||||| || ||||| ||||
Sbjct: 39938 tgctgttcggatcctaaact 39919



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                      
Query: 480   accaaatggttgtcaagatgcttgaggttcttctcgaatccaaccagagcttggagc 536
             |||| ||| ||||| |||||||| | | |||||||||| || |||||||||||||||
Sbjct: 40466 accatatgattgtccagatgcttaatggtcttctcgaagccgaccagagcttggagc 40410
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>gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
            clone KBrH001H24, complete sequence
          Length = 118144

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                        
Query: 558  tgtagatcgttgccttctcttctgaagcggtcatgtggtgctgt 601
            |||||||||||||| ||||| ||||| ||| |||||||||||||
Sbjct: 7379 tgtagatcgttgccatctctcctgaaccgggcatgtggtgctgt 7422
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>ref|NM_116125.2| Arabidopsis thaliana heat shock protein binding / unfolded protein
           binding AT3G62600 mRNA, complete cds
          Length = 1453

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 558 tgtagatcgttgccttctcttctgaagcggtcatgtggtgc 598
           |||||||||||||| || |||||||| ||| ||||||||||
Sbjct: 952 tgtagatcgttgccatcccttctgaaacgggcatgtggtgc 912
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>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9
          Length = 110257

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 558  tgtagatcgttgccttctcttctgaagcggtcatgtggtgc 598
            |||||||||||||| || |||||||| ||| ||||||||||
Sbjct: 4458 tgtagatcgttgccatcccttctgaaacgggcatgtggtgc 4498
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>gb|AY125534.1| Arabidopsis thaliana At3g62600/F26K9_30 mRNA, complete cds
          Length = 1041

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 558 tgtagatcgttgccttctcttctgaagcggtcatgtggtgc 598
           |||||||||||||| || |||||||| ||| ||||||||||
Sbjct: 788 tgtagatcgttgccatcccttctgaaacgggcatgtggtgc 748
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>gb|AY094429.1| Arabidopsis thaliana AT3g62600/F26K9_30 mRNA, complete cds
          Length = 1365

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 558 tgtagatcgttgccttctcttctgaagcggtcatgtggtgc 598
           |||||||||||||| || |||||||| ||| ||||||||||
Sbjct: 921 tgtagatcgttgccatcccttctgaaacgggcatgtggtgc 881
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>gb|AY087640.1| Arabidopsis thaliana clone 37292 mRNA, complete sequence
          Length = 1352

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 558 tgtagatcgttgccttctcttctgaagcggtcatgtggtgc 598
           |||||||||||||| || |||||||| ||| ||||||||||
Sbjct: 952 tgtagatcgttgccatcccttctgaaacgggcatgtggtgc 912
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>emb|AL096792.5|HS1067P23 Human DNA sequence from clone RP5-1067P23 on chromosome 20 Contains
             STSs and GSSs, complete sequence
          Length = 101342

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 147   aaaaattgagcagttaatattacc 170
             ||||||||||||||||||||||||
Sbjct: 22497 aaaaattgagcagttaatattacc 22520
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>gb|AC138595.10| Mus musculus chromosome 1, clone RP24-286D13, complete sequence
          Length = 172490

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 521   aaccagagcttggagcagggag 542
             ||||||||||||||||||||||
Sbjct: 82754 aaccagagcttggagcagggag 82775
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>gb|AF312994.1|AF312994 Mus musculus chromosome 1 clone MML, complete sequence
          Length = 228283

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 521    aaccagagcttggagcagggag 542
              ||||||||||||||||||||||
Sbjct: 171200 aaccagagcttggagcagggag 171221
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>emb|AJ297131.1|MMAJ2971 Mus musculus SIL, MAP_17, CYP_a, SCL & CYP_b genes
          Length = 234411

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 302   ttcttatgcaagaacatccttc 323
             ||||||||||||||||||||||
Sbjct: 98086 ttcttatgcaagaacatccttc 98107
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>emb|AL645473.12| Mouse DNA sequence from clone RP23-246H17 on chromosome 4, complete
            sequence
          Length = 162757

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 302  ttcttatgcaagaacatccttc 323
            ||||||||||||||||||||||
Sbjct: 4323 ttcttatgcaagaacatccttc 4344
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>emb|AL731651.1| Mouse DNA sequence from clone XX-PAC129 on chromosome 4, complete
             sequence
          Length = 147323

