>SLSG3_BRAOL (P17840) S-locus-specific glycoprotein S13 precursor (SLSG-13)|
           (Fragment)
          Length = 434

 Score = 37.4 bits (85), Expect = 0.038
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +1

Query: 511 YYVGIWYKNIPEDNCVWVANRAMPITD 591
           +Y+GIWYK  P    VWVANR  P+++
Sbjct: 68  WYLGIWYKKFPYRTYVWVANRDNPLSN 94

>SLSG4_BRAOL (P17841) S-locus-specific glycoprotein S14 precursor (SLSG-14)|
           (Fragment)
          Length = 434

 Score = 36.6 bits (83), Expect = 0.065
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 511 YYVGIWYKNIPEDNCVWVANRAMPIT 588
           +Y+GIWYK + +   VWVANR  P++
Sbjct: 66  WYLGIWYKKVSDRTYVWVANRDNPLS 91

>SLSG2_BRAOA (P22553) S-locus-specific glycoprotein BS29-2 precursor|
          Length = 435

 Score = 36.2 bits (82), Expect = 0.085
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 511 YYVGIWYKNIPEDNCVWVANRAMPIT 588
           +Y+G+WYK + E   VWVANR  P++
Sbjct: 68  WYLGMWYKKLSERTYVWVANRDNPLS 93

>SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor|
           precursor (EC 2.7.11.1) (S-receptor kinase) (SRK)
          Length = 849

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +1

Query: 511 YYVGIWYKNIPEDNCVWVANRAMPITD 591
           +Y+G+WYK + +   VWVANR  P+++
Sbjct: 68  WYLGMWYKKVSDRTYVWVANRDNPLSN 94

>SLSG6_BRAOL (P07761) S-locus-specific glycoprotein S6 precursor (SLSG-6)|
          Length = 436

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +1

Query: 511 YYVGIWYKNIPEDNCVWVANRAMPITD 591
           +Y+GIWYK + +   VWVANR  P+++
Sbjct: 69  WYLGIWYKKLLDRTYVWVANRDNPLSN 95

>YDZ5_SCHPO (O13712) Protein C14C4.05c in chromosome I|
          Length = 844

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
 Frame = +2

Query: 290 SISQFHSSLQQWIPFPYTQSSGLFVGH----FGYSRSVHHPAAAFFPTSRFLLEAPSPPM 457
           S S  H       P P +QSS +FV H    +  + S+H P    F T+ F LEA +   
Sbjct: 336 SFSWTHPKKNSSSPLPQSQSSSIFVEHLNQLYEANASIHRPVNPAFSTN-FGLEASNTST 394

Query: 458 TALLPWDSSPCPAPAQNITTSAYGTRT 538
                +DS      + N  +S  G  T
Sbjct: 395 PEKKKFDSQKPDDDSVNEISSDLGLST 421

>ZAN_RABIT (P57999) Zonadhesin (Fragment)|
          Length = 2282

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = -2

Query: 568  WQPTHSCLRVCSCTICRRSNVLCWSWTGRRIPGQKCRHRR*WCFQQKAACREEG 407
            W   ++C R+C+C++   +N+ C     +  PGQ+C     W       CR+ G
Sbjct: 1338 WYTDNTCSRLCTCSL--HNNITCRQTACK--PGQQC-----WAVDGLLRCRDSG 1382

>MEGF6_HUMAN (O75095) Multiple epidermal growth factor-like domains 6 precursor|
            (EGF-like domain-containing protein 3) (Multiple EGF-like
            domain protein 3)
          Length = 1229

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
 Frame = -2

Query: 550  CLRVCSCTI---CRRSNVLCWSWTGRRIP--GQKCRHRR*WCFQQKAACREEGGC 401
            C   C+CT    C   N  C    GRR P   +KC  R       +A CR  GGC
Sbjct: 851  CRSACNCTAGAACDAVNGSCLCPAGRRGPRCAEKCLPR-----DVRAGCRHSGGC 900

>TF65_MOUSE (Q04207) Transcription factor p65 (Nuclear factor NF-kappa-B p65|
           subunit)
          Length = 549

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
 Frame = +2

Query: 272 PRQFFASISQFHSSLQQWIPFPYTQSSGLFVGHFGY-------SRSVHHPAAAFFPTSRF 430
           P +  A  ++  +S+ +  P PYT  + L   +F         S  + + A A  P+S  
Sbjct: 327 PTRRIAVPTRNSTSVPKPAPQPYTFPASLSTINFDEFSPMLLPSGQISNQALALAPSSAP 386

Query: 431 LLEAPSPPMTALLPWDSSPCPAPAQNITTSAYGTRTYPKTTVCGLPTV 574
           +L     P +A++P    P PAP          +   PK+T  G  T+
Sbjct: 387 VLAQTMVPSSAMVPLAQPPAPAPVLTPGPPQSLSAPVPKSTQAGEGTL 434

>SDK_CAEBR (Q60ZN5) Protein sidekick homolog precursor (Neuronal IgCAM protein|
            4)
          Length = 2322

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 35/161 (21%), Positives = 53/161 (32%), Gaps = 5/161 (3%)
 Frame = +2

