>Y4849_ARATH (P16128) Hypothetical protein At4g18490|
          Length = 594

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 14/84 (16%)
 Frame = -3

Query: 637 DISDLELPALLEDDGNVEKAEACRKQLEDM--------------CILMKKKHTEAKELAV 500
           ++++LE+P + E+  N+EKAEA  K+LE++              C ++KKKH EAKEL V
Sbjct: 512 NMANLEIP-ITENADNIEKAEAYTKELENVNRALFSIMNILNIICNILKKKHEEAKELLV 570

Query: 499 RAIVXXXXXXXXNHPMFEEKLSAL 428
           RA+V        NHP++E+++S L
Sbjct: 571 RAVVDNNKLLMLNHPLYEDQISFL 594

>MRP6_MOUSE (Q9R1S7) Multidrug resistance-associated protein 6 (ATP-binding|
           cassette sub-family C member 6)
          Length = 1498

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +2

Query: 266 YMLNPIYVLSLHLHYRCSSRMKHL 337
           ++L PIY+L +H H RC  RM HL
Sbjct: 51  WVLGPIYLLYIHRHGRCYLRMSHL 74

>POLY_DROME (P10401) Retrovirus-related Pol polyprotein from transposon gypsy|
           [Includes: Reverse transcriptase (EC 2.7.7.49);
           Endonuclease]
          Length = 1035

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 23/84 (27%), Positives = 39/84 (46%)
 Frame = +2

Query: 131 INPTTNSSTLQTAASYNRQEKYLYRSK*CDYICYSVISELRLSIKYMLNPIYVLSLHLHY 310
           +N   N   L+ A    ++   L+RSK    I ++  S L  ++K ++NP  V ++H   
Sbjct: 644 LNCFRNQIILEAARFPLKRNLVLFRSKSRHLISFTDKSWLLKTLKEVVNPDVVNAIHCDL 703

Query: 311 RCSSRMKHLLSHSTPASMSIHCDN 382
              +  +H L    PA+   HC N
Sbjct: 704 PTLASFQHDLIAHFPATQFRHCKN 727

>Y1678_PSEAE (Q9I347) Hypothetical adenine-specific methylase PA1678 (EC|
           2.1.1.72)
          Length = 304

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -3

Query: 655 IPWEMGDISDLELPALLEDDGNVEKAEACRKQLED 551
           +PWE   ISD  L   LEDD   E AE  R+++E+
Sbjct: 48  LPWE---ISDSYLDCRLEDDERAELAEILRRRIEE 79

>TOP1_TREPA (O83409) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase)
          Length = 731

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = -3

Query: 460 HPMFEEKLSALQKYADSMRSKHLFEEIVTMDTH*CGSTVGKKM 332
           +P F EK+S + K  +SMR   +F+E   +    CG T+ KK+
Sbjct: 562 YPAFSEKVSTVMKDLNSMRG--VFDEKTDVVCSQCGDTMVKKL 602

>DNAA_HAEIN (P43742) Chromosomal replication initiator protein dnaA|
          Length = 454

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -3

Query: 451 FEEKLSALQKYADSMRSKHLFEEIVTMDTH*CGSTVGKKMLHPGGTP 311
           F+ + SA  K+   + +KHLF+  V   ++     VG+K+    G P
Sbjct: 105 FQAESSASVKFESHLNTKHLFDNFVEGKSNQLARAVGQKLAQAPGEP 151


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,517,221
Number of Sequences: 219361
Number of extensions: 1760461
Number of successful extensions: 4412
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4398
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6856295237
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)