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 302   ttcttatgcaagaacatccttc 323
             ||||||||||||||||||||||
Sbjct: 11775 ttcttatgcaagaacatccttc 11796
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 326    cttggccttctggtcgtccgt 346
              |||||||||||||||||||||
Sbjct: 520626 cttggccttctggtcgtccgt 520646
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>emb|AL590444.1|CNS07EGB chromosome IV of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 218329

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 318    tccttcagcttggccttctgg 338
              |||||||||||||||||||||
Sbjct: 127945 tccttcagcttggccttctgg 127925
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>ref|XM_509721.1| PREDICTED: Pan troglodytes similar to hypothetical protein
            (LOC452647), mRNA
          Length = 6494

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 60   ccaggnagtacaaatattctggtacaa 86
            ||||| ||||||||||||| |||||||
Sbjct: 4497 ccaggaagtacaaatattcaggtacaa 4523
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>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 492    tcaagatgcttgaggttcttctcg 515
              ||||| ||||||||||||||||||
Sbjct: 393301 tcaaggtgcttgaggttcttctcg 393278
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 315     acatccttcagcttggcctt 334
               ||||||||||||||||||||
Sbjct: 2224693 acatccttcagcttggcctt 2224712
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>gb|AC135359.2| Mus musculus BAC clone RP24-209E17 from chromosome 5, complete sequence
          Length = 199822

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   aatactacagatctgttaaa 121
             ||||||||||||||||||||
Sbjct: 16007 aatactacagatctgttaaa 16026
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>gb|AC005105.3| Homo sapiens BAC clone CTA-491N20 from 7, complete sequence
          Length = 177206

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   gcaacaccattggtgcttct 222
             ||||||||||||||||||||
Sbjct: 99917 gcaacaccattggtgcttct 99898
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>emb|BX890590.11| Zebrafish DNA sequence from clone DKEY-15H19 in linkage group 3, complete
              sequence
          Length = 141661

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 525    agagcttggagcagggagat 544
              ||||||||||||||||||||
Sbjct: 117597 agagcttggagcagggagat 117616
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>ref|XM_567811.1| Cryptococcus neoformans var. neoformans JEC21 purine nucleotide
            binding protein (CNK01320) partial mRNA
          Length = 3163

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 492  tcaagatgcttgaggttcttctcg 515
            ||||| ||||||||||||||||||
Sbjct: 2289 tcaaggtgcttgaggttcttctcg 2266
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>gb|AC124720.3| Mus musculus BAC clone RP23-387F14 from chromosome 5, complete sequence
          Length = 193210

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   aatactacagatctgttaaa 121
             ||||||||||||||||||||
Sbjct: 43392 aatactacagatctgttaaa 43373
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>gb|AC145329.35| Medicago truncatula clone mth2-8i21, complete sequence
          Length = 123357

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 408   tgcaatggcatgccctctcctttgaatttcct 439
             ||||||||||| ||||| |||||||| |||||
Sbjct: 64965 tgcaatggcataccctcccctttgaacttcct 64996
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>emb|AL392087.7| Human DNA sequence from clone RP11-454H24 on chromosome 10 Contains part
              of a novel gene (KIAA0534), complete sequence
          Length = 193980

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 82     tacaaattcattgactttctaata 105
              |||||||||||||||||| |||||
Sbjct: 160303 tacaaattcattgactttataata 160326
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>emb|AL355795.13| Human DNA sequence from clone RP4-668G5 on chromosome 1p23.1-23.3
             Contains the 3' end of a novel gene, complete sequence
          Length = 146715

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   agttcttatgcaagaacatc 319
             ||||||||||||||||||||
Sbjct: 10094 agttcttatgcaagaacatc 10113
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>emb|AL157769.12| Human DNA sequence from clone RP11-484I6 on chromosome 13q32.3-33.3
             Contains 3 novel genes, the gene for endoplasmic reticulum
             resident protein 58 (MGC5302), the BIVM gene for basic,
             immunoglobulin-like variable motif containing, the ERCC5
             gene for excision repair cross-complementing rodent repair
             deficiency, complementation group 5 (xeroderma
             pigmentosum, complementation group G (Cockayne syndrome))
             and 3 CpG islands, complete sequence
          Length = 172052

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 60    ccaggnagtacaaatattctggtacaa 86
             ||||| ||||||||||||| |||||||
Sbjct: 30639 ccaggaagtacaaatattcaggtacaa 30613
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>gb|AC157769.3| Mus musculus chromosome 1, clone RP24-314L7, complete sequence
          Length = 131045

