| Clone Name | rbags5p21 |
|---|---|
| Clone Library Name | barley_pub |
>emb|BX914220.7| Zebrafish DNA sequence from clone DKEYP-101F3 in linkage group 6, complete sequence Length = 94202 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 199 tttcaataaacacaaactgtta 220 |||||||||||||||||||||| Sbjct: 34983 tttcaataaacacaaactgtta 35004
>gb|AC159655.8| Mus musculus 6 BAC RP24-559F15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 200889 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ctattattgcatttccagaaag 56 |||||||||||||||||||||| Sbjct: 185992 ctattattgcatttccagaaag 185971
>gb|AC155651.4| Mus musculus 6 BAC RP24-111E13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 175599 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ctattattgcatttccagaaag 56 |||||||||||||||||||||| Sbjct: 31236 ctattattgcatttccagaaag 31215
>gb|AC149369.2| Phakopsora pachyrhizi clone JGIAFNA-53G17, complete sequence Length = 36690 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 351 tggtggtgaaggttcttctgtg 372 |||||||||||||||||||||| Sbjct: 14046 tggtggtgaaggttcttctgtg 14067
>gb|AC097230.3| Sus scrofa clone RP44-254G1, complete sequence Length = 162289 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 141 aataaaaaagaacaaagtatga 162 |||||||||||||||||||||| Sbjct: 46256 aataaaaaagaacaaagtatga 46235
>gb|AC124717.3| Mus musculus BAC clone RP24-147K15 from chromosome 18, complete sequence Length = 204165 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 486 cagcacaacaatggcaaaggc 506 ||||||||||||||||||||| Sbjct: 54918 cagcacaacaatggcaaaggc 54898
>gb|DQ481668.1| Takifugu rubripes HoxDa gene cluster, complete sequence Length = 366816 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 cagtaaagcacggcaccaggc 279 ||||||||||||||||||||| Sbjct: 85375 cagtaaagcacggcaccaggc 85395
>emb|AL136233.14| Human DNA sequence from clone RP11-9E13 on chromosome 10 Contains the 5' end of the RUFY2 gene for RUN and FYVE domain containing 2 (FLJ36895, FLJ10063), the DNA2L gene for DNA2 DNA replication helicase 2-like (yeast) (KIAA0083), a ribosomal protein L26 (RPL26) pseudogene, a novel gene and two CpG islands, complete sequence Length = 138733 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 agacacaattaaaacaaaaag 418 ||||||||||||||||||||| Sbjct: 31763 agacacaattaaaacaaaaag 31783
>emb|AL022313.1|HS1119A7 Human DNA sequence from clone RP5-1119A7 on chromosome 22q12.2-12.3, complete sequence Length = 127145 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 aataaaaaagaacaaagtatg 161 ||||||||||||||||||||| Sbjct: 40542 aataaaaaagaacaaagtatg 40522
>emb|BX546452.9| Zebrafish DNA sequence from clone DKEYP-8B11 in linkage group 25, complete sequence Length = 170113 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 tttcaataaacacaaactgtt 219 ||||||||||||||||||||| Sbjct: 164336 tttcaataaacacaaactgtt 164356
>gb|AC119676.2| Homo sapiens chromosome 1 clone RP5-820O16, complete sequence Length = 160573 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gtaataaaaaagaacaaagta 159 ||||||||||||||||||||| Sbjct: 17582 gtaataaaaaagaacaaagta 17602
>gb|AC113949.2| Homo sapiens chromosome 1 clone RP11-563M18, complete sequence Length = 172143 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 tacaaaggagaactataggaa 78 ||||||||||||||||||||| Sbjct: 118178 tacaaaggagaactataggaa 118158
>gb|AF077541.3| Caenorhabditis elegans cosmid Y23H5A, complete sequence Length = 29571 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 gttcctattattgcatttcca 51 ||||||||||||||||||||| Sbjct: 10747 gttcctattattgcatttcca 10727
>gb|AC148019.5| Mus musculus BAC clone RP23-12B6 from chromosome 18, complete sequence Length = 211149 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 cagcacaacaatggcaaaggc 506 ||||||||||||||||||||| Sbjct: 24572 cagcacaacaatggcaaaggc 24592
