ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags5p20 |
|---|---|
| Clone Library Name | barley_pub |
>Y2253_MYCBO (P64956) Hypothetical protein Mb2253c| Length = 364 Score = 99.8 bits (247), Expect = 7e-21 Identities = 56/140 (40%), Positives = 82/140 (58%), Gaps = 1/140 (0%) Frame = -1 Query: 508 MVCVVHFDGASKGNPGKSGAGAVLMTED-GRVISRLREGLGVATNNVAEYRGLILGLKYA 332 M V+ DG S+GNPG +G GAV+ T D V++ ++ +G ATNNVAEYRGLI GL A Sbjct: 1 MKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 Query: 331 IRLGFKRIKVYGDSQLVCYQVKGTWQAKKENMMELCKEVRKLQENFISFEVHHVRREWNS 152 ++LG V DS+LV Q+ G W+ K ++++L + + L F V R N+ Sbjct: 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 Query: 151 EADRQANIAITLASGAVSEE 92 ADR AN A+ A+ + + + Sbjct: 121 YADRLANDAMDAAAQSAAAD 140
>Y2228_MYCTU (P64955) Hypothetical protein Rv2228c/MT2287| Length = 364 Score = 99.8 bits (247), Expect = 7e-21 Identities = 56/140 (40%), Positives = 82/140 (58%), Gaps = 1/140 (0%) Frame = -1 Query: 508 MVCVVHFDGASKGNPGKSGAGAVLMTED-GRVISRLREGLGVATNNVAEYRGLILGLKYA 332 M V+ DG S+GNPG +G GAV+ T D V++ ++ +G ATNNVAEYRGLI GL A Sbjct: 1 MKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDA 60 Query: 331 IRLGFKRIKVYGDSQLVCYQVKGTWQAKKENMMELCKEVRKLQENFISFEVHHVRREWNS 152 ++LG V DS+LV Q+ G W+ K ++++L + + L F V R N+ Sbjct: 61 VKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNT 120 Query: 151 EADRQANIAITLASGAVSEE 92 ADR AN A+ A+ + + + Sbjct: 121 YADRLANDAMDAAAQSAAAD 140
>EBSB_ENTFA (P36921) Cell wall enzyme ebsB| Length = 135 Score = 62.0 bits (149), Expect = 2e-09 Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Frame = -1 Query: 496 VHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAI--RL 323 ++ D A+KGNPG+SG G V +T+ R +L LG+ +N+ AE++ LI LK AI Sbjct: 4 IYVDAATKGNPGESGGGIVYLTDQSR--QQLHVPLGIVSNHEAEFKVLIEALKKAIANED 61 Query: 322 GFKRIKVYGDSQLVCYQVKGTWQAKKENMMELCKEVRKLQENFISFEVHHVRREWNSEAD 143 + + ++ DS++V ++ + AK E E ++L++NF + + N AD Sbjct: 62 NQQTVLLHSDSKIVVQTIEKNY-AKNEKYQPYLAEYQQLEKNFPLLLIEWLPESQNKAAD 120 Query: 142 RQANIAI 122 A A+ Sbjct: 121 MLARQAL 127
>RNHL_BACSU (P54162) 14.7 kDa ribonuclease H-like protein| Length = 132 Score = 53.9 bits (128), Expect = 5e-07 Identities = 39/127 (30%), Positives = 61/127 (48%) Frame = -1 Query: 496 VHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLGF 317 ++ DGAS GNPG SG G + + +G+ S +GV TN AE+ LI G+K G+ Sbjct: 5 IYVDGASAGNPGPSGIG-IFIKHEGKAES-FSIPIGVHTNQEAEFLALIEGMKLCATRGY 62 Query: 316 KRIKVYGDSQLVCYQVKGTWQAKKENMMELCKEVRKLQENFISFEVHHVRREWNSEADRQ 137 + + DS +V + K +E+ +L+ F F + + + N +AD Sbjct: 63 QSVSFRTDSDIV-ERATELEMVKNITFQPFVEEIIRLKAAFPLFFIKWIPGKQNQKADLL 121 Query: 136 ANIAITL 116 A AI L Sbjct: 122 AKEAIRL 128
>RNH_RALSO (Q8XZ91) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 151 Score = 47.0 bits (110), Expect = 6e-05 Identities = 46/147 (31%), Positives = 64/147 (43%), Gaps = 15/147 (10%) Frame = -1 Query: 496 VHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLGF 317 V+ DGA KGNPG G G VL++ G L G V TNN E +I + R Sbjct: 6 VYSDGACKGNPGLGGWGTVLVS--GGHEKELFGGEAVTTNNRMELMAVIEAFRALKRP-- 61 Query: 316 KRIKVYGDSQ---------LVCYQVKGTWQAKKENMMELCKEVRKLQENFISFEVH---- 176 R+KVY DSQ L ++ +G W+ + ++ R L E ++ EV Sbjct: 62 CRVKVYTDSQYVQKGISEWLAGWKARG-WKTADKKPVKNDDLWRTLDELVVTHEVSWHWV 120 Query: 175 --HVRREWNSEADRQANIAITLASGAV 101 H N AD AN + +A A+ Sbjct: 121 KGHAGHPGNERADALANKGVEIARQAI 147
>RNH_HELPY (P56120) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 143 Score = 44.3 bits (103), Expect = 4e-04 Identities = 36/96 (37%), Positives = 44/96 (45%), Gaps = 6/96 (6%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLGFKRI 308 DG+S GNPG G A+L +D + G TNN E R L LK R RI Sbjct: 9 DGSSLGNPGPGGYAAILRYKDKE--KTISGGEEFTTNNRMELRALNEALKILKRP--CRI 64 Query: 307 KVYGDSQLVCYQVK---GTWQAK---KENMMELCKE 218 +Y DSQ VC + WQ K K ++L KE Sbjct: 65 TLYSDSQYVCQAINVWLANWQKKNFSKVKNVDLWKE 100
