ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6f08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197190.1| Oryza sativa (japonica cultivar-group) putative... 84 6e-13
2gb|BT016964.1| Zea mays clone E04912706C10.c mRNA sequence 84 6e-13
3dbj|AK108732.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 6e-13
4gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 gen... 80 9e-12
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 80 9e-12
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 80 9e-12
7gb|AY104111.1| Zea mays PCO120399 mRNA sequence 78 4e-11
8emb|AL645727.16| Mouse DNA sequence from clone RP23-20G7 on chro... 42 2.0
9gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome 42 2.0
10dbj|AK149643.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 42 2.0
11dbj|AK051873.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 42 2.0
12ref|NM_116508.3| Arabidopsis thaliana unknown protein AT4G02740 ... 40 8.1
13gb|AC004044.1| Arabidopsis thaliana BAC T5J8 from chromosome IV,... 40 8.1
14gb|AY658844.1| Synthetic construct Peudomonas aeruginosa clone F... 40 8.1
15ref|XM_870701.1| PREDICTED: Bos taurus similar to Lactosylcerami... 40 8.1
16gb|AC127338.4| Mus musculus BAC clone RP23-174F20 from 7, comple... 40 8.1
17emb|Z84481.1|HS440O21 Human DNA sequence from clone RP3-440O21 o... 40 8.1
18emb|AL161495.2|ATCHRIV7 Arabidopsis thaliana DNA chromosome 4, c... 40 8.1
19emb|AL662855.19| Mouse DNA sequence from clone RP23-388J21 on ch... 40 8.1
20emb|BX927162.6| Zebrafish DNA sequence from clone CH211-147J13 i... 40 8.1
21gb|AF288789.1| Sus scrofa carnitine palmitoyltransferase I mRNA,... 40 8.1
22gb|AC112657.2| Homo sapiens X BAC RP11-647I17 (Roswell Park Canc... 40 8.1
23ref|NM_214756.1| Danio rerio nicotinamide nucleotide transhydrog... 40 8.1
24emb|BX321919.10| Zebrafish DNA sequence from clone CH211-236B8, ... 40 8.1
25gb|AC132265.4| Mus musculus BAC clone RP24-373J20 from chromosom... 40 8.1
26gb|AC151828.3| Mus musculus BAC clone RP24-444L19 from chromosom... 40 8.1
27gb|AE004704.1| Pseudomonas aeruginosa PAO1, section 265 of 529 o... 40 8.1
28gb|AF284831.1|AF284831 Sus scrofa carnitine palmitoyl transferas... 40 8.1
29dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 8.1
30dbj|AK175207.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 40 8.1
31gb|AC113281.15| Mus musculus chromosome 5, clone RP23-393G8, com... 40 8.1
32gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 8.1
33gb|AC140192.3| Mus musculus BAC clone RP24-377O11 from 6, comple... 40 8.1
34gb|BC066499.1| Danio rerio nicotinamide nucleotide transhydrogen... 40 8.1
35gb|AC144818.4| Mus musculus BAC clone RP23-97O1 from chromosome ... 40 8.1
36emb|AL606982.21| Mouse DNA sequence from clone RP23-354C15 on ch... 40 8.1
37dbj|AP003465.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.1 
>ref|NM_197190.1| Oryza sativa (japonica cultivar-group) putative
           microtubule-associated protein (OSJNBa0078O01.4), mRNA
          Length = 1366

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 102/122 (83%)
 Strand = Plus / Minus

                                                                       
Query: 474 gcctccgccaacgtcgagggatcatcctccgaagcatacagtatcttctggatggccttc 533
           |||||||||| | ||||||| |||||||||| ||| || |||| ||| || || || || 
Sbjct: 893 gcctccgccaccatcgaggggtcatcctccgcagcgtagagtaccttatgaatcgcgttg 834

                                                                       
Query: 534 acaatcggtaagtgctcaacctcagggctctggcacaagatttcgacgtcccgcagcttg 593
           |||||||| || ||||| || |||||||||||||||||||| || || |||| |||||||
Sbjct: 833 acaatcggcaaatgctcgacttcagggctctggcacaagatctccacatccctcagcttg 774

