ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6f09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469024.1| Oryza sativa (japonica cultivar-group), mRNA 202 1e-48
2dbj|AK120336.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 1e-48
3gb|AY107260.1| Zea mays PCO071008 mRNA sequence 176 6e-41
4gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 66 1e-07
6gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genom... 66 1e-07
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
8gb|AC125045.4| Mus musculus BAC clone RP23-349M7 from chromosome... 42 2.2
9gb|AC124456.5| Mus musculus BAC clone RP24-134C11 from chromosom... 42 2.2
10emb|CR450787.6| Zebrafish DNA sequence from clone CH211-222O17 i... 42 2.2
11gb|AC013640.7| Homo sapiens chromosome 15, clone RP11-16L14, com... 42 2.2
12dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
13gb|AC093731.2| Homo sapiens BAC clone RP11-12L16 from 2, complet... 42 2.2
14gb|AC007429.11|AC007429 Homo sapiens, clone hRPK.70_A_1, complet... 42 2.2
15gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
16emb|AL954159.4|CNS08CCX Oryza sativa chromosome 12, . BAC OSJNBa... 42 2.2
17emb|AL928751.2|CNS08CBO Oryza sativa chromosome 12, . BAC OSJNBa... 42 2.2
18emb|AL928943.9| Mouse DNA sequence from clone RP23-435J15 on chr... 42 2.2
19gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome 40 8.5
20gb|AY509906.1| Homo sapiens interleukin 26 (IL26) gene, complete... 40 8.5
21emb|CT009536.7| Mouse DNA sequence from clone RP23-25A7 on chrom... 40 8.5
22gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome 40 8.5
23emb|CR848759.4| Zebrafish DNA sequence from clone CH211-229D2 in... 40 8.5
24emb|BX014201.1|CNS08J4D Single read from an extremity of a full-... 40 8.5
25gb|AC110027.5| Homo sapiens chromosome 15, clone RP11-452K20, co... 40 8.5
26gb|AC116345.2| Homo sapiens chromosome 5 clone RP11-232L2, compl... 40 8.5
27gb|AC020942.6| Homo sapiens chromosome 5 clone CTD-2361L15, comp... 40 8.5
28emb|BX248239.12| Zebrafish DNA sequence from clone CH211-213I9 i... 40 8.5
29dbj|AK044575.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 40 8.5
30gb|AC018618.5|AC018618 Homo sapiens chromosome 15, clone RP11-16... 40 8.5
31gb|AC026416.4|AC026416 Homo sapiens chromosome 5 clone CTD-2048J... 40 8.5
32gb|AC007402.3| Homo sapiens BAC clone RP11-545K2 from 2, complet... 40 8.5
33gb|AC007458.14| Homo sapiens 12 BAC RP11-444B24 (Roswell Park Ca... 40 8.5
34gb|AC080032.12| Homo sapiens chromosome 15, clone RP11-349O9, co... 40 8.5
35ref|XM_553420.1| Anopheles gambiae str. PEST ENSANGP00000029202 ... 40 8.5
36emb|AL929530.9| Zebrafish DNA sequence from clone CH211-190H2, c... 40 8.5
37gb|U49510.1|PPU49510 Pichia pastoris DNA polymerase gamma gene, ... 40 8.5 
>ref|XM_469024.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 747

 Score =  202 bits (102), Expect = 1e-48
 Identities = 201/234 (85%)
 Strand = Plus / Minus

                                                                       
Query: 389 gtcattctttagtcagcgcatttggcactttgatgtatggatcatcataacttggaaggg 448
           ||||||||||  ||||| |  ||||||| |||||||||||||||||||| ||||| |  |
Sbjct: 557 gtcattctttgttcagcactcttggcaccttgatgtatggatcatcatagcttgggacag 498

                                                                       
Query: 449 cctctactatggcatctctgttagcaaatggttccgccttgtcttctctcaaagaactgc 508
            ||||| ||||||||||||||||| ||||| ||| | | ||||||||||||| ||| | |
Sbjct: 497 actctattatggcatctctgttagtaaatgtttcaggcctgtcttctctcaatgaattac 438

