| Clone Name | rbags6g01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | VCLA_GOSHI (P09799) Vicilin GC72-A precursor (Alpha-globulin A) | 40 | 0.009 | 2 | VCLB_GOSHI (P09801) Vicilin C72 precursor (Alpha-globulin B) | 37 | 0.10 | 3 | MST2_DROHY (Q08696) Axoneme-associated protein mst101(2) | 32 | 1.9 | 4 | VCL_THECC (Q43358) Vicilin precursor | 31 | 5.5 |
|---|
>VCLA_GOSHI (P09799) Vicilin GC72-A precursor (Alpha-globulin A)| Length = 605 Score = 40.0 bits (92), Expect = 0.009 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 1/96 (1%) Frame = -3 Query: 700 EETRXXKXQCVQQCMRYGXNLXXXXXXXVIERPHAEEVEVDDQSNDSCDHKCQ-HHKVPA 524 E+ + C Q C + L E+ ++ + D+ C +CQ + P Sbjct: 78 EDPQRRYQDCRQHCQQEERRLRPHCEQSCREQYEKQQQQQPDKQFKECQQRCQWQEQRPE 137 Query: 523 RKKQCVDECHRREHHHPSRAACERKCSHWRDPTRKE 416 RK+QCV EC + P + E K WR+ +E Sbjct: 138 RKQQCVKECREQYQEDPWKGERENK---WREEEEEE 170 Score = 30.8 bits (68), Expect = 5.5 Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 7/61 (11%) Frame = -3 Query: 559 CDHKCQHHKVPAR---KKQCVDECHRREHHHPSRA--ACERKCSHWRD--PTRKERCVQT 401 C CQ + R ++ C ++ +++ P + C+++C W++ P RK++CV+ Sbjct: 87 CRQHCQQEERRLRPHCEQSCREQYEKQQQQQPDKQFKECQQRCQ-WQEQRPERKQQCVKE 145 Query: 400 C 398 C Sbjct: 146 C 146
>VCLB_GOSHI (P09801) Vicilin C72 precursor (Alpha-globulin B)| Length = 588 Score = 36.6 bits (83), Expect = 0.10 Identities = 21/84 (25%), Positives = 35/84 (41%) Frame = -3 Query: 700 EETRXXKXQCVQQCMRYGXNLXXXXXXXVIERPHAEEVEVDDQSNDSCDHKCQHHKVPAR 521 E+ + +C Q+C + ++R E+ + Q + H Q + P R Sbjct: 81 EDPQRRYEECQQECRQQEERQRPQCQQRCLKRFEQEQQQSQRQFQECQQHCHQQEQRPER 140 Query: 520 KKQCVDECHRREHHHPSRAACERK 449 K+QCV EC R +P R E + Sbjct: 141 KQQCVRECRERYQENPWRREREEE 164
>MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)| Length = 1391 Score = 32.3 bits (72), Expect = 1.9 Identities = 13/56 (23%), Positives = 26/56 (46%) Frame = -3 Query: 559 CDHKCQHHKVPARKKQCVDECHRREHHHPSRAACERKCSHWRDPTRKERCVQTCMR 392 C+ + + K A KK+C +E +RE + C ++ T K++C + + Sbjct: 1112 CEERAKKEKEAAEKKRC-EEAAKREKEAAEKKKCAEAAKKEKEATEKQKCAEAAKK 1166 Score = 32.3 bits (72), Expect = 1.9 Identities = 19/92 (20%), Positives = 36/92 (39%) Frame = -3 Query: 667 QQCMRYGXNLXXXXXXXVIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRR 488 +QC L E +E E ++ C+ + + K A KKQC +E ++ Sbjct: 1062 KQCEERAKKLKEAAEKKQCEERAKKEKEAAEKKQ--CEERAKKLKEAAEKKQC-EERAKK 1118 Query: 487 EHHHPSRAACERKCSHWRDPTRKERCVQTCMR 392 E + CE ++ K++C + + Sbjct: 1119 EKEAAEKKRCEEAAKREKEAAEKKKCAEAAKK 1150 Score = 30.0 bits (66), Expect = 9.5 Identities = 16/69 (23%), Positives = 29/69 (42%) Frame = -3 Query: 598 AEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREHHHPSRAACERKCSHWRDPTRK 419 A + E + C+ ++ K A KK+C E ++E R CE + K Sbjct: 418 AAKKEKEAAERKKCEELAKNIKKAAEKKKC-KEAAKKEKEAAERKKCEELAKKIKKAAEK 476 Query: 418 ERCVQTCMR 392 ++C +T + Sbjct: 477 KKCEETAKK 485
>VCL_THECC (Q43358) Vicilin precursor| Length = 525 Score = 30.8 bits (68), Expect = 5.5 Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 10/71 (14%) Frame = -3 Query: 595 EEVEVDDQSNDSCDHKC----------QHHKVPARKKQCVDECHRREHHHPSRAACERKC 446 E +++ + C+ +C Q ++ + +QC C ++ + C+RKC Sbjct: 50 ESEATEEREQEQCEQRCEREYKEQQRQQEEELQRQYQQCQGRCQEQQQGQREQQQCQRKC 109 Query: 445 SHWRDPTRKER 413 W +ER Sbjct: 110 --WEQYKEQER 118 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,834,757 Number of Sequences: 219361 Number of extensions: 1606482 Number of successful extensions: 4527 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4516 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 9333329250 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)