>dbj|AK072571.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131M03, full
            insert sequence
          Length = 1705

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 69/83 (83%), Gaps = 3/83 (3%)
 Strand = Plus / Minus

                                                                        
Query: 301  agcatattgagggttattgtggttatgctgtgcttccatctgacagtcctgctctgactg 360
            |||||||||||| || |||  |||||  |||||||||||| |||| ||||||||| ||||
Sbjct: 1378 agcatattgaggattgttggagttatattgtgcttccatcagacaatcctgctctaactg 1319

                                   
Query: 361  tggagattcatcataatcttgaa 383
             ||| |   ||||||||||||||
Sbjct: 1318 cggaaa---atcataatcttgaa 1299

>ref|NM_187598.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1221

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 67/81 (82%), Gaps = 3/81 (3%)
 Strand = Plus / Minus

                                                                        
Query: 303  catattgagggttattgtggttatgctgtgcttccatctgacagtcctgctctgactgtg 362
            |||||||||| || |||  |||||  |||||||||||| |||| ||||||||| |||| |
Sbjct: 1210 catattgaggattgttggagttatattgtgcttccatcagacaatcctgctctaactgcg 1151

                                 
Query: 363  gagattcatcataatcttgaa 383
            || |   ||||||||||||||
Sbjct: 1150 gaaa---atcataatcttgaa 1133

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 67/81 (82%), Gaps = 3/81 (3%)
 Strand = Plus / Minus

                                                                           
Query: 303     catattgagggttattgtggttatgctgtgcttccatctgacagtcctgctctgactgtg 362
               |||||||||| || |||  |||||  |||||||||||| |||| ||||||||| |||| |
Sbjct: 6508458 catattgaggattgttggagttatattgtgcttccatcagacaatcctgctctaactgcg 6508399

                                    
Query: 363     gagattcatcataatcttgaa 383
               || |   ||||||||||||||
Sbjct: 6508398 gaaa---atcataatcttgaa 6508381

>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0081P02, complete sequence
          Length = 162425

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 67/81 (82%), Gaps = 3/81 (3%)
 Strand = Plus / Minus

                                                                         
Query: 303   catattgagggttattgtggttatgctgtgcttccatctgacagtcctgctctgactgtg 362
             |||||||||| || |||  |||||  |||||||||||| |||| ||||||||| |||| |
Sbjct: 51220 catattgaggattgttggagttatattgtgcttccatcagacaatcctgctctaactgcg 51161

                                  
Query: 363   gagattcatcataatcttgaa 383
             || |   ||||||||||||||
Sbjct: 51160 gaaa---atcataatcttgaa 51143

>gb|AY344490.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF8 mRNA,
            complete cds
          Length = 1441

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 67/81 (82%), Gaps = 3/81 (3%)
 Strand = Plus / Minus

                                                                        
Query: 303  catattgagggttattgtggttatgctgtgcttccatctgacagtcctgctctgactgtg 362
            |||||||||| || |||  |||||  |||||||||||| |||| ||||||||| |||| |
Sbjct: 1310 catattgaggattgttggagttatattgtgcttccatcagacaatcctgctctaactgcg 1251

                                 
Query: 363  gagattcatcataatcttgaa 383
            || |   ||||||||||||||
Sbjct: 1250 gaaa---atcataatcttgaa 1233

>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 548     gagattggttctgctgtggccga 570
               |||||||||||||||||||||||
Sbjct: 3362732 gagattggttctgctgtggccga 3362710

>emb|AJ575240.1|OSA575240 Oryza sativa (japonica cultivar-group) partial mRNA for HSP protein
          Length = 248

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 67/81 (82%), Gaps = 3/81 (3%)
 Strand = Plus / Minus

                                                                       
Query: 303 catattgagggttattgtggttatgctgtgcttccatctgacagtcctgctctgactgtg 362
           |||||||||| || |||  |||||  |||||||||||| |||| ||||||||| |||| |
Sbjct: 248 catattgaggattgttggagttatattgtgcttccatcagacaatcctgctctaactgcg 189

                                
Query: 363 gagattcatcataatcttgaa 383
           || |   ||||||||||||||
Sbjct: 188 gaaa---atcataatcttgaa 171

