ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags6f12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY736120.1| Triticum aestivum 20S proteasome beta 7 subunit mRNA, complete cds Length = 694 Score = 617 bits (311), Expect = e-173 Identities = 368/387 (95%) Strand = Plus / Minus Query: 137 taccatgttcctacagcacccttggacgggttctcaaaggcggcaaagccccagttggtc 196 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 688 taccatgttcctacagcacccttggatgggttctcaaaggcggcaaacccccagttggtc 629 Query: 197 ttgagggcatacggcgggtagatggtcgatccctcagtcgtgatcttggcaatctggaat 256 || ||||||||||||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 628 ttcagggcatacggcgggtagatggttgatccctcggttgtgatcttggcaatctggaat 569 Query: 257 ttgttgatggatgaccggtcacggtacagcaggaccagcagacatttctcaatcagcttg 316 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 568 ttgttgatggatgaccggtcacggtacagcaggaccagcaagcacttctcaatcagctta 509 Query: 317 acagcttcttcaaaagtcatgtcctcgcgccattcaccgcgaagtattgggattgccata 376 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 508 acagcttcttcaaaagtcatgtcctcgcgccattcaccacgaagtattgggattgccata 449 Query: 377 tgattcccaaatccagtggcaatgtggttctcctcaaagtgtgtaccaatcatgtttacc 436 || |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 448 tggttcccaaatccagtggcaatgtggttttcctcaaagtgtgtaccaatcatgttaacc 389 Query: 437 atgccaagatatttctcatcaccctttgggccctttttcactccaccaagcaccagtgag 496 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 388 atgccaagatacttctcatcgccctttgggccctttttcactccaccaagcaccagggag 329 Query: 497 ttccacagggggtcaaacttattgcgc 523 ||||| || |||||||||||||||||| Sbjct: 328 ttccatagagggtcaaacttattgcgc 302 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 611 aattcatccagatagcgcaaaatctc 636 |||||||||||||| ||||||||||| Sbjct: 298 aattcatccagataccgcaaaatctc 273
>dbj|AK104212.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-D09, full insert sequence Length = 1005 Score = 496 bits (250), Expect = e-137 Identities = 439/502 (87%) Strand = Plus / Minus Query: 135 tctaccatgttcctacagcacccttggacgggttctcaaaggcggcaaagccccagttgg 194 ||||||||| |||||||||||||| || ||| || |||||||| || |||||||||| | Sbjct: 790 tctaccatgatcctacagcaccctgggccggattttcaaaggcagcgaagccccagtaag 731 Query: 195 tcttgagggcatacggcgggtagatggtcgatccctcagtcgtgatcttggcaatctgga 254 |||| | | || |||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 730 tcttcaatgagtatggcgggtagatggtcgctccctcagttgtgatcttggcaatctgga 671 Query: 255 atttgttgatggatgaccggtcacggtacagcaggaccagcagacatttctcaatcagct 314 | ||||| || ||||| |||||||||||||||||||| |||| || ||||||| |||| Sbjct: 670 acttgttaatagatgatcggtcacggtacagcaggacaagcaagcacttctcaacaagct 611 Query: 315 tgacagcttcttcaaaagtcatgtcctcgcgccattcaccgcgaagtattgggattgcca 374 |||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 610 tgacagcttcctcaaatgtcatgtcctcgcgccattcagtacgaagtattgggattgcca 551 Query: 375 tatgattcccaaatccagtggcaatgtggttctcctcaaagtgtgtaccaatcatgttta 434 |||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 550 tatggttcccaaacccagtggcaatgtggttttcctcaaagtgtgtaccaatcatgttaa 491 Query: 435 ccatgccaagatatttctcatcaccctttgggccctttttcactccaccaagcaccagtg 494 ||||||||||||||||||| ||||||||||| ||||||||||| ||||||| || || | Sbjct: 490 ccatgccaagatatttctcttcaccctttggaccctttttcaccccaccaattacaaggg 431 Query: 495 agttccacagggggtcaaacttattgcgccggttgtacatcactcgtgtcaggtaggcgt 554 ||||||| ||||| |||||||| ||||||| |||||||||||||| ||||||||| | Sbjct: 430 agttccagaggggatcaaacttgttgcgcctgttgtacatcactctcgtcaggtagctat 371 Query: 555 ggatttccttggggcccaatgagttcccatcatcccacatatgatcattcagagtcaatt 614 ||| |||||||| ||||| ||||| |||||||||||||||||||| ||| || |||| Sbjct: 370 ggacctccttgggacccaaggagtttccatcatcccacatatgatcggacagggttaatt 311 Query: 615 catccagatagcgcaaaatctc 636 |||||| ||||||||||||||| Sbjct: 310 catccaaatagcgcaaaatctc 289
