Clone Information

BLAST Search Result

Clone Name	rbags6g07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FBRL1_ARATH (Q9FEF8) Fibrillarin-1 (SKP1-interacting partner 7)	269	6e-72
2	FBRL2_ARATH (Q94AH9) Fibrillarin-2 (Fibrillarin-like protein)	265	6e-71
3	FBRL_DROER (Q8I1F4) Fibrillarin	240	3e-63
4	FBRL_DROME (Q9W1V3) Fibrillarin	239	6e-63
5	FBRL_XENLA (P22232) Fibrillarin	238	1e-62
6	FBRL_RAT (P22509) Fibrillarin (Nucleolar protein 1)	236	3e-62
7	FBRL_HUMAN (P22087) Fibrillarin (34 kDa nucleolar scleroderma an...	236	4e-62
8	FBRL_MOUSE (P35550) Fibrillarin (Nucleolar protein 1)	236	4e-62
9	FBRL_CAEEL (Q22053) Fibrillarin	226	5e-59
10	FBRL_TETTH (Q27200) Fibrillarin	218	9e-57
11	FBRL_SCHPO (P35551) Fibrillarin	211	1e-54
12	FBRL_LEIMA (P35549) Fibrillarin	211	1e-54
13	FBRL_CANGA (Q6FN88) Fibrillarin	209	7e-54
14	FBRL_ASHGO (Q756P0) Fibrillarin	208	9e-54
15	FBRL_YEAST (P15646) Fibrillarin (Nucleolar protein 1)	208	1e-53
16	FBRL_DEBHA (Q6BQ34) Fibrillarin	206	3e-53
17	FBRL3_ARATH (Q9FHB3) Putative fibrillarin-3	204	2e-52
18	FBRL_NEUCR (Q9HE26) Fibrillarin	202	8e-52
19	FBRL_ENCCU (Q8SR42) Fibrillarin	193	3e-49
20	FBRL_GIALA (Q24957) Fibrillarin	178	1e-44
21	FLPA_PYRKO (Q5JFN1) Fibrillarin-like pre-rRNA-processing protein	130	3e-30
22	FLPA_PYRFU (Q8U4M2) Fibrillarin-like pre-rRNA-processing protein	130	4e-30
23	FLPA_SULTO (Q971W2) Fibrillarin-like pre-rRNA-processing protein	128	1e-29
24	FLPA_PYRHO (O57811) Fibrillarin-like pre-rRNA-processing protein	128	2e-29
25	FLPA_PYRAB (Q9V2L5) Fibrillarin-like pre-rRNA-processing protein	127	2e-29
26	FLPA_AERPE (Q9Y9U3) Fibrillarin-like pre-rRNA-processing protein	127	3e-29
27	FLPA_METKA (Q8TXU9) Fibrillarin-like pre-rRNA-processing protein	127	3e-29
28	FLPA_METJA (Q58108) Fibrillarin-like pre-rRNA-processing protein	124	2e-28
29	FLPA_SULSO (P58032) Fibrillarin-like pre-rRNA-processing protein	124	3e-28
30	FLPA_PYRAE (Q8ZTI9) Fibrillarin-like pre-rRNA-processing protein	123	5e-28
31	FLPA_METVA (P35552) Fibrillarin-like pre-rRNA-processing protein	118	1e-26
32	FLPA_METMP (Q6LZM7) Fibrillarin-like pre-rRNA-processing protein	118	2e-26
33	FLPA_SULAC (Q9P9M0) Fibrillarin-like pre-rRNA-processing protein	117	2e-26
34	FLPA_METVO (P35553) Fibrillarin-like pre-rRNA-processing protein	117	3e-26
35	FLPA_METTH (O27283) Fibrillarin-like pre-rRNA-processing protein	115	1e-25
36	FLPA_METMA (O53133) Fibrillarin-like pre-rRNA-processing protein	114	3e-25
37	FLPA_METWO (Q9HH35) Fibrillarin-like pre-rRNA-processing protein	112	1e-24
38	FLPA_METAC (Q8TTT4) Fibrillarin-like pre-rRNA-processing protein	110	3e-24
39	FLPA_NANEQ (Q74N89) Fibrillarin-like pre-rRNA-processing protein	106	5e-23
40	FLPA_ARCFU (O28192) Fibrillarin-like pre-rRNA-processing protein	106	6e-23
41	FLPA_HALMA (Q5V3Q6) Fibrillarin-like pre-rRNA-processing protein	92	2e-18
42	FLPA_THEVO (Q979P2) Fibrillarin-like pre-rRNA-processing protein	86	7e-17
43	FLPA_THEAC (Q9HJL8) Fibrillarin-like pre-rRNA-processing protein	86	1e-16
44	FLPA_HALSA (Q9HQG3) Fibrillarin-like pre-rRNA-processing protein	79	8e-15
45	FLPA_PICTO (Q6KZQ5) Fibrillarin-like pre-rRNA-processing protein	67	4e-11
46	RRMJ_COXBU (Q83BY4) Ribosomal RNA large subunit methyltransferas...	31	3.3
47	YQBK_BACSU (P45927) Hypothetical protein yqbK	30	5.7
48	PROB_DESVH (Q72DJ9) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glut...	30	5.7
49	CRUM2_MOUSE (Q80YA8) Crumbs homolog 2 (Crumbs-like protein 2) (F...	30	7.4
50	LSPA_YERPE (Q8ZIL9) Lipoprotein signal peptidase (EC 3.4.23.36) ...	29	9.7

>FBRL1_ARATH (Q9FEF8) Fibrillarin-1 (SKP1-interacting partner 7)|
          Length = 308

 Score =  269 bits (687), Expect = 6e-72
 Identities = 133/145 (91%), Positives = 139/145 (95%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSD+VGP G VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS
Sbjct: 160 HVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 219

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQARILALNAS+FLK GGHFVISIKANCIDST AAEAVF SEV+KL+ +QFKP+E
Sbjct: 220 DVAQPDQARILALNASFFLKTGGHFVISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAE 279

Query: 257 QVTLEPFERDHACVVGGYRMPKKQK 183
           QVTLEPFERDHACVVGGYRMPKKQK
Sbjct: 280 QVTLEPFERDHACVVGGYRMPKKQK 304

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>FBRL2_ARATH (Q94AH9) Fibrillarin-2 (Fibrillarin-like protein)|
          Length = 320