                                                                       
Query: 509 cagctgcagtatcagctcgaagtgaaggctcaatggattcaagatcaaccgactgaagtt 568
           | || |||||| |||||| ||||||||||||||  ||||||||||| || |  |||||||
Sbjct: 437 ctgccgcagtaccagctctaagtgaaggctcaacagattcaagatcgacggcttgaagtt 378

                                                                 
Query: 569 gcccaaaccagtccaccacctgctgaatcttgggcgcgaactcctcagcctctt 622
           |||||||||| |||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 377 gcccaaaccaatccaccacctgccgaatcttcggcgcgaactcctcagcctctt 324
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>dbj|AK120336.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059M23, full
           insert sequence
          Length = 739

 Score =  202 bits (102), Expect = 1e-48
 Identities = 201/234 (85%)
 Strand = Plus / Minus

                                                                       
Query: 389 gtcattctttagtcagcgcatttggcactttgatgtatggatcatcataacttggaaggg 448
           ||||||||||  ||||| |  ||||||| |||||||||||||||||||| ||||| |  |
Sbjct: 557 gtcattctttgttcagcactcttggcaccttgatgtatggatcatcatagcttgggacag 498

                                                                       
Query: 449 cctctactatggcatctctgttagcaaatggttccgccttgtcttctctcaaagaactgc 508
            ||||| ||||||||||||||||| ||||| ||| | | ||||||||||||| ||| | |
Sbjct: 497 actctattatggcatctctgttagtaaatgtttcaggcctgtcttctctcaatgaattac 438

                                                                       
Query: 509 cagctgcagtatcagctcgaagtgaaggctcaatggattcaagatcaaccgactgaagtt 568
           | || |||||| |||||| ||||||||||||||  ||||||||||| || |  |||||||
Sbjct: 437 ctgccgcagtaccagctctaagtgaaggctcaacagattcaagatcgacggcttgaagtt 378

                                                                 
Query: 569 gcccaaaccagtccaccacctgctgaatcttgggcgcgaactcctcagcctctt 622
           |||||||||| |||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 377 gcccaaaccaatccaccacctgccgaatcttcggcgcgaactcctcagcctctt 324
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>gb|AY107260.1| Zea mays PCO071008 mRNA sequence
          Length = 737

 Score =  176 bits (89), Expect = 6e-41
 Identities = 185/217 (85%)
 Strand = Plus / Minus

                                                                       
Query: 410 ttggcactttgatgtatggatcatcataacttggaagggcctctactatggcatctctgt 469
           ||||||||||||| |||||||||||||||||||||| ||||||   ||||||||||||||
Sbjct: 482 ttggcactttgatatatggatcatcataacttggaatggcctcctttatggcatctctgt 423

                                                                       
Query: 470 tagcaaatggttccgccttgtcttctctcaaagaactgccagctgcagtatcagctcgaa 529
           || | |||| ||| | ||| ||||||||||||||| |  |||| |  ||| |||||| ||
Sbjct: 422 tatcgaatgtttcaggcttatcttctctcaaagaaatatcagccgttgtaccagctctaa 363

                                                                       
Query: 530 gtgaaggctcaatggattcaagatcaaccgactgaagttgcccaaaccagtccaccacct 589
           |||||||||||||||| ||||| || || | |||||||||||||||||| ||||| ||||
Sbjct: 362 gtgaaggctcaatggactcaaggtctactgcctgaagttgcccaaaccaatccacaacct 303

                                                
Query: 590 gctgaatcttgggcgcgaactcctcagcctcttgcgg 626
           |  ||||||||||| |||| ||||| ||||| |||||
Sbjct: 302 gacgaatcttgggctcgaagtcctcggcctcctgcgg 266
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>gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024K17
              map near S16403, complete sequence
          Length = 172238

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                           
Query: 575    accagtccaccacctgctgaatcttgggcgcgaactcctcagcct 619
              |||| |||||||||||| ||||||| |||||||||||||||||||
Sbjct: 106949 accaatccaccacctgccgaatcttcggcgcgaactcctcagcct 106905



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                          
Query: 389    gtcattctttagtcagcgcatttggcactttgatgtatggatcatcataacttggaaggg 448
              ||||||||||  ||||| |  ||||||| |||||||||||||||||||| ||||| |  |
Sbjct: 108347 gtcattctttgttcagcactcttggcaccttgatgtatggatcatcatagcttgggacag 108288