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 67/81 (82%), Gaps = 3/81 (3%)
 Strand = Plus / Minus

                                                                           
Query: 303     catattgagggttattgtggttatgctgtgcttccatctgacagtcctgctctgactgtg 362
               |||||||||| || |||  |||||  |||||||||||| |||| ||||||||| |||| |
Sbjct: 6507671 catattgaggattgttggagttatattgtgcttccatcagacaatcctgctctaactgcg 6507612

                                    
Query: 363     gagattcatcataatcttgaa 383
               || |   ||||||||||||||
Sbjct: 6507611 gaaa---atcataatcttgaa 6507594

>gb|AC060225.12| Homo sapiens 3 BAC RP11-23J16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172464

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 338    atctgacagtcctgctctgact 359
              ||||||||||||||||||||||
Sbjct: 154517 atctgacagtcctgctctgact 154496

>gb|AC006259.1| Arabidopsis thaliana BAC F21J6 from chromosome V, containing KNAT3 and
             mapping near 60.5 cM, complete sequence
          Length = 110680

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 365   gattcatcataatcttgaatagtta 389
             |||||||||||||||||| ||||||
Sbjct: 62622 gattcatcataatcttgattagtta 62646

>emb|BX927077.10| Zebrafish DNA sequence from clone DKEY-119M17 in linkage group 19,
             complete sequence
          Length = 239130

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 296   ctggaagcatattgagggtta 316
             |||||||||||||||||||||
Sbjct: 33626 ctggaagcatattgagggtta 33606

>gb|AC005510.3|AC005510 Homo sapiens chromosome 4 clone B368A9 map 4q25, complete sequence
          Length = 168468

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 435   agtctggtagagcaggcatgt 455
             |||||||||||||||||||||
Sbjct: 61043 agtctggtagagcaggcatgt 61063

>emb|CR407703.23| Zebrafish DNA sequence from clone CH211-141H12 in linkage group 9,
              complete sequence
          Length = 150766

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 329    tgtgcttccatctgacagtcctgct 353
              ||||||||||||||||||| |||||
Sbjct: 137469 tgtgcttccatctgacagtactgct 137445

>gb|BC065077.1| Mus musculus LIM homeobox protein 6, mRNA (cDNA clone MGC:85996
            IMAGE:6816328), complete cds
          Length = 3246

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 44   gacatttacaaagcacaaca 63
            ||||||||||||||||||||
Sbjct: 3172 gacatttacaaagcacaaca 3153

>gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0027P09, complete sequence
          Length = 171861

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    acaaagcacaacagtatata 70
             ||||||||||||||||||||
Sbjct: 58515 acaaagcacaacagtatata 58496

>gb|AC134537.3| Mus musculus BAC clone RP24-388M1 from chromosome 12, complete sequence
          Length = 221662

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   aaaaacaacaaaagaatcat 185
             ||||||||||||||||||||
Sbjct: 72208 aaaaacaacaaaagaatcat 72189

>gb|U80033.3| Caenorhabditis elegans cosmid T23H2, complete sequence
          Length = 22469

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 288  ttgatcacctggaagcatat 307
            ||||||||||||||||||||
Sbjct: 4745 ttgatcacctggaagcatat 4726

>emb|CR955010.2| Medicago truncatula chromosome 5 clone mth2-8n12, COMPLETE SEQUENCE
          Length = 105005

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 198   acagttaatgtctttcaaacattg 221
             |||||||||||| |||||||||||
Sbjct: 47060 acagttaatgtcattcaaacattg 47037

>gb|AC110380.4| Mus musculus BAC clone RP24-194P24 from 14, complete sequence
          Length = 177581

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 169    aacaacaaaagaatcatgta 188
              ||||||||||||||||||||
Sbjct: 129500 aacaacaaaagaatcatgta 129481

>gb|AC159892.2| Mus musculus BAC clone RP23-313P23 from chromosome 9, complete sequence
          Length = 199351

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   aacaacaaaagaatcatgta 188
             ||||||||||||||||||||
Sbjct: 74358 aacaacaaaagaatcatgta 74377

>gb|AC164524.5| Mus musculus  BAC RP23-438F8 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 180937

