ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6f07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK067718.1| Oryza sativa (japonica cultivar-group) cDNA clon... 295 8e-77
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 270 5e-69
3gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17... 270 5e-69
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 270 5e-69
5gb|BT018590.1| Zea mays clone EL01N0447C10.d mRNA sequence 103 6e-19
6emb|AL139352.16| Human DNA sequence from clone RP11-445H22 on ch... 46 0.13
7gb|M13792.1|HUMADAG Human adenosine deaminase (ADA) gene, comple... 46 0.13
8gb|AY587061.1| Sus scrofa ataxia-telangiectasia mutated protein ... 44 0.51
9dbj|AB185449.1| Lotus japonicus Lj-CDC50 like 1 mRNA for hypothe... 44 0.51
10gb|AY261364.1| African swine fever virus isolate Tengani 62, com... 42 2.0
11emb|AL672003.6| Mouse DNA sequence from clone RP23-285G5 on chro... 42 2.0
12ref|XM_493936.1| Oryza sativa (japonica cultivar-group), Ozsa800... 40 8.0
13gb|AC108872.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.0
14gb|AC117677.9| Mus musculus chromosome 7, clone RP23-421G2, comp... 40 8.0
15gb|AY261366.1| African swine fever virus isolate Warthog, comple... 40 8.0
16gb|AY261365.1| African swine fever virus isolate Warmbaths, comp... 40 8.0
17emb|BX001006.7| Zebrafish DNA sequence from clone DKEY-148M7 in ... 40 8.0
18emb|CR759753.9| Zebrafish DNA sequence from clone DKEY-11G15 in ... 40 8.0
19gb|AC183606.2| Pan troglodytes BAC clone CH251-286M5 from chromo... 40 8.0
20gb|AC164000.2| Mus musculus chromosome 7, clone RP23-157G7, comp... 40 8.0
21emb|BX005456.6| Zebrafish DNA sequence from clone DKEY-192D15 in... 40 8.0
22emb|AL591672.3| Zebrafish DNA sequence from clone BUSM1-167H12 i... 40 8.0
23emb|AL929566.30| Zebrafish DNA sequence from clone CH211-159C13 ... 40 8.0
24gb|AC027667.20| Homo sapiens 12 BAC RP11-972L6 (Roswell Park Can... 40 8.0
25gb|DQ270964.1| Mustela vison clone XI1O20 microsatellite sequence 40 8.0
26gb|AC151673.24| Medicago truncatula clone mth2-2k12, complete se... 40 8.0
27emb|BX649458.8| Zebrafish DNA sequence from clone DKEY-14P20 in ... 40 8.0
28dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
29dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
30dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
31dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
32dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
33gb|AC134504.2| Homo sapiens 3 BAC RP11-316F12 (Roswell Park Canc... 40 8.0
34gb|AY261363.1| African swine fever virus isolate Pretorisuskop/9... 40 8.0
35gb|AY261362.1| African swine fever virus isolate Mkuzi 1979, com... 40 8.0
36dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
37dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
38dbj|AP003299.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
39dbj|AP005928.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
40dbj|AP004802.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
41dbj|AP005587.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
42dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
43emb|AL929053.5| Zebrafish DNA sequence from clone DKEY-21N12 in ... 40 8.0
44dbj|AK101716.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.0
45dbj|AK101715.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.0
46emb|BX927240.11| Zebrafish DNA sequence from clone DKEY-16N13 in... 40 8.0
47emb|CT025669.8| Zebrafish DNA sequence from clone DKEY-256E21 in... 40 8.0
48emb|CR855881.9| Zebrafish DNA sequence from clone DKEY-232G12 in... 40 8.0
49emb|BX901974.11| Zebrafish DNA sequence from clone DKEY-30F3 in ... 40 8.0
50gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.0
51gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.0
52emb|BX005244.12| Mouse DNA sequence from clone RP23-134F14 on ch... 40 8.0
53emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa... 40 8.0
54dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 8.0
55gb|U18466.1|ASU18466 African swine fever virus, complete genome 40 8.0 
>dbj|AK067718.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119K21, full
            insert sequence
          Length = 1416