                                  
Query: 449    cctctactatggcatctctg 468
               ||||| |||||||||||||
Sbjct: 108287 actctattatggcatctctg 108268



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                       
Query: 521    cagctcgaagtgaaggctcaatggattcaagatcaaccgactgaagttgcccaaacc 577
              |||||| ||||||||||||||  ||||||||||| || |  ||||||||||||||||
Sbjct: 107396 cagctctaagtgaaggctcaacagattcaagatcgacggcttgaagttgcccaaacc 107340
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                             
Query: 575      accagtccaccacctgctgaatcttgggcgcgaactcctcagcct 619
                |||| |||||||||||| ||||||| |||||||||||||||||||
Sbjct: 24990504 accaatccaccacctgccgaatcttcggcgcgaactcctcagcct 24990460



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 389      gtcattctttagtcagcgcatttggcactttgatgtatggatcatcataacttggaaggg 448
                ||||||||||  ||||| |  ||||||| |||||||||||||||||||| ||||| |  |
Sbjct: 24991902 gtcattctttgttcagcactcttggcaccttgatgtatggatcatcatagcttgggacag 24991843

                                    
Query: 449      cctctactatggcatctctg 468
                 ||||| |||||||||||||
Sbjct: 24991842 actctattatggcatctctg 24991823



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                         
Query: 521      cagctcgaagtgaaggctcaatggattcaagatcaaccgactgaagttgcccaaacc 577
                |||||| ||||||||||||||  ||||||||||| || |  ||||||||||||||||
Sbjct: 24990951 cagctctaagtgaaggctcaacagattcaagatcgacggcttgaagttgcccaaacc 24990895
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>gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete
             sequence
          Length = 170020

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                          
Query: 575   accagtccaccacctgctgaatcttgggcgcgaactcctcagcct 619
             |||| |||||||||||| ||||||| |||||||||||||||||||
Sbjct: 22311 accaatccaccacctgccgaatcttcggcgcgaactcctcagcct 22267



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                         
Query: 389   gtcattctttagtcagcgcatttggcactttgatgtatggatcatcataacttggaaggg 448
             ||||||||||  ||||| |  ||||||| |||||||||||||||||||| ||||| |  |
Sbjct: 23709 gtcattctttgttcagcactcttggcaccttgatgtatggatcatcatagcttgggacag 23650

                                 
Query: 449   cctctactatggcatctctg 468
              ||||| |||||||||||||
Sbjct: 23649 actctattatggcatctctg 23630



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                      
Query: 521   cagctcgaagtgaaggctcaatggattcaagatcaaccgactgaagttgcccaaacc 577
             |||||| ||||||||||||||  ||||||||||| || |  ||||||||||||||||
Sbjct: 22758 cagctctaagtgaaggctcaacagattcaagatcgacggcttgaagttgcccaaacc 22702
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                             
Query: 575      accagtccaccacctgctgaatcttgggcgcgaactcctcagcct 619
                |||| |||||||||||| ||||||| |||||||||||||||||||
Sbjct: 25081821 accaatccaccacctgccgaatcttcggcgcgaactcctcagcct 25081777



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 389      gtcattctttagtcagcgcatttggcactttgatgtatggatcatcataacttggaaggg 448
                ||||||||||  ||||| |  ||||||| |||||||||||||||||||| ||||| |  |
Sbjct: 25083219 gtcattctttgttcagcactcttggcaccttgatgtatggatcatcatagcttgggacag 25083160

                                    
Query: 449      cctctactatggcatctctg 468
                 ||||| |||||||||||||
Sbjct: 25083159 actctattatggcatctctg 25083140



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                         
Query: 521      cagctcgaagtgaaggctcaatggattcaagatcaaccgactgaagttgcccaaacc 577
                |||||| ||||||||||||||  ||||||||||| || |  ||||||||||||||||
Sbjct: 25082268 cagctctaagtgaaggctcaacagattcaagatcgacggcttgaagttgcccaaacc 25082212
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>gb|AC125045.4| Mus musculus BAC clone RP23-349M7 from chromosome 9, complete sequence
          Length = 205064