 Score =  265 bits (678), Expect = 6e-71
 Identities = 131/145 (90%), Positives = 138/145 (95%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSD+VGP G VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS
Sbjct: 171 HVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 230

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQARILALNASYFLK+GGHFVISIKANCIDST  AEAVF +EV+KL+ +QFKP+E
Sbjct: 231 DVAQPDQARILALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAE 290

Query: 257 QVTLEPFERDHACVVGGYRMPKKQK 183
           QVTLEPFERDHACVVGGYRMPKK K
Sbjct: 291 QVTLEPFERDHACVVGGYRMPKKPK 315

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>FBRL_DROER (Q8I1F4) Fibrillarin|
          Length = 345

 Score =  240 bits (612), Expect = 3e-63
 Identities = 116/144 (80%), Positives = 130/144 (90%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSD+VGP GLVYAVEFSHRSGRDL+N+AKKRTN+IPIIEDARHP KYRMLVGMVD IF+
Sbjct: 202 HVSDVVGPEGLVYAVEFSHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFA 261

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQ RI+ALNA +FLKNGGHFVISIKA+CIDST   EAVFASEV+K++AD+ KP E
Sbjct: 262 DVAQPDQGRIVALNAQHFLKNGGHFVISIKASCIDSTAQPEAVFASEVKKMQADKLKPQE 321

Query: 257 QVTLEPFERDHACVVGGYRMPKKQ 186
           Q+TLEP+ERDHA VVG YR P KQ
Sbjct: 322 QLTLEPYERDHAVVVGVYRPPPKQ 345

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>FBRL_DROME (Q9W1V3) Fibrillarin|
          Length = 344

 Score =  239 bits (609), Expect = 6e-63
 Identities = 115/144 (79%), Positives = 130/144 (90%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSD+VGP GLVYAVEFSHRSGRDL+N+AKKRTN+IPIIEDARHP KYRMLVGMVD IF+
Sbjct: 201 HVSDVVGPEGLVYAVEFSHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFA 260

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQ RI+ALNA +FLKNGGHFVISIKA+CIDST   EAVFA+EV+K++AD+ KP E
Sbjct: 261 DVAQPDQGRIVALNAQHFLKNGGHFVISIKASCIDSTAQPEAVFAAEVKKMQADKLKPQE 320

Query: 257 QVTLEPFERDHACVVGGYRMPKKQ 186
           Q+TLEP+ERDHA VVG YR P KQ
Sbjct: 321 QLTLEPYERDHAVVVGVYRPPPKQ 344

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>FBRL_XENLA (P22232) Fibrillarin|
          Length = 323

 Score =  238 bits (606), Expect = 1e-62
 Identities = 114/145 (78%), Positives = 130/145 (89%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSD+VGP GLVYAVEFSHRSGRDL+N+AKKRTN+IP+IEDARHP KYR+LVGMVDV+F+
Sbjct: 178 HVSDVVGPEGLVYAVEFSHRSGRDLINVAKKRTNIIPVIEDARHPHKYRILVGMVDVVFA 237

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQ RI+ALNA  FLKNGGHFVISIKANCIDST A EAVFA+EV+K++ +  KP E
Sbjct: 238 DVAQPDQTRIVALNAHNFLKNGGHFVISIKANCIDSTAAPEAVFAAEVKKMQQENMKPQE 297

Query: 257 QVTLEPFERDHACVVGGYRMPKKQK 183
           Q+TLEP+ERDHA VVG YR P KQK
Sbjct: 298 QLTLEPYERDHAVVVGIYRPPPKQK 322

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>FBRL_RAT (P22509) Fibrillarin (Nucleolar protein 1)|
          Length = 327

 Score =  236 bits (603), Expect = 3e-62
 Identities = 114/145 (78%), Positives = 129/145 (88%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSDIVGP GLVYAVEFSHRSGRDL+N+AKKRTN+IP+IEDARHP KYRML+ MVDVIF+
Sbjct: 182 HVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFA 241

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQ RI+ALNA  FL+NGGHFVISIKANCIDST +AEAVFASEV+K++ +  KP E
Sbjct: 242 DVAQPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQE 301

Query: 257 QVTLEPFERDHACVVGGYRMPKKQK 183
           Q+TLEP+ERDHA VVG YR P K K
Sbjct: 302 QLTLEPYERDHAVVVGVYRPPPKAK 326

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>FBRL_HUMAN (P22087) Fibrillarin (34 kDa nucleolar scleroderma antigen)|
          Length = 321

 Score =  236 bits (602), Expect = 4e-62
 Identities = 114/145 (78%), Positives = 129/145 (88%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSDIVGP GLVYAVEFSHRSGRDL+N+AKKRTN+IP+IEDARHP KYRML+ MVDVIF+
Sbjct: 176 HVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFA 235

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQ RI+ALNA  FL+NGGHFVISIKANCIDST +AEAVFASEV+K++ +  KP E
Sbjct: 236 DVAQPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQE 295

Query: 257 QVTLEPFERDHACVVGGYRMPKKQK 183
           Q+TLEP+ERDHA VVG YR P K K
Sbjct: 296 QLTLEPYERDHAVVVGVYRPPPKVK 320

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>FBRL_MOUSE (P35550) Fibrillarin (Nucleolar protein 1)|
          Length = 327

 Score =  236 bits (602), Expect = 4e-62
 Identities = 114/145 (78%), Positives = 129/145 (88%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSDIVGP GLVYAVEFSHRSGRDL+N+AKKRTN+IP+IEDARHP KYRML+ MVDVIF+
Sbjct: 182 HVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFA 241

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQ RI+ALNA  FL+NGGHFVISIKANCIDST +AEAVFASEV+K++ +  KP E
Sbjct: 242 DVAQPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQE 301

Query: 257 QVTLEPFERDHACVVGGYRMPKKQK 183
           Q+TLEP+ERDHA VVG YR P K K
Sbjct: 302 QLTLEPYERDHAVVVGVYRPPPKVK 326

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>FBRL_CAEEL (Q22053) Fibrillarin|
          Length = 352

 Score =  226 bits (575), Expect = 5e-59
 Identities = 112/145 (77%), Positives = 124/145 (85%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           H SD+VGP G+VYAVEFSHRSGRDL+ +AKKR NV+PI+EDARHP KYRMLVGMVDVIFS
Sbjct: 207 HCSDVVGPEGIVYAVEFSHRSGRDLLGVAKKRPNVVPIVEDARHPHKYRMLVGMVDVIFS 266

