>MARE2_MOUSE (Q8R001) Microtubule-associated protein RP/EB family member 2|
           (APC-binding protein EB2) (End-binding protein 2) (EB2)
          Length = 326

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 21/54 (38%), Positives = 33/54 (61%)
 Frame = -1

Query: 592 KLRDVEILCQSPEVEHLPIVKAIQKILYASEDDPSTLAEAQAEMVAQQNQIQQQ 431
           KLR++E+LCQ    E+  +V+ + ++LYAS++      E +AE  A   Q QQQ
Sbjct: 270 KLREIELLCQEHGQENDDLVQRLMEVLYASDEQEGQTEEPEAEEQAHDQQPQQQ 323

>MARE2_HUMAN (Q15555) Microtubule-associated protein RP/EB family member 2|
           (APC-binding protein EB2) (End-binding protein 2) (EB2)
          Length = 327

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 22/54 (40%), Positives = 32/54 (59%)
 Frame = -1

Query: 592 KLRDVEILCQSPEVEHLPIVKAIQKILYASEDDPSTLAEAQAEMVAQQNQIQQQ 431
           KLR++E+LCQ    E+  +V+ +  ILYASE+      E +AE  A + Q  QQ
Sbjct: 271 KLREIELLCQEHGQENDDLVQRLMDILYASEEHEGHTEEPEAEEQAHEQQPPQQ 324

>MARE3_RAT (Q5XIT1) Microtubule-associated protein RP/EB family member 3|
           (End-binding protein 3) (EB3) (EB1 protein family member
           3) (EBF3) (RP3)
          Length = 281

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 20/51 (39%), Positives = 33/51 (64%)
 Frame = -1

Query: 595 SKLRDVEILCQSPEVEHLPIVKAIQKILYASEDDPSTLAEAQAEMVAQQNQ 443
           SKLRD+E++CQ  E E+ P++  I  ILYA+E+  +   + + E   Q++Q
Sbjct: 228 SKLRDIELICQEHESENSPVISGIIGILYATEEGFAPPEDDEIEEHQQEDQ 278

>MARE3_MOUSE (Q6PER3) Microtubule-associated protein RP/EB family member 3|
           (End-binding protein 3) (EB3) (EB1 protein family member
           3) (EBF3) (RP3)
          Length = 281

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 20/51 (39%), Positives = 33/51 (64%)
 Frame = -1

Query: 595 SKLRDVEILCQSPEVEHLPIVKAIQKILYASEDDPSTLAEAQAEMVAQQNQ 443
           SKLRD+E++CQ  E E+ P++  I  ILYA+E+  +   + + E   Q++Q
Sbjct: 228 SKLRDIELICQEHESENSPVISGIIGILYATEEGFAPPEDDEIEEHQQEDQ 278

>MARE3_HUMAN (Q9UPY8) Microtubule-associated protein RP/EB family member 3|
           (End-binding protein 3) (EB3) (EB1 protein family member
           3) (EBF3) (RP3)
          Length = 281

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 20/51 (39%), Positives = 33/51 (64%)
 Frame = -1

Query: 595 SKLRDVEILCQSPEVEHLPIVKAIQKILYASEDDPSTLAEAQAEMVAQQNQ 443
           SKLRD+E++CQ  E E+ P++  I  ILYA+E+  +   + + E   Q++Q
Sbjct: 228 SKLRDIELICQEHESENSPVISGIIGILYATEEGFAPPEDDEIEEHQQEDQ 278

>MARE2_CHICK (Q5ZKK1) Microtubule-associated protein RP/EB family member 2|
          Length = 338

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 20/55 (36%), Positives = 32/55 (58%)
 Frame = -1

Query: 592 KLRDVEILCQSPEVEHLPIVKAIQKILYASEDDPSTLAEAQAEMVAQQNQIQQQP 428
           KLR++E+LCQ    E+  +V  + ++LYASE+  S   E + E      Q+ +QP
Sbjct: 271 KLREIELLCQEHGGENNDLVHRLMEVLYASEEHESHTEEHEGE-----EQVHEQP 320

>MARE1_COTJA (Q66T82) Microtubule-associated protein RP/EB family member 1|
          Length = 263