>emb|AL670309.6| Human DNA sequence from clone RP11-342B7 on chromosome 1, complete sequence Length = 61896 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 tacaaaggagaactataggaa 78 ||||||||||||||||||||| Sbjct: 29342 tacaaaggagaactataggaa 29322
>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold Length = 1623484 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 1219901 gtaataaaaaagaacaaactatga 1219878
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 1285922 gtaataaaaaagaacaaactatga 1285899
>gb|AC102240.12| Mus musculus chromosome 18, clone RP24-122C12, complete sequence Length = 172481 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 agtttcaataaacacaaact 216 |||||||||||||||||||| Sbjct: 51977 agtttcaataaacacaaact 51996
>gb|AC138732.2| Pongo pygmaeus clone CH253-434E18, complete sequence Length = 148504 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 19519 gtaataaaaaagaacaaactatga 19496
>gb|AC149232.2| Pan troglodytes BAC clone CH251-38H5 from 7, complete sequence Length = 184062 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 139 gtaataaaaaagaacaaagtatgagtat 166 |||||||||||||||||| ||| ||||| Sbjct: 143471 gtaataaaaaagaacaaactattagtat 143498
>gb|AC145405.3| Gorilla gorilla gorilla clone CH255-421A19, complete sequence Length = 179099 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 16179 gtaataaaaaagaacaaactatga 16156
>gb|AC093029.4| Homo sapiens chromosome X clone XX-16186 map p11.4, complete sequence Length = 115625 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttctgtgccagggtccagggtgtg 389 |||||||||| ||||||||||||| Sbjct: 70198 ttctgtgccaaggtccagggtgtg 70221
>gb|AC161020.2| Pan troglodytes BAC clone CH251-19C5 from chromosome 7, complete sequence Length = 200756 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 139 gtaataaaaaagaacaaagtatgagtat 166 |||||||||||||||||| ||| ||||| Sbjct: 188993 gtaataaaaaagaacaaactattagtat 189020
>gb|AC131081.7| Mus musculus chromosome 10, clone RP23-438J1, complete sequence Length = 214060 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cacagaagtttcaataaaca 210 |||||||||||||||||||| Sbjct: 35936 cacagaagtttcaataaaca 35955
>gb|AC122403.3| Mus musculus BAC clone RP24-112A10 from chromosome 16, complete sequence Length = 169481 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 tttccagaaagatacaaagg 65 |||||||||||||||||||| Sbjct: 95210 tttccagaaagatacaaagg 95229
>gb|AC087730.2| Pan troglodytes clone RP43-89H17, complete sequence Length = 148293 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 41545 gtaataaaaaagaacaaactatga 41522
>gb|AC087555.3| Papio anubis clone RP41-63I4, complete sequence Length = 157673 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 130835 gtaataaaaaagaacaaactatga 130812
>gb|AC148136.3| Callicebus moloch clone LB5-135M4, complete sequence Length = 121700 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 63027 gtaataaaaaagaacaaactatga 63004
>gb|AC002465.1| Homo sapiens BAC clone CTA-343P13 from 7, complete sequence Length = 155881 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 79103 gtaataaaaaagaacaaactatga 79080
>gb|AC138108.3| Mus musculus BAC clone RP24-497M9 from chromosome 10, complete sequence Length = 135541 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 cacagaagtttcaataaaca 210 |||||||||||||||||||| Sbjct: 83788 cacagaagtttcaataaaca 83769
>emb|CR391921.18| Zebrafish DNA sequence from clone CH211-185O22 in linkage group 19, complete sequence Length = 132783 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ttcaataaacacaaactgtt 219 |||||||||||||||||||| Sbjct: 23011 ttcaataaacacaaactgtt 23030
>gb|AC124522.4| Mus musculus BAC clone RP23-397A19 from chromosome 10, complete sequence Length = 196485 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 aaaagaacaaagtatgagta 165 |||||||||||||||||||| Sbjct: 54257 aaaagaacaaagtatgagta 54276
