ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags6f11 |
|---|---|
| Clone Library Name | barley_pub |
>SOF1_YEAST (P33750) Protein SOF1| Length = 489 Score = 116 bits (290), Expect = 6e-26 Identities = 55/103 (53%), Positives = 75/103 (72%) Frame = -3 Query: 623 TVRIFNYIGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVVL 444 ++RI+ HSREIYHTKRMQ VF VKY+ D Y++SGSDD N+RLW+S A E+ V Sbjct: 328 SIRIYKTNHGHSREIYHTKRMQHVFQVKYSMDSKYIISGSDDGNVRLWRSKAWERSNVKT 387 Query: 443 PRERKKQEYLDAVKLRYGHLPEIRRIVKHKHVPKPIYKAGKIR 315 RE+ K EY + +K R+ H+PEI+RI +H+HVP+ I KA +I+ Sbjct: 388 TREKNKLEYDEKLKERFRHMPEIKRISRHRHVPQVIKKAQEIK 430
>STRAP_HUMAN (Q9Y3F4) Serine-threonine kinase receptor-associated protein| (UNR-interacting protein) (WD-40 repeat protein PT-WD) (MAP activator with WD repeats) Length = 350 Score = 36.2 bits (82), Expect = 0.081 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 3/43 (6%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGV---VLPRE 435 + CV+++ DG SGS+D LRLW++ + G+ VLP E Sbjct: 268 IHCVRFSPDGELYASGSEDGTLRLWQTVVGKTYGLWKCVLPEE 310
>STRAP_MOUSE (Q9Z1Z2) Serine-threonine kinase receptor-associated protein| (UNR-interacting protein) Length = 351 Score = 36.2 bits (82), Expect = 0.081 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 3/43 (6%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGV---VLPRE 435 + CV+++ DG SGS+D LRLW++ + G+ VLP E Sbjct: 268 IHCVRFSPDGELYASGSEDGTLRLWQTVVGKTYGLWKCVLPEE 310
>HIR1_YEAST (P32479) Histone transcription regulator 1| Length = 788 Score = 35.8 bits (81), Expect = 0.11 Identities = 15/46 (32%), Positives = 25/46 (54%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVVLPRERKKQEY 417 + CVK++ DG YL SGSDD L +W + + E +++ + Sbjct: 30 ITCVKFSPDGKYLASGSDDRILLIWALDEEQSSQPAFGSEHEREHW 75
>POF1_SCHPO (P87053) F-box/WD-repeat protein pof1 (Skp1-binding protein 1)| Length = 605 Score = 35.8 bits (81), Expect = 0.11 Identities = 20/56 (35%), Positives = 30/56 (53%) Frame = -3 Query: 623 TVRIFNYIGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQL 456 T+RI+NY I H V C+ T+D T LVSGS D ++LW + +++ Sbjct: 334 TIRIWNYRTSECISILHG-HTDSVLCL--TFDSTLLVSGSADCTVKLWHFSGGKRI 386
>YM3M_CAEEL (P91343) Hypothetical WD-repeat protein F55F8.5| Length = 439 Score = 35.4 bits (80), Expect = 0.14 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQ 459 V CV D T +SGS DTNL++W +AS++ Sbjct: 214 VECVSVNSDSTRAISGSVDTNLKIWNLDASDE 245
>APAF_BRARE (Q9I9H8) Apoptotic protease-activating factor 1 (Apaf-1)| Length = 1261 Score = 35.4 bits (80), Expect = 0.14 Identities = 16/51 (31%), Positives = 32/51 (62%) Frame = -3 Query: 623 TVRIFNYIGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSN 471 TV ++N+ ++ + + V CV+++ DG+ L+S SDD +RLW+++ Sbjct: 865 TVELWNFESS-KKKAECSGHLSWVHCVQFSPDGSLLLSSSDDQTIRLWETD 914
>YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466| Length = 1526 Score = 34.3 bits (77), Expect = 0.31 Identities = 16/33 (48%), Positives = 21/33 (63%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQL 456 V V ++ DGT L SGSDD +RLW ++ E L Sbjct: 1329 VSSVTFSPDGTMLASGSDDQTVRLWSISSGECL 1361 Score = 33.1 bits (74), Expect = 0.68 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = -3 Query: 545 VKYTYDGTYLVSGSDDTNLRLWKSNASEQL 456 + ++ DGT L SGSDD +RLW ++ E L Sbjct: 1416 IVFSPDGTLLASGSDDQTVRLWNISSGECL 1445 Score = 32.0 bits (71), Expect = 1.5 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -3 Query: 623 TVRIFNYIGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASE 462 TVR++N H + V V ++ DG L SGSDD ++LW E Sbjct: 1433 TVRLWNISSGECLYTLHG-HINSVRSVAFSSDGLILASGSDDETIKLWDVKTGE 1485 Score = 31.2 bits (69), Expect = 2.6 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = -3 Query: 545 VKYTYDGTYLVSGSDDTNLRLWKSNASEQL 456 V + DG+ L SGS D +RLW+ N+S+ L Sbjct: 1206 VVFNPDGSTLASGSSDQTVRLWEINSSKCL 1235 Score = 30.8 bits (68), Expect = 3.4 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASE 462 V+ V + DG+ L +GS D +RLW ++S+ Sbjct: 993 VYSVAFNLDGSMLATGSGDQTVRLWDISSSQ 1023 Score = 30.4 bits (67), Expect = 4.4 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 Query: 545 VKYTYDGTYLVSGSDDTNLRLWKSNASEQL 456 V ++ DG L SGSDD +RLW ++ + L Sbjct: 912 VGFSQDGKMLASGSDDQTVRLWDISSGQCL 941 Score = 30.0 bits (66), Expect = 5.8 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Frame = -3 Query: 623 TVRIFNYIGDHSREIY--HTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLW 480 TVR+++ I+ HT ++ V ++ DG L SGSDD +RLW Sbjct: 1013 TVRLWDISSSQCFYIFQGHTSCVRSVV---FSSDGAMLASGSDDQTVRLW 1059 Score = 29.6 bits (65), Expect = 7.6 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -3 Query: 545 VKYTYDGTYLVSGSDDTNLRLWKSNASEQL 456 V + DG+ L SGS D +RLW+ ++S+ L Sbjct: 1290 VAFNPDGSMLASGSGDQTVRLWEISSSKCL 1319 Score = 29.3 bits (64), Expect = 9.9 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVV 447 V V ++ DG L SGS D +RLW ++S+ L ++ Sbjct: 1161 VNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYIL 1196
>WD51A_MOUSE (Q8JZX3) WD-repeat protein 51A| Length = 405 Score = 34.3 bits (77), Expect = 0.31 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = -3 Query: 572 TKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASE 462 T+ + V C K++ DG +VS SDD ++LW + E Sbjct: 142 TQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 178 Score = 30.4 bits (67), Expect = 4.4 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = -3 Query: 590 SREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSN 471 SR T V CV ++ G L SGS D +R+W N Sbjct: 52 SRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPN 91