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 149    aggaaatgacatgtgtttggtccaa 173
              ||||||||| |||||||||||||||
Sbjct: 199540 aggaaatgaaatgtgtttggtccaa 199516
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>gb|AC124456.5| Mus musculus BAC clone RP24-134C11 from chromosome 9, complete sequence
          Length = 148114

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 149   aggaaatgacatgtgtttggtccaa 173
             ||||||||| |||||||||||||||
Sbjct: 54538 aggaaatgaaatgtgtttggtccaa 54514
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>emb|CR450787.6| Zebrafish DNA sequence from clone CH211-222O17 in linkage group 12,
              complete sequence
          Length = 212974

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 136    taaaagcatattaaggaaatg 156
              |||||||||||||||||||||
Sbjct: 124813 taaaagcatattaaggaaatg 124793
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>gb|AC013640.7| Homo sapiens chromosome 15, clone RP11-16L14, complete sequence
          Length = 149555

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 350   atggtaataatatcataattt 370
             |||||||||||||||||||||
Sbjct: 30490 atggtaataatatcataattt 30510
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 306      taagttcaattgtttcaccgt 326
                |||||||||||||||||||||
Sbjct: 14707675 taagttcaattgtttcaccgt 14707655
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>gb|AC093731.2| Homo sapiens BAC clone RP11-12L16 from 2, complete sequence
          Length = 190686

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 140    agcatattaaggaaatgacatgtgt 164
              ||||||||||| |||||||||||||
Sbjct: 106145 agcatattaagtaaatgacatgtgt 106169
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>gb|AC007429.11|AC007429 Homo sapiens, clone hRPK.70_A_1, complete sequence
          Length = 160025

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 350  atggtaataatatcataattt 370
            |||||||||||||||||||||
Sbjct: 8620 atggtaataatatcataattt 8640
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 306      taagttcaattgtttcaccgt 326
                |||||||||||||||||||||
Sbjct: 14661959 taagttcaattgtttcaccgt 14661939
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>emb|AL954159.4|CNS08CCX Oryza sativa chromosome 12, . BAC OSJNBa0057C04 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 131673

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 306   taagttcaattgtttcaccgt 326
             |||||||||||||||||||||
Sbjct: 36410 taagttcaattgtttcaccgt 36430
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>emb|AL928751.2|CNS08CBO Oryza sativa chromosome 12, . BAC OSJNBa0037B01 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 133207

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 306    taagttcaattgtttcaccgt 326
              |||||||||||||||||||||
Sbjct: 111124 taagttcaattgtttcaccgt 111144
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>emb|AL928943.9| Mouse DNA sequence from clone RP23-435J15 on chromosome 2, complete
             sequence
          Length = 160516

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 484   gccttgtcttctctcaaagaactgc 508
             |||||| ||||||||||||||||||
Sbjct: 93144 gccttggcttctctcaaagaactgc 93120
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>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
          Length = 1937111

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 578     agtccaccacctgctgaatc 597
               ||||||||||||||||||||
Sbjct: 1455743 agtccaccacctgctgaatc 1455724
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>gb|AY509906.1| Homo sapiens interleukin 26 (IL26) gene, complete cds
          Length = 33991

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   taaaagcatattaaggaaat 155
             ||||||||||||||||||||
Sbjct: 13442 taaaagcatattaaggaaat 13423
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>emb|CT009536.7| Mouse DNA sequence from clone RP23-25A7 on chromosome 14, complete
             sequence
          Length = 239515

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   ccagaaacataaaagcatat 146
             ||||||||||||||||||||
Sbjct: 73235 ccagaaacataaaagcatat 73216
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>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome
          Length = 1897573

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 578     agtccaccacctgctgaatc 597
               ||||||||||||||||||||
Sbjct: 1448292 agtccaccacctgctgaatc 1448273
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>emb|CR848759.4| Zebrafish DNA sequence from clone CH211-229D2 in linkage group 15,
             complete sequence
          Length = 167536

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   taataatatcataattttga 373
             ||||||||||||||||||||
Sbjct: 13348 taataatatcataattttga 13367
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>emb|BX014201.1|CNS08J4D Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA21BC05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 519