 Score =  295 bits (149), Expect = 8e-77
 Identities = 254/289 (87%)
 Strand = Plus / Minus

                                                                        
Query: 299  agcttagttattgccgtttttcctgctccaagataggtaagcagcatcaccttgtggcct 358
            ||||||| |||||| ||||  |||  |||| |||||||||   |||||||| ||||||||
Sbjct: 1129 agcttagctattgctgtttggcctattccatgataggtaattggcatcaccgtgtggcct 1070

                                                                        
Query: 359  tgggattttcacatggatcagagcaaagacaatggacaagaaaatgctcgaggaaccagt 418
            |||  ||||||| || ||||||||||||| |||||  ||||||| |||| |||| |||||
Sbjct: 1069 tggatttttcacgtgaatcagagcaaagagaatggttaagaaaaggctcaaggagccagt 1010

                                                                        
Query: 419  gataaggtacgcatatccaaggaagtcattcttgccacctagccaggttgatgttgtaag 478
            |||||| || || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 gataagatatgcgtatccaagaaagtcattcttgccacctagccaggttgatgttgtaag 950

                                                                        
Query: 479  aaccaggcttttctttccaccaaaactgtaggtattgtaattgtttgttatgtgcatggt 538
            ||  ||||||||||| || |||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 949  aattaggcttttcttgccgccaaaactgtaggtattgtaattgtttgctatgtgcatcgt 890

                                                             
Query: 539  aatgatttcgtcagcttgtatatcctcttcaatgacaccatacagcttt 587
            ||||||||| ||||| |||| ||||||||||||||||||||| ||||||
Sbjct: 889  aatgatttcatcagcctgtagatcctcttcaatgacaccatagagcttt 841
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  270 bits (136), Expect = 5e-69
 Identities = 202/224 (90%)
 Strand = Plus / Minus

                                                                            
Query: 364      ttttcacatggatcagagcaaagacaatggacaagaaaatgctcgaggaaccagtgataa 423
                ||||||| || ||||||||||||| |||||  ||||||| |||| |||| ||||||||||
Sbjct: 32297366 ttttcacgtgaatcagagcaaagagaatggttaagaaaaggctcaaggagccagtgataa 32297307

                                                                            
Query: 424      ggtacgcatatccaaggaagtcattcttgccacctagccaggttgatgttgtaagaacca 483
                | || || |||||||| ||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 32297306 gatatgcgtatccaagaaagtcattcttgccacctagccaggttgatgttgtaagaatta 32297247

                                                                            
Query: 484      ggcttttctttccaccaaaactgtaggtattgtaattgtttgttatgtgcatggtaatga 543
                |||||||||| || |||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 32297246 ggcttttcttgccgccaaaactgtaggtattgtaattgtttgctatgtgcatcgtaatga 32297187

                                                            
Query: 544      tttcgtcagcttgtatatcctcttcaatgacaccatacagcttt 587
                |||| ||||| |||| ||||||||||||||||||||| ||||||
Sbjct: 32297186 tttcatcagcctgtagatcctcttcaatgacaccatagagcttt 32297143
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>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence
          Length = 102751

 Score =  270 bits (136), Expect = 5e-69
 Identities = 202/224 (90%)
 Strand = Plus / Minus

                                                                         
Query: 364   ttttcacatggatcagagcaaagacaatggacaagaaaatgctcgaggaaccagtgataa 423
             ||||||| || ||||||||||||| |||||  ||||||| |||| |||| ||||||||||
Sbjct: 31133 ttttcacgtgaatcagagcaaagagaatggttaagaaaaggctcaaggagccagtgataa 31074

                                                                         
Query: 424   ggtacgcatatccaaggaagtcattcttgccacctagccaggttgatgttgtaagaacca 483
             | || || |||||||| ||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 31073 gatatgcgtatccaagaaagtcattcttgccacctagccaggttgatgttgtaagaatta 31014

                                                                         
Query: 484   ggcttttctttccaccaaaactgtaggtattgtaattgtttgttatgtgcatggtaatga 543
             |||||||||| || |||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 31013 ggcttttcttgccgccaaaactgtaggtattgtaattgtttgctatgtgcatcgtaatga 30954