 Score = 35.8 bits (81), Expect = 0.096
 Identities = 14/32 (43%), Positives = 26/32 (81%)
 Frame = -1

Query: 592 KLRDVEILCQSPEVEHLPIVKAIQKILYASED 497
           KLR++E++CQ  E E+ P+++ I +ILYA+++
Sbjct: 215 KLRNIELICQENEGENDPVLQRIVEILYATDE 246

>MARE1_COTCO (Q6V291) Microtubule-associated protein RP/EB family member 1|
          Length = 263

 Score = 35.8 bits (81), Expect = 0.096
 Identities = 14/32 (43%), Positives = 26/32 (81%)
 Frame = -1

Query: 592 KLRDVEILCQSPEVEHLPIVKAIQKILYASED 497
           KLR++E++CQ  E E+ P+++ I +ILYA+++
Sbjct: 215 KLRNIELICQENEGENDPVLQRIVEILYATDE 246

>MARE1_CHICK (Q5ZLC7) Microtubule-associated protein RP/EB family member 1|
          Length = 258

 Score = 35.8 bits (81), Expect = 0.096
 Identities = 14/32 (43%), Positives = 26/32 (81%)
 Frame = -1

Query: 592 KLRDVEILCQSPEVEHLPIVKAIQKILYASED 497
           KLR++E++CQ  E E+ P+++ I +ILYA+++
Sbjct: 210 KLRNIELICQENEGENDPVLQRIVEILYATDE 241

>MARE1_BOVIN (Q3ZBD9) Microtubule-associated protein RP/EB family member 1|
           (APC-binding protein EB1) (End-binding protein 1) (EB1)
          Length = 267

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 14/32 (43%), Positives = 25/32 (78%)
 Frame = -1

Query: 592 KLRDVEILCQSPEVEHLPIVKAIQKILYASED 497
           KLR++E++CQ  E E+ P+++ I  ILYA+++
Sbjct: 219 KLRNIELICQENEGENNPVLQRIVDILYATDE 250

>MARE1_RAT (Q66HR2) Microtubule-associated protein RP/EB family member 1|
           (APC-binding protein EB1) (End-binding protein 1) (EB1)
          Length = 267

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 14/32 (43%), Positives = 25/32 (78%)
 Frame = -1

Query: 592 KLRDVEILCQSPEVEHLPIVKAIQKILYASED 497
           KLR++E++CQ  E E+ P+++ I  ILYA+++
Sbjct: 219 KLRNIELICQENEGENDPVLQRIVDILYATDE 250

>MARE1_PONPY (Q5R7Z5) Microtubule-associated protein RP/EB family member 1|
           (APC-binding protein EB1) (End-binding protein 1) (EB1)
          Length = 267

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 14/32 (43%), Positives = 25/32 (78%)
 Frame = -1

Query: 592 KLRDVEILCQSPEVEHLPIVKAIQKILYASED 497
           KLR++E++CQ  E E+ P+++ I  ILYA+++
Sbjct: 219 KLRNIELICQENEGENDPVLQRIVDILYATDE 250

>MARE1_MOUSE (Q61166) Microtubule-associated protein RP/EB family member 1|
           (APC-binding protein EB1) (End-binding protein 1) (EB1)
          Length = 267

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 14/32 (43%), Positives = 25/32 (78%)
 Frame = -1

Query: 592 KLRDVEILCQSPEVEHLPIVKAIQKILYASED 497
           KLR++E++CQ  E E+ P+++ I  ILYA+++
Sbjct: 219 KLRNIELICQENEGENDPVLQRIVDILYATDE 250

>MARE1_HUMAN (Q15691) Microtubule-associated protein RP/EB family member 1|
           (APC-binding protein EB1) (End-binding protein 1) (EB1)
          Length = 267

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 14/32 (43%), Positives = 25/32 (78%)
 Frame = -1

Query: 592 KLRDVEILCQSPEVEHLPIVKAIQKILYASED 497
           KLR++E++CQ  E E+ P+++ I  ILYA+++
Sbjct: 219 KLRNIELICQENEGENDPVLQRIVDILYATDE 250

>MARE1_XENTR (Q6P848) Microtubule-associated protein RP/EB family member 1|
          Length = 269