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQARI+ALNA  FL+NGGH VISIKANCIDST   EAVFA EV KLK ++FKP E
Sbjct: 267 DVAQPDQARIVALNAQNFLRNGGHAVISIKANCIDSTAEPEAVFAGEVNKLKEEKFKPLE 326

Query: 257 QVTLEPFERDHACVVGGYRMPKKQK 183
           QVTLEP+ERDHA VV  YR  K +K
Sbjct: 327 QVTLEPYERDHAVVVAVYRPVKGKK 351

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>FBRL_TETTH (Q27200) Fibrillarin|
          Length = 294

 Score =  218 bits (556), Expect = 9e-57
 Identities = 104/139 (74%), Positives = 120/139 (86%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HV+DIVGPTG+VYAVEFSHRSGRDLVNMAKKRTNV+PII DAR P +YR LVGMVDV+F+
Sbjct: 155 HVADIVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVVPIIGDARKPQEYRFLVGMVDVVFA 214

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQARI+ +N  YFLKNGGHF+ISIKA CIDST     VFA+EV+KLK +  KP +
Sbjct: 215 DVAQPDQARIMGMNCQYFLKNGGHFLISIKACCIDSTNEPAVVFAAEVQKLKEEGLKPEQ 274

Query: 257 QVTLEPFERDHACVVGGYR 201
           Q+TLEP+ERDHA V+G YR
Sbjct: 275 QLTLEPYERDHAMVLGSYR 293

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>FBRL_SCHPO (P35551) Fibrillarin|
          Length = 305

 Score =  211 bits (538), Expect = 1e-54
 Identities = 102/138 (73%), Positives = 120/138 (86%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HV+D+VGP GLVYAVEFSHRSGRDL+NMAKKRTNVIPI+EDARH  KYRMLVGMVDV+F+
Sbjct: 164 HVADVVGPEGLVYAVEFSHRSGRDLLNMAKKRTNVIPIVEDARHVQKYRMLVGMVDVVFA 223

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQARI+ALNA+ FLKN G  VIS+KA+CIDST  A  VFA EV+K++ ++ KP E
Sbjct: 224 DVAQPDQARIVALNAAAFLKNEGGVVISVKASCIDSTADAAVVFAREVKKMQEEKIKPQE 283

Query: 257 QVTLEPFERDHACVVGGY 204
           Q+TLEP+ERDH  +VG Y
Sbjct: 284 QLTLEPYERDHCIIVGKY 301

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>FBRL_LEIMA (P35549) Fibrillarin|
          Length = 297

 Score =  211 bits (537), Expect = 1e-54
 Identities = 107/145 (73%), Positives = 120/145 (82%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSD+VGP G+VYAVEFSHR GRDLV M+K+R  ++PI+EDAR+P KYRMLV MVD IF 
Sbjct: 153 HVSDLVGPEGMVYAVEFSHRVGRDLVEMSKRRP-IVPIVEDARYPMKYRMLVPMVDCIFM 211

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQARILALNA  FL+NGGH+VISIKANCIDST  A  V ASE+ KLK D+ KP E
Sbjct: 212 DVAQPDQARILALNAQAFLQNGGHYVISIKANCIDSTLEAPVVIASELNKLKKDKLKPLE 271

Query: 257 QVTLEPFERDHACVVGGYRMPKKQK 183
           QV+LEPFERDHA VVG YR  KK K
Sbjct: 272 QVSLEPFERDHAVVVGVYRPVKKSK 296

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>FBRL_CANGA (Q6FN88) Fibrillarin|
          Length = 323

 Score =  209 bits (531), Expect = 7e-54
 Identities = 101/138 (73%), Positives = 118/138 (85%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSD+VGP G+VYAVEFSHR GR+L++MAKKR NVIPIIEDARHP KYRMLVGMVD +F+
Sbjct: 179 HVSDVVGPEGVVYAVEFSHRPGRELISMAKKRPNVIPIIEDARHPQKYRMLVGMVDAVFA 238

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQARI+ALN+  FLK+ G  VISIKANCIDST  AE VFA EV+KL+ ++ KP E
Sbjct: 239 DVAQPDQARIIALNSHMFLKDQGGVVISIKANCIDSTVDAETVFAREVQKLREEKIKPLE 298

Query: 257 QVTLEPFERDHACVVGGY 204
           Q+TLEP+ERDH  V+G Y
Sbjct: 299 QLTLEPYERDHCIVIGRY 316

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>FBRL_ASHGO (Q756P0) Fibrillarin|
          Length = 326

 Score =  208 bits (530), Expect = 9e-54
 Identities = 100/138 (72%), Positives = 118/138 (85%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HV+D+VGP GLVYAVEFSHR GR+L++MAKKR NVIPIIEDARHP KYRML+GMVD +F+
Sbjct: 184 HVADVVGPEGLVYAVEFSHRPGRELISMAKKRPNVIPIIEDARHPQKYRMLIGMVDAVFA 243

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQARI+ALN+  FLK+ G  VISIKANCIDST  AE VFA EV+KL+ ++ KP E
Sbjct: 244 DVAQPDQARIIALNSHMFLKDQGGVVISIKANCIDSTVDAETVFAREVQKLREEKIKPLE 303

Query: 257 QVTLEPFERDHACVVGGY 204
           Q+TLEP+ERDH  V+G Y
Sbjct: 304 QLTLEPYERDHCIVIGRY 321

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>FBRL_YEAST (P15646) Fibrillarin (Nucleolar protein 1)|
          Length = 327

 Score =  208 bits (529), Expect = 1e-53
 Identities = 100/138 (72%), Positives = 118/138 (85%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSD+VGP G+VYAVEFSHR GR+L++MAKKR N+IPIIEDARHP KYRML+GMVD +F+
Sbjct: 183 HVSDVVGPEGVVYAVEFSHRPGRELISMAKKRPNIIPIIEDARHPQKYRMLIGMVDCVFA 242

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQARI+ALN+  FLK+ G  VISIKANCIDST  AE VFA EV+KL+ ++ KP E
Sbjct: 243 DVAQPDQARIIALNSHMFLKDQGGVVISIKANCIDSTVDAETVFAREVQKLREERIKPLE 302