             
Query: 594 ga 595
           ||
Sbjct: 773 ga 772



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 108/131 (82%), Gaps = 6/131 (4%)
 Strand = Plus / Minus

                                                                        
Query: 214  ttcaggtgaagctcatcaacggtgagccgcacagctgcacgtccgagacgtcagagagcc 273
            |||| ||||||||| |||  ||||| ||||||||||||||||| |||| ||| |||||||
Sbjct: 1114 ttcaagtgaagctcgtcagaggtgatccgcacagctgcacgtcggagatgtcggagagcc 1055

                                                                        
Query: 274  tcatcctggagctcgaccccatctcgaactc------ctccaggtccgatatgctcttcc 327
            ||  ||| ||||| ||| ||||  |||||||      ||||||||| || ||||||||||
Sbjct: 1054 tctgcctcgagctggacgccatgccgaactcctccagctccaggtcggagatgctcttcc 995

                       
Query: 328  tcttgtgcgcc 338
            |||||||||||
Sbjct: 994  tcttgtgcgcc 984



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 397 cctcggacgcctccaggatcgggctcagcattggctgct 435
           |||| |||||||||||||| ||||||||||| |||||||
Sbjct: 964 cctccgacgcctccaggattgggctcagcatcggctgct 926
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>gb|BT016964.1| Zea mays clone E04912706C10.c mRNA sequence
          Length = 637

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                       
Query: 243 cacagctgcacgtccgagacgtcagagagcctcatcctggagctcgaccccatctcgaac 302
           ||||||||||||||||||| ||| |||||||||  ||| ||||| |||  |||  | |||
Sbjct: 259 cacagctgcacgtccgagatgtcggagagcctctgccttgagctggacgacataccaaac 318

                                                 
Query: 303 tcctccaggtccgatatgctcttcctcttgtgcgccgc 340
           || ||||||||||| |||||||| ||||||||||||||
Sbjct: 319 tcgtccaggtccgagatgctctttctcttgtgcgccgc 356



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                              
Query: 545 gtgctcaacctcagggctctggcacaagatttcgacgtcccgcagcttgga 595
           |||||||||||||||| | ||||||||||| || | |||||||||||||||
Sbjct: 471 gtgctcaacctcagggttttggcacaagatctcaatgtcccgcagcttgga 521



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 397 cctcggacgcctccaggatcgggctcag 424
           ||||||||||||||| ||| ||||||||
Sbjct: 374 cctcggacgcctccatgatggggctcag 401
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>dbj|AK108732.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-D04, full
           insert sequence
          Length = 1359

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 102/122 (83%)
 Strand = Plus / Minus

                                                                       
Query: 474 gcctccgccaacgtcgagggatcatcctccgaagcatacagtatcttctggatggccttc 533
           |||||||||| | ||||||| |||||||||| ||| || |||| ||| || || || || 
Sbjct: 909 gcctccgccaccatcgaggggtcatcctccgcagcgtagagtaccttatgaatcgcgttg 850

                                                                       
Query: 534 acaatcggtaagtgctcaacctcagggctctggcacaagatttcgacgtcccgcagcttg 593
           |||||||| || ||||| || |||||||||||||||||||| || || |||| |||||||
Sbjct: 849 acaatcggcaaatgctcgacttcagggctctggcacaagatctccacatccctcagcttg 790

             
Query: 594 ga 595
           ||
Sbjct: 789 ga 788



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 105/128 (82%), Gaps = 6/128 (4%)
 Strand = Plus / Minus

                                                                        
Query: 214  ttcaggtgaagctcatcaacggtgagccgcacagctgcacgtccgagacgtcagagagcc 273
            |||| ||||||||| |||  ||||| ||||||||||||||||| |||| ||| |||||||
Sbjct: 1130 ttcaagtgaagctcgtcagaggtgatccgcacagctgcacgtcggagatgtcggagagcc 1071