>gb|AC117232.3| Mus musculus BAC clone RP23-405K2 from chromosome 10, complete sequence Length = 204465 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cacagaagtttcaataaaca 210 |||||||||||||||||||| Sbjct: 180678 cacagaagtttcaataaaca 180697
>gb|AC121612.2| Mus musculus BAC clone RP23-337A17 from 6, complete sequence Length = 209548 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 tgcacagaagtttcaataaa 208 |||||||||||||||||||| Sbjct: 69758 tgcacagaagtttcaataaa 69777
>gb|AC111140.11| Mus musculus chromosome 3, clone RP23-369L16, complete sequence Length = 236182 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gaaggttcttctgtgccagg 377 |||||||||||||||||||| Sbjct: 67187 gaaggttcttctgtgccagg 67168
>gb|AC145828.1| Pan troglodytes BAC clone RP43-7E4 from 7, complete sequence Length = 139712 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 tgttctagacacaattaaaa 411 |||||||||||||||||||| Sbjct: 132581 tgttctagacacaattaaaa 132562
>gb|AC115747.8| Mus musculus chromosome 10, clone RP23-8P5, complete sequence Length = 193706 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 agaagtttcaataaacacaa 213 |||||||||||||||||||| Sbjct: 76357 agaagtttcaataaacacaa 76376
>gb|AC142322.1| Pan troglodytes BAC clone RP43-66C5 from 7, complete sequence Length = 167122 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tgttctagacacaattaaaa 411 |||||||||||||||||||| Sbjct: 111410 tgttctagacacaattaaaa 111429
>emb|AL590702.17| Human DNA sequence from clone RP13-371D18 on chromosome 6 Contains the 5' end of a novel gene (CD001, BM-021, FLJ11240), a nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1) pseudogene, a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene and a CpG island, complete sequence Length = 113587 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 agacacaattaaaacaaaaa 417 |||||||||||||||||||| Sbjct: 62989 agacacaattaaaacaaaaa 62970
>emb|AL513305.10| Human DNA sequence from clone RP11-415H9 on chromosome 1, complete sequence Length = 69529 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 aataaaaaagaacaaagtat 160 |||||||||||||||||||| Sbjct: 44927 aataaaaaagaacaaagtat 44908
>ref|NM_172833.1| Mus musculus mucosa associated lymphoid tissue lymphoma translocation gene 1 (Malt1), mRNA Length = 5009 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 agtttcaataaacacaaact 216 |||||||||||||||||||| Sbjct: 477 agtttcaataaacacaaact 458
>gb|AC183336.3| Colobus guereza clone CH272-275F14, complete sequence Length = 89721 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 38370 gtaataaaaaagaacaaactatga 38347
>gb|AC163619.2| Mus musculus BAC clone RP24-164P4 from chromosome 9, complete sequence Length = 161793 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 acacaattaaaacaaaaagc 419 |||||||||||||||||||| Sbjct: 104041 acacaattaaaacaaaaagc 104022
>gb|AC173914.3| Nomascus leucogenys leucogenys clone CH271-445J13, complete sequence Length = 188657 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 138465 gtaataaaaaagaacaaactatga 138442
>emb|BX323026.5| Mouse DNA sequence from clone RP24-95F14 on chromosome 11 Contains the Ppm1d gene for magnesium-dependent protein phosphatase 1D delta isoform, the 5' end of the Bcas3 gene for breast carcinoma amplified sequence 3 and a CpG island, complete sequence Length = 130030 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 617 ttgaactggagaccttgagt 636 |||||||||||||||||||| Sbjct: 76139 ttgaactggagaccttgagt 76158
>emb|BX649484.12| Zebrafish DNA sequence from clone CH211-197H24 in linkage group 16, complete sequence Length = 196058 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 taataaaaaagaacaaagta 159 |||||||||||||||||||| Sbjct: 181286 taataaaaaagaacaaagta 181305