>dbj|AK103975.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F06, full insert sequence Length = 985 Score = 496 bits (250), Expect = e-137 Identities = 439/502 (87%) Strand = Plus / Minus Query: 135 tctaccatgttcctacagcacccttggacgggttctcaaaggcggcaaagccccagttgg 194 ||||||||| |||||||||||||| || ||| || |||||||| || |||||||||| | Sbjct: 857 tctaccatgatcctacagcaccctgggccggattttcaaaggcagcgaagccccagtaag 798 Query: 195 tcttgagggcatacggcgggtagatggtcgatccctcagtcgtgatcttggcaatctgga 254 |||| | | || |||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 797 tcttcaatgagtatggcgggtagatggtcgctccctcagttgtgatcttggcaatctgga 738 Query: 255 atttgttgatggatgaccggtcacggtacagcaggaccagcagacatttctcaatcagct 314 | ||||| || ||||| |||||||||||||||||||| |||| || ||||||| |||| Sbjct: 737 acttgttaatagatgatcggtcacggtacagcaggacaagcaagcacttctcaacaagct 678 Query: 315 tgacagcttcttcaaaagtcatgtcctcgcgccattcaccgcgaagtattgggattgcca 374 |||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 677 tgacagcttcctcaaatgtcatgtcctcgcgccattcagtacgaagtattgggattgcca 618 Query: 375 tatgattcccaaatccagtggcaatgtggttctcctcaaagtgtgtaccaatcatgttta 434 |||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 617 tatggttcccaaacccagtggcaatgtggttttcctcaaagtgtgtaccaatcatgttaa 558 Query: 435 ccatgccaagatatttctcatcaccctttgggccctttttcactccaccaagcaccagtg 494 ||||||||||||||||||| ||||||||||| ||||||||||| ||||||| || || | Sbjct: 557 ccatgccaagatatttctcttcaccctttggaccctttttcaccccaccaattacaaggg 498 Query: 495 agttccacagggggtcaaacttattgcgccggttgtacatcactcgtgtcaggtaggcgt 554 ||||||| ||||| |||||||| ||||||| |||||||||||||| ||||||||| | Sbjct: 497 agttccagaggggatcaaacttgttgcgcctgttgtacatcactctcgtcaggtagctat 438 Query: 555 ggatttccttggggcccaatgagttcccatcatcccacatatgatcattcagagtcaatt 614 ||| |||||||| ||||| ||||| |||||||||||||||||||| ||| || |||| Sbjct: 437 ggacctccttgggacccaaggagtttccatcatcccacatatgatcggacagggttaatt 378 Query: 615 catccagatagcgcaaaatctc 636 |||||| ||||||||||||||| Sbjct: 377 catccaaatagcgcaaaatctc 356
>dbj|AK071380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091G01, full insert sequence Length = 1090 Score = 496 bits (250), Expect = e-137 Identities = 439/502 (87%) Strand = Plus / Minus Query: 135 tctaccatgttcctacagcacccttggacgggttctcaaaggcggcaaagccccagttgg 194 ||||||||| |||||||||||||| || ||| || |||||||| || |||||||||| | Sbjct: 875 tctaccatgatcctacagcaccctgggccggattttcaaaggcagcgaagccccagtaag 816 Query: 195 tcttgagggcatacggcgggtagatggtcgatccctcagtcgtgatcttggcaatctgga 254 |||| | | || |||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 815 tcttcaatgagtatggcgggtagatggtcgctccctcagttgtgatcttggcaatctgga 756 Query: 255 atttgttgatggatgaccggtcacggtacagcaggaccagcagacatttctcaatcagct 314 | ||||| || ||||| |||||||||||||||||||| |||| || ||||||| |||| Sbjct: 755 acttgttaatagatgatcggtcacggtacagcaggacaagcaagcacttctcaacaagct 696 Query: 315 tgacagcttcttcaaaagtcatgtcctcgcgccattcaccgcgaagtattgggattgcca 374 |||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 695 tgacagcttcctcaaatgtcatgtcctcgcgccattcagtacgaagtattgggattgcca 636 Query: 375 tatgattcccaaatccagtggcaatgtggttctcctcaaagtgtgtaccaatcatgttta 434 |||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 635 tatggttcccaaacccagtggcaatgtggttttcctcaaagtgtgtaccaatcatgttaa 576 Query: 435 ccatgccaagatatttctcatcaccctttgggccctttttcactccaccaagcaccagtg 494 ||||||||||||||||||| ||||||||||| ||||||||||| ||||||| || || | Sbjct: 575 ccatgccaagatatttctcttcaccctttggaccctttttcaccccaccaattacaaggg 516 Query: 495 agttccacagggggtcaaacttattgcgccggttgtacatcactcgtgtcaggtaggcgt 554 ||||||| ||||| |||||||| ||||||| |||||||||||||| ||||||||| | Sbjct: 515 agttccagaggggatcaaacttgttgcgcctgttgtacatcactctcgtcaggtagctat 456 Query: 555 ggatttccttggggcccaatgagttcccatcatcccacatatgatcattcagagtcaatt 614 ||| |||||||| ||||| ||||| |||||||||||||||||||| ||| || |||| Sbjct: 455 ggacctccttgggacccaaggagtttccatcatcccacatatgatcggacagggttaatt 396 Query: 615 catccagatagcgcaaaatctc 636 |||||| ||||||||||||||| Sbjct: 395 catccaaatagcgcaaaatctc 374
>dbj|AB026568.1| Oryza sativa (japonica cultivar-group) OsPBG1 mRNA for beta 7 subunit of 20S proteasome, complete cds Length = 1118 Score = 488 bits (246), Expect = e-134 Identities = 438/502 (87%) Strand = Plus / Minus Query: 135 tctaccatgttcctacagcacccttggacgggttctcaaaggcggcaaagccccagttgg 194 ||||||||| |||||||||||||| || ||| || |||||||| || |||||||||| | Sbjct: 876 tctaccatgatcctacagcaccctgggccggattttcaaaggcagcgaagccccagtaag 817 Query: 195 tcttgagggcatacggcgggtagatggtcgatccctcagtcgtgatcttggcaatctgga 254 |||| | | || |||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 816 tcttcaatgagtatggcgggtagatggtcgctccctcagttgtgatcttggcaatctgga 757 Query: 255 atttgttgatggatgaccggtcacggtacagcaggaccagcagacatttctcaatcagct 314 | ||||| || ||||| |||||||||||||||||||| |||| || ||||||| |||| Sbjct: 756 acttgttaatagatgatcggtcacggtacagcaggacaagcaagcacttctcaacaagct 