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 14/32 (43%), Positives = 25/32 (78%)
 Frame = -1

Query: 592 KLRDVEILCQSPEVEHLPIVKAIQKILYASED 497
           KLR++E++CQ  E E  P+++ I +ILYA+++
Sbjct: 221 KLRNIELICQENEGESDPVLQRIIEILYATDE 252

>YSI1_CAEEL (Q10033) Hypothetical protein F15G9.1|
          Length = 279

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = -1

Query: 565 QSPEVEHLPIVKAIQKILYASEDDPSTLAEAQAEMVAQQNQIQQQ-PMLSPILEASEAPS 389
           Q  EVE + +  A +      E+D   + +AQ E++A   QI++  P+ SP+ E S A S
Sbjct: 128 QQTEVEEVKLTLASEPEESEEEEDDEDVRKAQ-ELLAASTQIRESSPVSSPVKEVSSAAS 186

Query: 388 ITPKESSEES 359
           +   ++  E+
Sbjct: 187 LFANDNGNET 196

>MARE2_XENLA (Q7ZXP1) Microtubule-associated protein RP/EB family member 2|
          Length = 327

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = -1

Query: 592 KLRDVEILCQSPEVEHLPIVKAIQKILYASEDDPSTLAEAQAE 464
           KLR++E+LCQ    E   +++ +  ILY+SE+  S   + + E
Sbjct: 269 KLREIELLCQEHGQEGDDLLQRLMDILYSSEEQESHTEQHEGE 311

>SLIK6_HUMAN (Q9H5Y7) SLIT and NTRK-like protein 6 precursor|
          Length = 841

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
 Frame = -1

Query: 442 IQQQPMLSPILEASEAPSITPKESSEESLRQE---AAAAHKRKSISDLEEFEMGSSSRMR 272
           + +Q M+SP++    +PS  PK   EE  R E   + A H ++S+ + E     + S M+
Sbjct: 677 LYEQHMVSPMVHVYRSPSFGPKHLEEEEERNEKEGSDAKHLQRSLLEQENHSPLTGSNMK 736

>CRF1_YARLI (P45815) Copper resistance protein CRF1|
          Length = 411

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -1

Query: 457 AQQNQIQQQPMLSPILEASEAPSITPKESSEESLRQEAAAAHKRKSIS 314
           AQQ Q Q QP  SPIL+  + P  TP  ++  +    A   H  +++S
Sbjct: 130 AQQQQQQPQPQASPILQQPQMP--TPVHTTNVTTPPVATPTHSHRALS 175

>CT2NL_MOUSE (Q99LJ0) CTTNBP2 N-terminal-like protein|
          Length = 638

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = -1

Query: 496 DPSTLAEAQAEMVAQQNQIQQQPMLSPILEASEAPSITPKESSEESLRQEAAA-AHKRKS 320
           DP    +   E + ++N  ++QP+ +  L   +A     K   E  L Q AAA +  RK 
Sbjct: 52  DPLMALQRDFETLKEKNDSEKQPVCTNPLSVLKAVMKQCKNMQERMLSQLAAAESRHRKV 111

Query: 319 ISDLEE 302
           I DLEE
Sbjct: 112 ILDLEE 117

>ERF2_PICPI (P23637) Eukaryotic peptide chain release factor GTP-binding|
           subunit (ERF2) (Translation release factor 3)
           (Polypeptide release factor 3) (ERF3) (ERF-3)
           (Omnipotent suppressor protein 2)
          Length = 741

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = -1

Query: 475 AQAEMVAQQNQIQQQPMLSPILEASEAPSITPKESSEESLRQEAAAAHKRKSISDLEE 302
           A+AE   ++    + P  +  +  SE P+ TPK  ++ S    AAAA  +K +S  ++
Sbjct: 229 AEAENKVEEESKVEAPTAAKPVSESEFPASTPKTEAKASKEVAAAAAALKKEVSQAKK 286

>CWLO_BACLD (Q65NQ9) Peptidoglycan DL-endopeptidase cwlO precursor (EC 3.4.-.-)|
           (D-gamma-glutamyl-meso-diaminopimelyl DL-endopeptidase)
          Length = 452