>STRN4_HUMAN (Q9NRL3) Striatin-4 (Zinedin)| Length = 753 Score = 33.9 bits (76), Expect = 0.40 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = -3 Query: 563 MQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVVLPRERKKQEYLDAV 405 + V C+ +G +L+SGS D +LRLW + + + +K +E + AV Sbjct: 679 LDAVTCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAV 731
>PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkwA (EC| 2.7.11.1) Length = 742 Score = 33.9 bits (76), Expect = 0.40 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGV 450 V V ++ DG L SGSDD +RLW A+E+ V Sbjct: 504 VRAVAFSPDGALLASGSDDATVRLWDVAAAEERAV 538 Score = 32.7 bits (73), Expect = 0.89 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQ 459 V V ++ DG L SGSDD +RLW A E+ Sbjct: 671 VRAVAFSPDGALLASGSDDRTIRLWDVAAQEE 702
>STRN4_MOUSE (P58404) Striatin-4 (Zinedin)| Length = 760 Score = 33.9 bits (76), Expect = 0.40 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = -3 Query: 563 MQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVVLPRERKKQEYLDAV 405 + V C+ +G +L+SGS D +LRLW + + + +K +E + AV Sbjct: 686 LDAVTCLAVDPNGVFLMSGSHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAV 738
>ELP2_YEAST (P42935) Elongator complex protein 2 (Gamma-toxin target 2)| Length = 788 Score = 33.5 bits (75), Expect = 0.52 Identities = 14/51 (27%), Positives = 32/51 (62%), Gaps = 2/51 (3%) Frame = -3 Query: 623 TVRIFNYIGDHSREIYHTKRMQR--VFCVKYTYDGTYLVSGSDDTNLRLWK 477 T+ +++ I +++ +Y T + V CV++ D ++VS S+D ++++WK Sbjct: 37 TIALWDPIEPNNKGVYATLKGHEAEVTCVRFVPDSDFMVSASEDHHVKIWK 87
>YCW2_YEAST (P25382) Hypothetical WD-repeat protein YCR072C| Length = 515 Score = 33.1 bits (74), Expect = 0.68 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVVL 444 V CV ++ DG + +GS D +RLW + + LG L Sbjct: 189 VLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDAL 225
>CAF1B_MOUSE (Q9D0N7) Chromatin assembly factor 1 subunit B (CAF-1 subunit B)| (Chromatin assembly factor I p60 subunit) (CAF-I 60 kDa subunit) (CAF-Ip60) Length = 572 Score = 33.1 bits (74), Expect = 0.68 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%) Frame = -3 Query: 575 HTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVVLPRERKK----QEYLDA 408 HTK + V+++ G L SG DD + LWK N S++ + ++ ++ +E Sbjct: 65 HTKAVN---VVRFSPTGEILASGGDDAVILLWKMNDSKEPEQIAFQDEEEAQLNKENWTV 121 Query: 407 VKLRYGHLPEI 375 VK GHL ++ Sbjct: 122 VKTLRGHLEDV 132
>TUP12_SCHPO (Q9UUG8) Transcriptional repressor tup12| Length = 586 Score = 33.1 bits (74), Expect = 0.68 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = -3 Query: 617 RIFNYIGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQ 459 R++ + H +EIY + ++ DG LVSGS D + LW A EQ Sbjct: 367 RVYRLLTGHEQEIYS---------LDFSKDGKTLVSGSGDRTVCLWDVEAGEQ 410 Score = 32.7 bits (73), Expect = 0.89 Identities = 13/28 (46%), Positives = 20/28 (71%) Frame = -3 Query: 560 QRVFCVKYTYDGTYLVSGSDDTNLRLWK 477 + V+ V ++ DG YLVSGS D ++LW+ Sbjct: 459 ESVYSVAFSPDGKYLVSGSLDNTIKLWE 486
>WD51A_HUMAN (Q8NBT0) WD-repeat protein 51A| Length = 407 Score = 33.1 bits (74), Expect = 0.68 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASE 462 V C K++ DG +VS SDD ++LW ++ E Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKSSRE 178 Score = 30.4 bits (67), Expect = 4.4 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = -3 Query: 590 SREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSN 471 SR T V CV ++ G L SGS D +R+W N Sbjct: 52 SRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPN 91
>WDR3_HUMAN (Q9UNX4) WD-repeat protein 3| Length = 943 Score = 33.1 bits (74), Expect = 0.68 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Frame = -3 Query: 560 QRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVVLPRER---KKQEYLDAV 405 Q ++C+ + G Y+VS S D +LRLW+ ++L ER ++ EY ++V Sbjct: 676 QEIWCLAVSPSGDYVVSSSHDKSLRLWERTREP---LILEEEREMEREAEYEESV 727 Score = 29.3 bits (64), Expect = 9.9 Identities = 9/25 (36%), Positives = 17/25 (68%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLW 480 V C+ ++DG + +GS D N+++W Sbjct: 594 VICMDISHDGALIATGSADRNVKIW 618
>Y2800_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800| Length = 1258 Score = 32.7 bits (73), Expect = 0.89 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Frame = -3 Query: 623 TVRIFNYIGDHSREIY--HTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLW 480 T++I+NY + Y HT V+ + Y+ D LVSGS D ++LW Sbjct: 833 TIKIWNYHTGECLKTYIGHTNS---VYSIAYSPDSKILVSGSGDRTIKLW 879
>WD51A_BOVIN (Q2TBP4) WD-repeat protein 51A| Length = 407 Score = 32.7 bits (73), Expect = 0.89 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASE 462 V C K++ DG +VS SDD ++LW + E Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 178
>WDR18_HUMAN (Q9BV38) WD-repeat protein 18| Length = 432 Score = 32.7 bits (73), Expect = 0.89 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%) Frame = -3 Query: 620 VRIFNYIGDHSREIYHTKRMQRVF--------CVKYTYDGTYLVSGSDDTNLRLWKSNAS 465 V +F + G R + + +VF C+ + DG+ L+SGS D +RLW + Sbjct: 242 VDLFTWPGQRERSFHPEQDAGKVFKGHRNQVTCLSVSTDGSVLLSGSHDETVRLWDVQSK 301 Query: 464 EQLGVV 447 + + V Sbjct: 302 QCIRTV 307
>NBEAL_HUMAN (Q6ZS30) Neurobeachin-like 1 (Amyotrophic lateral sclerosis 2| chromosomal region candidate gene 17 protein) Length = 1314 Score = 32.7 bits (73), Expect = 0.89 Identities = 21/65 (32%), Positives = 32/65 (49%) Frame = -3 Query: 569 KRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVVLPRERKKQEYLDAVKLRYG 390 + M V C+ Y G +L+SGS DT +W+ ++Q GV + K + L YG Sbjct: 1080 RHMDIVTCLATDYCGIHLISGSRDTTCMIWQ--ITQQGGVPVGLASKPFQIL------YG 1131 Query: 389 HLPEI 375 H E+ Sbjct: 1132 HTNEV 1136