697 Query: 315 tgacagcttcttcaaaagtcatgtcctcgcgccattcaccgcgaagtattgggattgcca 374 |||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 696 tgacagcttcctcaaatgtcatgtcctcgcgccattcagtacgaagtattgggattgcca 637 Query: 375 tatgattcccaaatccagtggcaatgtggttctcctcaaagtgtgtaccaatcatgttta 434 |||| |||||||| ||||||||||||||||| |||||||| ||||||||||||||||| | Sbjct: 636 tatggttcccaaacccagtggcaatgtggttttcctcaaaatgtgtaccaatcatgttaa 577 Query: 435 ccatgccaagatatttctcatcaccctttgggccctttttcactccaccaagcaccagtg 494 ||||||||||||||||||| ||||||||||| ||||||||||| ||||||| || || | Sbjct: 576 ccatgccaagatatttctcttcaccctttggaccctttttcaccccaccaattacaaggg 517 Query: 495 agttccacagggggtcaaacttattgcgccggttgtacatcactcgtgtcaggtaggcgt 554 ||||||| ||||| |||||||| ||||||| |||||||||||||| ||||||||| | Sbjct: 516 agttccagaggggatcaaacttgttgcgcctgttgtacatcactctcgtcaggtagctat 457 Query: 555 ggatttccttggggcccaatgagttcccatcatcccacatatgatcattcagagtcaatt 614 ||| |||||||| ||||| ||||| |||||||||||||||||||| ||| || |||| Sbjct: 456 ggacctccttgggacccaaggagtttccatcatcccacatatgatcggacagggttaatt 397 Query: 615 catccagatagcgcaaaatctc 636 |||||| ||||||||||||||| Sbjct: 396 catccaaatagcgcaaaatctc 375
>gb|BT018203.1| Zea mays clone EL01N0560A08.c mRNA sequence Length = 946 Score = 418 bits (211), Expect = e-114 Identities = 394/455 (86%) Strand = Plus / Minus Query: 182 aagccccagttggtcttgagggcatacggcgggtagatggtcgatccctcagtcgtgatc 241 |||||||||| |||||| | || ||| || ||||||||||| ||||| || | |||||| Sbjct: 846 aagccccagtaggtcttcaaggaatatggggggtagatggttgatccttcccttgtgatc 787 Query: 242 ttggcaatctggaatttgttgatggatgaccggtcacggtacagcaggaccagcagacat 301 ||||||||||||||||||||||| ||||| | ||| |||||||||| ||||| || || Sbjct: 786 ttggcaatctggaatttgttgatagatgatctgtctcggtacagcaagaccaccaagcac 727 Query: 302 ttctcaatcagcttgacagcttcttcaaaagtcatgtcctcgcgccattcaccgcgaagt 361 ||||||| |||||| |||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 726 ttctcaaccagcttaacagcttcttcaaaagtcatatcctcgcgccattcagcacggagt 667 Query: 362 attgggattgccatatgattcccaaatccagtggcaatgtggttctcctcaaagtgtgta 421 || ||||||||||||||||| ||||||||||| || | ||||| ||||| ||||| ||| Sbjct: 666 atcgggattgccatatgatttccaaatccagtagcgacatggttttcctcgaagtgggta 607 Query: 422 ccaatcatgtttaccatgccaagatatttctcatcaccctttgggccctttttcactcca 481 ||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 606 ccaatcatgttaaccatcccaagatacttctcatcaccctttggaccctttttcacccca 547 Query: 482 ccaagcaccagtgagttccacagggggtcaaacttattgcgccggttgtacatcactcgt 541 ||||| || ||||||||||| || || |||||||| |||||||||||||||||||||| | Sbjct: 546 ccaagtacaagtgagttccagagaggatcaaacttgttgcgccggttgtacatcactctt 487 Query: 542 gtcaggtaggcgtggatttccttggggcccaatgagttcccatcatcccacatatgatca 601 |||| ||| |||||| || |||||||||| ||||| ||||||||||||||||||||| Sbjct: 486 gtcaaatagctgtggatctctttggggcccagcgagtttccatcatcccacatatgatca 427 Query: 602 ttcagagtcaattcatccagatagcgcaaaatctc 636 |||||| | |||||||| ||||||||||||||| Sbjct: 426 gacagagttagttcatccaaatagcgcaaaatctc 392
>gb|AY104193.1| Zea mays PCO143176 mRNA sequence Length = 1187 Score = 396 bits (200), Expect = e-107 Identities = 386/448 (86%) Strand = Plus / Minus Query: 182 aagccccagttggtcttgagggcatacggcgggtagatggtcgatccctcagtcgtgatc 241 |||||||||| |||||| | || ||| || ||||||||||| ||||| ||||| |||||| Sbjct: 948 aagccccagtaggtcttcaaggaatatggtgggtagatggttgatccttcagttgtgatc 889 Query: 242 ttggcaatctggaatttgttgatggatgaccggtcacggtacagcaggaccagcagacat 301 ||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| || Sbjct: 888 ttggcaatctggaatttgttgatagatgacctgtcacggtacagcaagaccagcaagcac 829 Query: 302 ttctcaatcagcttgacagcttcttcaaaagtcatgtcctcgcgccattcaccgcgaagt 361 ||||||| |||||| |||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 828 ttctcaaccagcttaacagcttcttcaaaagtcatatcctcgcgccattcagcacggagt 769 Query: 362 attgggattgccatatgattcccaaatccagtggcaatgtggttctcctcaaagtgtgta 421 || ||||| |||| |||||| |||||||||| || | ||||| ||||| ||||| ||| Sbjct: 768 atcgggatcgccagatgatttgcaaatccagttgcgacatggttttcctcgaagtgggta 709 Query: 422 ccaatcatgtttaccatgccaagatatttctcatcaccctttgggccctttttcactcca 481 |||||||| || |||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 708 ccaatcatattaaccatgccaagatacttctcatcaccctttggaccctttttcactcca 649 Query: 482 ccaagcaccagtgagttccacagggggtcaaacttattgcgccggttgtacatcactcgt 541 ||||| || ||||||||||| || || |||||||| ||||| | |||||||||||||| | Sbjct: 648 ccaagtacaagtgagttccagagaggatcaaacttgttgcgtctgttgtacatcactctt 589 Query: 542 gtcaggtaggcgtggatttccttggggcccaatgagttcccatcatcccacatatgatca 601 |||| || |||||| || |||||||||| || || ||||||||||||||||||||| Sbjct: 588 gtcaaataactgtggatctctttggggcccagagaatttccatcatcccacatatgatca 529 Query: 602 ttcagagtcaattcatccagatagcgca 629 ||||| | ||||||||||||||||| Sbjct: 528 gaaagagttagttcatccagatagcgca 501