Query: 257 QVTLEPFERDHACVVGGY 204
           Q+TLEP+ERDH  VVG Y
Sbjct: 303 QLTLEPYERDHCIVVGRY 320

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>FBRL_DEBHA (Q6BQ34) Fibrillarin|
          Length = 329

 Score =  206 bits (525), Expect = 3e-53
 Identities = 99/138 (71%), Positives = 117/138 (84%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HV+D+VGP G+VYAVEFSHR GR+L+ MAKKR NVIPII+DARHP KYRML+GMVD +F+
Sbjct: 185 HVADVVGPEGMVYAVEFSHRPGRELIGMAKKRPNVIPIIDDARHPQKYRMLIGMVDAVFA 244

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQARI+ALN+  FLK+ G  VISIKANCIDST  AE VFA EV+KL+ ++ KP E
Sbjct: 245 DVAQPDQARIIALNSHLFLKDQGTVVISIKANCIDSTVDAETVFAREVQKLREERIKPLE 304

Query: 257 QVTLEPFERDHACVVGGY 204
           Q+TLEP+ERDH  VVG Y
Sbjct: 305 QLTLEPYERDHCIVVGRY 322

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>FBRL3_ARATH (Q9FHB3) Putative fibrillarin-3|
          Length = 292

 Score =  204 bits (518), Expect = 2e-52
 Identities = 101/143 (70%), Positives = 119/143 (83%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSDIVGP G VYAVE S   G+ L+NMA+KRTNVIPIIEDARHPAKYRMLVGMVD+IFS
Sbjct: 150 HVSDIVGPEGCVYAVEHSDICGKVLMNMAEKRTNVIPIIEDARHPAKYRMLVGMVDIIFS 209

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DV  P+QA IL+LNASYFLK+GGHF+ISIKAN IDST AAE V+  EVEKL+ ++ +P+E
Sbjct: 210 DVNHPEQANILSLNASYFLKSGGHFMISIKANSIDSTIAAETVYQMEVEKLQMEELRPTE 269

Query: 257 QVTLEPFERDHACVVGGYRMPKK 189
            + L+  E  HACV GGYR+P+K
Sbjct: 270 ILHLDSCEEKHACVFGGYRLPRK 292

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>FBRL_NEUCR (Q9HE26) Fibrillarin|
          Length = 323

 Score =  202 bits (513), Expect = 8e-52
 Identities = 99/134 (73%), Positives = 114/134 (85%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HV+DIVGPTG VYAVEFSHRSGRDL+NMA +RTNVIPI+EDAR P  YRML+ MVDVIF+
Sbjct: 178 HVADIVGPTGSVYAVEFSHRSGRDLINMATRRTNVIPIVEDARKPMAYRMLLPMVDVIFA 237

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQARI+ +NA  FLK GG  +ISIKA+CIDST   E VFASEV+KL+ D+F P E
Sbjct: 238 DVAQPDQARIVGINAKLFLKQGGGLLISIKASCIDSTAPPEQVFASEVQKLREDKFFPKE 297

Query: 257 QVTLEPFERDHACV 216
           Q+TLEP+ERDHA V
Sbjct: 298 QLTLEPYERDHAMV 311

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>FBRL_ENCCU (Q8SR42) Fibrillarin|
          Length = 291

 Score =  193 bits (491), Expect = 3e-49
 Identities = 91/145 (62%), Positives = 116/145 (80%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSDIVG  G+VYAVEFS RSGRDL+NM+ KR N++PIIEDAR+P++YRMLV +VD IFS
Sbjct: 138 HVSDIVGKDGVVYAVEFSERSGRDLINMSMKRPNIVPIIEDARYPSRYRMLVPIVDCIFS 197

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DV+QPDQ RI+ALNA YFLK GG   +SIKANC++S   AE VFA EV  L+ +  +P E
Sbjct: 198 DVSQPDQTRIVALNAQYFLKEGGGVDVSIKANCVNSAVPAETVFADEVNILRKNSIRPKE 257

Query: 257 QVTLEPFERDHACVVGGYRMPKKQK 183
           QVTLEPFE+DHA ++G +++   ++
Sbjct: 258 QVTLEPFEKDHAMIIGRFKLSASEE 282

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>FBRL_GIALA (Q24957) Fibrillarin|
          Length = 327

 Score =  178 bits (452), Expect = 1e-44
 Identities = 92/140 (65%), Positives = 107/140 (76%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSDIVGPTG VYAVEFS RSGRDL+ +AK RTNV PII DARHP KYRM+V  VD IFS
Sbjct: 185 HVSDIVGPTGAVYAVEFSQRSGRDLLEVAKARTNVYPIIADARHPYKYRMIVPEVDCIFS 244

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQARI+A NA Y+LK  G  +ISIKA+ +DST   EAVFA E+E L+   FK  E
Sbjct: 245 DVAQPDQARIVAENARYYLKANGGMLISIKASSVDSTLKPEAVFAREIETLREHDFKCKE 304

Query: 257 QVTLEPFERDHACVVGGYRM 198
           Q+ +  F R+HA VVG +R+
Sbjct: 305 QLDIGEFHRNHAIVVGRFRV 324

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>FLPA_PYRKO (Q5JFN1) Fibrillarin-like pre-rRNA-processing protein|
          Length = 226

 Score =  130 bits (327), Expect = 3e-30
 Identities = 71/135 (52%), Positives = 94/135 (69%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSDIVG  G V+ VEFS R  R+LV + ++R N++PI+ DA  P  YR LV  VDVIF 
Sbjct: 89  HVSDIVGWEGKVFGVEFSPRVLRELVPLVEERRNIVPILGDATKPEGYRALVPKVDVIFE 148

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQP QA+IL  NA  +LK+GG+ +IS+K+  ID T+  E VF  EVEK  +  F+  E
Sbjct: 149 DVAQPTQAKILIDNAKVYLKSGGYGMISVKSRSIDVTKEPEQVF-KEVEKELSTYFEVVE 207

Query: 257 QVTLEPFERDHACVV 213
           +++LEP+E+DHA  V
Sbjct: 208 RLSLEPYEKDHALFV 222

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>FLPA_PYRFU (Q8U4M2) Fibrillarin-like pre-rRNA-processing protein|
          Length = 227