                                                         
Query: 544   tttcgtcagcttgtatatcctcttcaatgacaccatacagcttt 587
             |||| ||||| |||| ||||||||||||||||||||| ||||||
Sbjct: 30953 tttcatcagcctgtagatcctcttcaatgacaccatagagcttt 30910
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  270 bits (136), Expect = 5e-69
 Identities = 202/224 (90%)
 Strand = Plus / Minus

                                                                            
Query: 364      ttttcacatggatcagagcaaagacaatggacaagaaaatgctcgaggaaccagtgataa 423
                ||||||| || ||||||||||||| |||||  ||||||| |||| |||| ||||||||||
Sbjct: 32387876 ttttcacgtgaatcagagcaaagagaatggttaagaaaaggctcaaggagccagtgataa 32387817

                                                                            
Query: 424      ggtacgcatatccaaggaagtcattcttgccacctagccaggttgatgttgtaagaacca 483
                | || || |||||||| ||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 32387816 gatatgcgtatccaagaaagtcattcttgccacctagccaggttgatgttgtaagaatta 32387757

                                                                            
Query: 484      ggcttttctttccaccaaaactgtaggtattgtaattgtttgttatgtgcatggtaatga 543
                |||||||||| || |||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 32387756 ggcttttcttgccgccaaaactgtaggtattgtaattgtttgctatgtgcatcgtaatga 32387697

                                                            
Query: 544      tttcgtcagcttgtatatcctcttcaatgacaccatacagcttt 587
                |||| ||||| |||| ||||||||||||||||||||| ||||||
Sbjct: 32387696 tttcatcagcctgtagatcctcttcaatgacaccatagagcttt 32387653
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>gb|BT018590.1| Zea mays clone EL01N0447C10.d mRNA sequence
          Length = 1584

 Score =  103 bits (52), Expect = 6e-19
 Identities = 181/224 (80%)
 Strand = Plus / Minus

                                                                        
Query: 301  cttagttattgccgtttttcctgctccaagataggtaagcagcatcaccttgtggccttg 360
            ||||| |||||| |||||||||| |||| |||||| ||   |  |||||||| |||||||
Sbjct: 1180 cttagctattgctgtttttcctgttccaggataggcaattggggtcaccttgcggccttg 1121

                                                                        
Query: 361  ggattttcacatggatcagagcaaagacaatggacaagaaaatgctcgaggaaccagtga 420
            ||   |||||||||||||||||||||| ||| || | ||  |||||| | ||||||||||
Sbjct: 1120 ggtacttcacatggatcagagcaaagagaatcgatatgatgatgctcaacgaaccagtga 1061

                                                                        
Query: 421  taaggtacgcatatccaaggaagtcattcttgccacctagccaggttgatgttgtaagaa 480
             ||  || || | |||||||||||| |||||||| ||||||||||  |  || |  || |
Sbjct: 1060 caatataagcgtgtccaaggaagtcgttcttgccgcctagccaggacgcagtcgacagga 1001

                                                        
Query: 481  ccaggcttttctttccaccaaaactgtaggtattgtaattgttt 524
            | | ||| ||||||||||||||| ||||||| ||||||||||||
Sbjct: 1000 ctatgctcttctttccaccaaaagtgtaggtgttgtaattgttt 957
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>emb|AL139352.16| Human DNA sequence from clone RP11-445H22 on chromosome 20 Contains the
             5' end of the ADA gene for adenosine deaminase, a novel
             gene, the 3' end of a novel gene, the WISP2 gene for WNT1
             inducible signaling pathway protein 2 and a CpG island,
             complete sequence
          Length = 107260

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 341   agcatcaccttgtggccttggga 363
             |||||||||||||||||||||||
Sbjct: 18738 agcatcaccttgtggccttggga 18760
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>gb|M13792.1|HUMADAG Human adenosine deaminase (ADA) gene, complete cds
          Length = 36741

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 341  agcatcaccttgtggccttggga 363
            |||||||||||||||||||||||
Sbjct: 6199 agcatcaccttgtggccttggga 6177
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>gb|AY587061.1| Sus scrofa ataxia-telangiectasia mutated protein gene, exons 1 through
             64 and complete cds
          Length = 153745