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 220 bits (111), Expect = 4e-54 Identities = 165/183 (90%) Strand = Plus / Plus Query: 250 ctggaatttgttgatggatgaccggtcacggtacagcaggaccagcagacatttctcaat 309 |||||| ||||| || ||||| |||||||||||||||||||| |||| || ||||||| Sbjct: 99589 ctggaacttgttaatagatgatcggtcacggtacagcaggacaagcaagcacttctcaac 99648 Query: 310 cagcttgacagcttcttcaaaagtcatgtcctcgcgccattcaccgcgaagtattgggat 369 |||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 99649 aagcttgacagcttcctcaaatgtcatgtcctcgcgccattcagtacgaagtattgggat 99708 Query: 370 tgccatatgattcccaaatccagtggcaatgtggttctcctcaaagtgtgtaccaatcat 429 ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 99709 tgccatatggttcccaaacccagtggcaatgtggttttcctcaaagtgtgtaccaatcat 99768 Query: 430 gtt 432 ||| Sbjct: 99769 gtt 99771 Score = 167 bits (84), Expect = 6e-38 Identities = 147/168 (87%) Strand = Plus / Plus Query: 433 taccatgccaagatatttctcatcaccctttgggccctttttcactccaccaagcaccag 492 ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| || || Sbjct: 99860 taccatgccaagatatttctcttcaccctttggaccctttttcaccccaccaattacaag 99919 Query: 493 tgagttccacagggggtcaaacttattgcgccggttgtacatcactcgtgtcaggtaggc 552 |||||||| ||||| |||||||| ||||||| |||||||||||||| ||||||||| Sbjct: 99920 ggagttccagaggggatcaaacttgttgcgcctgttgtacatcactctcgtcaggtagct 99979 Query: 553 gtggatttccttggggcccaatgagttcccatcatcccacatatgatc 600 |||| |||||||| ||||| ||||| |||||||||||||||||||| Sbjct: 99980 atggacctccttgggacccaaggagtttccatcatcccacatatgatc 100027 Score = 97.6 bits (49), Expect = 4e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 135 tctaccatgttcctacagcacccttggacgggttctcaaaggcggcaaagccccagttgg 194 ||||||||| |||||||||||||| || ||| || |||||||| || |||||||||| | Sbjct: 99377 tctaccatgatcctacagcaccctgggccggattttcaaaggcagcgaagccccagtaag 99436 Query: 195 tcttgagggcatacggcgggtagatggtcgatccctcagtcgtgatcttggcaatct 251 |||| | | || |||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 99437 tcttcaatgagtatggcgggtagatggtcgctccctcagttgtgatcttggcaatct 99493 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 611 aattcatccagatagcgcaaaatctc 636 |||||||||| ||||||||||||||| Sbjct: 100124 aattcatccaaatagcgcaaaatctc 100149
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 220 bits (111), Expect = 4e-54 Identities = 165/183 (90%) Strand = Plus / Plus Query: 250 ctggaatttgttgatggatgaccggtcacggtacagcaggaccagcagacatttctcaat 309 |||||| ||||| || ||||| |||||||||||||||||||| |||| || ||||||| Sbjct: 19772322 ctggaacttgttaatagatgatcggtcacggtacagcaggacaagcaagcacttctcaac 19772381 Query: 310 cagcttgacagcttcttcaaaagtcatgtcctcgcgccattcaccgcgaagtattgggat 369 |||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 19772382 aagcttgacagcttcctcaaatgtcatgtcctcgcgccattcagtacgaagtattgggat 19772441 Query: 370 tgccatatgattcccaaatccagtggcaatgtggttctcctcaaagtgtgtaccaatcat 429 ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 19772442 tgccatatggttcccaaacccagtggcaatgtggttttcctcaaagtgtgtaccaatcat 19772501 Query: 430 gtt 432 ||| Sbjct: 19772502 gtt 19772504 Score = 167 bits (84), Expect = 6e-38 Identities = 147/168 (87%) Strand = Plus / Plus Query: 433 taccatgccaagatatttctcatcaccctttgggccctttttcactccaccaagcaccag 492 ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| || || Sbjct: 19772593 taccatgccaagatatttctcttcaccctttggaccctttttcaccccaccaattacaag 19772652 Query: 493 tgagttccacagggggtcaaacttattgcgccggttgtacatcactcgtgtcaggtaggc 552 |||||||| ||||| |||||||| ||||||| |||||||||||||| ||||||||| Sbjct: 19772653 ggagttccagaggggatcaaacttgttgcgcctgttgtacatcactctcgtcaggtagct 19772712 Query: 553 gtggatttccttggggcccaatgagttcccatcatcccacatatgatc 600 |||| |||||||| ||||| ||||| |||||||||||||||||||| Sbjct: 19772713 atggacctccttgggacccaaggagtttccatcatcccacatatgatc 19772760 Score = 97.6 bits (49), Expect = 4e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 135 tctaccatgttcctacagcacccttggacgggttctcaaaggcggcaaagccccagttgg 194 ||||||||| |||||||||||||| || ||| || |||||||| || |||||||||| | Sbjct: 19772110 tctaccatgatcctacagcaccctgggccggattttcaaaggcagcgaagccccagtaag 19772169 Query: 195 tcttgagggcatacggcgggtagatggtcgatccctcagtcgtgatcttggcaatct 251 |||| | | || |||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 19772170 tcttcaatgagtatggcgggtagatggtcgctccctcagttgtgatcttggcaatct 19772226 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 611 aattcatccagatagcgcaaaatctc 636 |||||||||| ||||||||||||||| Sbjct: 19772857 aattcatccaaatagcgcaaaatctc 19772882