 Score =  130 bits (326), Expect = 4e-30
 Identities = 69/135 (51%), Positives = 94/135 (69%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSDIVG  G +Y +EFS R  R+LV + ++R N+IPI+ DA  P +YR LV  VDVIF 
Sbjct: 90  HVSDIVGWEGKIYGIEFSPRVLRELVPIVEERRNIIPILGDATKPEEYRALVTKVDVIFE 149

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQP QA+IL  NA  +LK GG+ +I++K+  ID T+  E VF  EVE+  ++ F+  E
Sbjct: 150 DVAQPTQAKILIDNAKAYLKRGGYGMIAVKSRSIDVTKEPEQVF-KEVERELSEYFEVIE 208

Query: 257 QVTLEPFERDHACVV 213
           ++ LEP+E+DHA  V
Sbjct: 209 RLNLEPYEKDHALFV 223

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>FLPA_SULTO (Q971W2) Fibrillarin-like pre-rRNA-processing protein|
          Length = 233

 Score =  128 bits (322), Expect = 1e-29
 Identities = 64/139 (46%), Positives = 91/139 (65%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSDIV   G VY VEFS R  R+ + +A+ R N+ PI+ DAR P  YR LV  VDV++ 
Sbjct: 93  HVSDIVELEGKVYGVEFSPRVVREFLLVAQHRPNLFPILADARFPQYYRTLVEDVDVLYV 152

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           D+AQPD+  I   NA +FLKNGG+ +++IKA  ID T+    ++  EV KLK + F   +
Sbjct: 153 DIAQPDETDIAIYNAKFFLKNGGYMMMAIKARSIDVTKEPTEIYEMEVNKLKENNFDVIQ 212

Query: 257 QVTLEPFERDHACVVGGYR 201
            + L+P+++DHA V+  Y+
Sbjct: 213 VIQLDPYDKDHAMVLAKYK 231

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>FLPA_PYRHO (O57811) Fibrillarin-like pre-rRNA-processing protein|
          Length = 227

 Score =  128 bits (321), Expect = 2e-29
 Identities = 67/135 (49%), Positives = 94/135 (69%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSDIVG  G ++ +EFS R  R+LV + ++R N++PI+ DA  P +YR LV  VDVIF 
Sbjct: 90  HVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE 149

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQP QA+IL  NA  +LK GG+ +I++K+  ID T+  E VF  EVE+  ++ F+  E
Sbjct: 150 DVAQPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVF-REVERELSEYFEVIE 208

Query: 257 QVTLEPFERDHACVV 213
           ++ LEP+E+DHA  V
Sbjct: 209 RLNLEPYEKDHALFV 223

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>FLPA_PYRAB (Q9V2L5) Fibrillarin-like pre-rRNA-processing protein|
          Length = 227

 Score =  127 bits (320), Expect = 2e-29
 Identities = 66/135 (48%), Positives = 93/135 (68%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSD++G  G ++ +EFS R  R+LV + + R N++PI+ DA  P +YR LV  VDVIF 
Sbjct: 90  HVSDVIGWEGKIFGIEFSPRVLRELVPIVEDRKNIVPILGDATKPEEYRALVPKVDVIFE 149

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQP QA+IL  NA  +LK GG+ +I++K+  ID T+  E VF  EVEK  ++ F+  E
Sbjct: 150 DVAQPTQAKILIDNAEVYLKKGGYGMIAVKSRSIDVTKEPEQVF-REVEKELSEYFEVIE 208

Query: 257 QVTLEPFERDHACVV 213
           ++ LEP+E+DHA  V
Sbjct: 209 RLNLEPYEKDHALFV 223

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>FLPA_AERPE (Q9Y9U3) Fibrillarin-like pre-rRNA-processing protein|
          Length = 233

 Score =  127 bits (318), Expect = 3e-29
 Identities = 61/134 (45%), Positives = 90/134 (67%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           H+SDI+GP G +Y VEF+ R  RDL+ + + R N+ PI+ DAR P KYR LV  VD +++
Sbjct: 94  HMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYA 153

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQP+QA I+  NA +FL++GG+ +++IKA  ID T     V+  E++ L     +  +
Sbjct: 154 DVAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKD 213

Query: 257 QVTLEPFERDHACV 216
            V L+PF+RDHA +
Sbjct: 214 VVHLDPFDRDHAMI 227

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>FLPA_METKA (Q8TXU9) Fibrillarin-like pre-rRNA-processing protein|
          Length = 232

 Score =  127 bits (318), Expect = 3e-29
 Identities = 64/138 (46%), Positives = 90/138 (65%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSDI+  +G+ Y VEF+ R  ++L+ + +KR N+IPI+ DA  P  Y  LV  VDVI+ 
Sbjct: 93  HVSDIIKESGVEYCVEFASRMMQELIPVCEKRPNMIPILGDATKPHGYAPLVEQVDVIYQ 152

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           D+AQP QA ++A NA  FL+ GG+ +++IKA  ID T+  E VF  E  KL+   F+  E
Sbjct: 153 DIAQPKQAEVVADNAEAFLRPGGYVIVAIKARSIDVTKEPEEVFEDEERKLEERGFEVLE 212

Query: 257 QVTLEPFERDHACVVGGY 204
            + LEP+ERDH  +V  Y
Sbjct: 213 VIDLEPYERDHVGIVAEY 230

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>FLPA_METJA (Q58108) Fibrillarin-like pre-rRNA-processing protein|
          Length = 230

 Score =  124 bits (312), Expect = 2e-28
 Identities = 64/136 (47%), Positives = 92/136 (67%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HV+DI    G+VYA+E++ R  R+L++   +R N+IPI+ DA  P +Y  +V  VDVI+ 
Sbjct: 91  HVADIADK-GIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYE 149

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQP+QA IL  NA +FLK GG+ +I+IKA  ID T+  + +F  + E L+A  FK  +
Sbjct: 150 DVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKEILEAGGFKIVD 209

Query: 257 QVTLEPFERDHACVVG 210
           +V +EPFE+DH   VG
Sbjct: 210 EVDIEPFEKDHVMFVG 225

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>FLPA_SULSO (P58032) Fibrillarin-like pre-rRNA-processing protein|
          Length = 232

