ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6g01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VCLA_GOSHI (P09799) Vicilin GC72-A precursor (Alpha-globulin A) 40 0.009
2VCLB_GOSHI (P09801) Vicilin C72 precursor (Alpha-globulin B) 37 0.10
3MST2_DROHY (Q08696) Axoneme-associated protein mst101(2) 32 1.9
4VCL_THECC (Q43358) Vicilin precursor 31 5.5

>VCLA_GOSHI (P09799) Vicilin GC72-A precursor (Alpha-globulin A)|
          Length = 605

 Score = 40.0 bits (92), Expect = 0.009
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
 Frame = -3

Query: 700 EETRXXKXQCVQQCMRYGXNLXXXXXXXVIERPHAEEVEVDDQSNDSCDHKCQ-HHKVPA 524
           E+ +     C Q C +    L         E+   ++ +  D+    C  +CQ   + P 
Sbjct: 78  EDPQRRYQDCRQHCQQEERRLRPHCEQSCREQYEKQQQQQPDKQFKECQQRCQWQEQRPE 137

Query: 523 RKKQCVDECHRREHHHPSRAACERKCSHWRDPTRKE 416
           RK+QCV EC  +    P +   E K   WR+   +E
Sbjct: 138 RKQQCVKECREQYQEDPWKGERENK---WREEEEEE 170



 Score = 30.8 bits (68), Expect = 5.5
 Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
 Frame = -3

Query: 559 CDHKCQHHKVPAR---KKQCVDECHRREHHHPSRA--ACERKCSHWRD--PTRKERCVQT 401
           C   CQ  +   R   ++ C ++  +++   P +    C+++C  W++  P RK++CV+ 
Sbjct: 87  CRQHCQQEERRLRPHCEQSCREQYEKQQQQQPDKQFKECQQRCQ-WQEQRPERKQQCVKE 145

Query: 400 C 398
           C
Sbjct: 146 C 146



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>VCLB_GOSHI (P09801) Vicilin C72 precursor (Alpha-globulin B)|
          Length = 588

 Score = 36.6 bits (83), Expect = 0.10
 Identities = 21/84 (25%), Positives = 35/84 (41%)
 Frame = -3

Query: 700 EETRXXKXQCVQQCMRYGXNLXXXXXXXVIERPHAEEVEVDDQSNDSCDHKCQHHKVPAR 521
           E+ +    +C Q+C +             ++R   E+ +   Q  +   H  Q  + P R
Sbjct: 81  EDPQRRYEECQQECRQQEERQRPQCQQRCLKRFEQEQQQSQRQFQECQQHCHQQEQRPER 140

Query: 520 KKQCVDECHRREHHHPSRAACERK 449
           K+QCV EC  R   +P R   E +
Sbjct: 141 KQQCVRECRERYQENPWRREREEE 164



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>MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)|
          Length = 1391

 Score = 32.3 bits (72), Expect = 1.9
 Identities = 13/56 (23%), Positives = 26/56 (46%)
 Frame = -3

Query: 559  CDHKCQHHKVPARKKQCVDECHRREHHHPSRAACERKCSHWRDPTRKERCVQTCMR 392
            C+ + +  K  A KK+C +E  +RE     +  C       ++ T K++C +   +
Sbjct: 1112 CEERAKKEKEAAEKKRC-EEAAKREKEAAEKKKCAEAAKKEKEATEKQKCAEAAKK 1166



 Score = 32.3 bits (72), Expect = 1.9
 Identities = 19/92 (20%), Positives = 36/92 (39%)
 Frame = -3

Query: 667  QQCMRYGXNLXXXXXXXVIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRR 488
            +QC      L         E    +E E  ++    C+ + +  K  A KKQC +E  ++
Sbjct: 1062 KQCEERAKKLKEAAEKKQCEERAKKEKEAAEKKQ--CEERAKKLKEAAEKKQC-EERAKK 1118

Query: 487  EHHHPSRAACERKCSHWRDPTRKERCVQTCMR 392
            E     +  CE      ++   K++C +   +
Sbjct: 1119 EKEAAEKKRCEEAAKREKEAAEKKKCAEAAKK 1150



 Score = 30.0 bits (66), Expect = 9.5
 Identities = 16/69 (23%), Positives = 29/69 (42%)
 Frame = -3

Query: 598 AEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREHHHPSRAACERKCSHWRDPTRK 419
           A + E +      C+   ++ K  A KK+C  E  ++E     R  CE      +    K
Sbjct: 418 AAKKEKEAAERKKCEELAKNIKKAAEKKKC-KEAAKKEKEAAERKKCEELAKKIKKAAEK 476

Query: 418 ERCVQTCMR 392
           ++C +T  +
Sbjct: 477 KKCEETAKK 485



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>VCL_THECC (Q43358) Vicilin precursor|
          Length = 525

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
 Frame = -3

Query: 595 EEVEVDDQSNDSCDHKC----------QHHKVPARKKQCVDECHRREHHHPSRAACERKC 446
           E    +++  + C+ +C          Q  ++  + +QC   C  ++     +  C+RKC
Sbjct: 50  ESEATEEREQEQCEQRCEREYKEQQRQQEEELQRQYQQCQGRCQEQQQGQREQQQCQRKC 109

Query: 445 SHWRDPTRKER 413
             W     +ER
Sbjct: 110 --WEQYKEQER 118


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,834,757
Number of Sequences: 219361
Number of extensions: 1606482
Number of successful extensions: 4527
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4516
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 9333329250
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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