>RNH_SYNY3 (Q55801) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 160 Score = 43.5 bits (101), Expect = 6e-04 Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 12/137 (8%) Frame = -1 Query: 496 VHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLGF 317 ++ DGA NPG G GAV++ DGR L G + TNN E G I L + Sbjct: 10 LYTDGACSMNPGPGGYGAVILYGDGR-REELSAGYKMTTNNRMEIMGAIAALSHLQEP-- 66 Query: 316 KRIKVYGDSQLVCYQVKGTWQAK------KENMMELCKEVRKLQENFISFEVHHVRREW- 158 ++ +Y DS+ + + W K + N E K + E H V +W Sbjct: 67 SQVLLYTDSRYMVDAMSKGWAKKWKANGWQRNAKEKAKNPDLWETMLTLCEKHQVTFQWV 126 Query: 157 -----NSEADRQANIAI 122 N E +R +A+ Sbjct: 127 KAHAGNKENERCDRLAV 143
>RNH_HELPJ (Q9ZLH3) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 143 Score = 43.1 bits (100), Expect = 8e-04 Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 6/102 (5%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLGFKRI 308 DG+S GNPG G A+L +D + G TNN E R L LK R I Sbjct: 9 DGSSLGNPGPGGYAAILRYKDKE--KTISGGENFTTNNRMELRALNEALKILKRP--CHI 64 Query: 307 KVYGDSQLVCYQVK---GTWQAK---KENMMELCKEVRKLQE 200 +Y DSQ VC + WQ K K ++L KE K+ + Sbjct: 65 TLYSDSQYVCQAINVWLVNWQKKNFAKVKNVDLWKEFVKVSK 106
>RNH_BRAJA (Q89UU3) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 154 Score = 40.4 bits (93), Expect = 0.005 Identities = 43/145 (29%), Positives = 55/145 (37%), Gaps = 14/145 (9%) Frame = -1 Query: 505 VCVVHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIR 326 V ++ DGA GNPG G GA+L D L G TNN E I L+ A++ Sbjct: 6 VVTIYTDGACSGNPGPGGWGAILKFGDKE--KELNGGERHTTNNQMELMAAISALE-ALK 62 Query: 325 LGFKRIKVYGDSQLVCYQVKGTWQAKKENMMELC-----KEVRKLQENFISFEVHHVRRE 161 + +Y DSQ V + G K N K V Q + + H VR Sbjct: 63 KPC-TVDLYTDSQYVRQGITGWIHGWKRNGWRTADKKPVKNVELWQRLDAALKAHQVRWH 121 Query: 160 W---------NSEADRQANIAITLA 113 W N AD+ A I A Sbjct: 122 WVKGHAGHPENERADQLARDGIVKA 146
>RNH_WOLPM (Q73I74) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 145 Score = 39.7 bits (91), Expect = 0.009 Identities = 45/141 (31%), Positives = 59/141 (41%), Gaps = 15/141 (10%) Frame = -1 Query: 499 VVHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLG 320 +++ DGA GNPG G A+++ +D R RE TNN E +I GLK L Sbjct: 7 IIYTDGACSGNPGAGGWAAIILFQDYRKDIYGRE--ENTTNNKMELTAVINGLKV---LK 61 Query: 319 FK-RIKVYGDSQLVCYQVK-----------GTWQAKKENMMELCKE---VRKLQENFISF 185 F I +Y DS V + + T K MEL KE V E + Sbjct: 62 FSCNINLYTDSLYVKHGITEWINKWKMNGWKTSNKKSVKNMELWKELDNVASQHEIDWKW 121 Query: 184 EVHHVRREWNSEADRQANIAI 122 H ++N EAD A AI Sbjct: 122 VKAHSGDKYNEEADSLARKAI 142
>YPEP_BACSU (P54164) Hypothetical protein ypeP| Length = 120 Score = 38.5 bits (88), Expect = 0.020 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 3/92 (3%) Frame = -1 Query: 409 RLREGLGVATNNVAEYRGLILGLKYAIRLGFKR--IKVYGDSQLVCYQVKGTWQAKKENM 236 R + + TNN AEY L ++ LG R I + GDS +V Q+ G+W + Sbjct: 2 RKNKSFRLKTNNEAEYAALYEAIREVRELGASRNSITIKGDSLVVLNQLDGSWPCYDPSH 61 Query: 235 MELCKEVRKLQENF-ISFEVHHVRREWNSEAD 143 E ++ L E+ ++ ++R+ N EAD Sbjct: 62 NEWLDKIEALLESLKLTPTYETIQRKDNQEAD 93
>RNH_SYNEL (Q8DM24) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 159 Score = 38.1 bits (87), Expect = 0.026 Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 12/122 (9%) Frame = -1 Query: 496 VHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLG- 320 ++ DGA +GNPG G G V+ DG V L TNN E + I LK +L Sbjct: 7 IYTDGACEGNPGPGGWGVVIYFTDGSV-HELGGHHPATTNNRMELQAAIEALKAWRQLAP 65 Query: 319 FKRIKVYGDSQLVC---------YQVKGTWQAKKENMM--ELCKEVRKLQENFISFEVHH 173 I +Y DS+ V ++ +G A K+ ++ +L +E+ L + + + HH Sbjct: 66 GSAIALYTDSEYVLRGITEWIHHWKRRGWKTAAKKPVLNQDLWQELDALNDPLVQW--HH 123 Query: 172 VR 167 VR Sbjct: 124 VR 125
>RNH_PSESM (Q87YT0) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 150 Score = 37.7 bits (86), Expect = 0.034 Identities = 46/144 (31%), Positives = 60/144 (41%), Gaps = 17/144 (11%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLGFKRI 308 DGA KGNPG G GA+L+ + V L G TNN E G I GL+ R + Sbjct: 10 DGACKGNPGPGGWGALLVCKG--VEKELWGGEANTTNNRMELTGAIRGLEELKRP--CEV 65 Query: 307 KVYGDSQLVCYQVKG--TWQA--KKENMMELCKEVRKLQE--NFISFEV--HHVRREW-- 158 + DSQ Y +KG W KK KE K + + +V H V+ +W Sbjct: 66 TLVTDSQ---YVMKGITEWMVNWKKRGWKTAAKEPVKNADLWQLLDEQVSRHTVKWQWVR 122 Query: 157 -------NSEADRQANIAITLASG 107 N AD+ AN + G Sbjct: 123 GHIGHPGNERADQLANRGVDEVRG 146