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 220 bits (111), Expect = 4e-54 Identities = 165/183 (90%) Strand = Plus / Plus Query: 250 ctggaatttgttgatggatgaccggtcacggtacagcaggaccagcagacatttctcaat 309 |||||| ||||| || ||||| |||||||||||||||||||| |||| || ||||||| Sbjct: 118008 ctggaacttgttaatagatgatcggtcacggtacagcaggacaagcaagcacttctcaac 118067 Query: 310 cagcttgacagcttcttcaaaagtcatgtcctcgcgccattcaccgcgaagtattgggat 369 |||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 118068 aagcttgacagcttcctcaaatgtcatgtcctcgcgccattcagtacgaagtattgggat 118127 Query: 370 tgccatatgattcccaaatccagtggcaatgtggttctcctcaaagtgtgtaccaatcat 429 ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 118128 tgccatatggttcccaaacccagtggcaatgtggttttcctcaaagtgtgtaccaatcat 118187 Query: 430 gtt 432 ||| Sbjct: 118188 gtt 118190 Score = 167 bits (84), Expect = 6e-38 Identities = 147/168 (87%) Strand = Plus / Plus Query: 433 taccatgccaagatatttctcatcaccctttgggccctttttcactccaccaagcaccag 492 ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| || || Sbjct: 118279 taccatgccaagatatttctcttcaccctttggaccctttttcaccccaccaattacaag 118338 Query: 493 tgagttccacagggggtcaaacttattgcgccggttgtacatcactcgtgtcaggtaggc 552 |||||||| ||||| |||||||| ||||||| |||||||||||||| ||||||||| Sbjct: 118339 ggagttccagaggggatcaaacttgttgcgcctgttgtacatcactctcgtcaggtagct 118398 Query: 553 gtggatttccttggggcccaatgagttcccatcatcccacatatgatc 600 |||| |||||||| ||||| ||||| |||||||||||||||||||| Sbjct: 118399 atggacctccttgggacccaaggagtttccatcatcccacatatgatc 118446 Score = 97.6 bits (49), Expect = 4e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 135 tctaccatgttcctacagcacccttggacgggttctcaaaggcggcaaagccccagttgg 194 ||||||||| |||||||||||||| || ||| || |||||||| || |||||||||| | Sbjct: 117796 tctaccatgatcctacagcaccctgggccggattttcaaaggcagcgaagccccagtaag 117855 Query: 195 tcttgagggcatacggcgggtagatggtcgatccctcagtcgtgatcttggcaatct 251 |||| | | || |||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 117856 tcttcaatgagtatggcgggtagatggtcgctccctcagttgtgatcttggcaatct 117912 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 611 aattcatccagatagcgcaaaatctc 636 |||||||||| ||||||||||||||| Sbjct: 118543 aattcatccaaatagcgcaaaatctc 118568
>ref|NM_104523.2| Arabidopsis thaliana PBG1; endopeptidase/ peptidase/ threonine endopeptidase AT1G56450 (PBG1) mRNA, complete cds Length = 1032 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 496 gttccacagggggtcaaacttattgcgccggttgtacatcactcgtgtcaggtaggcgtg 555 ||||||||| |||| |||||| ||||| |||||||||||||| || ||||| ||| ||| Sbjct: 470 gttccacagagggttaaacttgttgcgacggttgtacatcacacgggtcagatagttgtg 411 Query: 556 gatttccttggggcccaatgagttcccatcatcccacatatgatcattcag 606 || || || || ||||| ||||| |||||||||||||| | ||||||||| Sbjct: 410 aatctcttttggtcccaaagagttaccatcatcccacatgttatcattcag 360
>dbj|AK221762.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL21-60-O20 Length = 1041 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 496 gttccacagggggtcaaacttattgcgccggttgtacatcactcgtgtcaggtaggcgtg 555 ||||||||| |||| |||||| ||||| |||||||||||||| || ||||| ||| ||| Sbjct: 480 gttccacagagggttaaacttgttgcgacggttgtacatcacacgggtcagatagttgtg 421 Query: 556 gatttccttggggcccaatgagttcccatcatcccacatatgatcattcag 606 || || || || ||||| ||||| |||||||||||||| | ||||||||| Sbjct: 420 aatctcttttggtcccaaagagttaccatcatcccacatgttatcattcag 370
>gb|AY052739.1| Arabidopsis thaliana At1g56450/F13N6_3 mRNA, complete cds Length = 741 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 496 gttccacagggggtcaaacttattgcgccggttgtacatcactcgtgtcaggtaggcgtg 555 ||||||||| |||| |||||| ||||| |||||||||||||| || ||||| ||| ||| Sbjct: 393 gttccacagagggttaaacttgttgcgacggttgtacatcacacgggtcagatagttgtg 334 Query: 556 gatttccttggggcccaatgagttcccatcatcccacatatgatcattcag 606 || || || || ||||| ||||| |||||||||||||| | ||||||||| Sbjct: 333 aatctcttttggtcccaaagagttaccatcatcccacatgttatcattcag 283