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 483   aggcttttctttccaccaaaac 504
             ||||||||||||||||||||||
Sbjct: 30187 aggcttttctttccaccaaaac 30208
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>dbj|AB185449.1| Lotus japonicus Lj-CDC50 like 1 mRNA for hypothetical protein,
            complete cds
          Length = 1458

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 435  ccaaggaagtcattcttgccacctagccag 464
            ||||||||||||||||| ||||| ||||||
Sbjct: 1081 ccaaggaagtcattcttcccaccaagccag 1052
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>gb|AY261364.1| African swine fever virus isolate Tengani 62, complete genome
          Length = 185689

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 325    tccaagataggtaagcagcat 345
              |||||||||||||||||||||
Sbjct: 102042 tccaagataggtaagcagcat 102062
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>emb|AL672003.6| Mouse DNA sequence from clone RP23-285G5 on chromosome X, complete
             sequence
          Length = 221912

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 13    tatacacacatatatcagttttata 37
             |||||||| ||||||||||||||||
Sbjct: 77803 tatacacatatatatcagttttata 77779
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>ref|XM_493936.1| Oryza sativa (japonica cultivar-group), Ozsa8001 predicted mRNA
          Length = 1530

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 375 atcagagcaaagacaatgga 394
           ||||||||||||||||||||
Sbjct: 877 atcagagcaaagacaatgga 896
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>gb|AC108872.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0079P23, complete sequence
          Length = 125090

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   atcagagcaaagacaatgga 394
             ||||||||||||||||||||
Sbjct: 52995 atcagagcaaagacaatgga 52976
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>gb|AC117677.9| Mus musculus chromosome 7, clone RP23-421G2, complete sequence
          Length = 249789

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    cctacttttcttcaagggcc 61
             ||||||||||||||||||||
Sbjct: 47696 cctacttttcttcaagggcc 47677
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>gb|AY261366.1| African swine fever virus isolate Warthog, complete genome
          Length = 186528

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 326    ccaagataggtaagcagcat 345
              ||||||||||||||||||||
Sbjct: 103431 ccaagataggtaagcagcat 103450
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>gb|AY261365.1| African swine fever virus isolate Warmbaths, complete genome
          Length = 190773

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 326    ccaagataggtaagcagcat 345
              ||||||||||||||||||||
Sbjct: 106720 ccaagataggtaagcagcat 106739
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>emb|BX001006.7| Zebrafish DNA sequence from clone DKEY-148M7 in linkage group 3, complete
              sequence
          Length = 193997

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 499    caaaactgtaggtattgtaa 518
              ||||||||||||||||||||
Sbjct: 126941 caaaactgtaggtattgtaa 126922
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>emb|CR759753.9| Zebrafish DNA sequence from clone DKEY-11G15 in linkage group 7, complete
              sequence
          Length = 203801

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 395    caagaaaatgctcgaggaac 414
              ||||||||||||||||||||
Sbjct: 144161 caagaaaatgctcgaggaac 144180
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>gb|AC183606.2| Pan troglodytes BAC clone CH251-286M5 from chromosome 12, complete
             sequence
          Length = 171738

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   gtatgtgtgtatgaaacctg 181
             ||||||||||||||||||||
Sbjct: 75214 gtatgtgtgtatgaaacctg 75233
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>gb|AC164000.2| Mus musculus chromosome 7, clone RP23-157G7, complete sequence
          Length = 206022

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     cctacttttcttcaagggcc 61
              ||||||||||||||||||||
Sbjct: 122398 cctacttttcttcaagggcc 122417
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>emb|BX005456.6| Zebrafish DNA sequence from clone DKEY-192D15 in linkage group 20
             Contains the genes for two novel proteins similar to
             vertebrate NIMA (never in mitosis gene a)-related
             expressed kinase family, a novel gene and a CpG island,
             complete sequence
          Length = 105510

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   acctgaagctgctgctacta 196
             ||||||||||||||||||||
Sbjct: 46270 acctgaagctgctgctacta 46251
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>emb|AL591672.3| Zebrafish DNA sequence from clone BUSM1-167H12 in linkage group 14
             Contains a novel gene and two CpG islands, complete
             sequence
          Length = 95773