>RNH_IDILO (Q5QZL3) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 157 Score = 37.7 bits (86), Expect = 0.034 Identities = 22/53 (41%), Positives = 29/53 (54%) Frame = -1 Query: 496 VHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLK 338 ++ DG+ GNPG G GAVL E G+ L +G + TNN E I GL+ Sbjct: 9 LYTDGSCLGNPGPGGYGAVL--EYGKHHKELSQGYRLTTNNRMEMLATIAGLR 59
>CSD_METTH (O27442) Probable cysteine desulfurase (EC 2.8.1.7)| Length = 400 Score = 37.4 bits (85), Expect = 0.044 Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 1/111 (0%) Frame = -1 Query: 625 DQAHAFSGLEAKPRSSSYSSPNNLNHTGAFDAQPVSKQYMVCVVHFDGASKGNPGKSGAG 446 D A + +E R+ H G PV ++ C G + P G G Sbjct: 190 DAAQSIGHMEVDVRAIGADFAAFPGHKGTLG--PVGTGFLYCSTDVQGELE--PLMLGGG 245 Query: 445 AVL-MTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLGFKRIKVYG 296 VL ++EDG V+ T N+A + GL + Y R+G +RI+ +G Sbjct: 246 TVLDVSEDGYVLEDFPAKFEAGTLNIAGFIGLGASIDYMNRIGIRRIQKHG 296
>RNH_THETN (Q8RA67) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 153 Score = 37.4 bits (85), Expect = 0.044 Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 17/138 (12%) Frame = -1 Query: 496 VHFDGASKGNPGKSGAGAVLMTED-GRVISRLREGLGVATNNVAEYRGLILGLKYAIRLG 320 ++ DGA GNPG G AVL+ + + IS E TNN E + I GLK A++ Sbjct: 10 IYTDGACSGNPGPGGWAAVLIYKGIKKEISGFEEN---TTNNRMELKAAIEGLK-ALKRP 65 Query: 319 FKRIKVYGDSQLVCYQVKGTWQAK--KENMM----------ELCKEVRKL----QENFIS 188 K + +Y DS + W K K N + +L KE+ ++ Q N+I Sbjct: 66 CK-VNLYSDSSYLINAFNEGWIEKWQKNNWLKSDKTPVENQDLWKELLEVSKPHQINWIK 124 Query: 187 FEVHHVRREWNSEADRQA 134 + H E+N+ DR A Sbjct: 125 VK-GHSDNEYNNLCDRLA 141
>RNH_HAEDU (Q7VM15) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 153 Score = 37.0 bits (84), Expect = 0.058 Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 5/115 (4%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLGFKRI 308 DG+ GNPG G G VL + ++ +G TNN E R +I GL ++ + Sbjct: 9 DGSCLGNPGPGGIGVVLRYNQHQ--KKVSQGYFQTTNNRMELRAVIEGL--SMLKEACNV 64 Query: 307 KVYGDSQLVCYQV-KGTWQAKKENMMELCKEVRKLQENFI----SFEVHHVRREW 158 +Y DSQ + + K ++ KK N + K ++ ++ ++H++ +W Sbjct: 65 TLYSDSQYMKNGITKWIFKWKKSNWKTANGKAVKNKDLWLLLDEKIQIHYIEWKW 119
>RNH_BUCAP (Q08885) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 161 Score = 37.0 bits (84), Expect = 0.058 Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 3/84 (3%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLGFKRI 308 DG+ GNPG G G +L + I L G + TNN E G+I GL+ I Sbjct: 10 DGSCLGNPGSGGYGTILRYKLHEKI--LTSGFFLTTNNRMELMGVICGLESLKESCIVEI 67 Query: 307 KVYGDSQLVCYQVK---GTWQAKK 245 + DSQ V + TW+ KK Sbjct: 68 TI--DSQYVKQGITNWIATWEKKK 89
>RNH1_BACHD (Q9KEI9) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 196 Score = 36.6 bits (83), Expect = 0.075 Identities = 26/74 (35%), Positives = 39/74 (52%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLGFKRI 308 D S+GNPG V T+ G V+ RE + + TNN+ E+ ++ GL+Y ++ R Sbjct: 71 DVGSQGNPGIVEYKGV-DTKTGEVLFE-REPIPIGTNNMGEFLAIVHGLRY-LKERNSRK 127 Query: 307 KVYGDSQLVCYQVK 266 +Y DSQ VK Sbjct: 128 PIYSDSQTAIKWVK 141
>RNH_RICTY (Q68W20) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 152 Score = 36.2 bits (82), Expect = 0.098 Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 9/134 (6%) Frame = -1 Query: 499 VVHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLG 320 V++ DGA GNPG G GA+L D ++ V TNN E + L+ + Sbjct: 6 VIYTDGACSGNPGPGGWGALLKFNDAS--KKIFGYELVTTNNRMEMTAALEALRVLKKSS 63 Query: 319 FKRIKVYGDSQLVCYQV--------KGTWQAKKENMMELCKEVRKLQENFISFEVHHVRR 164 +++Y DS+ + + + K W +N E K V Q+ + H + Sbjct: 64 I--VEIYTDSKYLQHGITVWIHNWMKNNW---CKNNNEPVKNVDLWQKLYSELSKHTIMW 118 Query: 163 EW-NSEADRQANIA 125 W A NIA Sbjct: 119 RWVKGHASNSGNIA 132