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 18/123 (14%)
 Frame = -1

Query: 571 LCQSPEVEHLPIVKAIQKILYASEDDPSTLAEAQAEMVAQQNQIQQQPMLSPILEAS--- 401
           L    E +   + KA+  +    ++   TLA+ +        Q+++Q  LS  L+     
Sbjct: 166 LLDEQEKDKNKLEKAMSDLNTKLDEIQKTLADLKTLKSDLDKQLKEQANLSKQLQTKQAA 225

Query: 400 ----------EAPSITPKESS-EESLRQE----AAAAHKRKSISDLEEFEMGSSSRMRLS 266
                     EA S+T +E++ E+ L++E    AAAA  ++  +  E+ + GSSS     
Sbjct: 226 AESELSDLKKEAGSLTKEEAALEQKLKEERAAAAAAAKAKEESATAEKSDSGSSSSSNSG 285

Query: 265 DVS 257
            VS
Sbjct: 286 SVS 288

>ANGL6_HUMAN (Q8NI99) Angiopoietin-related protein 6 precursor|
           (Angiopoietin-like 6) (Angiopoietin-related growth
           factor) (Angiopoietin-related protein 5)
          Length = 470

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 20/78 (25%), Positives = 32/78 (41%)
 Frame = -1

Query: 541 PIVKAIQKILYASEDDPSTLAEAQAEMVAQQNQIQQQPMLSPILEASEAPSITPKESSEE 362
           P+V  +   L  S  D S + +   E    Q Q QQ+PM SP + A      T      +
Sbjct: 200 PLVPVVPVRLVGSTSDTSRMLDPAPEPQRDQTQRQQEPMASP-MPAGHPAVPTKPVGPWQ 258

Query: 361 SLRQEAAAAHKRKSISDL 308
              +   A H++  + +L
Sbjct: 259 DCAEARQAGHEQSGVYEL 276

>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic|
            cytomatrix protein) (Brain-derived HLMN protein)
          Length = 5038

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
 Frame = -1

Query: 538  IVKAIQKILYASEDDPST-------------LAEAQAE-MVAQQNQIQQQPM-LSPILEA 404
            ++K ++K  ++ E  PS+             + EAQA  +V ++ + + QP  +SP    
Sbjct: 1294 LLKGLKKDSFSQESSPSSPSDLAKLESTVLSILEAQASTLVGEKAEKKTQPQKVSPEQPQ 1353

Query: 403  SEAPSITPKESSEESLRQEAAAAHKRKSISDLEEFEMGSSSR 278
             +  + TP E+ + S+ +E     + K ++  ++   G  SR
Sbjct: 1354 DQQKTQTPSETRDISISEEEIKESQEKKVTSKKDSAQGFPSR 1395

>LEPA_PSEPK (Q88MY7) GTP-binding protein lepA|
          Length = 599

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
 Frame = -1

Query: 583 DVEILCQSPEVEHLPIVKAIQKILYA-----SEDDPSTLAEAQAEMVAQQNQIQQQPMLS 419
           D   L  +PEVE LP  K IQ  +YA     S DD     +A  ++    + +Q  P  S
Sbjct: 275 DTLTLSSTPEVEVLPGFKKIQPQVYAGLFPVSSDDFEDFRDALQKLTLNDSSLQYMPESS 334

Query: 418 PIL 410
             L
Sbjct: 335 DAL 337

>SYFB_PSEPK (Q88K22) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 793

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -1

Query: 538 IVKAIQKILYASEDDPSTLAEAQAEMVAQQNQIQQQPMLSPILEASEAP 392
           +VKA+Q  L   +D    L E+    V Q   +QQQPM++ ++  S  P
Sbjct: 553 LVKALQHNLNRQQDRVR-LFESGLRFVGQLGDLQQQPMIAGVITGSRLP 600

>CCNK_HUMAN (O75909) Cyclin-K|
          Length = 357

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
 Frame = -1

Query: 571 LCQSPEVEHLPIVKAIQKILYASEDDPSTLAEAQAEMVAQQNQIQQQ-----PMLSPILE 407
           L Q P ++  P V  +Q+   +   +PS   +   +  AQQ Q  QQ     P  S   +
Sbjct: 273 LQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQPKKPSPQPSSPRQ 332

Query: 406 ASEAPSITPKESSE 365
              A  ++PKE ++
Sbjct: 333 VKRAVVVSPKEENK 346

>LEPA_PSEF5 (Q4KHT3) GTP-binding protein lepA|
          Length = 599

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
 Frame = -1

Query: 583 DVEILCQSPEVEHLPIVKAIQKILYA-----SEDDPSTLAEAQAEMVAQQNQIQQQPMLS 419
           D   L  +P+VE LP  K IQ  +YA     S DD     EA  ++    + +Q  P  S
Sbjct: 275 DTLTLSSTPDVEVLPGFKRIQPQVYAGLFPVSSDDFEDFREALQKLTLNDSSLQYTPESS 334

Query: 418 PIL 410
             L
Sbjct: 335 DAL 337

>NFH_MOUSE (P19246) Neurofilament triplet H protein (200 kDa neurofilament|
            protein) (Neurofilament heavy polypeptide) (NF-H)
          Length = 1090

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
 Frame = -1

Query: 499  DDPSTLAEAQAEMVAQQNQIQQQPMLSP---ILEASEAPSITPKESSEESLRQEAAAAHK 329
            ++  TL   + E  A++++  + P  +P   + E  E P+  PK+S+ E+ ++E  A  K
Sbjct: 904  EEEKTLPTPKTE--AKESKKDEAPKEAPKPKVEEKKETPTEKPKDSTAEAKKEE--AGEK 959

Query: 328  RKSISDLEE 302
            +K+++  EE
Sbjct: 960  KKAVASEEE 968

>TENS1_HUMAN (Q9HBL0) Tensin-1|
          Length = 1735

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 22/62 (35%), Positives = 30/62 (48%)
 Frame = -1

Query: 433  QPMLSPILEASEAPSITPKESSEESLRQEAAAAHKRKSISDLEEFEMGSSSRMRLSDVSD 254
            QP+LSP  EA+  PS TP+E   E L  E   AH+   +   E+      + +R    SD
Sbjct: 845  QPLLSP-KEATSDPSRTPEE---EPLNLEGLVAHRVAGVQAREKQPAEPPAPLRRRAASD 900

Query: 253  VQ 248
             Q
Sbjct: 901  GQ 902

>K501_ACTCH (P43393) Fruit protein PKIWI501|
          Length = 184

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 15/61 (24%), Positives = 31/61 (50%)
 Frame = -1

Query: 577 EILCQSPEVEHLPIVKAIQKILYASEDDPSTLAEAQAEMVAQQNQIQQQPMLSPILEASE 398
           E + + PE      V+A ++       DP+ +AEA+ E+V +  ++ ++P+     +  E
Sbjct: 42  EPVTEEPEKAAPEAVEAPEEPAATDAKDPAEVAEAEEEVVEEPQEVPEEPVAEAAAKEVE 101

Query: 397 A 395
           A
Sbjct: 102 A 102

>SPESP_HUMAN (Q6UW49) Sperm equatorial segment protein 1 precursor (SP-ESP)|
           (Equatorial segment protein) (ESP) (Glycosylated 38 kDa
           sperm protein C-7/8)
          Length = 350

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 3/122 (2%)
 Frame = -1

Query: 592 KLRDVEILCQSPEVEHLPIVKAIQKILYASEDDPSTLAEAQAEMVAQQNQIQQQPMLSPI 413
           K   +EI  +S +V  L    AI+K     +   S   +   + +   N   QQ +LS  
Sbjct: 186 KSTGIEISTESEDVPQLSGETAIEKPEEFGKHPESWNNDDILKKILDINSQVQQALLSDT 245

Query: 412 LEASEAPSI-TPKESSEESLRQEAAAAHKRKSISDLEEFEMGSSSRMRLSDVSDV--QLC 242
              +    I   K+  + SL   AAA HK K++   +   +G +S  ++ D+  V   LC
Sbjct: 246 SNPAYREDIEASKDHLKRSLALAAAAEHKLKTMYKSQLLPVGRTSN-KIDDIETVINMLC 304

Query: 241 GS 236
            S
Sbjct: 305 NS 306


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,414,206
Number of Sequences: 219361
Number of extensions: 1174600
Number of successful extensions: 4058
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4046
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)