                                                                        
Query: 274  tcatcctggagctcgaccccatctcgaactcctccaggtcc------gatatgctcttcc 327
            ||  ||| ||||| ||| ||||  ||||||||||||| |||      || ||||||||||
Sbjct: 1070 tctgcctcgagctggacgccatgccgaactcctccagctccaggtcggagatgctcttcc 1011

                    
Query: 328  tcttgtgc 335
            ||||||||
Sbjct: 1010 tcttgtgc 1003



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 397 cctcggacgcctccaggatcgggctcagcattggctgct 435
           |||| |||||||||||||| ||||||||||| |||||||
Sbjct: 980 cctccgacgcctccaggattgggctcagcatcggctgct 942
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>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete
             sequence
          Length = 146664

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 108/131 (82%), Gaps = 6/131 (4%)
 Strand = Plus / Plus

                                                                         
Query: 214   ttcaggtgaagctcatcaacggtgagccgcacagctgcacgtccgagacgtcagagagcc 273
             |||| ||||||||| |||  ||||| ||||||||||||||||| |||| ||| |||||||
Sbjct: 21168 ttcaagtgaagctcgtcagaggtgatccgcacagctgcacgtcggagatgtcggagagcc 21227

                                                                         
Query: 274   tcatcctggagctcgaccccatctcgaactc------ctccaggtccgatatgctcttcc 327
             ||  ||| ||||| ||| ||||  |||||||      ||||||||| || ||||||||||
Sbjct: 21228 tctgcctcgagctggacgccatgccgaactcctccagctccaggtcggagatgctcttcc 21287

                        
Query: 328   tcttgtgcgcc 338
             |||||||||||
Sbjct: 21288 tcttgtgcgcc 21298



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 397   cctcggacgcctccaggatcgggctcagcattggctgct 435
             |||| |||||||||||||| ||||||||||| |||||||
Sbjct: 21318 cctccgacgcctccaggattgggctcagcatcggctgct 21356



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 546   tgctcaacctcagggctctggcacaagatttcgacgtcccgcagcttgga 595
             ||||| || |||||||||||||||||||| || || |||| |||||||||
Sbjct: 21804 tgctcgacttcagggctctggcacaagatctccacatccctcagcttgga 21853
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 108/131 (82%), Gaps = 6/131 (4%)
 Strand = Plus / Plus

                                                                            
Query: 214      ttcaggtgaagctcatcaacggtgagccgcacagctgcacgtccgagacgtcagagagcc 273
                |||| ||||||||| |||  ||||| ||||||||||||||||| |||| ||| |||||||
Sbjct: 18518157 ttcaagtgaagctcgtcagaggtgatccgcacagctgcacgtcggagatgtcggagagcc 18518216

                                                                            
Query: 274      tcatcctggagctcgaccccatctcgaactc------ctccaggtccgatatgctcttcc 327
                ||  ||| ||||| ||| ||||  |||||||      ||||||||| || ||||||||||
Sbjct: 18518217 tctgcctcgagctggacgccatgccgaactcctccagctccaggtcggagatgctcttcc 18518276

                           
Query: 328      tcttgtgcgcc 338
                |||||||||||
Sbjct: 18518277 tcttgtgcgcc 18518287



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 397      cctcggacgcctccaggatcgggctcagcattggctgct 435
                |||| |||||||||||||| ||||||||||| |||||||
Sbjct: 18518307 cctccgacgcctccaggattgggctcagcatcggctgct 18518345



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 546      tgctcaacctcagggctctggcacaagatttcgacgtcccgcagcttgga 595
                ||||| || |||||||||||||||||||| || || |||| |||||||||
Sbjct: 18518793 tgctcgacttcagggctctggcacaagatctccacatccctcagcttgga 18518842
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 108/131 (82%), Gaps = 6/131 (4%)
 Strand = Plus / Plus