>gb|AY045596.1| Arabidopsis thaliana At1g56450/F13N6_3 mRNA, complete cds Length = 974 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 496 gttccacagggggtcaaacttattgcgccggttgtacatcactcgtgtcaggtaggcgtg 555 ||||||||| |||| |||||| ||||| |||||||||||||| || ||||| ||| ||| Sbjct: 446 gttccacagagggttaaacttgttgcgacggttgtacatcacacgggtcagatagttgtg 387 Query: 556 gatttccttggggcccaatgagttcccatcatcccacatatgatcattcag 606 || || || || ||||| ||||| |||||||||||||| | ||||||||| Sbjct: 386 aatctcttttggtcccaaagagttaccatcatcccacatgttatcattcag 336
>gb|AF378880.1|AF378880 Arabidopsis thaliana At1g56450/F13N6_3 mRNA, complete cds Length = 1018 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 496 gttccacagggggtcaaacttattgcgccggttgtacatcactcgtgtcaggtaggcgtg 555 ||||||||| |||| |||||| ||||| |||||||||||||| || ||||| ||| ||| Sbjct: 469 gttccacagagggttaaacttgttgcgacggttgtacatcacacgggtcagatagttgtg 410 Query: 556 gatttccttggggcccaatgagttcccatcatcccacatatgatcattcag 606 || || || || ||||| ||||| |||||||||||||| | ||||||||| Sbjct: 409 aatctcttttggtcccaaagagttaccatcatcccacatgttatcattcag 359
>gb|AC058785.8|AC058785 Arabidopsis thaliana chromosome 1 BAC F13N6 genomic sequence, complete sequence Length = 90698 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 496 gttccacagggggtcaaacttattgcgccggttgtacatcactcgtgtcaggtaggcgtg 555 ||||||||| |||| |||||| ||||| |||||||||||||| || ||||| ||| ||| Sbjct: 53652 gttccacagagggttaaacttgttgcgacggttgtacatcacacgggtcagatagttgtg 53593 Query: 556 gatttccttggggcccaatgagttcccatcatcccacatatgatcattcag 606 || || || || ||||| ||||| |||||||||||||| | ||||||||| Sbjct: 53592 aatctcttttggtcccaaagagttaccatcatcccacatgttatcattcag 53542
>gb|AF043538.1|AF043538 Arabidopsis thaliana 20S proteasome beta subunit PBG1 (PBG1) mRNA, complete cds Length = 1032 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 496 gttccacagggggtcaaacttattgcgccggttgtacatcactcgtgtcaggtaggcgtg 555 ||||||||| |||| |||||| ||||| |||||||||||||| || ||||| ||| ||| Sbjct: 435 gttccacagagggttaaacttgttgcgacggttgtacatcacacgggtcagatagttgtg 376 Query: 556 gatttccttggggcccaatgagttcccatcatcccacatatgatcattcag 606 || || || || ||||| ||||| |||||||||||||| | ||||||||| Sbjct: 375 aatctcttttggtcccaaagagttaccatcatcccacatgttatcattcag 325
>emb|BX817388.1|CNS0AAIN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL1ZB01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 545 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 496 gttccacagggggtcaaacttattgcgccggttgtacatcac 537 ||||||||| |||| |||||| ||||| |||||||||||||| Sbjct: 44 gttccacagagggttaaacttgttgcgacggttgtacatcac 3
>emb|AJ291743.1|NTA291743 Nicotiana tabacum partial mRNA for putative beta7 proteasome subunit (b7 gene) Length = 389 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Minus Query: 470 tttttcactccaccaagcaccagtgagttccacagggggtcaaacttattgcgccggttg 529 ||||||||||||||||| || || || ||||| || |||| ||||| ||||| || || Sbjct: 273 tttttcactccaccaagtacaagcgaattccaaagtgggttgaacttgttgcgacgatta 214 Query: 530 tacatcactcgtgtcaggtaggcgtggatttccttggggcccaatgagttcccatcatcc 589 ||||||| ||||| | ||| || | ||| ||||| ||||| ||||||||||||||| Sbjct: 213 tacatcatacgtgttaaatagttatgcacttctttgggacccaaggagttcccatcatcc 154 Query: 590 cacat 594 ||||| Sbjct: 153 cacat 149
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 42 agtcatgttcagatcaaacgctcaca 67 ||||||| |||||||||||||||||| Sbjct: 20274307 agtcatggtcagatcaaacgctcaca 20274282
>dbj|AP005615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0006J22 Length = 145271 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 42 agtcatgttcagatcaaacgctcaca 67 ||||||| |||||||||||||||||| Sbjct: 25112 agtcatggtcagatcaaacgctcaca 25087
>dbj|AP001825.4| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2537O9, complete sequences Length = 206624 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 aatatgcttcatttcctatctc 118 |||||||||||||||||||||| Sbjct: 55484 aatatgcttcatttcctatctc 55463
>ref|XM_875888.1| PREDICTED: Bos taurus similar to vesicle amine transport protein 1, transcript variant 3 (LOC510698), mRNA Length = 2365 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 318 cagcttcttcaaaagtcatgtcctc 342 |||||||||||||||||||| |||| Sbjct: 259 cagcttcttcaaaagtcatggcctc 235
