>gb|AY677177.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS1) mRNA, complete
            cds
          Length = 1433

 Score =  137 bits (69), Expect = 5e-30
 Identities = 77/81 (95%)
 Strand = Plus / Minus

                                                                        
Query: 3    aaacgcagggaagtggccttaggcctnggccttnttgggcactgccaaacgctcncggna 62
            |||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| |
Sbjct: 1143 aaacgcagggaagtggccttaggccttggccttcttgggcactgccaaacgctcccggaa 1084

                                 
Query: 63   gtcgtcctccatgagcaccaa 83
            |||||||||||||||||||||
Sbjct: 1083 gtcgtcctccatgagcaccaa 1063

>emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-glucose dehydratase (tgp gene)
          Length = 1562

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 37   ttgggcactgccaaacgctcncggnagtcgtcctccatgagcaccaa 83
            |||||||| ||||  ||||| ||| |||| |||||||||||||||||
Sbjct: 1275 ttgggcacagccaggcgctcccggaagtcatcctccatgagcaccaa 1229

>gb|AY104952.1| Zea mays PCO092342 mRNA sequence
          Length = 1825

 Score = 46.1 bits (23), Expect = 0.014
 Identities = 52/63 (82%)
 Strand = Plus / Minus

                                                                        
Query: 21   ttaggcctnggccttnttgggcactgccaaacgctcncggnagtcgtcctccatgagcac 80
            |||||||| ||  || |||||||| ||||  ||||| ||| | || ||||||||||||||
Sbjct: 1535 ttaggccttggttttcttgggcacggccaggcgctcccggaaatcatcctccatgagcac 1476

               
Query: 81   caa 83
            |||
Sbjct: 1475 caa 1473

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 38.2 bits (19), Expect = 3.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 63      gtcgtcctccatgagcacc 81
               |||||||||||||||||||
Sbjct: 1195435 gtcgtcctccatgagcacc 1195417


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 250,470
Number of Sequences: 3902068
Number of extensions: 250470
Number of successful extensions: 15103
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15094
Number of HSP's gapped (non-prelim): 9
length of query: 83
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 62
effective length of database: 17,151,101,840
effective search space: 1063368314080
effective search space used: 1063368314080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)