                                                                            
Query: 214      ttcaggtgaagctcatcaacggtgagccgcacagctgcacgtccgagacgtcagagagcc 273
                |||| ||||||||| |||  ||||| ||||||||||||||||| |||| ||| |||||||
Sbjct: 18528210 ttcaagtgaagctcgtcagaggtgatccgcacagctgcacgtcggagatgtcggagagcc 18528269

                                                                            
Query: 274      tcatcctggagctcgaccccatctcgaactc------ctccaggtccgatatgctcttcc 327
                ||  ||| ||||| ||| ||||  |||||||      ||||||||| || ||||||||||
Sbjct: 18528270 tctgcctcgagctggacgccatgccgaactcctccagctccaggtcggagatgctcttcc 18528329

                           
Query: 328      tcttgtgcgcc 338
                |||||||||||
Sbjct: 18528330 tcttgtgcgcc 18528340



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 397      cctcggacgcctccaggatcgggctcagcattggctgct 435
                |||| |||||||||||||| ||||||||||| |||||||
Sbjct: 18528360 cctccgacgcctccaggattgggctcagcatcggctgct 18528398



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 546      tgctcaacctcagggctctggcacaagatttcgacgtcccgcagcttgga 595
                ||||| || |||||||||||||||||||| || || |||| |||||||||
Sbjct: 18528846 tgctcgacttcagggctctggcacaagatctccacatccctcagcttgga 18528895
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>gb|AY104111.1| Zea mays PCO120399 mRNA sequence
          Length = 1266

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 105/127 (82%)
 Strand = Plus / Minus

                                                                        
Query: 214  ttcaggtgaagctcatcaacggtgagccgcacagctgcacgtccgagacgtcagagagcc 273
            ||||| |||| ||| ||| ||| || || |||||||||||||| |||| ||| |||||||
Sbjct: 1048 ttcagctgaaactcgtcagcggggatccacacagctgcacgtctgagatgtcggagagcc 989

                                                                        
Query: 274  tcatcctggagctcgaccccatctcgaactcctccaggtccgatatgctcttcctcttgt 333
            ||  ||| ||||| |||  |||  | ||||| ||||||||||| |||||||| |||||||
Sbjct: 988  tctgccttgagctggacgacataccaaactcgtccaggtccgagatgctctttctcttgt 929

                   
Query: 334  gcgccgc 340
            |||||||
Sbjct: 928  gcgccgc 922



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                              
Query: 545 gtgctcaacctcagggctctggcacaagatttcgacgtcccgcagcttgga 595
           |||||||||||||||| | ||||||||||| || | |||||||||||||||
Sbjct: 807 gtgctcaacctcagggttttggcacaagatctcaatgtcccgcagcttgga 757



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 397 cctcggacgcctccaggatcgggctcag 424
           ||||||||||||||| ||| ||||||||
Sbjct: 904 cctcggacgcctccatgatggggctcag 877
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>emb|AL645727.16| Mouse DNA sequence from clone RP23-20G7 on chromosome 1 Contains a
              cytochrome c oxidase subunit Vb (Cox5b) pseudogene, a
              ribosomal protein S2 (Rps2) pseudogene, the 5' end of the
              Nrp2 gene for neuropilin 2, the 3' end of the gene for an
              ortholog of human amyotrophic lateral sclerosis 2
              (juvenile) chromosome region candidate 19 (ALS2CR19) and
              two CpG islands, complete sequence
          Length = 218427

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 336    gccgcagcagcttcctgcctc 356
              |||||||||||||||||||||
Sbjct: 193236 gccgcagcagcttcctgcctc 193256
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>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome
          Length = 230138

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 332   gtgcgccgcagcagcttcctg 352
             |||||||||||||||||||||
Sbjct: 13552 gtgcgccgcagcagcttcctg 13532
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>dbj|AK149643.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530007C21 product:neuropilin 2,
           full insert sequence
          Length = 4179

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 336 gccgcagcagcttcctgcctc 356
           |||||||||||||||||||||
Sbjct: 182 gccgcagcagcttcctgcctc 202
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>dbj|AK051873.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length
           enriched library, clone:D230012O11 product:neuropilin 2,
           full insert sequence
          Length = 2668