>emb|BX548041.14| Zebrafish DNA sequence from clone CH211-223G17 in linkage group 12, complete sequence Length = 123626 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 tttcaataaacacaaactgt 218 |||||||||||||||||||| Sbjct: 112216 tttcaataaacacaaactgt 112197
>emb|BX322792.11| Zebrafish DNA sequence from clone CH211-261I17, complete sequence Length = 174226 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 tttcaataaacacaaactgt 218 |||||||||||||||||||| Sbjct: 18492 tttcaataaacacaaactgt 18473
>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome Length = 2225959 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 gtagagctataggtagagctatag 127 |||||| ||||||||||||||||| Sbjct: 905171 gtagaggtataggtagagctatag 905148
>gb|AC182541.1| Ateles geoffroyi clone UC1-374M20, complete sequence Length = 138146 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 39583 gtaataaaaaagaacaaactatga 39560
>gb|AC113412.2| Homo sapiens chromosome 5 clone RP11-509M23, complete sequence Length = 169637 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 tctagacacaattaaaacaa 414 |||||||||||||||||||| Sbjct: 40274 tctagacacaattaaaacaa 40293
>gb|AF436381.1| Glossosoma nigrior 18S small subunit ribosomal RNA gene, partial sequence Length = 538 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 tacggctgtttactttgaac 622 |||||||||||||||||||| Sbjct: 167 tacggctgtttactttgaac 186
>gb|AC103562.6| Homo sapiens BAC clone RP11-608O21 from 4, complete sequence Length = 147301 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 570 ccttccaggtacactgaggc 589 |||||||||||||||||||| Sbjct: 115856 ccttccaggtacactgaggc 115837
>gb|AC099783.2| Homo sapiens chromosome 3 clone RP11-115I24, complete sequence Length = 159870 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tgcacagaagtttcaataaa 208 |||||||||||||||||||| Sbjct: 6113 tgcacagaagtttcaataaa 6094
>dbj|AK164626.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430041L06 product:mucosa associated lymphoid tissue lymphoma translocation gene 1, full insert sequence Length = 1835 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 agtttcaataaacacaaact 216 |||||||||||||||||||| Sbjct: 513 agtttcaataaacacaaact 494
>gb|AC096708.3| Homo sapiens chromosome 18, clone RP11-861L17, complete sequence Length = 179824 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 ttcctattattgcatttccagaaa 55 ||||| |||||||||||||||||| Sbjct: 141627 ttcctcttattgcatttccagaaa 141604
>gb|AC092044.2| Homo sapiens chromosome 3 clone RP11-146E16, complete sequence Length = 73569 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tgcacagaagtttcaataaa 208 |||||||||||||||||||| Sbjct: 6113 tgcacagaagtttcaataaa 6094
>dbj|AK171981.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830027C21 product:mucosa associated lymphoid tissue lymphoma translocation gene 1, full insert sequence Length = 4106 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 agtttcaataaacacaaact 216 |||||||||||||||||||| Sbjct: 464 agtttcaataaacacaaact 445
>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold Length = 1678549 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 1142771 gtaataaaaaagaacaaactatga 1142794 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 1139211 gtaataaaaaagaacaaactatga 1139188
>gb|AC157989.8| Mus musculus chromosome 5, clone RP24-230P10, complete sequence Length = 164538 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aataaaaaagaacaaagtat 160 |||||||||||||||||||| Sbjct: 64565 aataaaaaagaacaaagtat 64584
>gb|AC093150.4| Homo sapiens chromosome 1 clone RP11-34I24, complete sequence Length = 189946 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 agaacaaagtatgagtatga 168 |||||||||||||||||||| Sbjct: 163915 agaacaaagtatgagtatga 163896
>dbj|AK085071.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430033E09 product:similar to mucosa associated lymphoid tissue lymphoma translocation gene 1, full insert sequence Length = 5009 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 agtttcaataaacacaaact 216 |||||||||||||||||||| Sbjct: 477 agtttcaataaacacaaact 458