>RNH_STRCO (Q9X7R6) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 231 Score = 36.2 bits (82), Expect = 0.098 Identities = 20/45 (44%), Positives = 24/45 (53%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGL 353 DGASKGNPG +G V+ + LG ATNN+AE L Sbjct: 10 DGASKGNPGPAGWAWVVADASENPVRWEAGPLGKATNNIAELTAL 54
>RNH_HAEIN (P43807) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 154 Score = 35.0 bits (79), Expect = 0.22 Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 5/115 (4%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLGFKRI 308 DG+ GNPG G GAVL + L +G TNN E R +I L I Sbjct: 10 DGSCLGNPGAGGIGAVLRYKQHE--KTLSKGYFQTTNNRMELRAVIEALNTLKEPCL--I 65 Query: 307 KVYGDSQLVCYQV-KGTWQAKKENMMELCKEVRKLQENFI----SFEVHHVRREW 158 +Y DSQ + + K + KK N + K Q+ +I S + H + +W Sbjct: 66 TLYSDSQYMKNGITKWIFNWKKNNWKASSGKPVKNQDLWIALDESIQRHKINWQW 120
>RNH_HAEI8 (Q4QP49) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 154 Score = 35.0 bits (79), Expect = 0.22 Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 5/115 (4%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLGFKRI 308 DG+ GNPG G GAVL + L +G TNN E R +I L I Sbjct: 10 DGSCLGNPGAGGIGAVLRYKQHE--KMLSKGYFKTTNNRMELRAVIEALNTLKEPCL--I 65 Query: 307 KVYGDSQLVCYQV-KGTWQAKKENMMELCKEVRKLQENFI----SFEVHHVRREW 158 +Y DSQ + + K + KK N + K Q+ +I S + H + +W Sbjct: 66 TLYSDSQYMKNGITKWIFNWKKNNWKASSGKPVKNQDLWIALDESIQRHKINWQW 120
>RNH_SILPO (Q5LNJ2) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 155 Score = 34.3 bits (77), Expect = 0.37 Identities = 28/78 (35%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLRE---GLGVATNNVAEYRGLILGLKYAIRLGF 317 DGA GNPG G G +L +G + + RE G TNN E I L+ R Sbjct: 9 DGACSGNPGPGGWGVLLRAIEGETVLKERELCGGEAETTNNRMELLAAINALETLERP-- 66 Query: 316 KRIKVYGDSQLVCYQVKG 263 +I V DS V V G Sbjct: 67 SKITVVTDSAYVKNGVTG 84
>RNH_PSEAE (Q9I2S9) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 148 Score = 33.9 bits (76), Expect = 0.49 Identities = 21/53 (39%), Positives = 27/53 (50%) Frame = -1 Query: 499 VVHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGL 341 V++ DGA KGNPG+ G GA+L+ + L G TNN E I L Sbjct: 8 VIYTDGACKGNPGRGGWGALLLYKGAE--RELWGGEPDTTNNRMELMAAIQAL 58
>RNH_XANOR (Q5H426) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 150 Score = 33.9 bits (76), Expect = 0.49 Identities = 22/53 (41%), Positives = 28/53 (52%) Frame = -1 Query: 496 VHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLK 338 VH DG+ GNPG G A L+ +GR L G V+TNN E I+ L+ Sbjct: 6 VHTDGSCLGNPG-PGGWAALLRYNGRE-KELAGGEAVSTNNRMELMAAIMALE 56
>RNH_XANAC (Q8PNH8) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 150 Score = 33.9 bits (76), Expect = 0.49 Identities = 22/53 (41%), Positives = 28/53 (52%) Frame = -1 Query: 496 VHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLK 338 VH DG+ GNPG G A L+ +GR L G V+TNN E I+ L+ Sbjct: 6 VHTDGSCLGNPG-PGGWAALLRYNGRE-KELAGGEAVSTNNRMELMAAIMALE 56
>RNH_CAUCR (Q9A341) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 149 Score = 33.9 bits (76), Expect = 0.49 Identities = 25/72 (34%), Positives = 35/72 (48%) Frame = -1 Query: 496 VHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLGF 317 ++ DGA KGNPG G GA+L D + + G TNN E I L+ R Sbjct: 7 IYTDGACKGNPGPGGWGAILFYGDKK--KEICGGEPGTTNNRMELMAAIQALELLNRPCV 64 Query: 316 KRIKVYGDSQLV 281 ++++ DSQ V Sbjct: 65 --VELHTDSQYV 74
>RNH_NEIG1 (Q5F7K9) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 145 Score = 33.5 bits (75), Expect = 0.64 Identities = 24/53 (45%), Positives = 27/53 (50%) Frame = -1 Query: 496 VHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLK 338 ++ DGA KGNPG G G VLM R L G TNN E +I GLK Sbjct: 7 LYTDGACKGNPGAGGWG-VLMRYGSRE-KELFGGEAQTTNNRMELTAVIEGLK 57
>RNH_PHOLU (Q8GF77) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 156 Score = 32.7 bits (73), Expect = 1.1 Identities = 20/54 (37%), Positives = 25/54 (46%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIR 326 DG+ GNPG G G +L + L EG TNN E I+GL+ R Sbjct: 10 DGSCLGNPGPGGYGVLLRYQQHE--KTLSEGFYRTTNNRMELMAAIIGLETLTR 61