>YP183_YEAST (Q08924) WD-repeat protein YPL183C| Length = 1013 Score = 32.7 bits (73), Expect = 0.89 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGV 450 +F V + +G Y+ S SDD ++RLW +QL V Sbjct: 182 IFYVNLSNNGRYVASCSDDRSIRLWDLETGKQLSV 216
>ZN313_BOVIN (Q4U5R4) Zinc finger protein 313| Length = 230 Score = 32.3 bits (72), Expect = 1.2 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +1 Query: 121 CHLSHSIKN*TPXIPLCLASPWSDPPY 201 C LSHS + P+C + PW DP Y Sbjct: 162 CKLSHSTDTKSVVCPICASMPWGDPNY 188
>Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163| Length = 1693 Score = 32.3 bits (72), Expect = 1.2 Identities = 13/49 (26%), Positives = 27/49 (55%) Frame = -3 Query: 623 TVRIFNYIGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWK 477 T R++N G + H ++ +F +++ DG ++V+ SDD +W+ Sbjct: 1447 TARVWNNTGRELAVLRHYEK--NIFAAEFSADGQFIVTASDDNTAGIWE 1493
>GBB3_TOBAC (Q40507) Guanine nucleotide-binding protein beta subunit| Length = 375 Score = 32.3 bits (72), Expect = 1.2 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = -3 Query: 557 RVFCVKYTYDGTYLVSGSDDTNLRLWKSNASE 462 R+ C+ + DG+ L +GS DTNL++W +E Sbjct: 343 RISCLGLSADGSALCTGSWDTNLKIWAFGGTE 374
>KTNB1_HUMAN (Q9BVA0) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 655 Score = 32.3 bits (72), Expect = 1.2 Identities = 12/35 (34%), Positives = 22/35 (62%) Frame = -3 Query: 560 QRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQL 456 Q V C++++ DG +L S +DD ++LW A + + Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
>TAF5L_MOUSE (Q91WQ5) TAF5-like RNA polymerase II p300/CBP-associated| factor-associated factor 65 kDa subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta) Length = 589 Score = 32.3 bits (72), Expect = 1.2 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = -3 Query: 623 TVRIFNYIGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKS 474 T R++++ + IY + V CVK+ + YL +GS D +RLW + Sbjct: 407 TARLWSFDRTYPLRIY-AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
>TAF5L_HUMAN (O75529) TAF5-like RNA polymerase II p300/CBP-associated| factor-associated factor 65 kDa subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta) Length = 589 Score = 32.3 bits (72), Expect = 1.2 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = -3 Query: 623 TVRIFNYIGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKS 474 T R++++ + IY + V CVK+ + YL +GS D +RLW + Sbjct: 407 TARLWSFDRTYPLRIY-AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
>HIRA_CHICK (P79987) HIRA protein (TUP1-like enhancer of split protein 1)| (CHIRA) Length = 1018 Score = 32.3 bits (72), Expect = 1.2 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNA 468 V CV+++ +G YL SG DD + +WK A Sbjct: 73 VNCVRWSNNGVYLASGGDDKLIMVWKRAA 101
>BOP1_HUMAN (Q14137) Ribosome biogenesis protein BOP1 (Block of proliferation 1| protein) Length = 746 Score = 32.3 bits (72), Expect = 1.2 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWK 477 V C+ + G +LVSGSDD +LRLW+ Sbjct: 416 VRCLSVSPGGQWLVSGSDDGSLRLWE 441
>KTNB1_MOUSE (Q8BG40) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 658 Score = 32.3 bits (72), Expect = 1.2 Identities = 12/35 (34%), Positives = 22/35 (62%) Frame = -3 Query: 560 QRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQL 456 Q V C++++ DG +L S +DD ++LW A + + Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
>KTNB1_BRARE (Q7ZUV2) Katanin p80 WD40-containing subunit B1 homolog| Length = 694 Score = 32.3 bits (72), Expect = 1.2 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = -3 Query: 560 QRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQL 456 Q V C+ ++ DG +L S SDD+ ++LW A + + Sbjct: 148 QAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMI 182
>TBL1X_HUMAN (O60907) F-box-like/WD-repeat protein TBL1X (Transducin beta-like| 1X protein) (Transducin-beta-like 1, X-linked) (SMAP55) Length = 526 Score = 32.0 bits (71), Expect = 1.5 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = -3 Query: 572 TKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNA 468 TK + V+ V ++ DG YL SGS D + +W + + Sbjct: 451 TKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQS 485
>TBLX_MOUSE (Q9QXE7) F-box-like/WD-repeat protein TBL1X (Transducin beta-like| 1X protein) Length = 527 Score = 32.0 bits (71), Expect = 1.5 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = -3 Query: 572 TKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNA 468 TK + V+ V ++ DG YL SGS D + +W + + Sbjct: 452 TKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQS 486
>WDR18_MOUSE (Q4VBE8) WD-repeat protein 18| Length = 431 Score = 32.0 bits (71), Expect = 1.5 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = -3 Query: 557 RVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVV 447 +V C+ + DG+ L+SGS D ++RLW + + L V Sbjct: 271 QVTCLSVSTDGSVLLSGSHDESVRLWDVKSKQCLRTV 307
>KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 657 Score = 31.6 bits (70), Expect = 2.0 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = -3 Query: 560 QRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASE 462 Q V C++++ DG +L S +DD ++LW A + Sbjct: 147 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 179