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 336 gccgcagcagcttcctgcctc 356
           |||||||||||||||||||||
Sbjct: 141 gccgcagcagcttcctgcctc 161
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>ref|NM_116508.3| Arabidopsis thaliana unknown protein AT4G02740 mRNA, complete cds
          Length = 1628

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 436 gctggatctgattctgctgc 455
           ||||||||||||||||||||
Sbjct: 546 gctggatctgattctgctgc 565
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>gb|AC004044.1| Arabidopsis thaliana BAC T5J8 from chromosome IV, top arm, complete
             sequence
          Length = 98527

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 436   gctggatctgattctgctgc 455
             ||||||||||||||||||||
Sbjct: 17013 gctggatctgattctgctgc 16994
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>gb|AY658844.1| Synthetic construct Peudomonas aeruginosa clone FLH042146.01F
           PA2767 gene, partial cds
          Length = 969

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 332 gtgcgccgcagcagcttcct 351
           ||||||||||||||||||||
Sbjct: 332 gtgcgccgcagcagcttcct 313
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>ref|XM_870701.1| PREDICTED: Bos taurus similar to Lactosylceramide
           4-alpha-galactosyltransferase
           (Alpha-1,4-galactosyltransferase)
           (UDP-galactose:beta-D-galactosyl-beta1-R
           4-alpha-D-galactosyltransferase)
           (Alpha-1,4-N-acetylglucosaminyltransferase)
           (Alpha4Gal-T1) (Globotriaosylceramide ... (LOC618369),
           mRNA
          Length = 1188

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 398 ctcggacgcctccaggatcg 417
           ||||||||||||||||||||
Sbjct: 648 ctcggacgcctccaggatcg 667
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>gb|AC127338.4| Mus musculus BAC clone RP23-174F20 from 7, complete sequence
          Length = 199546

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 506    agcatacagtatcttctgga 525
              ||||||||||||||||||||
Sbjct: 139824 agcatacagtatcttctgga 139805
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>emb|Z84481.1|HS440O21 Human DNA sequence from clone RP3-440O21 on chromosome X, complete
            sequence
          Length = 107677

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   gctattcaataacaatgttg 33
            ||||||||||||||||||||
Sbjct: 8639 gctattcaataacaatgttg 8620
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>emb|AL161495.2|ATCHRIV7 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 7
          Length = 199615

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 436   gctggatctgattctgctgc 455
             ||||||||||||||||||||
Sbjct: 65683 gctggatctgattctgctgc 65664
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>emb|AL662855.19| Mouse DNA sequence from clone RP23-388J21 on chromosome 11, complete
              sequence
          Length = 157088

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 343    cagcttcctgcctcaagctc 362
              ||||||||||||||||||||
Sbjct: 150845 cagcttcctgcctcaagctc 150864
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>emb|BX927162.6| Zebrafish DNA sequence from clone CH211-147J13 in linkage group 18,
             complete sequence
          Length = 90057

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 426   attggctgctgctggatctg 445
             ||||||||||||||||||||
Sbjct: 33552 attggctgctgctggatctg 33533
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>gb|AF288789.1| Sus scrofa carnitine palmitoyltransferase I mRNA, nuclear gene
           encoding mitochondrial protein, complete cds
          Length = 4285

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 559 ggctctggcacaagatttcg 578
           ||||||||||||||||||||
Sbjct: 623 ggctctggcacaagatttcg 642
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>gb|AC112657.2| Homo sapiens X BAC RP11-647I17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 116810

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 340   cagcagcttcctgcctcaag 359
             ||||||||||||||||||||
Sbjct: 21485 cagcagcttcctgcctcaag 21504
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>ref|NM_214756.1| Danio rerio nicotinamide nucleotide transhydrogenase (nnt), mRNA
          Length = 4750