>dbj|AK045200.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130046C19 product:similar to mucosa associated lymphoid tissue lymphoma translocation gene 1, full insert sequence Length = 4316 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 agtttcaataaacacaaact 216 |||||||||||||||||||| Sbjct: 468 agtttcaataaacacaaact 449
>dbj|AK041919.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630046N12 product:MALT1 homolog [Homo sapiens], full insert sequence Length = 3726 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 agtttcaataaacacaaact 216 |||||||||||||||||||| Sbjct: 482 agtttcaataaacacaaact 463
>gb|AC146885.3| Callithrix jacchus clone CH259-349L5, complete sequence Length = 213940 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 131014 gtaataaaaaagaacaaactatga 130991
>gb|AC112083.7| Rattus norvegicus BAC CH230-288C21 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 191137 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ccagaaagatacaaaggaga 68 |||||||||||||||||||| Sbjct: 162525 ccagaaagatacaaaggaga 162544
>gb|AC021019.5|AC021019 Homo sapiens BAC clone RP11-496J3 from 6, complete sequence Length = 220216 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 agacacaattaaaacaaaaa 417 |||||||||||||||||||| Sbjct: 184835 agacacaattaaaacaaaaa 184816
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 tagagctataggtagagcta 124 |||||||||||||||||||| Sbjct: 1131008 tagagctataggtagagcta 1130989
>gb|AC090959.1|AC090959 Homo sapiens chromosome 3 clone RP11-80D24 map 3p, complete sequence Length = 163954 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gtaataaaaaagaacaaagt 158 |||||||||||||||||||| Sbjct: 81636 gtaataaaaaagaacaaagt 81655
>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold Length = 1787293 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 1132793 gtaataaaaaagaacaaactatga 1132770
>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold Length = 1825024 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 1164318 gtaataaaaaagaacaaactatga 1164341
>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold Length = 1819346 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 1112347 gtaataaaaaagaacaaactatga 1112324
>gb|AC149788.2| Pan troglodytes BAC clone CH251-63L13 from chromosome 7, complete sequence Length = 171501 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 tgttctagacacaattaaaa 411 |||||||||||||||||||| Sbjct: 11579 tgttctagacacaattaaaa 11598
>gb|AC090644.2| Homo sapiens chromosome 3 clone RP11-322M13 map 3p, complete sequence Length = 201414 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gtaataaaaaagaacaaagt 158 |||||||||||||||||||| Sbjct: 157709 gtaataaaaaagaacaaagt 157728
>gb|AC122151.4| Macaca mulatta clone CH250-492A14, complete sequence Length = 170601 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 133558 gtaataaaaaagaacaaactatga 133581 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 129998 gtaataaaaaagaacaaactatga 129975
>gb|AC009178.4|AC009178 Homo sapiens clone RP11-169C22 from 7q31, complete sequence Length = 178097 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 tgttctagacacaattaaaa 411 |||||||||||||||||||| Sbjct: 94083 tgttctagacacaattaaaa 94064
>gb|AC152169.2| Mus musculus BAC clone RP23-79L13 from chromosome 14, complete sequence Length = 236748 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 aactgttagcagcattgtttgctggtct 240 ||||| |||||| ||||||||||||||| Sbjct: 128214 aactggtagcagtattgtttgctggtct 128241
>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1203H11 Length = 156561 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 tagagctataggtagagcta 124 |||||||||||||||||||| Sbjct: 44245 tagagctataggtagagcta 44226
