| Clone Name | rbags6f02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CF151_MOUSE (Q9D361) U11/U12 snRNP 48 kDa protein | 32 | 1.6 | 2 | ARS2_MOUSE (Q99MR6) Arsenite-resistance protein 2 | 30 | 6.1 | 3 | MDR49_DROME (Q00449) Multidrug resistance protein homolog 49 (EC... | 30 | 8.0 |
|---|
>CF151_MOUSE (Q9D361) U11/U12 snRNP 48 kDa protein| Length = 337 Score = 32.0 bits (71), Expect = 1.6 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 3/66 (4%) Frame = +1 Query: 157 SSRTLAEPETAGDTRDKNREQEEQSVGDLMNTGS---TEGEGHTRSTRPRSWHTQGTSKK 327 SS E AGD +KN E+ SV + GS E H R+ R RS H + +K Sbjct: 253 SSHWQEEQGRAGDAAEKNEERRSASVDSRQSGGSYLDVESSRHRRA-RSRSPHKRKRNKD 311 Query: 328 RSNRRR 345 +S+ R Sbjct: 312 KSSESR 317
>ARS2_MOUSE (Q99MR6) Arsenite-resistance protein 2| Length = 875 Score = 30.0 bits (66), Expect = 6.1 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Frame = +1 Query: 154 RSSRTLAEPETAGDTRDKNREQEEQSVGDLMN---TGSTEGEGHTRSTRPRSWHTQGTSK 324 R+ L E E + +D+ +E +Q+ D N T +EG+G + + SK Sbjct: 290 RAGPALGEGERKANDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEEAEKEAKKSK 349 Query: 325 KRSNRRRS 348 KR NR++S Sbjct: 350 KR-NRKQS 356
>MDR49_DROME (Q00449) Multidrug resistance protein homolog 49 (EC 3.6.3.44)| (P-glycoprotein 49) Length = 1302 Score = 29.6 bits (65), Expect = 8.0 Identities = 20/65 (30%), Positives = 31/65 (47%) Frame = +1 Query: 151 LRSSRTLAEPETAGDTRDKNREQEEQSVGDLMNTGSTEGEGHTRSTRPRSWHTQGTSKKR 330 L+ S+ L++ ET D ++EE +L +GS+ G STR K+R Sbjct: 657 LQKSQNLSDEETDDD----EEDEEEDEEPELQTSGSSRDSGFRASTR---------RKRR 703 Query: 331 SNRRR 345 S RR+ Sbjct: 704 SQRRK 708 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,269,506 Number of Sequences: 219361 Number of extensions: 973162 Number of successful extensions: 2936 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2800 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2925 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)