>ZN313_RAT (Q6J2U6) Zinc finger protein 313| Length = 229 Score = 31.6 bits (70), Expect = 2.0 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +1 Query: 121 CHLSHSIKN*TPXIPLCLASPWSDPPY 201 C L+HS + P+C + PW DP Y Sbjct: 161 CKLTHSTDTKSVVCPICASMPWGDPSY 187
>ZN313_MOUSE (Q9ET26) Zinc finger protein 313| Length = 229 Score = 31.6 bits (70), Expect = 2.0 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +1 Query: 121 CHLSHSIKN*TPXIPLCLASPWSDPPY 201 C L+HS + P+C + PW DP Y Sbjct: 161 CKLTHSTDTKSVVCPICASMPWGDPSY 187
>THIC_VIBCH (Q9KVS8) Thiamine biosynthesis protein thiC| Length = 645 Score = 31.6 bits (70), Expect = 2.0 Identities = 18/36 (50%), Positives = 21/36 (58%) Frame = -3 Query: 440 RERKKQEYLDAVKLRYGHLPEIRRIVKHKHVPKPIY 333 RER E LD +LRYGHLP IRR + V + Y Sbjct: 115 RERLADETLD--ELRYGHLPRIRRAMGQHRVTQLHY 148
>HIRA_FUGRU (O42611) HIRA protein (TUP1-like enhancer of split protein 1)| Length = 1025 Score = 31.6 bits (70), Expect = 2.0 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNA 468 V CV+++ +G YL SG DD + +WK A Sbjct: 73 VNCVRWSNNGLYLASGGDDKLVMVWKRAA 101
>TB1RB_XENLA (Q6GPC6) F-box-like/WD-repeat-containing protein TBL1XR1-B| (Transducin beta-like 1X-related homolog 1-B) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1-B) (TBL1-related protein 1-B) Length = 522 Score = 31.6 bits (70), Expect = 2.0 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -3 Query: 572 TKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKS 474 TK + V+ V ++ DG YL SGS D + +W + Sbjct: 447 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNT 479
>TBL1R_MOUSE (Q8BHJ5) F-box-like/WD-repeat protein TBL1XR1 (Transducin beta-like| 1X-related protein 1) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1) (TBL1-related protein 1) Length = 514 Score = 31.6 bits (70), Expect = 2.0 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -3 Query: 572 TKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKS 474 TK + V+ V ++ DG YL SGS D + +W + Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNT 471
>TBL1R_HUMAN (Q9BZK7) F-box-like/WD-repeat protein TBL1XR1 (Transducin beta-like| 1X-related protein 1) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1) (TBL1-related protein 1) Length = 514 Score = 31.6 bits (70), Expect = 2.0 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -3 Query: 572 TKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKS 474 TK + V+ V ++ DG YL SGS D + +W + Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNT 471
>TB1RA_XENLA (Q7SZM9) F-box-like/WD-repeat-containing protein TBL1XR1-A| (Transducin beta-like 1X-related protein 1-A) (Nuclear receptor corepressor/HDAC3 complex subunit TBLR1-A) (TBL1-related protein 1-A) (xTBLR1) Length = 519 Score = 31.6 bits (70), Expect = 2.0 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -3 Query: 572 TKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKS 474 TK + V+ V ++ DG YL SGS D + +W + Sbjct: 444 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNT 476
>YH92_CAEEL (Q23256) Hypothetical WD-repeat protein ZC302.2| Length = 501 Score = 31.2 bits (69), Expect = 2.6 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 8/50 (16%) Frame = -3 Query: 575 HTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLW--------KSNASEQLGV 450 HTK V +K++Y G YL +GS D +++W ++ AS QLG+ Sbjct: 212 HTKS---VSVIKFSYCGKYLGTGSADKQIKVWNTVDMTYLQTLASHQLGI 258
>HIRA_HUMAN (P54198) HIRA protein (TUP1-like enhancer of split protein 1)| Length = 1017 Score = 31.2 bits (69), Expect = 2.6 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWK 477 V CV+++ G YL SG DD + +WK Sbjct: 73 VNCVRWSNSGMYLASGGDDKLIMVWK 98
>GBB_SOLTU (P93563) Guanine nucleotide-binding protein beta subunit| Length = 377 Score = 31.2 bits (69), Expect = 2.6 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = -3 Query: 557 RVFCVKYTYDGTYLVSGSDDTNLRLW 480 R+ C+ + DG+ L +GS DTNL++W Sbjct: 343 RISCLGLSADGSALCTGSWDTNLKIW 368
>GBB2_TOBAC (P93398) Guanine nucleotide-binding protein beta subunit 2| Length = 377 Score = 31.2 bits (69), Expect = 2.6 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = -3 Query: 557 RVFCVKYTYDGTYLVSGSDDTNLRLW 480 R+ C+ + DG+ L +GS DTNL++W Sbjct: 343 RISCLGLSADGSALCTGSWDTNLKIW 368
>GBB1_TOBAC (P93397) Guanine nucleotide-binding protein beta subunit 1| Length = 377 Score = 31.2 bits (69), Expect = 2.6 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = -3 Query: 557 RVFCVKYTYDGTYLVSGSDDTNLRLW 480 R+ C+ + DG+ L +GS DTNL++W Sbjct: 343 RISCLGLSADGSALCTGSWDTNLKIW 368
>HIRA_MOUSE (Q61666) HIRA protein (TUP1-like enhancer of split protein 1)| Length = 1015 Score = 31.2 bits (69), Expect = 2.6 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWK 477 V CV+++ G YL SG DD + +WK Sbjct: 73 VNCVRWSNSGMYLASGGDDKLIMVWK 98
>YDSB_SCHPO (O14186) Hypothetical WD-repeat protein C4F8.11 in chromosome I| Length = 846 Score = 31.2 bits (69), Expect = 2.6 Identities = 11/36 (30%), Positives = 22/36 (61%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVV 447 V CV Y+ +G +L S D +R+W S ++++ ++ Sbjct: 224 VLCVNYSPNGVFLASCGRDKTIRIWDSTSNKKKSLI 259
>YKM1_YEAST (P32330) Hypothetical WD repeat-containing protein YKL121w| Length = 852 Score = 31.2 bits (69), Expect = 2.6 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWK 477 + C +++DG Y+V G D +L LWK Sbjct: 176 ICCCTFSHDGKYMVIGCKDGSLHLWK 201
>HIRA_DROME (O17468) HIRA protein homolog (dHIRA)| Length = 1047 Score = 31.2 bits (69), Expect = 2.6 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNA 468 V CV+++ +G L SGSDD + +W+ +A Sbjct: 73 VNCVRWSQNGQNLASGSDDKLIMIWRKSA 101