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 426 attggctgctgctggatctg 445
           ||||||||||||||||||||
Sbjct: 788 attggctgctgctggatctg 807
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>emb|BX321919.10| Zebrafish DNA sequence from clone CH211-236B8, complete sequence
          Length = 163495

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 426   attggctgctgctggatctg 445
             ||||||||||||||||||||
Sbjct: 73775 attggctgctgctggatctg 73756
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>gb|AC132265.4| Mus musculus BAC clone RP24-373J20 from chromosome 10, complete sequence
          Length = 178780

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 552    acctcagggctctggcacaa 571
              ||||||||||||||||||||
Sbjct: 156442 acctcagggctctggcacaa 156461
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>gb|AC151828.3| Mus musculus BAC clone RP24-444L19 from chromosome 10, complete
             sequence
          Length = 222344

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 552   acctcagggctctggcacaa 571
             ||||||||||||||||||||
Sbjct: 63017 acctcagggctctggcacaa 63036
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>gb|AE004704.1| Pseudomonas aeruginosa PAO1, section 265 of 529 of the complete
            genome
          Length = 10171

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 332  gtgcgccgcagcagcttcct 351
            ||||||||||||||||||||
Sbjct: 7325 gtgcgccgcagcagcttcct 7306
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>gb|AF284831.1|AF284831 Sus scrofa carnitine palmitoyl transferase I liver isoform (CPT1)
           mRNA, partial cds
          Length = 791

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 559 ggctctggcacaagatttcg 578
           ||||||||||||||||||||
Sbjct: 426 ggctctggcacaagatttcg 445
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 268     agagcctcatcctggagctc 287
               ||||||||||||||||||||
Sbjct: 1154146 agagcctcatcctggagctc 1154127
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>dbj|AK175207.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-63-G01
          Length = 1638

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 436 gctggatctgattctgctgc 455
           ||||||||||||||||||||
Sbjct: 546 gctggatctgattctgctgc 565
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>gb|AC113281.15| Mus musculus chromosome 5, clone RP23-393G8, complete sequence
          Length = 197920

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   ggctcagcattggctgctgc 437
             ||||||||||||||||||||
Sbjct: 37571 ggctcagcattggctgctgc 37590
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 268    agagcctcatcctggagctc 287
              ||||||||||||||||||||
Sbjct: 828098 agagcctcatcctggagctc 828079
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>gb|AC140192.3| Mus musculus BAC clone RP24-377O11 from 6, complete sequence
          Length = 160574

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   gggtccctcctttcaggtga 222
             ||||||||||||||||||||
Sbjct: 82288 gggtccctcctttcaggtga 82307
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>gb|BC066499.1| Danio rerio nicotinamide nucleotide transhydrogenase, mRNA (cDNA
           clone MGC:76979 IMAGE:6525771), complete cds
          Length = 4750

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 426 attggctgctgctggatctg 445
           ||||||||||||||||||||
Sbjct: 788 attggctgctgctggatctg 807
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>gb|AC144818.4| Mus musculus BAC clone RP23-97O1 from chromosome 5, complete sequence
          Length = 213322

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 418  ggctcagcattggctgctgc 437
            ||||||||||||||||||||
Sbjct: 4835 ggctcagcattggctgctgc 4816
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>emb|AL606982.21| Mouse DNA sequence from clone RP23-354C15 on chromosome 4, complete
             sequence
          Length = 209339

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   gggtccctcctttcaggtga 222
             ||||||||||||||||||||
Sbjct: 79736 gggtccctcctttcaggtga 79717
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>dbj|AP003465.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1043D8
          Length = 230879

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 349    cctgcctcaagctctcctct 368
              ||||||||||||||||||||
Sbjct: 125989 cctgcctcaagctctcctct 126008


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,565,951
Number of Sequences: 3902068
Number of extensions: 4565951
Number of successful extensions: 75057
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74869
Number of HSP's gapped (non-prelim): 186
length of query: 595
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 572
effective length of database: 17,143,297,704
effective search space: 9805966286688
effective search space used: 9805966286688
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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