 Score =  124 bits (310), Expect = 3e-28
 Identities = 59/139 (42%), Positives = 91/139 (65%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSDI+   G  Y VEFS R  R+L+ +A++R N+ P++ DAR P  Y+ +V  VDV++ 
Sbjct: 93  HVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYV 152

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           D+AQPDQ  I   NA +FLK  G  ++ IKA  ID T+  + ++ +EVEKL+   F+  +
Sbjct: 153 DIAQPDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQ 212

Query: 257 QVTLEPFERDHACVVGGYR 201
            + L+P+++DHA V+  Y+
Sbjct: 213 IINLDPYDKDHAIVLSKYK 231

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>FLPA_PYRAE (Q8ZTI9) Fibrillarin-like pre-rRNA-processing protein|
          Length = 235

 Score =  123 bits (308), Expect = 5e-28
 Identities = 69/141 (48%), Positives = 88/141 (62%), Gaps = 2/141 (1%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVN--MAKKRTNVIPIIEDARHPAKYRMLVGMVDVI 444
           H+SDIVG  GL+Y+VEFS R  R+ +   + + R NV+PI+ DAR P +Y   V  VDV+
Sbjct: 95  HISDIVGENGLIYSVEFSPRVFREFMEKLVDQGRRNVVPILGDARFPYQYAHYVKGVDVV 154

Query: 443 FSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKP 264
           + DVAQP QA+ILA NA YFLK GGH ++ IKA  ID T  A   F  E+  LK   F  
Sbjct: 155 YIDVAQPAQAKILADNADYFLKPGGHVMLVIKAMSIDVTAPATETFKQEINTLKERGFDI 214

Query: 263 SEQVTLEPFERDHACVVGGYR 201
            E V LEP++  HA V+   R
Sbjct: 215 LETVHLEPYDTAHAMVIAKKR 235

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>FLPA_METVA (P35552) Fibrillarin-like pre-rRNA-processing protein|
          Length = 230

 Score =  118 bits (296), Expect = 1e-26
 Identities = 63/136 (46%), Positives = 87/136 (63%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSDI   T +VYAVEF+ R  R+ ++   +R N+IPI+ DA  P +Y  +VG VDVIF 
Sbjct: 91  HVSDISEDT-IVYAVEFAPRIMREFIDSCNERINLIPILGDANRPFEYSNIVGKVDVIFE 149

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQP+QA IL  NA +FL   G+ +ISIKA  ID T+  + +F  + + L    F   +
Sbjct: 150 DVAQPNQAEILVKNAKWFLNKDGYAMISIKARSIDVTKNPKEIFLEQKKILIEGGFDIVD 209

Query: 257 QVTLEPFERDHACVVG 210
           ++ +EPFE+DH   VG
Sbjct: 210 EINIEPFEKDHIMFVG 225

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>FLPA_METMP (Q6LZM7) Fibrillarin-like pre-rRNA-processing protein|
          Length = 230

 Score =  118 bits (295), Expect = 2e-26
 Identities = 61/136 (44%), Positives = 87/136 (63%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HV+DI     LVYA+EF+ R  R+ ++   +R N+IP++ DA  P  Y  +V  VDVIF 
Sbjct: 91  HVADIA-ENSLVYALEFAPRIMREFIDSCNERKNLIPVLGDANRPQDYSNIVEKVDVIFE 149

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQP+QA IL  NA +FLK  G+ +ISIKA  +D T+    +FA + + L    F+  +
Sbjct: 150 DVAQPNQAEILVKNAKWFLKENGYAMISIKARSVDVTKNPREIFAEQKKILIEGGFEIVD 209

Query: 257 QVTLEPFERDHACVVG 210
           +V +EPFE+DH  +VG
Sbjct: 210 EVNIEPFEKDHMMMVG 225

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>FLPA_SULAC (Q9P9M0) Fibrillarin-like pre-rRNA-processing protein|
          Length = 231

 Score =  117 bits (294), Expect = 2e-26
 Identities = 58/139 (41%), Positives = 91/139 (65%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           H+SDIV   G VY+VEFS R  R+L+ +A+ R N+ PI+ DAR P  Y+ LV  VD+++ 
Sbjct: 93  HISDIVELQGKVYSVEFSPRVIRELLLVAQYRPNMFPILADARFPQYYKSLVENVDIVYV 152

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           D+AQP++  I   NA +FLK  G+ +I+IK+  ID T+    ++ +E +KL+   F   E
Sbjct: 153 DIAQPNETEIAMYNARFFLKKNGYMMIAIKSRSIDVTKDPREIYNAEAKKLEDAGFDIRE 212

Query: 257 QVTLEPFERDHACVVGGYR 201
            + L+P+++DHA +V  Y+
Sbjct: 213 VLELDPYDKDHAMIVVKYK 231

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>FLPA_METVO (P35553) Fibrillarin-like pre-rRNA-processing protein|
          Length = 228

 Score =  117 bits (293), Expect = 3e-26
 Identities = 60/136 (44%), Positives = 87/136 (63%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HV+D+   +  VYAVEF+ R  R+ +   + R N+ PI+ DA  P +Y  +V  VDVIF 
Sbjct: 89  HVADVAEDSP-VYAVEFAPRIMREFIESCEGRKNLFPILGDANKPEEYANIVEKVDVIFE 147

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQP+QA IL  NA +FLK GG+ +ISIKA  +D T+    +F ++ E ++ + FK  +
Sbjct: 148 DVAQPNQAEILIKNAKWFLKKGGYGMISIKARSVDVTENPRVIFEAQKEIMEQNGFKIVD 207

Query: 257 QVTLEPFERDHACVVG 210
            + +EPFE+DH   VG
Sbjct: 208 AINIEPFEKDHMLFVG 223

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>FLPA_METTH (O27283) Fibrillarin-like pre-rRNA-processing protein|
          Length = 224

 Score =  115 bits (287), Expect = 1e-25
 Identities = 58/135 (42%), Positives = 84/135 (62%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           H+SDIV   G VY +EFS R  R+L+ + + R N+ P++EDA  P  Y  +V   D+++ 
Sbjct: 86  HISDIV-TDGRVYCIEFSPRMMRELLGVCESRKNMAPLLEDASRPLSYLRMVEAADLVYC 144

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQ R+   N   FLK  G+ +I IKA  ID T++   +F  EV KL++  F+  +
Sbjct: 145 DVAQPDQTRLFIENMDCFLKRDGYGLIMIKARSIDVTRSPRKIFREEVGKLESSGFRIID 204