>TUP11_SCHPO (Q09715) Transcriptional repressor tup11| Length = 614 Score = 31.2 bits (69), Expect = 2.6 Identities = 14/39 (35%), Positives = 24/39 (61%) Frame = -3 Query: 596 DHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLW 480 D SR++Y V + ++ DG YLV+G++D ++LW Sbjct: 356 DPSRDLY-------VRTIAFSPDGKYLVTGTEDRQIKLW 387 Score = 30.0 bits (66), Expect = 5.8 Identities = 10/27 (37%), Positives = 19/27 (70%) Frame = -3 Query: 560 QRVFCVKYTYDGTYLVSGSDDTNLRLW 480 Q ++ + ++++G ++VSGS D RLW Sbjct: 403 QDIYSLDFSHNGRFIVSGSGDRTARLW 429 Score = 29.3 bits (64), Expect = 9.9 Identities = 10/37 (27%), Positives = 24/37 (64%) Frame = -3 Query: 560 QRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGV 450 + V+ + ++ D + L+SGS D +++W+ A+ +G+ Sbjct: 485 ESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGL 521
>DMXL1_MOUSE (Q6PNC0) Protein DmX-like 1 (X-like 1 protein)| Length = 3013 Score = 30.8 bits (68), Expect = 3.4 Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Frame = -3 Query: 581 IYHTKRMQRVFCVKYTYDGTYLVS-GSDDTNLRLWKSNASEQLGVVLPRERKKQEYLDAV 405 I+H K +V +K++ DG + + G DD L++W + + + V P + +++ + Sbjct: 160 IWHCKTASQVHLMKFSPDGEFFATAGKDDCLLKVWYNVENWRPAVTSPDKNSEKQSQGEI 219 Query: 404 KLRYGHLPEIRRI 366 + +L R + Sbjct: 220 DFSFVYLAHPRAV 232
>KTNB1_STRPU (O61585) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 690 Score = 30.8 bits (68), Expect = 3.4 Identities = 11/26 (42%), Positives = 20/26 (76%) Frame = -3 Query: 557 RVFCVKYTYDGTYLVSGSDDTNLRLW 480 +V +K++ DG +LV+ S+DT ++LW Sbjct: 145 QVNMIKFSPDGKWLVTASEDTTIKLW 170
>CORO_YEAST (Q06440) Coronin-like protein| Length = 651 Score = 30.8 bits (68), Expect = 3.4 Identities = 14/48 (29%), Positives = 27/48 (56%) Frame = -3 Query: 623 TVRIFNYIGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLW 480 TV+++N + +++ K V + ++YDG YL + + D LR+W Sbjct: 164 TVKLWNV--ETGKDMITLKHPDMVTSMSFSYDGNYLATVARDKKLRVW 209
>WDR18_RAT (Q499N3) WD-repeat protein 18| Length = 431 Score = 30.8 bits (68), Expect = 3.4 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = -3 Query: 557 RVFCVKYTYDGTYLVSGSDDTNLRLW 480 +V C+ + DG+ L+SGS D ++RLW Sbjct: 271 QVTCLSVSTDGSILLSGSHDESVRLW 296
>NUDF_EMENI (Q00664) Nuclear migration protein nudF| Length = 444 Score = 30.8 bits (68), Expect = 3.4 Identities = 17/62 (27%), Positives = 31/62 (50%) Frame = -3 Query: 545 VKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVVLPRERKKQEYLDAVKLRYGHLPEIRRI 366 V ++DG +LVSG D + +W+ +++E +L E + + A Y HL + + Sbjct: 251 VSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASYEHLATLAGL 310 Query: 365 VK 360 K Sbjct: 311 KK 312
>IF32_MOUSE (Q9QZD9) Eukaryotic translation initiation factor 3 subunit 2| (eIF-3 beta) (eIF3 p36) (eIF3i) (TGF-beta receptor-interacting protein 1) (TRIP-1) Length = 325 Score = 30.8 bits (68), Expect = 3.4 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVV 447 V+CV +D ++++GS D + RLW +QL ++ Sbjct: 55 VWCVDADWDTKHVLTGSADNSCRLWDCETGKQLALL 90
>IF32_HUMAN (Q13347) Eukaryotic translation initiation factor 3 subunit 2| (eIF-3 beta) (eIF3 p36) (eIF3i) (TGF-beta receptor-interacting protein 1) (TRIP-1) Length = 325 Score = 30.8 bits (68), Expect = 3.4 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVV 447 V+CV +D ++++GS D + RLW +QL ++ Sbjct: 55 VWCVDADWDTKHVLTGSADNSCRLWDCETGKQLALL 90
>IF32_BOVIN (Q5E966) Eukaryotic translation initiation factor 3 subunit 2| (eIF-3 beta) (eIF3 p36) Length = 325 Score = 30.8 bits (68), Expect = 3.4 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVV 447 V+CV +D ++++GS D + RLW +QL ++ Sbjct: 55 VWCVDADWDTKHVLTGSADNSCRLWDCETGKQLALL 90
>CAF1B_HUMAN (Q13112) Chromatin assembly factor 1 subunit B (CAF-1 subunit B)| (Chromatin assembly factor I p60 subunit) (CAF-I 60 kDa subunit) (CAF-Ip60) (M-phase phosphoprotein 7) Length = 559 Score = 30.8 bits (68), Expect = 3.4 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 4/71 (5%) Frame = -3 Query: 575 HTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVVLPRERKK----QEYLDA 408 HTK + V+++ G L SG DD + LWK N +++ + ++ + +E Sbjct: 65 HTKAVN---VVRFSPTGEILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKENWTV 121 Query: 407 VKLRYGHLPEI 375 VK GHL ++ Sbjct: 122 VKTLRGHLEDV 132
>TRCB_XENLA (Q91854) Beta-TrCP (Beta-transducin repeat-containing protein)| Length = 518 Score = 30.4 bits (67), Expect = 4.4 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVVL 444 V C++Y D +++GS D+ +R+W N E L ++ Sbjct: 275 VLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLI 309
>SIF2_YEAST (P38262) SIR4-interacting protein SIF2| Length = 535 Score = 30.4 bits (67), Expect = 4.4 Identities = 11/35 (31%), Positives = 21/35 (60%) Frame = -3 Query: 569 KRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNAS 465 K +V C+ +++DG +V+G ++ LRLW + Sbjct: 218 KTTNQVTCLAWSHDGNSIVTGVENGELRLWNKTGA 252
>FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein 7)| (Protein archipelago) Length = 1326 Score = 30.4 bits (67), Expect = 4.4 Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 10/49 (20%) Frame = -3 Query: 596 DHSREIYHTKRMQ----------RVFCVKYTYDGTYLVSGSDDTNLRLW 480 D+ +I+H +R + RV+ +++ DG ++VSGS DT++R+W Sbjct: 1134 DYMVKIWHPERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVW 1180
>BRWD1_HUMAN (Q9NSI6) Bromodomain and WD-repeat domain-containing protein 1| (WD-repeat protein 9) Length = 2320 Score = 30.4 bits (67), Expect = 4.4 Identities = 14/56 (25%), Positives = 29/56 (51%) Frame = -3 Query: 614 IFNYIGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVV 447 ++ +I H R + H + V+CV + G + +GSDD +++W ++ L + Sbjct: 172 MYQHIKMHRRILGH---LSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNGRLLSTL 224