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 499   caaaactgtaggtattgtaa 518
             ||||||||||||||||||||
Sbjct: 10460 caaaactgtaggtattgtaa 10479
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>emb|AL929566.30| Zebrafish DNA sequence from clone CH211-159C13 in linkage group 8,
             complete sequence
          Length = 137166

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   tgaaacctgaagctgctgct 192
             ||||||||||||||||||||
Sbjct: 49344 tgaaacctgaagctgctgct 49325
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>gb|AC027667.20| Homo sapiens 12 BAC RP11-972L6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 157801

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   gtatgtgtgtatgaaacctg 181
             ||||||||||||||||||||
Sbjct: 80415 gtatgtgtgtatgaaacctg 80434
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>gb|DQ270964.1| Mustela vison clone XI1O20 microsatellite sequence
          Length = 735

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 309 ttgccgtttttcctgctcca 328
           ||||||||||||||||||||
Sbjct: 108 ttgccgtttttcctgctcca 89
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>gb|AC151673.24| Medicago truncatula clone mth2-2k12, complete sequence
          Length = 125859

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 486   cttttctttccaccaaaact 505
             ||||||||||||||||||||
Sbjct: 15524 cttttctttccaccaaaact 15505
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>emb|BX649458.8| Zebrafish DNA sequence from clone DKEY-14P20 in linkage group 2,
             complete sequence
          Length = 147578

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 499   caaaactgtaggtattgtaa 518
             ||||||||||||||||||||
Sbjct: 59630 caaaactgtaggtattgtaa 59611
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      atcagagcaaagacaatgga 394
                ||||||||||||||||||||
Sbjct: 13071881 atcagagcaaagacaatgga 13071900
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 375      atcagagcaaagacaatgga 394
                ||||||||||||||||||||
Sbjct: 25114704 atcagagcaaagacaatgga 25114685
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 343     catcaccttgtggccttggg 362
               ||||||||||||||||||||
Sbjct: 3626327 catcaccttgtggccttggg 3626308
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 343      catcaccttgtggccttggg 362
                ||||||||||||||||||||
Sbjct: 14785984 catcaccttgtggccttggg 14786003



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 375     atcagagcaaagacaatgga 394
               ||||||||||||||||||||
Sbjct: 3519080 atcagagcaaagacaatgga 3519061
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 520      tgtttgttatgtgcatggta 539
                ||||||||||||||||||||
Sbjct: 33685649 tgtttgttatgtgcatggta 33685668
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>gb|AC134504.2| Homo sapiens 3 BAC RP11-316F12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 87167

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 338   agcagcatcaccttgtggcc 357
             ||||||||||||||||||||
Sbjct: 19132 agcagcatcaccttgtggcc 19151
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>gb|AY261363.1| African swine fever virus isolate Pretorisuskop/96/4, complete genome
          Length = 190324

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 326    ccaagataggtaagcagcat 345
              ||||||||||||||||||||
Sbjct: 107677 ccaagataggtaagcagcat 107696
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>gb|AY261362.1| African swine fever virus isolate Mkuzi 1979, complete genome
          Length = 192714

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 326    ccaagataggtaagcagcat 345
              ||||||||||||||||||||
Sbjct: 108561 ccaagataggtaagcagcat 108580
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>dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0675A05
          Length = 131972

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   atcagagcaaagacaatgga 394
             ||||||||||||||||||||
Sbjct: 10917 atcagagcaaagacaatgga 10898
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>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0033B09
          Length = 143545

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 375    atcagagcaaagacaatgga 394
              ||||||||||||||||||||
Sbjct: 135784 atcagagcaaagacaatgga 135765
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>dbj|AP003299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0699H05
          Length = 144850

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 520   tgtttgttatgtgcatggta 539
             ||||||||||||||||||||
Sbjct: 38719 tgtttgttatgtgcatggta 38738
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>dbj|AP005928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBb0031F23
          Length = 128090

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 343  catcaccttgtggccttggg 362
            ||||||||||||||||||||
Sbjct: 1257 catcaccttgtggccttggg 1276
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>dbj|AP004802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0640D01
          Length = 164996