>ref|XM_587873.2| PREDICTED: Bos taurus similar to vesicle amine transport protein 1, transcript variant 1 (LOC510698), mRNA Length = 2654 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 318 cagcttcttcaaaagtcatgtcctc 342 |||||||||||||||||||| |||| Sbjct: 548 cagcttcttcaaaagtcatggcctc 524
>gb|AC132288.5| Mus musculus BAC clone RP24-315D13 from chromosome 19, complete sequence Length = 177655 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 293 agcagacatttctcaatcagc 313 ||||||||||||||||||||| Sbjct: 83827 agcagacatttctcaatcagc 83847
>gb|AC108487.2| Homo sapiens chromosome 3 clone RP11-733E24, complete sequence Length = 180925 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 470 tttttcactccaccaagcacc 490 ||||||||||||||||||||| Sbjct: 172203 tttttcactccaccaagcacc 172223
>gb|AC090657.40| Mus musculus strain C57BL/6J clone rp23-410i12 map 18, complete sequence Length = 186929 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 293 agcagacatttctcaatcagc 313 ||||||||||||||||||||| Sbjct: 58217 agcagacatttctcaatcagc 58237
>gb|AC025812.11|AC025812 Homo sapiens chromosome 3 clone RP11-182G24, complete sequence Length = 149006 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 470 tttttcactccaccaagcacc 490 ||||||||||||||||||||| Sbjct: 111648 tttttcactccaccaagcacc 111668
>ref|XM_221722.3| PREDICTED: Rattus norvegicus ubiquitin specific protease 25 (predicted) (Usp25_predicted), mRNA Length = 4533 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 290 accagcagacatttctcaatcagct 314 |||||||||||||||| |||||||| Sbjct: 578 accagcagacatttctgaatcagct 602
>gb|AF152365.1|AF152365 Homo sapiens constitutive fragile region FRA3B sequence Length = 246546 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 470 tttttcactccaccaagcacc 490 ||||||||||||||||||||| Sbjct: 145735 tttttcactccaccaagcacc 145755
>gb|AC005548.1|AC005548 Homo sapiens chromosome 17, clone hRPK.756_K_11, complete sequence Length = 156811 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tggcaatgtggttctcctcaa 413 ||||||||||||||||||||| Sbjct: 7428 tggcaatgtggttctcctcaa 7448
>gb|AC117657.11| Mus musculus chromosome 15, clone RP23-299O23, complete sequence Length = 198005 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 cacacaagggctgaaactgt 83 |||||||||||||||||||| Sbjct: 194267 cacacaagggctgaaactgt 194248
>emb|CR848817.8| Zebrafish DNA sequence from clone DKEY-211I2 in linkage group 16, complete sequence Length = 54602 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 cttattgcgccggttgtaca 533 |||||||||||||||||||| Sbjct: 12660 cttattgcgccggttgtaca 12679
>gb|AC118022.12| Mus musculus chromosome 15, clone RP23-459I23, complete sequence Length = 190653 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 cacacaagggctgaaactgt 83 |||||||||||||||||||| Sbjct: 11877 cacacaagggctgaaactgt 11858
>gb|AC105305.8| Mus musculus strain C57BL/6J clone rp23-80n4 map 17, complete sequence Length = 214567 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 acatgccatacagcagcaaatgta 34 |||||| ||||||||||||||||| Sbjct: 204308 acatgcaatacagcagcaaatgta 204285
>gb|AC105302.27| Mus musculus strain C57BL/6J clone rp23-45h18 map 17, complete sequence Length = 238088 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 acatgccatacagcagcaaatgta 34 |||||| ||||||||||||||||| Sbjct: 168595 acatgcaatacagcagcaaatgta 168618
>gb|AC109609.12| Mus musculus strain C57BL/6J clone rp23-167h1 map 17, complete sequence Length = 167619 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 acatgccatacagcagcaaatgta 34 |||||| ||||||||||||||||| Sbjct: 77476 acatgcaatacagcagcaaatgta 77499
>emb|AL807740.6| Human DNA sequence from clone RP11-203E14 on chromosome X, complete sequence Length = 166548 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 gaaactgttccagcagcaga 95 |||||||||||||||||||| Sbjct: 116939 gaaactgttccagcagcaga 116958
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 gctgaaactgttccagcagc 92 |||||||||||||||||||| Sbjct: 1928616 gctgaaactgttccagcagc 1928597
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tcgcgccattcaccgcgaag 360 |||||||||||||||||||| Sbjct: 863335 tcgcgccattcaccgcgaag 863354