>WDR26_MOUSE (Q8C6G8) WD-repeat protein 26| Length = 514 Score = 30.4 bits (67), Expect = 4.4 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = -3 Query: 572 TKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQL 456 T+ V+ K++ DGT L +GS DT + +W+ + L Sbjct: 205 TEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHL 243
>WDR26_HUMAN (Q9H7D7) WD-repeat protein 26| Length = 514 Score = 30.4 bits (67), Expect = 4.4 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = -3 Query: 572 TKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQL 456 T+ V+ K++ DGT L +GS DT + +W+ + L Sbjct: 205 TEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHL 243
>TUP1_CANAL (P56093) Transcriptional repressor TUP1| Length = 514 Score = 30.4 bits (67), Expect = 4.4 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = -3 Query: 623 TVRIFNYIGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASE 462 T RI + H ++IY + + DG LVSGS D ++R+W S+ Sbjct: 288 TKRIIKILRGHEQDIYS---------LDFFPDGDRLVSGSGDRSVRIWDLRTSQ 332
>TBL1Y_HUMAN (Q9BQ87) F-box-like/WD-repeat protein TBL1Y (Transducin beta-like| 1Y protein) (Transducin-beta-like 1, Y-linked) Length = 522 Score = 30.4 bits (67), Expect = 4.4 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = -3 Query: 569 KRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNA 468 K + V+ V ++ DG YL SGS D + +W + + Sbjct: 450 KHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQS 483
>WDR1_MOUSE (O88342) WD-repeat protein 1 (Actin-interacting protein 1) (AIP1)| Length = 605 Score = 30.4 bits (67), Expect = 4.4 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = -3 Query: 575 HTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQL 456 +T+ +V KY G Y+ SG LR+W + E L Sbjct: 53 YTEHAHQVVVAKYAPSGFYIASGDISGKLRIWDTTQKEHL 92
>WDR1_HUMAN (O75083) WD-repeat protein 1 (Actin-interacting protein 1) (AIP1)| (NORI-1) Length = 605 Score = 30.4 bits (67), Expect = 4.4 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = -3 Query: 575 HTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQL 456 +T+ +V KY G Y+ SG LR+W + E L Sbjct: 53 YTEHAHQVVVAKYAPSGFYIASGDVSGKLRIWDTTQKEHL 92
>WDR1_CHICK (O93277) WD-repeat protein 1 (Actin-interacting protein 1) (AIP1)| Length = 609 Score = 30.4 bits (67), Expect = 4.4 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = -3 Query: 575 HTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQL 456 +T+ +V KY G Y+ SG LR+W + E L Sbjct: 56 YTEHAHQVVVAKYAPSGFYIASGDVSGKLRIWDTTQKEHL 95
>HIRL_SCHPO (P87314) Histone transcription regulator 1 homolog| Length = 932 Score = 30.4 bits (67), Expect = 4.4 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLW-KSNASEQLGVVLPRERKKQEYLDAVKLRYGHLPE 378 V V+++ +G YL SGSDD + +W K A LG K E + + GH + Sbjct: 77 VTSVRFSPNGQYLASGSDDRVVIIWHKEEAIPGLGSTFGSGEKHTENWRSYRRLLGHDND 136 Query: 377 IR 372 I+ Sbjct: 137 IQ 138
>FBW1A_HUMAN (Q9Y297) F-box/WD-repeat protein 1A (F-box and WD-repeats protein| beta-TrCP) (E3RSIkappaB) (pIkappaBalpha-E3 receptor subunit) Length = 605 Score = 30.4 bits (67), Expect = 4.4 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVVL 444 V C++Y D +++GS D+ +R+W N E L ++ Sbjct: 346 VLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLI 380
>TAF5_YEAST (P38129) Transcription initiation factor TFIID subunit 5| (TBP-associated factor 5) (TBP-associated factor 90 kDa) (TAFII-90) Length = 798 Score = 30.4 bits (67), Expect = 4.4 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQL 456 V+ ++ D YL+SGS+D +RLW + L Sbjct: 528 VYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTAL 560
>SEH1_YEAST (P53011) Nucleoporin SEH1 (Nuclear pore protein SEH1) (SEC13| homolog 1) Length = 349 Score = 30.4 bits (67), Expect = 4.4 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -3 Query: 575 HTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQ 459 H V+ V + GT L S DD +RLWK+ S + Sbjct: 300 HDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNE 338
>BRWD1_MOUSE (Q921C3) Bromodomain and WD-repeat domain-containing protein 1| (WD-repeat protein 9) Length = 2304 Score = 30.4 bits (67), Expect = 4.4 Identities = 14/56 (25%), Positives = 29/56 (51%) Frame = -3 Query: 614 IFNYIGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVV 447 ++ +I H R + H + V+CV + G + +GSDD +++W ++ L + Sbjct: 172 MYQHIKMHRRILGH---LSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNGRLLSTL 224
>WDR22_MOUSE (Q80T85) WD-repeat protein 22| Length = 946 Score = 30.0 bits (66), Expect = 5.8 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -3 Query: 521 YLVSGSDDTNLRLWKSNASEQLG 453 Y++SGSDD NL +WK A + G Sbjct: 294 YILSGSDDFNLYMWKIPADPEAG 316
>MORG1_XENLA (Q3KQ62) Mitogen-activated protein kinase organizer 1 (MAPK| organizer 1) Length = 314 Score = 30.0 bits (66), Expect = 5.8 Identities = 12/43 (27%), Positives = 24/43 (55%) Frame = -3 Query: 557 RVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVVLPRERK 429 +V CV++ + T ++SGS D+++R W + + + E K Sbjct: 111 KVNCVQFNEEATVIISGSIDSSIRCWDCRSRRPDAIQIMDEAK 153
>RCO1_NEUCR (P78706) Transcriptional repressor rco-1| Length = 604 Score = 30.0 bits (66), Expect = 5.8 Identities = 14/58 (24%), Positives = 28/58 (48%) Frame = -3 Query: 620 VRIFNYIGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVV 447 +R+++ R +H Q ++ + ++ DG + SGS D +RLW + V+ Sbjct: 368 IRVWDIQSRTIRNTFHGHE-QDIYSLDFSRDGRTIASGSGDRTVRLWDIETGQNTSVL 424