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   catcaccttgtggccttggg 362
             ||||||||||||||||||||
Sbjct: 97068 catcaccttgtggccttggg 97087
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>dbj|AP005587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0499G10
          Length = 158375

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    catcaccttgtggccttggg 362
              ||||||||||||||||||||
Sbjct: 112102 catcaccttgtggccttggg 112083
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>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1695_A02
          Length = 156214

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   catcaccttgtggccttggg 362
             ||||||||||||||||||||
Sbjct: 34588 catcaccttgtggccttggg 34569
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>emb|AL929053.5| Zebrafish DNA sequence from clone DKEY-21N12 in linkage group 20,
             complete sequence
          Length = 142345

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 494   tccaccaaaactgtaggtattgta 517
             ||||||||||||||||| ||||||
Sbjct: 84333 tccaccaaaactgtagggattgta 84356
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>dbj|AK101716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060N24, full
            insert sequence
          Length = 2803

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 520  tgtttgttatgtgcatggta 539
            ||||||||||||||||||||
Sbjct: 1165 tgtttgttatgtgcatggta 1146
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>dbj|AK101715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060N21, full
            insert sequence
          Length = 2803

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 520  tgtttgttatgtgcatggta 539
            ||||||||||||||||||||
Sbjct: 1165 tgtttgttatgtgcatggta 1146
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>emb|BX927240.11| Zebrafish DNA sequence from clone DKEY-16N13 in linkage group 18,
             complete sequence
          Length = 263615

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 13    tatacacacatatatcagttttat 36
             |||| |||||||||||||||||||
Sbjct: 17262 tatatacacatatatcagttttat 17285
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>emb|CT025669.8| Zebrafish DNA sequence from clone DKEY-256E21 in linkage group 4,
             complete sequence
          Length = 111887

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 493   ttccaccaaaactgtaggtattgt 516
             |||||||||||||||||| |||||
Sbjct: 95175 ttccaccaaaactgtagggattgt 95198
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>emb|CR855881.9| Zebrafish DNA sequence from clone DKEY-232G12 in linkage group 10,
             complete sequence
          Length = 132337

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 494   tccaccaaaactgtaggtattgta 517
             ||||||||||||||||| ||||||
Sbjct: 84363 tccaccaaaactgtagggattgta 84386
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>emb|BX901974.11| Zebrafish DNA sequence from clone DKEY-30F3 in linkage group 3,
             complete sequence
          Length = 192650

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 494   tccaccaaaactgtaggtattgta 517
             ||||||||||||||||| ||||||
Sbjct: 53576 tccaccaaaactgtagggattgta 53599
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 375      atcagagcaaagacaatgga 394
                ||||||||||||||||||||
Sbjct: 25425550 atcagagcaaagacaatgga 25425531
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      atcagagcaaagacaatgga 394
                ||||||||||||||||||||
Sbjct: 13026155 atcagagcaaagacaatgga 13026174
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>emb|BX005244.12| Mouse DNA sequence from clone RP23-134F14 on chromosome X, complete
            sequence
          Length = 77526

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 554  ttgtatatcctcttcaatga 573
            ||||||||||||||||||||
Sbjct: 8104 ttgtatatcctcttcaatga 8085
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>emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa0037L20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 178827

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   atcagagcaaagacaatgga 394
             ||||||||||||||||||||
Sbjct: 61084 atcagagcaaagacaatgga 61103
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 562    cctcttcaatgacaccatacagct 585
              ||||||||||||||||| ||||||
Sbjct: 488853 cctcttcaatgacaccagacagct 488830
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>gb|U18466.1|ASU18466 African swine fever virus, complete genome
          Length = 170101

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 326   ccaagataggtaagcagcat 345
             ||||||||||||||||||||
Sbjct: 89961 ccaagataggtaagcagcat 89980


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,764,460
Number of Sequences: 3902068
Number of extensions: 5764460
Number of successful extensions: 137318
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 136876
Number of HSP's gapped (non-prelim): 442
length of query: 587
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 564
effective length of database: 17,143,297,704
effective search space: 9668819905056
effective search space used: 9668819905056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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