>ref|XM_962918.1| PREDICTED: Tribolium castaneum similar to CG11397-PA (LOC656381), mRNA Length = 3834 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 298 acatttctcaatcagcttgacagcttcttcaa 329 |||||||||||||| ||| |||||||| |||| Sbjct: 2661 acatttctcaatcatcttcacagcttcgtcaa 2630
>ref|XM_778811.1| PREDICTED: Strongylocentrotus purpuratus similar to Zinc phosphodiesterase ELAC protein 2 (Ribonuclease Z 2) (RNase Z 2) (tRNase Z 2) (tRNA 3 endonuclease 2) (ElaC homolog protein 2) (LOC578654), mRNA Length = 2052 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 cagcagacatttctcaatcagctt 315 ||||||||||| |||||||||||| Sbjct: 847 cagcagacattactcaatcagctt 870
>gb|AC027309.3| Homo sapiens chromosome 5 clone CTB-79E8, complete sequence Length = 189479 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 tgccatacagcagcaaatgt 33 |||||||||||||||||||| Sbjct: 151667 tgccatacagcagcaaatgt 151648
>gb|AC090684.6| Homo sapiens chromosome 18, clone RP11-409K17, complete sequence Length = 77101 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 agaatatgcttcatttccta 114 |||||||||||||||||||| Sbjct: 70818 agaatatgcttcatttccta 70837
>gb|AC011711.8| Homo sapiens chromosome 11, clone RP11-309J20, complete sequence Length = 149542 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tcttcaaaagtcatgtcctc 342 |||||||||||||||||||| Sbjct: 24369 tcttcaaaagtcatgtcctc 24350
>gb|AC018375.8| Homo sapiens, clone RP11-3P24, complete sequence Length = 149951 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tcttcaaaagtcatgtcctc 342 |||||||||||||||||||| Sbjct: 143111 tcttcaaaagtcatgtcctc 143092
>gb|AC018994.7|AC018994 Homo sapiens chromosome 18, clone RP11-619L19, complete sequence Length = 166451 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 agaatatgcttcatttccta 114 |||||||||||||||||||| Sbjct: 26534 agaatatgcttcatttccta 26553
>gb|AC022217.5|AC022217 Homo sapiens BAC clone RP11-779O18 from 5, complete sequence Length = 193960 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 tgccatacagcagcaaatgt 33 |||||||||||||||||||| Sbjct: 26096 tgccatacagcagcaaatgt 26077
>gb|AC124861.3| Homo sapiens BAC clone RP11-622A18 from 2, complete sequence Length = 153731 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 aatcagcttgacagcttcttcaaa 330 |||||||||| ||||||||||||| Sbjct: 119669 aatcagcttgtcagcttcttcaaa 119646
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome Length = 1358633 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ctgaaactgttccagcagca 93 |||||||||||||||||||| Sbjct: 1221295 ctgaaactgttccagcagca 1221314
>emb|AL929076.10| Mouse DNA sequence from clone RP23-64F21 on chromosome 2, complete sequence Length = 126565 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 tttgggccctttttcactccacca 484 |||||||||||| ||||||||||| Sbjct: 120460 tttgggccctttctcactccacca 120437
>dbj|AB028618.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MOD1 Length = 85690 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 302 ttctcaatcagcttgacagcttcttcaa 329 |||||||||||||| ||||||| ||||| Sbjct: 11654 ttctcaatcagcttcacagctttttcaa 11627
>emb|CR293509.11| Zebrafish DNA sequence from clone DKEY-224K5 in linkage group 4, complete sequence Length = 143625 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 aatttgttgatggatgaccg 273 |||||||||||||||||||| Sbjct: 115720 aatttgttgatggatgaccg 115739
>gb|CP000021.1| Vibrio fischeri ES114 chromosome II, complete sequence Length = 1332022 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 caatcatgtttaccatgcca 442 |||||||||||||||||||| Sbjct: 879932 caatcatgtttaccatgcca 879951
>gb|AC093319.18| Mus musculus strain C57BL/6J chromosome 17 clone rp23-258p19, complete sequence Length = 166527 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 acatgccatacagcagcaaatgta 34 |||||| ||||||||||||||||| Sbjct: 94145 acatgcaatacagcagcaaatgta 94122 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,078,902 Number of Sequences: 3902068 Number of extensions: 5078902 Number of successful extensions: 88906 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88696 Number of HSP's gapped (non-prelim): 202 length of query: 636 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 613 effective length of database: 17,143,297,704 effective search space: 10508841492552 effective search space used: 10508841492552 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