>FBW1B_HUMAN (Q9UKB1) F-box/WD-repeat protein 11 (F-box/WD-repeat protein 1B)| (F-box and WD-repeats protein beta-TrCP2) Length = 542 Score = 30.0 bits (66), Expect = 5.8 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVVL 444 V C++Y D +V+GS D+ +R+W N E L ++ Sbjct: 283 VLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLI 317
>POF11_SCHPO (Q09855) F-box/WD-repeat protein pof11| Length = 506 Score = 30.0 bits (66), Expect = 5.8 Identities = 16/63 (25%), Positives = 36/63 (57%) Frame = -3 Query: 623 TVRIFNYIGDHSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVVL 444 T+R ++ H I H + + + C +Y +G ++VSGS D +R++++++ + L ++ Sbjct: 370 TLRTWDITTGHCIRIIHAHQ-RGIACAQY--NGKFIVSGSSDLTIRIFEASSGKLLRMLQ 426 Query: 443 PRE 435 E Sbjct: 427 GHE 429
>UTP15_MOUSE (Q8C7V3) U3 small nucleolar RNA-associated protein 15 homolog| (Src-associated protein SAW) Length = 528 Score = 30.0 bits (66), Expect = 5.8 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = -3 Query: 575 HTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQL 456 HTK V V +T D ++VSG+DD ++LW S+++ Sbjct: 121 HTKA---VHTVDFTADNYHVVSGADDYTVKLWDIPNSKEI 157
>CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor| Length = 1690 Score = 30.0 bits (66), Expect = 5.8 Identities = 19/75 (25%), Positives = 31/75 (41%) Frame = +2 Query: 332 CRSAWVRAYV*QSA*FLEGDHTAA*QHLDILAFCVPLEEQLPIVLKHWTSTVEDLYHHCQ 511 C R + S +LEG A Q L + C+P+ LP + + H+ Q Sbjct: 1480 CPLGMPRLWTGYSLLYLEGQEKAHNQDLGLAGSCLPVFSTLPFAY----CNIHQVCHYAQ 1535 Query: 512 KLDRSHHMCISHKTP 556 + DRS+ + + P Sbjct: 1536 RNDRSYWLASAAPLP 1550
>ZN313_PIG (Q6J1I8) Zinc finger protein 313| Length = 228 Score = 30.0 bits (66), Expect = 5.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 121 CHLSHSIKN*TPXIPLCLASPWSDPPY 201 C L HS + P+C + PW DP Y Sbjct: 160 CKLVHSTDTKSVVCPICASMPWGDPNY 186
>ZN313_PANTR (Q6J212) Zinc finger protein 313| Length = 228 Score = 30.0 bits (66), Expect = 5.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 121 CHLSHSIKN*TPXIPLCLASPWSDPPY 201 C L HS + P+C + PW DP Y Sbjct: 160 CKLFHSTDTKSVVCPICASMPWGDPNY 186
>ZN313_HUMAN (Q9Y508) Zinc finger protein 313 (RING finger protein 114)| Length = 228 Score = 30.0 bits (66), Expect = 5.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 121 CHLSHSIKN*TPXIPLCLASPWSDPPY 201 C L HS + P+C + PW DP Y Sbjct: 160 CKLFHSTDTKSVVCPICASMPWGDPNY 186
>TUP1_KLULA (P56094) Transcriptional repressor TUP1| Length = 682 Score = 30.0 bits (66), Expect = 5.8 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = -3 Query: 572 TKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSN 471 T V+ V +T DG +VSGS D +++LW N Sbjct: 536 TGHRDSVYSVVFTRDGKGVVSGSLDRSVKLWNLN 569
>EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi| Length = 700 Score = 30.0 bits (66), Expect = 5.8 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = -3 Query: 572 TKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSNASE 462 TK + V+ V ++ DG +L SGS D + +W + + Sbjct: 624 TKHTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQ 660
>CO4A4_RABIT (P55787) Collagen alpha-4(IV) chain (Fragment)| Length = 623 Score = 29.6 bits (65), Expect = 7.6 Identities = 18/75 (24%), Positives = 31/75 (41%) Frame = +2 Query: 332 CRSAWVRAYV*QSA*FLEGDHTAA*QHLDILAFCVPLEEQLPIVLKHWTSTVEDLYHHCQ 511 C R + S +LEG A Q L + C+P+ LP + + H+ Q Sbjct: 413 CPMGMPRLWTGYSLLYLEGQEKAHNQDLGLAGSCLPIFSTLPFAY----CNIHQVCHYAQ 468 Query: 512 KLDRSHHMCISHKTP 556 + D+S+ + + P Sbjct: 469 RNDKSYWLASAGPLP 483
>GBB_ARATH (P49177) Guanine nucleotide-binding protein beta subunit| (transducin) (AGB1) Length = 377 Score = 29.6 bits (65), Expect = 7.6 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = -3 Query: 557 RVFCVKYTYDGTYLVSGSDDTNLRLW 480 R+ C+ + DG+ L +GS D+NL++W Sbjct: 343 RISCLGLSADGSALCTGSWDSNLKIW 368
>TAF73_SCHPO (O74319) Transcription initiation factor TFIID subunit taf73| (Transcription initiation factor TFIID 73 kDa subunit) (TAFII-73) Length = 642 Score = 29.6 bits (65), Expect = 7.6 Identities = 11/37 (29%), Positives = 20/37 (54%) Frame = -3 Query: 590 SREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLW 480 ++ + K V+ + ++YD LVSG DT++ W Sbjct: 562 NQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDVNFW 598
>SEH1L_HUMAN (Q96EE3) Nucleoporin SEH1-like (SEC13-like protein)| Length = 421 Score = 29.6 bits (65), Expect = 7.6 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -3 Query: 557 RVFCVKYTYDGTYLVSGSDDTNLRLWKSN 471 +V+ V + GT L S DD +RLWK+N Sbjct: 280 QVWRVSWNITGTVLASSGDDGCVRLWKAN 308
>CY552_MARHY (P82903) Cytochrome c-552 (Cytochrome c552)| Length = 88 Score = 29.6 bits (65), Expect = 7.6 Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Frame = -1 Query: 370 GLSNISTYPSRSTRQARYGVP*LK-QKAGKKKEGERTVLQG 251 G+S + YP+ + ++ +Y V LK KAG+++ G+ V+QG Sbjct: 22 GISQVPIYPNLAGQKEQYLVAALKAYKAGQRQGGQAPVMQG 62
>IF122_HUMAN (Q9HBG6) Intraflagellar transport 122 homolog (WD-repeat protein| 10) Length = 1242 Score = 29.6 bits (65), Expect = 7.6 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKS 474 V+CV Y DG SGS D ++ +W S Sbjct: 56 VYCVAYAKDGKRFASGSADKSVIIWTS 82
>BOP1_MOUSE (P97452) Ribosome biogenesis protein BOP1 (Block of proliferation 1| protein) Length = 732 Score = 29.3 bits (64), Expect = 9.9 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWK 477 V C+ + G +L SGSDD L+LW+ Sbjct: 402 VRCLSVSPGGQWLASGSDDGTLKLWE 427