Query: 104  VHHIPGDSNQPNIFKLPXKHLSLTTSKIPTFPVASCGKRSPNKMXXXXXXXXX-----XX 268
            + +IP D  +P  +        L  S    F V +  K  P K                 
Sbjct: 700  IDNIPKDDGKPCCW---ADIEDLRPSSTAEFRVVASNKHGPGKPSLPSSSVTMPQQPPSA 756

Query: 269  XPRQFFASISQFHSSLQQWIPFPYTQSSGLFVGHFGYSRSVHHPAAAFFPTSRFLLEAPS 448
             PR   AS    HS + QW      Q SG F+G+    R   + +  +   +    +A +
Sbjct: 757  APRNVAASARSPHSVMVQWQQPKEEQDSGDFLGYVVRYRLAGYSSLTWNEKNLTTKDARN 816

Query: 449  PPMTALLPWDSSPCPAPAQNITTSAYGTRTYPKTTVCGLPT 571
              +  L+ W        A N       + +   TT  G PT
Sbjct: 817  TLVDELITWREYEIQVAAYNKRGLGVFSESIEVTTAEGRPT 857

>PTTG1_RAT (P97613) Securin (Pituitary tumor-transforming protein 1)|
          Length = 199

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 434 LEAPSPPMTALLPWDSSPCPAP 499
           L+ PSP     LPW+S P P+P
Sbjct: 158 LDPPSPLQKPFLPWESDPLPSP 179

>CELA_ACEXY (P27897) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)|
           (UDP-glucose pyrophosphorylase) (UDPGP)
           (Alpha-D-glucosyl-1-phosphate uridylyltransferase)
           (Uridine diphosphoglucose pyrophosphorylase)
          Length = 284

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -3

Query: 285 KNCLGQCKSELRQSQSSILFGLLFPQEATGKVGILEVVKE 166
           K+C+GQ      ++  ++L     P+E TG  GIL+V K+
Sbjct: 141 KSCIGQLVEVYNKTGGNVLAVTEVPREQTGSYGILDVGKD 180

>ZAN_HUMAN (Q9Y493) Zonadhesin precursor|
          Length = 2812

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = -2

Query: 568  WQPTHSCLRVCSCTICRRSNVLCWSWTGRRIPGQKCRHRR*WCFQQKAACREEG 407
            W   ++C R+C+C++   +N+ C+  T +  P Q C     W       CR  G
Sbjct: 1883 WYTENTCTRLCTCSV--HNNITCFQSTCK--PNQIC-----WALDGLLHCRASG 1927

>POLN_FCVUR (Q66914) Non-structural polyprotein [Contains: p5.6; p32; Helicase|
            (2C-like protein) (p39); 3A-like protein (p30); Viral
            genome-linked protein (VPg) (p13); Thiol protease P3C (EC
            3.4.22.-) (3C-like protease) (3C-pro); RNA-directed RNA
            polymera
          Length = 1763

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 320  QWIPFPYTQSSGLFVGHFGYSRSVHHPAAAFFP 418
            +W P PYT +SG  VG F  + +  HP     P
Sbjct: 1164 EWKPKPYTTTSGKIVGCFATTSTETHPGDCGLP 1196

>CAPP_STRP8 (Q8P1W7) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 920

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = +2

Query: 341 TQSSGLFVGHFGYSRSVHHPAAAFFPTSRFLLEAPSPPMTALLPWDSSPCPAPA 502
           +Q   ++ G+  Y R+ H+  +    T   L   P+  M++ +  ++S CP+PA
Sbjct: 308 SQDQSIYRGNEPYRRAFHYIQSCLKQTQIQLTNQPAARMSSSVGLNTSACPSPA 361

>ZFP42_MOUSE (P22227) Zinc finger protein 42 (Zfp-42) (REX-1 protein) (Reduced|
           expression-1 protein)
          Length = 288

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 468 CPGILLPVQLQHKTLLRRHMVQEHTRRQLCVGC 566
           CP      +L+ KT LR+HM+    RR +C  C
Sbjct: 172 CPQAGCKKKLRGKTALRKHMLVHGPRRHVCAEC 204

>MUC1_YEAST (P08640) Mucin-like protein 1 precursor|
          Length = 1367

 Score = 25.4 bits (54), Expect(2) = 9.1
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
 Frame = +2

Query: 329 PFPYTQSSGLFVGHFGYSRSVHHPAAAFFPT-SRFLLEAPSPPMTALLPWDSS-PCPAPA 502
           P P   SS         + S    ++A  PT S    E+ S P+T+     SS P P P+
Sbjct: 526 PAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTPS 585

Query: 503 QNITTSAYGTRTYPKTTVCGLPTVPCP 583
            + T S+      P ++     + P P
Sbjct: 586 SSTTESSSAPVPTPSSSTTESSSAPAP 612



 Score = 22.3 bits (46), Expect(2) = 9.1
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 207 PVEKGAQIKCLTDSASVLICIVQGSSL-LPYPSSIVHYSNGSPSPT 341
           PV   +     + SA V     + SS  +P PSS    S+ +P+PT
Sbjct: 484 PVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPAPT 529


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,407,275
Number of Sequences: 219361
Number of extensions: 2220976
Number of successful extensions: 6722
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6711
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)