>emb|AL954150.15| Zebrafish DNA sequence from clone CH211-214B16 in linkage group 3, complete sequence Length = 209296 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 tttcaataaacacaaactgt 218 |||||||||||||||||||| Sbjct: 73925 tttcaataaacacaaactgt 73944
>emb|BX321888.21| Zebrafish DNA sequence from clone DKEYP-47D4 in linkage group 20, complete sequence Length = 176463 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 tttcaataaacacaaactgt 218 |||||||||||||||||||| Sbjct: 102679 tttcaataaacacaaactgt 102698
>emb|BX296516.3| Zebrafish DNA sequence from clone DKEY-219E20 in linkage group 20, complete sequence Length = 160555 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 tttcaataaacacaaactgt 218 |||||||||||||||||||| Sbjct: 3114 tttcaataaacacaaactgt 3095
>emb|AL139021.6|CNS01DX3 Human chromosome 14 DNA sequence BAC R-517O13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 176343 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 cacagaagtttcaataaaca 210 |||||||||||||||||||| Sbjct: 135329 cacagaagtttcaataaaca 135310
>emb|AL135752.6|CNS01DVG Human chromosome 14 DNA sequence BAC R-401H9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171754 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cacagaagtttcaataaaca 210 |||||||||||||||||||| Sbjct: 138471 cacagaagtttcaataaaca 138490
>gb|AC107709.12| Mus musculus chromosome 5, clone RP23-60E7, complete sequence Length = 256771 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aataaaaaagaacaaagtat 160 |||||||||||||||||||| Sbjct: 222968 aataaaaaagaacaaagtat 222987
>emb|AL935167.8| Zebrafish DNA sequence from clone CH211-186G6 in linkage group 16, complete sequence Length = 137333 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 tttcaataaacacaaactgt 218 |||||||||||||||||||| Sbjct: 43403 tttcaataaacacaaactgt 43422
>gb|BC110487.1| Mus musculus mucosa associated lymphoid tissue lymphoma translocation gene 1, mRNA (cDNA clone MGC:124469 IMAGE:40048907), complete cds Length = 4029 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 agtttcaataaacacaaact 216 |||||||||||||||||||| Sbjct: 451 agtttcaataaacacaaact 432
>gb|AC139303.3| Cercopithecus aethiops clone CH252-456L3, complete sequence Length = 179499 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 153366 gtaataaaaaagaacaaactatga 153389
>gb|BC110488.1| Mus musculus mucosa associated lymphoid tissue lymphoma translocation gene 1, mRNA (cDNA clone MGC:124470 IMAGE:40048908), complete cds Length = 3995 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 agtttcaataaacacaaact 216 |||||||||||||||||||| Sbjct: 451 agtttcaataaacacaaact 432
>emb|AL954192.3| Zebrafish DNA sequence from clone CH211-215D15, complete sequence Length = 198052 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 tttcaataaacacaaactgt 218 |||||||||||||||||||| Sbjct: 68629 tttcaataaacacaaactgt 68648
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtaataaaaaagaacaaagtatga 162 |||||||||||||||||| ||||| Sbjct: 1273028 gtaataaaaaagaacaaactatga 1273005
>gb|AC135321.2| Homo sapiens chromosome 3 clone RP11-733F11, complete sequence Length = 177164 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 tgcacagaagtttcaataaa 208 |||||||||||||||||||| Sbjct: 102401 tgcacagaagtttcaataaa 102420 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,817,126 Number of Sequences: 3902068 Number of extensions: 5817126 Number of successful extensions: 121652 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 121318 Number of HSP's gapped (non-prelim): 334 length of query: 644 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 621 effective length of database: 17,143,297,704 effective search space: 10645987874184 effective search space used: 10645987874184 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)