>RNH_PHOLL (Q7N807) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 156 Score = 32.7 bits (73), Expect = 1.1 Identities = 20/54 (37%), Positives = 25/54 (46%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIR 326 DG+ GNPG G G +L + L EG TNN E I+GL+ R Sbjct: 10 DGSCLGNPGPGGYGVLLRYQQHE--KTLSEGFYHTTNNRMELMAAIIGLETLTR 61
>RNH_NEIMB (Q9JYE5) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 145 Score = 32.7 bits (73), Expect = 1.1 Identities = 21/53 (39%), Positives = 26/53 (49%) Frame = -1 Query: 496 VHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLK 338 ++ DGA KGNPG G G ++ G L G TNN E +I GLK Sbjct: 7 LYTDGACKGNPGAGGWGVLM--RYGSHEKELFGGEAQTTNNRMELTAVIEGLK 57
>RNH_NEIMA (Q9JTD9) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 145 Score = 32.7 bits (73), Expect = 1.1 Identities = 21/53 (39%), Positives = 26/53 (49%) Frame = -1 Query: 496 VHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLK 338 ++ DGA KGNPG G G ++ G L G TNN E +I GLK Sbjct: 7 LYTDGACKGNPGAGGWGVLM--RYGSHEKELFGGEAQTTNNRMELTAVIEGLK 57
>RNH_RICCN (Q92GL5) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 152 Score = 32.7 bits (73), Expect = 1.1 Identities = 38/137 (27%), Positives = 54/137 (39%), Gaps = 12/137 (8%) Frame = -1 Query: 499 VVHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGV---ATNNVAEYRGLILGLKYAI 329 V++ DGA GNPG G GA+L D +E G TNN E + L+ I Sbjct: 6 VIYTDGACAGNPGPGGWGALLQFND-----TSKEVFGYELDTTNNRMEITAALEALR--I 58 Query: 328 RLGFKRIKVYGDSQL--------VCYQVKGTWQAKKENMMELCKEVRKLQENFISFEVHH 173 I++Y DS+ + +K W K N E K Q+ + H Sbjct: 59 LKKSCNIEIYTDSKYLQQGITAWIHNWIKNNW-CKSNN--EPVKNADLWQKLYAELSKHT 115 Query: 172 VRREW-NSEADRQANIA 125 + +W A+ NIA Sbjct: 116 IIWKWVKGHANNSGNIA 132
>RNH_VIBPA (Q87MG2) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 154 Score = 32.7 bits (73), Expect = 1.1 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLK 338 DG+ GNPG G G VL +D V L +G + TNN E ++ L+ Sbjct: 10 DGSCLGNPGPGGYGIVLRYKD--VEKTLSKGYTLTTNNRMEMLAAVVALQ 57
>MRC2_RAT (Q4TU93) Macrophage mannose receptor 2 precursor (Endocytic receptor| 180) (CD280 antigen) Length = 1480 Score = 32.3 bits (72), Expect = 1.4 Identities = 14/24 (58%), Positives = 15/24 (62%) Frame = -3 Query: 683 PCALHFPECHWIWSSSRLLRPGAC 612 P L C+WI SSS L RPGAC Sbjct: 1359 PSMLSHNSCYWIQSSSGLWRPGAC 1382
>RNH_PASMU (P57813) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 154 Score = 32.3 bits (72), Expect = 1.4 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 5/115 (4%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLGFKRI 308 DG+ GNPG G G +L + ++ G + TNN E R +I L + Sbjct: 10 DGSCLGNPGPGGIGVLLRYKQHE--KQISAGYFLTTNNRMELRAVIEALNTLKEP--CSV 65 Query: 307 KVYGDSQLVCYQV-KGTWQAKKENMMELCKEVRKLQENFI----SFEVHHVRREW 158 ++ DSQ + + K + KK N + K Q+ +I + + HH+ +W Sbjct: 66 TLHSDSQYMKNGITKWIFNWKKNNWKASTGKPVKNQDLWIQLDQAIQRHHINWQW 120
>RNH_VIBVY (Q7MII6) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 155 Score = 32.3 bits (72), Expect = 1.4 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLK 338 DG+ GNPG G G VL + +V L +G + TNN E I+ L+ Sbjct: 10 DGSCLGNPGPGGYGVVLRYK--QVEKTLAQGYRLTTNNRMEMMATIVALQ 57
>RNH_VIBVU (Q8DBD5) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 155 Score = 32.3 bits (72), Expect = 1.4 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLK 338 DG+ GNPG G G VL + +V L +G + TNN E I+ L+ Sbjct: 10 DGSCLGNPGPGGYGVVLRYK--QVEKTLAQGYRLTTNNRMEMMATIVALQ 57
>MRC2_MOUSE (Q64449) Macrophage mannose receptor 2 precursor (Lectin lambda)| (CD280 antigen) Length = 1479 Score = 32.3 bits (72), Expect = 1.4 Identities = 14/24 (58%), Positives = 15/24 (62%) Frame = -3 Query: 683 PCALHFPECHWIWSSSRLLRPGAC 612 P L C+WI SSS L RPGAC Sbjct: 1359 PSMLSHNSCYWIQSSSGLWRPGAC 1382
>RNH_PSEPK (Q88FF5) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 148 Score = 32.0 bits (71), Expect = 1.9 Identities = 41/136 (30%), Positives = 54/136 (39%), Gaps = 17/136 (12%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLGFKR- 311 DGA KGNPG G G VLM G V L G TNN E I GL + KR Sbjct: 10 DGACKGNPGPGGWG-VLMIYKG-VEKELWGGERETTNNRMELMAAIQGL-----MSLKRE 62 Query: 310 --IKVYGDSQLVCYQV--------KGTWQAKKENMMELCKEVRKLQENFISFEV------ 179 + + DSQ V + K W+ + ++ ++L E +V Sbjct: 63 CEVVLTTDSQYVMKGINEWMVNWKKRGWKTAAKEPVKNADLWQQLDEQVNRHKVTWKWVR 122 Query: 178 HHVRREWNSEADRQAN 131 H+ N AD+ AN Sbjct: 123 GHIGHPGNERADQLAN 138