>MORG1_XENTR (Q5XGI5) Mitogen-activated protein kinase organizer 1 (MAPK| organizer 1) Length = 314 Score = 29.3 bits (64), Expect = 9.9 Identities = 12/43 (27%), Positives = 24/43 (55%) Frame = -3 Query: 557 RVFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVVLPRERK 429 +V CV++ + T ++SGS D+++R W + + + E K Sbjct: 111 KVNCVQFNEEATVIMSGSIDSSIRCWDCRSRRPEAIQILDEAK 153
>APAF_HUMAN (O14727) Apoptotic protease-activating factor 1 (Apaf-1)| Length = 1248 Score = 29.3 bits (64), Expect = 9.9 Identities = 12/38 (31%), Positives = 20/38 (52%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNASEQLGVVLP 441 V C ++ D T L +G D+ +R+W + E L + P Sbjct: 1130 VRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAP 1167
>CO4A6_HUMAN (Q14031) Collagen alpha-6(IV) chain precursor| Length = 1691 Score = 29.3 bits (64), Expect = 9.9 Identities = 17/76 (22%), Positives = 33/76 (43%) Frame = +2 Query: 329 PCRSAWVRAYV*QSA*FLEGDHTAA*QHLDILAFCVPLEEQLPIVLKHWTSTVEDLYHHC 508 PC + +V S F+EG A Q L C+P +P + + ++ H+ Sbjct: 1481 PCPIGMSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIY----CNINEVCHYA 1536 Query: 509 QKLDRSHHMCISHKTP 556 ++ D+S+ + + P Sbjct: 1537 RRNDKSYWLSTTAPIP 1552
>Y1410_SYNY3 (P73595) Hypothetical WD-repeat protein slr1410| Length = 334 Score = 29.3 bits (64), Expect = 9.9 Identities = 11/35 (31%), Positives = 21/35 (60%) Frame = -3 Query: 575 HTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWKSN 471 HT + + + + Y+ DG YL+S + D +LW ++ Sbjct: 54 HTLKGEAIIQIHYSQDGNYLLSTATDGLAKLWTAD 88
>GBB_NICPL (P93339) Guanine nucleotide-binding protein beta subunit (NpGPB1)| Length = 377 Score = 29.3 bits (64), Expect = 9.9 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLW 480 + C+ + DG L +GS DTNL++W Sbjct: 344 ISCLGLSADGXXLCTGSWDTNLKIW 368
>YIRF_SCHPO (Q9P7I3) Hypothetical WD-repeat protein C664.15 in chromosome I| Length = 651 Score = 29.3 bits (64), Expect = 9.9 Identities = 14/50 (28%), Positives = 29/50 (58%) Frame = -3 Query: 533 YDGTYLVSGSDDTNLRLWKSNASEQLGVVLPRERKKQEYLDAVKLRYGHL 384 +D +L SGS D ++R+W + + ++ P E+K +++++L G L Sbjct: 544 FDSNHLYSGSYDNSVRIWDLRSGSPINII-PMEKK----VNSLRLYQGRL 588
>WDR20_HUMAN (Q8TBZ3) WD-repeat protein 20 (DMR protein)| Length = 569 Score = 29.3 bits (64), Expect = 9.9 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Frame = -3 Query: 620 VRIFNYIGDHSREIYHTKRMQ--RVFCVKYTYDGTYLVSGSDDTNLRLW 480 +R+FN+ S E++ T + + CV ++ DG Y+V+G +D + +W Sbjct: 244 LRVFNF---DSVELHGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVW 289
>CO4A4_BOVIN (Q29442) Collagen alpha-4(IV) chain (Fragment)| Length = 453 Score = 29.3 bits (64), Expect = 9.9 Identities = 18/75 (24%), Positives = 31/75 (41%) Frame = +2 Query: 332 CRSAWVRAYV*QSA*FLEGDHTAA*QHLDILAFCVPLEEQLPIVLKHWTSTVEDLYHHCQ 511 C R + S +LEG A Q L + C+P+ LP + + H+ + Sbjct: 243 CPMGMPRLWTGYSLLYLEGQERAHNQDLGLAGSCLPIFSTLPFAY----CNIHQVCHYAR 298 Query: 512 KLDRSHHMCISHKTP 556 + DRS+ + + P Sbjct: 299 RNDRSYWLASTAPLP 313
>WDS_DROME (Q9V3J8) Protein will die slowly| Length = 361 Score = 29.3 bits (64), Expect = 9.9 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -3 Query: 545 VKYTYDGTYLVSGSDDTNLRLWKSNASEQL 456 V ++ D LVSGSDD L++W+ + + L Sbjct: 120 VAWSSDSRLLVSGSDDKTLKVWELSTGKSL 149
>PWP2_CAEEL (P91341) Periodic tryptophan protein 2 homolog| Length = 910 Score = 29.3 bits (64), Expect = 9.9 Identities = 9/31 (29%), Positives = 21/31 (67%) Frame = -3 Query: 557 RVFCVKYTYDGTYLVSGSDDTNLRLWKSNAS 465 R+ +Y+ DG+ + +G++D +++W S +S Sbjct: 362 RITTAEYSPDGSLMATGAEDGKVKIWNSRSS 392
>PFS2_YEAST (P42841) Protein PFS2| Length = 465 Score = 29.3 bits (64), Expect = 9.9 Identities = 10/30 (33%), Positives = 20/30 (66%) Frame = -3 Query: 554 VFCVKYTYDGTYLVSGSDDTNLRLWKSNAS 465 V +KY++D +++SG D +++W+ N S Sbjct: 138 VTTMKYSHDSDWMISGDADGMIKIWQPNFS 167
>NLE1_PONPY (Q5RFF8) Notchless homolog 1| Length = 484 Score = 29.3 bits (64), Expect = 9.9 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -3 Query: 560 QRVFCVKYTYDGTYLVSGSDDTNLRLW 480 + V V ++ G YL SGS DT +R W Sbjct: 114 EAVISVAFSPTGKYLASGSGDTTVRFW 140
>NLE1_MOUSE (Q8VEJ4) Notchless homolog 1| Length = 484 Score = 29.3 bits (64), Expect = 9.9 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -3 Query: 560 QRVFCVKYTYDGTYLVSGSDDTNLRLW 480 + V V ++ G YL SGS DT +R W Sbjct: 114 EAVISVAFSPTGKYLASGSGDTTVRFW 140
>NLE1_HUMAN (Q9NVX2) Notchless homolog 1| Length = 484 Score = 29.3 bits (64), Expect = 9.9 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -3 Query: 560 QRVFCVKYTYDGTYLVSGSDDTNLRLW 480 + V V ++ G YL SGS DT +R W Sbjct: 114 EAVISVAFSPTGKYLASGSGDTTVRFW 140
>NLE1_BOVIN (Q58D20) Notchless homolog 1| Length = 485 Score = 29.3 bits (64), Expect = 9.9 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -3 Query: 560 QRVFCVKYTYDGTYLVSGSDDTNLRLW 480 + V V ++ G YL SGS DT +R W Sbjct: 115 EAVISVAFSPTGKYLASGSGDTTVRFW 141
>TIPD_DICDI (O15736) Protein tipD| Length = 612 Score = 29.3 bits (64), Expect = 9.9 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -3 Query: 527 GTYLVSGSDDTNLRLWKSNASEQLGVV 447 GT+L SG D ++R W SNA E V+ Sbjct: 461 GTHLASGHVDHSVRFWDSNAGEPTQVL 487 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,487,547 Number of Sequences: 219361 Number of extensions: 1796449 Number of successful extensions: 5507 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 4834 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5507 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5710231900 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