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 cggatcttctgttgcagaca 210
           ||||||||||||||||||||
Sbjct: 350 cggatcttctgttgcagaca 369
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>gb|AC110027.5| Homo sapiens chromosome 15, clone RP11-452K20, complete sequence
          Length = 177770

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 301    ctttgtaagttcaattgtttcacc 324
              ||||||||||||| ||||||||||
Sbjct: 140796 ctttgtaagttcacttgtttcacc 140819
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>gb|AC116345.2| Homo sapiens chromosome 5 clone RP11-232L2, complete sequence
          Length = 161470

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   ctagaagccccccacattcc 128
             ||||||||||||||||||||
Sbjct: 59990 ctagaagccccccacattcc 59971
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>gb|AC020942.6| Homo sapiens chromosome 5 clone CTD-2361L15, complete sequence
          Length = 104995

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   ctagaagccccccacattcc 128
             ||||||||||||||||||||
Sbjct: 92170 ctagaagccccccacattcc 92151
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>emb|BX248239.12| Zebrafish DNA sequence from clone CH211-213I9 in linkage group 2,
             complete sequence
          Length = 200856

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   aaaagcatattaaggaaatg 156
             ||||||||||||||||||||
Sbjct: 78172 aaaagcatattaaggaaatg 78153
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>dbj|AK044575.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
            clone:A930024H23 product:actin-related protein 8 homolog
            (S. cerevisiae), full insert sequence
          Length = 2741

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 127  ccagaaacataaaagcatat 146
            ||||||||||||||||||||
Sbjct: 1948 ccagaaacataaaagcatat 1929
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>gb|AC018618.5|AC018618 Homo sapiens chromosome 15, clone RP11-162I7, complete sequence
          Length = 156542

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 349   aatggtaataatatcataat 368
             ||||||||||||||||||||
Sbjct: 70233 aatggtaataatatcataat 70214
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>gb|AC026416.4|AC026416 Homo sapiens chromosome 5 clone CTD-2048J22, complete sequence
          Length = 104995

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   ctagaagccccccacattcc 128
             ||||||||||||||||||||
Sbjct: 92170 ctagaagccccccacattcc 92151
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>gb|AC007402.3| Homo sapiens BAC clone RP11-545K2 from 2, complete sequence
          Length = 191104

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  aatagaatggtaataatatc 363
            ||||||||||||||||||||
Sbjct: 3528 aatagaatggtaataatatc 3509
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>gb|AC007458.14| Homo sapiens 12 BAC RP11-444B24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 190961

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    taaaagcatattaaggaaat 155
              ||||||||||||||||||||
Sbjct: 159123 taaaagcatattaaggaaat 159142
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>gb|AC080032.12| Homo sapiens chromosome 15, clone RP11-349O9, complete sequence
          Length = 181413

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 301    ctttgtaagttcaattgtttcacc 324
              ||||||||||||| ||||||||||
Sbjct: 110768 ctttgtaagttcacttgtttcacc 110745
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>ref|XM_553420.1| Anopheles gambiae str. PEST ENSANGP00000029202
           (ENSANGG00000022027), partial mRNA
          Length = 376

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 cggatcttctgttgcagaca 210
           ||||||||||||||||||||
Sbjct: 210 cggatcttctgttgcagaca 229
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>emb|AL929530.9| Zebrafish DNA sequence from clone CH211-190H2, complete sequence
          Length = 152963

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   taataatatcataattttga 373
             ||||||||||||||||||||
Sbjct: 20279 taataatatcataattttga 20298
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>gb|U49510.1|PPU49510 Pichia pastoris DNA polymerase gamma gene, complete cds
          Length = 4228

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 187  catccggatcttctgttgca 206
            ||||||||||||||||||||
Sbjct: 1136 catccggatcttctgttgca 1117


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,209,933
Number of Sequences: 3902068
Number of extensions: 5209933
Number of successful extensions: 97273
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97041
Number of HSP's gapped (non-prelim): 231
length of query: 627
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 604
effective length of database: 17,143,297,704
effective search space: 10354551813216
effective search space used: 10354551813216
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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