>RNH_RICPR (Q9ZCK3) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 152 Score = 32.0 bits (71), Expect = 1.9 Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 9/134 (6%) Frame = -1 Query: 499 VVHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLG 320 V++ DGA GNPG G GA+L D ++ V TNN E + L+ + Sbjct: 6 VIYTDGACSGNPGPGGWGALLHFND--TSKKIFGYELVTTNNRMEMTAALEALRILKKSS 63 Query: 319 FKRIKVYGDSQLVCY--------QVKGTWQAKKENMMELCKEVRKLQENFISFEVHHVRR 164 +++Y DS+ + + +K W K N K Q+ + H + Sbjct: 64 V--VEIYTDSKYLQHGITVWIHNWIKNNW-CKSNNAP--VKNADLWQKLYSELSKHTIMW 118 Query: 163 EW-NSEADRQANIA 125 +W A NIA Sbjct: 119 KWVKGHASNSGNIA 132
>RNH_RICFE (Q4UN27) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 152 Score = 32.0 bits (71), Expect = 1.9 Identities = 37/137 (27%), Positives = 54/137 (39%), Gaps = 12/137 (8%) Frame = -1 Query: 499 VVHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGV---ATNNVAEYRGLILGLKYAI 329 V++ DGA GNPG G GA+L D +E G TNN E + L+ I Sbjct: 6 VIYTDGACAGNPGPGGWGALLQFND-----TSKEIFGYELDTTNNRMEITAALEALR--I 58 Query: 328 RLGFKRIKVYGDSQL--------VCYQVKGTWQAKKENMMELCKEVRKLQENFISFEVHH 173 +++Y DS+ + +K W K N E K Q+ + H Sbjct: 59 LKKSCNVEIYTDSKYLQQGITAWIHNWIKNNW-CKSNN--EPVKNADLWQKLYAELSKHT 115 Query: 172 VRREW-NSEADRQANIA 125 + +W A+ NIA Sbjct: 116 IIWKWVKGHANNSGNIA 132
>RNH_WIGBR (Q8D3D3) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 157 Score = 32.0 bits (71), Expect = 1.9 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = -1 Query: 496 VHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLK 338 + DGA GNPG G G ++ + ++ + G + TNN E I+ L+ Sbjct: 7 IFIDGACLGNPGPGGYGVIICGK--KLYKEISNGYYLTTNNRMEIMAAIIALE 57
>RNH_MYCSM (Q07705) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 159 Score = 31.6 bits (70), Expect = 2.4 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 4/77 (5%) Frame = -1 Query: 499 VVHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLG----VATNNVAEYRGLILGLKYA 332 ++H DG + NPG G GAVL R +RE G V +NN E I+ L+ Sbjct: 7 IIHTDGGCRPNPGPGGWGAVL-----RHREHVREMFGGEAAVTSNNRMELTAPIMALEAL 61 Query: 331 IRLGFKRIKVYGDSQLV 281 R + +Y DS V Sbjct: 62 TRP--VTVHLYTDSTYV 76
>ACCA_CHLTE (Q8KG09) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 334 Score = 31.2 bits (69), Expect = 3.2 Identities = 21/67 (31%), Positives = 31/67 (46%) Frame = -1 Query: 625 DQAHAFSGLEAKPRSSSYSSPNNLNHTGAFDAQPVSKQYMVCVVHFDGASKGNPGKSGAG 446 D AF G+EA+ R + + NL A K ++CV+ +GAS G G Sbjct: 174 DTPGAFPGIEAEERGQAEAIARNLYEMAAL------KVPVICVIIGEGASGGAIGIGVGD 227 Query: 445 AVLMTED 425 +LM E+ Sbjct: 228 RILMAEN 234
>RNH_XANCP (Q8PBX8) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 150 Score = 31.2 bits (69), Expect = 3.2 Identities = 21/53 (39%), Positives = 27/53 (50%) Frame = -1 Query: 496 VHFDGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLK 338 VH DG+ GNPG G A L+ +GR L G +TNN E I+ L+ Sbjct: 6 VHTDGSCLGNPG-PGGWAALLRYNGRE-KELAGGEANSTNNRMELMAAIMALE 56
>RNH_BRUSU (P66674) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 154 Score = 31.2 bits (69), Expect = 3.2 Identities = 27/83 (32%), Positives = 36/83 (43%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLGFKRI 308 DGA GNPG G GA+L L+ G TNN E I L A++ + + Sbjct: 9 DGACSGNPGPGGWGALLRWNGNE--KELKGGEAETTNNRMELMAAISALS-ALKEPCE-V 64 Query: 307 KVYGDSQLVCYQVKGTWQAKKEN 239 +Y DS V + G + K N Sbjct: 65 DLYTDSVYVRDGISGWIEGWKRN 87
>RNH_BRUME (P66673) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 154 Score = 31.2 bits (69), Expect = 3.2 Identities = 27/83 (32%), Positives = 36/83 (43%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLGFKRI 308 DGA GNPG G GA+L L+ G TNN E I L A++ + + Sbjct: 9 DGACSGNPGPGGWGALLRWNGNE--KELKGGEAETTNNRMELMAAISALS-ALKEPCE-V 64 Query: 307 KVYGDSQLVCYQVKGTWQAKKEN 239 +Y DS V + G + K N Sbjct: 65 DLYTDSVYVRDGISGWIEGWKRN 87