Query: 257 QVTLEPFERDHACVV 213
           QV L P+E+DH  V+
Sbjct: 205 QVGLNPYEKDHMAVL 219

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>FLPA_METMA (O53133) Fibrillarin-like pre-rRNA-processing protein|
          Length = 227

 Score =  114 bits (284), Expect = 3e-25
 Identities = 65/139 (46%), Positives = 87/139 (62%), Gaps = 4/139 (2%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSDIV   G VY+VEF+ RS RD + +A +R N+ PI+ DA  P  Y  +V  VDVIF 
Sbjct: 86  HVSDIVSE-GAVYSVEFAPRSMRDFIGLASRRKNIFPILADAGKPDSYAHIVEPVDVIFQ 144

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQP+QA I A NA  FLK  G+ ++SIKA  ID+  + + +F  EV+KL+   F+P  
Sbjct: 145 DVAQPNQAEIAARNAVRFLKKDGYLLLSIKARSIDTAASPKEIFKEEVKKLE-QAFEPGF 203

Query: 257 QV----TLEPFERDHACVV 213
           +V     L P+  DH  V+
Sbjct: 204 EVLTARELMPYHEDHLGVM 222

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>FLPA_METWO (Q9HH35) Fibrillarin-like pre-rRNA-processing protein|
          Length = 222

 Score =  112 bits (279), Expect = 1e-24
 Identities = 55/135 (40%), Positives = 84/135 (62%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           H+SDIV   G VY VEFS R  R+L+ + + R N++P++EDA  P  Y  +V   D+++ 
Sbjct: 84  HISDIV-TMGRVYCVEFSPRMMRELIEVCRVRGNMVPLLEDASRPLDYMRMVENADLVYC 142

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQPDQ  +   N   FLK+ G+ +I +KA  ID T++   +F  E  KL+   F+  +
Sbjct: 143 DVAQPDQTGLFIRNMDCFLKDDGYGLIMVKARSIDVTRSPRKIFREEAGKLRDSGFRIID 202

Query: 257 QVTLEPFERDHACVV 213
           QV L+P+E+DH  ++
Sbjct: 203 QVGLKPYEKDHMAIL 217

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>FLPA_METAC (Q8TTT4) Fibrillarin-like pre-rRNA-processing protein|
          Length = 227

 Score =  110 bits (276), Expect = 3e-24
 Identities = 61/139 (43%), Positives = 86/139 (61%), Gaps = 4/139 (2%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSDI    G VY+VEF+ RS RD + +A +R N+ PI+ DA  P  Y  +V  VD+IF 
Sbjct: 86  HVSDIASE-GAVYSVEFASRSMRDFIRLASRRKNIFPILADAGKPDSYAHIVEPVDLIFQ 144

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQP+QA I A NA+ FL   G+ ++SIKA  ID+  + + +F  EV+KL+   F+P  
Sbjct: 145 DVAQPNQAEIAARNAARFLNKNGYLLLSIKARSIDTAASPKEIFKEEVKKLE-QAFEPGF 203

Query: 257 QV----TLEPFERDHACVV 213
           ++     L P+  DH  V+
Sbjct: 204 EILTARDLMPYHEDHLGVL 222

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>FLPA_NANEQ (Q74N89) Fibrillarin-like pre-rRNA-processing protein|
          Length = 232

 Score =  106 bits (265), Expect = 5e-23
 Identities = 53/142 (37%), Positives = 84/142 (59%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           H+SDI+G  G+++ VEF+ R  R+L+ +AKKR N++PI+ DA  P  Y+ +V   DVI+ 
Sbjct: 91  HISDIIGEEGIIFGVEFAPRVLRELMFVAKKRKNIVPILADANQPETYQHIVVQSDVIYQ 150

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVAQP Q  I   N  +F K      +++KA  ID T+  + +F     KL+  + +  E
Sbjct: 151 DVAQPHQVEIFLKNLRFFAKPNAIGFLAVKARSIDVTKDPKVIFREVERKLREAKLQLLE 210

Query: 257 QVTLEPFERDHACVVGGYRMPK 192
            + L+P+ +DH   V   ++PK
Sbjct: 211 SIRLDPYHKDHMMFV--VKVPK 230

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>FLPA_ARCFU (O28192) Fibrillarin-like pre-rRNA-processing protein|
          Length = 210

 Score =  106 bits (264), Expect = 6e-23
 Identities = 56/131 (42%), Positives = 84/131 (64%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           H++DIV   G++YAVE+S +    L+ + ++R N+IP++ DA  P KY  +V  VD+I+ 
Sbjct: 74  HLADIVDE-GIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQ 132

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           D+AQ +Q  IL  NA +FLK  G  VI +KA  IDST   E VF S +++++ D FK  +
Sbjct: 133 DIAQKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVK 191

Query: 257 QVTLEPFERDH 225
             +L P+ RDH
Sbjct: 192 HGSLMPYHRDH 202

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>FLPA_HALMA (Q5V3Q6) Fibrillarin-like pre-rRNA-processing protein|
          Length = 210

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 55/135 (40%), Positives = 79/135 (58%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HV+D  GPT   YAVEF+ R  R+L++ A+ R N+ P+++DAR P  Y  +V  VDV+  
Sbjct: 75  HVADFGGPT---YAVEFAPRPVRELLDAAESRRNLFPLLKDARKPESYAHVVEPVDVVVQ 131

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           DVA   QAR+  LN   FL + G  + +IKA   D T   +AVF S   +L A +++  E
Sbjct: 132 DVATRGQARVATLN-KQFLTDDGRLLAAIKARSEDVTADPDAVFDSVRAELSA-EYELLE 189

Query: 257 QVTLEPFERDHACVV 213
              L+P+  DH  +V
Sbjct: 190 TARLDPYHEDHLGIV 204

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>FLPA_THEVO (Q979P2) Fibrillarin-like pre-rRNA-processing protein|
          Length = 222

 Score = 86.3 bits (212), Expect = 7e-17
 Identities = 45/131 (34%), Positives = 77/131 (58%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           H+SDI  P G +Y VE S+     L+++AKKR N+ PI+EDA  P KY   +  VDV++ 
Sbjct: 90  HISDIC-PAGTIYGVEVSYEPFSKLLDLAKKRNNLYPILEDANSPEKYSFFIEHVDVMYQ 148