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 246    tttccttgaggtacacctcaaaca 269
              ||||||||| ||||||||||||||
Sbjct: 117583 tttccttgaagtacacctcaaaca 117606
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>gb|AC012558.9| Homo sapiens chromosome 10 clone RP11-174J11, complete sequence
          Length = 179391

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 235   tacttggaaaatttccttgaggta 258
             |||||||| |||||||||||||||
Sbjct: 46700 tacttggagaatttccttgaggta 46723
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>gb|AC099792.2| Homo sapiens chromosome 1 clone RP11-436K8, complete sequence
          Length = 207243

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 300    agttcttatgcaagaacatc 319
              ||||||||||||||||||||
Sbjct: 157636 agttcttatgcaagaacatc 157655
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>ref|XM_937552.1| PREDICTED: Homo sapiens similar to Temporarily Assigned Gene name
            family member (tag-58) (LOC648502), mRNA
          Length = 10502

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 60   ccaggnagtacaaatattctggtacaa 86
            ||||| ||||||||||||| |||||||
Sbjct: 4017 ccaggaagtacaaatattcaggtacaa 4043
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>ref|XM_062871.7| PREDICTED: Homo sapiens similar to Temporarily Assigned Gene name
            family member (tag-58) (LOC643677), mRNA
          Length = 10502

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 60   ccaggnagtacaaatattctggtacaa 86
            ||||| ||||||||||||| |||||||
Sbjct: 4017 ccaggaagtacaaatattcaggtacaa 4043
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>gb|AC138023.2| Homo sapiens chromosome 3 clone RP11-7G8, complete sequence
          Length = 153994

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 392   tttcttgttgctttggtgca 411
             ||||||||||||||||||||
Sbjct: 74250 tttcttgttgctttggtgca 74231
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>emb|BX004969.5| Zebrafish DNA sequence from clone CH211-89C12 in linkage group 7,
              complete sequence
          Length = 161142

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    gcaagctacttggaaaattt 248
              ||||||||||||||||||||
Sbjct: 111005 gcaagctacttggaaaattt 111024
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>emb|AL845516.8| Zebrafish DNA sequence from clone DKEY-43F11, complete sequence
          Length = 205826

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 229    gcaagctacttggaaaattt 248
              ||||||||||||||||||||
Sbjct: 133112 gcaagctacttggaaaattt 133093
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>gb|AC002526.1|AC002526 Human PAC clone RP4-558L21 from Xq23, complete sequence
          Length = 134580

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 392  tttcttgttgctttggtgca 411
            ||||||||||||||||||||
Sbjct: 5266 tttcttgttgctttggtgca 5247
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>emb|Z16559.1|HS095WC9 H. sapiens (D1S203) DNA segment containing (CA) repeat; clone
           AFM095wc9; single read
          Length = 196

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 agttcttatgcaagaacatc 319
           ||||||||||||||||||||
Sbjct: 121 agttcttatgcaagaacatc 140
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>gb|AC005873.3|AC005873 citb_15_o_21, complete sequence
          Length = 195653

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 82     tacaaattcattgactttctaata 105
              |||||||||||||||||| |||||
Sbjct: 154695 tacaaattcattgactttataata 154672
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>gb|AC154015.3| Mus musculus 6 BAC RP24-194J12 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 151119

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 396   ttgttgctttggtgcaatggcatg 419
             |||||||||||||||||| |||||
Sbjct: 47352 ttgttgctttggtgcaattgcatg 47375
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>emb|BX005402.7| Zebrafish DNA sequence from clone DKEY-237J11, complete sequence
          Length = 148726

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    ctacttggaaaatttccttg 253
              ||||||||||||||||||||
Sbjct: 124761 ctacttggaaaatttccttg 124742
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>gb|AC122860.5| Mus musculus BAC clone RP23-135A22 from 12, complete sequence
          Length = 233864

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 520    caaccagagcttggagcagg 539
              ||||||||||||||||||||
Sbjct: 132126 caaccagagcttggagcagg 132107
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>emb|AL772291.9| Mouse DNA sequence from clone RP23-395G1 on chromosome 4, complete
              sequence
          Length = 222046

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     aaattcattgactttctaat 104
              ||||||||||||||||||||
Sbjct: 167318 aaattcattgactttctaat 167299


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,404,308
Number of Sequences: 3902068
Number of extensions: 5404308
Number of successful extensions: 96588
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96421
Number of HSP's gapped (non-prelim): 164
length of query: 615
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 592
effective length of database: 17,143,297,704
effective search space: 10148832240768
effective search space used: 10148832240768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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