>RNH_BRUAB (Q57EP4) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 154 Score = 31.2 bits (69), Expect = 3.2 Identities = 27/83 (32%), Positives = 36/83 (43%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRLGFKRI 308 DGA GNPG G GA+L L+ G TNN E I L A++ + + Sbjct: 9 DGACSGNPGPGGWGALLRWNGNE--KELKGGEAETTNNRMELMAAISALS-ALKEPCE-V 64 Query: 307 KVYGDSQLVCYQVKGTWQAKKEN 239 +Y DS V + G + K N Sbjct: 65 DLYTDSVYVRDGISGWIEGWKRN 87
>RNH_RHIME (Q92RG0) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 153 Score = 31.2 bits (69), Expect = 3.2 Identities = 21/49 (42%), Positives = 22/49 (44%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGL 341 DGA GNPG G GAVL G V + G TNN E I L Sbjct: 9 DGACSGNPGPGGWGAVL--RYGDVEKEMSGGEAETTNNRMELLAAISAL 55
>MRC2_HUMAN (Q9UBG0) Macrophage mannose receptor 2 precursor (Urokinase| receptor-associated protein) (Endocytic receptor 180) (CD280 antigen) Length = 1479 Score = 31.2 bits (69), Expect = 3.2 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -3 Query: 683 PCALHFPECHWIWSSSRLLRPGAC 612 P L C+WI S+S L RPGAC Sbjct: 1361 PSMLSHNSCYWIQSNSGLWRPGAC 1384
>RNH_AGRT5 (Q8UHA7) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 146 Score = 30.8 bits (68), Expect = 4.1 Identities = 21/49 (42%), Positives = 21/49 (42%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGL 341 DGA GNPG G GAVL G L G TNN E I L Sbjct: 9 DGACSGNPGPGGWGAVL--RYGETEKELSGGEADTTNNRMELLAAISAL 55
>TENS1_HUMAN (Q9HBL0) Tensin-1| Length = 1735 Score = 30.8 bits (68), Expect = 4.1 Identities = 20/80 (25%), Positives = 34/80 (42%) Frame = -1 Query: 625 DQAHAFSGLEAKPRSSSYSSPNNLNHTGAFDAQPVSKQYMVCVVHFDGASKGNPGKSGAG 446 D H +G R + ++PN++ HT + + + D + PG S A Sbjct: 373 DSLHGSTGAVNATRPTLSATPNHVEHTLSVSSDSGNS---TASTKTDKTDEPVPGASSAT 429 Query: 445 AVLMTEDGRVISRLREGLGV 386 A L ++ R + RL G G+ Sbjct: 430 AALSPQEKRELDRLLSGFGL 449
>RNH_SALTY (P0A2B9) Ribonuclease HI (EC 3.1.26.4) (RNase HI) (Ribonuclease H)| (RNase H) Length = 155 Score = 30.8 bits (68), Expect = 4.1 Identities = 18/50 (36%), Positives = 23/50 (46%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLK 338 DG+ GNPG G GA+L EG + TNN E I+ L+ Sbjct: 10 DGSCLGNPGPGGYGAILRYRGHE--KTFSEGYTLTTNNRMELMAAIVALE 57
>RNH_SALTI (P0A2C0) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 155 Score = 30.8 bits (68), Expect = 4.1 Identities = 18/50 (36%), Positives = 23/50 (46%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLK 338 DG+ GNPG G GA+L EG + TNN E I+ L+ Sbjct: 10 DGSCLGNPGPGGYGAILRYRGHE--KTFSEGYTLTTNNRMELMAAIVALE 57
>RNH_SALPA (Q5PFD8) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 155 Score = 30.8 bits (68), Expect = 4.1 Identities = 18/50 (36%), Positives = 23/50 (46%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLK 338 DG+ GNPG G GA+L EG + TNN E I+ L+ Sbjct: 10 DGSCLGNPGPGGYGAILRYRGHE--KTFSEGYTLTTNNRMELMAAIVALE 57
>HIS6_CAMJR (Q5HSI8) Imidazole glycerol phosphate synthase subunit hisF (EC| 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit hisF) Length = 255 Score = 30.8 bits (68), Expect = 4.1 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 10/70 (14%) Frame = -1 Query: 271 VKGTWQAKKENMMELCKEVRKLQENFI----------SFEVHHVRREWNSEADRQANIAI 122 VKGT ++M ++ + R +N I S + REW SE + NI+ Sbjct: 18 VKGTQFKNHKDMGDIIELARYYSQNGIDELVFYDIAASARKERISREWVSEVAKNINISF 77 Query: 121 TLASGAVSEE 92 +A G SEE Sbjct: 78 CVAGGIKSEE 87
>HIS61_CAMJE (Q9PM72) Imidazole glycerol phosphate synthase subunit hisF1 (EC| 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit hisF1) (ImGP synthase subunit hisF1) (IGPS subunit hisF1) Length = 255 Score = 30.8 bits (68), Expect = 4.1 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 10/70 (14%) Frame = -1 Query: 271 VKGTWQAKKENMMELCKEVRKLQENFI----------SFEVHHVRREWNSEADRQANIAI 122 VKGT ++M ++ + R +N I S + REW SE + NI+ Sbjct: 18 VKGTQFKNHKDMGDIIELARYYSQNGIDELVFYDIAASARKERISREWVSEVAKNINISF 77 Query: 121 TLASGAVSEE 92 +A G SEE Sbjct: 78 CVAGGIKSEE 87