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           D++Q +Q +I   N + F    G  V+ I++  + ST+ + ++  + +++L     K  E
Sbjct: 149 DISQRNQIQIFKNNVNTFNPKRGFLVLKIRS--VKSTEDSRSILNTAMDQLSVYHLK--E 204

Query: 257 QVTLEPFERDH 225
            + L+P++ DH
Sbjct: 205 VINLKPYDTDH 215

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>FLPA_THEAC (Q9HJL8) Fibrillarin-like pre-rRNA-processing protein|
          Length = 230

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 47/135 (34%), Positives = 76/135 (56%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           HVSDI  P+G +YAVE ++     L+++A++R N+ PI+EDA  P +YR  V  VDVI+ 
Sbjct: 93  HVSDIA-PSGRIYAVEVAYEPFSKLLDLAEQRDNIYPILEDANLPERYRFFVDHVDVIYQ 151

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           D++Q +Q  I   N   F       V  +K   I ST+ A+ +    +E+L +  +   E
Sbjct: 152 DISQRNQIAIFKRNMDEFQPRSAFLV--LKTRSIASTEDAKTILRKTIEQLSS--YNIRE 207

Query: 257 QVTLEPFERDHACVV 213
            + L P++ DH  ++
Sbjct: 208 VIDLSPYDTDHYLIL 222

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>FLPA_HALSA (Q9HQG3) Fibrillarin-like pre-rRNA-processing protein|
          Length = 210

 Score = 79.3 bits (194), Expect = 8e-15
 Identities = 53/136 (38%), Positives = 73/136 (53%), Gaps = 1/136 (0%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLV-GMVDVIF 441
           HV+D  GPT   YAVEF+ R   DL+ +A  R  + P+++DAR P  Y  +V   VD I 
Sbjct: 76  HVADFAGPT---YAVEFAPRPVTDLLAVADSRERLFPLLKDARAPETYAHVVESGVDAIV 132

Query: 440 SDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPS 261
            DVA   QA + AL+   FL + G  V ++KA   D T    AVF   + +L+ D ++  
Sbjct: 133 QDVATRGQADV-ALSNRQFLADDGRLVAALKARSEDVTADPAAVFEDLLGRLR-DGYEVR 190

Query: 260 EQVTLEPFERDHACVV 213
               +EPF  DH  VV
Sbjct: 191 ATARMEPFHEDHLAVV 206

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>FLPA_PICTO (Q6KZQ5) Fibrillarin-like pre-rRNA-processing protein|
          Length = 212

 Score = 67.0 bits (162), Expect = 4e-11
 Identities = 40/128 (31%), Positives = 68/128 (53%)
 Frame = -3

Query: 617 HVSDIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 438
           H+SDI   +G +YAVE S+ S   L ++++ R N+ PI+EDA    +Y+  V   D I+ 
Sbjct: 80  HLSDIC-ISGRLYAVELSYDSFVKLYSLSQARNNIFPILEDANLVERYKFFVEKCDFIYQ 138

Query: 437 DVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVFASEVEKLKADQFKPSE 258
           D+AQ +Q +I   NA  F       +I IKA  I S +  + +    +  ++  ++   E
Sbjct: 139 DIAQRNQVQIFNQNADIFKPRSAILIIKIKA--ISSKEPEKKILKETISSIR--KYNIKE 194

Query: 257 QVTLEPFE 234
            + L P++
Sbjct: 195 IIDLRPYD 202

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>RRMJ_COXBU (Q83BY4) Ribosomal RNA large subunit methyltransferase J (EC|
           2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S
           rRNA m2U2552 methyltransferase)
          Length = 212

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 13/99 (13%)
 Frame = -3

Query: 608 DIVGPTGLVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVA 429
           D+VGP G+V A++         V   +   N   I          + L G VD++ SD+A
Sbjct: 65  DLVGPKGVVIAIDLLPMQSMLDVIFIQGDFNEPEIFNQLEAIVAKKTLTGQVDLVISDMA 124

Query: 428 -------QPDQARILAL------NASYFLKNGGHFVISI 351
                    DQ+R L L       A   L  GG F++ +
Sbjct: 125 PNISGIKNVDQSRSLHLVELAWDCAQKLLARGGTFLVKV 163

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>YQBK_BACSU (P45927) Hypothetical protein yqbK|
          Length = 305

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
 Frame = -3

Query: 431 AQPDQARILALNASYFLKNGGHFVISIKANCIDSTQAAEAVF--ASEVEK---LKADQFK 267
           A  D +  +   A Y    G   +ISI  N IDS++     +   SEV+K    KA++ K
Sbjct: 97  ASADISEGVKATALYGGTKGNDIIISITENVIDSSKVDVTTYLDQSEVDKQTVSKAEELK 156

Query: 266 PSEQVT 249
           P++ VT
Sbjct: 157 PNKYVT 162

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>PROB_DESVH (Q72DJ9) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 380

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -3

Query: 605 IVGPTGLVYAVEFSHRSGRDLVNM-AKKRTNVIPIIEDARHP 483
           I GP G V AV  S+   RDLV +   +R  V  I+ DA  P
Sbjct: 325 IAGPDGTVIAVGLSNYGDRDLVRIKGHRRHEVAAILGDAHFP 366

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>CRUM2_MOUSE (Q80YA8) Crumbs homolog 2 (Crumbs-like protein 2) (Fragment)|
          Length = 1248

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 330 HPGC*GRVCERSGEAQGRPVQAIGAGDPG 244
           H GC G++C  SG     P  ++ +G PG
Sbjct: 507 HEGCPGQLCVASGPVATGPTASVASGPPG 535

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>LSPA_YERPE (Q8ZIL9) Lipoprotein signal peptidase (EC 3.4.23.36)|
           (Prolipoprotein signal peptidase) (Signal peptidase II)
           (SPase II)
          Length = 169

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +1

Query: 256 CSDGLNWSALSFSTSLANTASAAWVESIQFALMEMTKWPPFF 381
           CS GL W  L+    + + +S  WV +  FAL E     PFF
Sbjct: 6   CSTGLRWLWLAVVVVILDISSKQWVMA-HFALYESVPLIPFF 46


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,695,087
Number of Sequences: 219361
Number of extensions: 1581361
Number of successful extensions: 4216
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 4081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4206
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result