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 247   agatgccgttttcgctgccaatgg 270
             |||||||||||| |||||||||||
Sbjct: 23387 agatgccgttttagctgccaatgg 23410

>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome
          Length = 2694756

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 375     aatcttgaatagttaaagta 394
               ||||||||||||||||||||
Sbjct: 2003776 aatcttgaatagttaaagta 2003757

>gb|AC092748.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0019N10, from chromosome 10, complete sequence
          Length = 192267

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    acaaagcacaacagtatata 70
             ||||||||||||||||||||
Sbjct: 69525 acaaagcacaacagtatata 69506

>dbj|AK149585.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched
            library, clone:C730046L05 product:LIM homeobox protein 6,
            full insert sequence
          Length = 2384

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 44   gacatttacaaagcacaaca 63
            ||||||||||||||||||||
Sbjct: 2330 gacatttacaaagcacaaca 2311

>dbj|AK140987.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130091M14 product:LIM/homeobox protein
            Lhx6 homolog [Mus musculus], full insert sequence
          Length = 3369

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 44   gacatttacaaagcacaaca 63
            ||||||||||||||||||||
Sbjct: 3325 gacatttacaaagcacaaca 3306

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 51       acaaagcacaacagtatata 70
                ||||||||||||||||||||
Sbjct: 15648834 acaaagcacaacagtatata 15648815

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 51       acaaagcacaacagtatata 70
                ||||||||||||||||||||
Sbjct: 11844794 acaaagcacaacagtatata 11844813

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 47      atttacaaagcacaacagta 66
               ||||||||||||||||||||
Sbjct: 7866050 atttacaaagcacaacagta 7866031

>ref|XM_231175.3| PREDICTED: Rattus norvegicus LIM homeobox protein 6 (predicted)
            (Lhx6_predicted), mRNA
          Length = 3513

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 44   gacatttacaaagcacaaca 63
            ||||||||||||||||||||
Sbjct: 3454 gacatttacaaagcacaaca 3435

>dbj|AP004340.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0523A04
          Length = 149049

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     atttacaaagcacaacagta 66
              ||||||||||||||||||||
Sbjct: 115048 atttacaaagcacaacagta 115029

>gb|AC156288.5| Mus musculus 6 BAC RP24-246G10 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 166923

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 247   agatgccgttttcgctgccaatgg 270
             |||||||||||| |||||||||||
Sbjct: 73227 agatgccgttttagctgccaatgg 73250

>emb|BX323031.7| Zebrafish DNA sequence from clone DKEYP-7B3 in linkage group 18, complete
              sequence
          Length = 164748

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    agttaatgtctttcaaacat 219
              ||||||||||||||||||||
Sbjct: 121883 agttaatgtctttcaaacat 121864

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 51       acaaagcacaacagtatata 70
                ||||||||||||||||||||
Sbjct: 11852134 acaaagcacaacagtatata 11852153

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 51       acaaagcacaacagtatata 70
                ||||||||||||||||||||
Sbjct: 15736211 acaaagcacaacagtatata 15736192

>emb|AL772165.15| Mouse DNA sequence from clone RP23-118G3 on chromosome 7, complete
             sequence
          Length = 135330

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 515   tcgatgtccatgggcatgtt 534
             ||||||||||||||||||||
Sbjct: 75866 tcgatgtccatgggcatgtt 75847

>emb|AL773525.5| Mouse DNA sequence from clone RP23-169L4 on chromosome 2, complete
              sequence
          Length = 188772

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     gacatttacaaagcacaaca 63
              ||||||||||||||||||||
Sbjct: 133132 gacatttacaaagcacaaca 133151

>gb|L19716.1|XELWN5A Xenopus laevis secreted glycoprotein (wnt-5A) mRNA, complete cds
          Length = 1822

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 359 tgtggagattcatcataatc 378
           ||||||||||||||||||||
Sbjct: 923 tgtggagattcatcataatc 904


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,799,680
Number of Sequences: 3902068
Number of extensions: 4799680
Number of successful extensions: 93069
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92829
Number of HSP's gapped (non-prelim): 233
length of query: 602
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 579
effective length of database: 17,143,297,704
effective search space: 9925969370616
effective search space used: 9925969370616
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)