>MSX2_CANFA (Q9GK08) Homeobox protein MSX-2 (Hox-8)| Length = 267 Score = 30.4 bits (67), Expect = 5.4 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 7/42 (16%) Frame = +3 Query: 384 ATPRPSRS-------RDITLPSSVISTAPAPDFPGFPFEAPS 488 A+PRP+ S R + LP AP+P PG PFEA S Sbjct: 62 ASPRPADSASAGAALRPLLLPGHGAREAPSPGPPGKPFEAAS 103
>RNH_ERWCT (Q6D1V7) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 154 Score = 30.4 bits (67), Expect = 5.4 Identities = 19/50 (38%), Positives = 23/50 (46%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLK 338 DG+ GNPG G GAVL + L G + TNN E I L+ Sbjct: 10 DGSCLGNPGPGGYGAVLRYKQHE--KALSAGYRLTTNNRMELMAAIAALE 57
>SOX8_MOUSE (Q04886) Transcription factor SOX-8| Length = 464 Score = 30.4 bits (67), Expect = 5.4 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%) Frame = -1 Query: 679 VPCTFQSATGSGQAQGYSDQAHAFSGLEAKPRSSSYSSPN-NLNHTGAFDAQPVSKQYMV 503 +P AT SG G S +G+ A P + +P+ + + T A +P K + Sbjct: 296 LPTEPSQATASGSYGGASYSHSGATGIGASPVWAHKGAPSASASPTEAGPLRPQIKTEQL 355 Query: 502 CVVHFDGASKGNPGKSGAGA 443 H++ S G+PG++ G+ Sbjct: 356 SPSHYNDQSHGSPGRADYGS 375
>MPPA_NEUCR (P23955) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 577 Score = 30.4 bits (67), Expect = 5.4 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Frame = -2 Query: 675 PALSRVPLDLVKLKVTQTRRMHLAGW---KPNQGPPVIPHQITLTTLELLMHNLS-QNNI 508 P L+RVP+ L TR H G P+Q PP+ P+ T T ++L L+ ++ Sbjct: 317 PFLTRVPISTEDL----TRPAHYTGGFLTLPSQPPPLNPNLPTFTHIQLAFEGLAISDDD 372 Query: 507 WYVLFTLMVL 478 Y L TL L Sbjct: 373 IYALATLQTL 382
>RNH_ZYMMO (O69014) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 156 Score = 30.0 bits (66), Expect = 7.1 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = -1 Query: 520 SKQYMVCVVHFDGASKGNPGKSGAGAVL 437 S Q + ++ DGA KGNPG G GA+L Sbjct: 5 STQDKIVMIATDGACKGNPGFGGWGALL 32
>RNH_VIBCH (Q9KPX8) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 156 Score = 30.0 bits (66), Expect = 7.1 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLK 338 DG+ GNPG G G V+ + +V L G + TNN E ++ L+ Sbjct: 10 DGSCLGNPGPGGYGIVMRYK--QVEKTLARGYRLTTNNRMEMLAAVMALQ 57
>RNH_THET8 (P29253) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 166 Score = 30.0 bits (66), Expect = 7.1 Identities = 20/50 (40%), Positives = 23/50 (46%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLK 338 DGA GNPG G A+L + L G TNN E + I GLK Sbjct: 14 DGACLGNPGPGGWAALLRFHAHEKL--LSGGEACTTNNRMELKAAIEGLK 61
>RNH_THET2 (Q72IE1) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 166 Score = 30.0 bits (66), Expect = 7.1 Identities = 20/50 (40%), Positives = 23/50 (46%) Frame = -1 Query: 487 DGASKGNPGKSGAGAVLMTEDGRVISRLREGLGVATNNVAEYRGLILGLK 338 DGA GNPG G A+L + L G TNN E + I GLK Sbjct: 14 DGACLGNPGPGGWAALLRFNAHEKL--LSGGEACTTNNRMELKAAIEGLK 61
>TENS1_BOVIN (Q9GLM4) Tensin-1| Length = 1715 Score = 30.0 bits (66), Expect = 7.1 Identities = 20/80 (25%), Positives = 33/80 (41%) Frame = -1 Query: 625 DQAHAFSGLEAKPRSSSYSSPNNLNHTGAFDAQPVSKQYMVCVVHFDGASKGNPGKSGAG 446 D H +G R ++PN++ HT + + + D + PG + A Sbjct: 373 DSLHGSNGAVNATRPVLSATPNHVEHTLSVSSDSGNS---TASTKTDKTDEPAPGPASAP 429 Query: 445 AVLMTEDGRVISRLREGLGV 386 A L E+ R + RL G G+ Sbjct: 430 AALSPEEKRELDRLLSGFGL 449
>A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1| Length = 397 Score = 29.6 bits (65), Expect = 9.2 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +3 Query: 315 LNPSLMAYFRPKIRPRYSATLLVATPRPSRSRDITLPSSVISTAPAPDFP 464 LNP + A + P+ Y+ T+L+ S + PSS++ T+ P FP Sbjct: 211 LNPVVGAVYSPEF---YAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFP 257 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,894,074 Number of Sequences: 219361 Number of extensions: 2149029 Number of successful extensions: 6355 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 6081 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6341 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
