ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags5p18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PEAM2_ARATH (Q944H0) Putative phosphoethanolamine N-methyltransf... 75 4e-14
2PEAM3_ARATH (Q9C6B9) Putative phosphoethanolamine N-methyltransf... 72 4e-13
3PEAM1_ARATH (Q9FR44) Phosphoethanolamine N-methyltransferase 1 (... 70 9e-13
4PEAMT_SPIOL (Q9M571) Phosphoethanolamine N-methyltransferase (EC... 66 2e-11
5M3K13_PONPY (Q5R8X7) Mitogen-activated protein kinase kinase kin... 31 0.62
6M3K13_HUMAN (O43283) Mitogen-activated protein kinase kinase kin... 30 1.1
7TF65_CHICK (P98152) Transcription factor p65 (Nuclear factor NF-... 30 1.4
8R1_SOLTU (Q9AWA5) Alpha-glucan water dikinase, chloroplast precu... 28 6.9
9Y1067_METMP (Q6LYC4) Putative iron-sulfur protein MMP1067 28 6.9
10BLI1_CAEEL (Q09457) Cuticle collagen bli-1 (Blistered cuticle pr... 27 9.0

>PEAM2_ARATH (Q944H0) Putative phosphoethanolamine N-methyltransferase 2 (EC|
           2.1.1.103)
          Length = 475

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 32/46 (69%), Positives = 41/46 (89%)
 Frame = -1

Query: 398 ETEKNKEAFLADFSQEDYDDIVNGWSAKLKRSSAGEQKWGLFIATK 261
           + EK KE F++DFS+EDY+DIV GWSAKL+R+++GEQKWGLFIA K
Sbjct: 429 KVEKEKEEFISDFSEEDYNDIVGGWSAKLERTASGEQKWGLFIADK 474



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>PEAM3_ARATH (Q9C6B9) Putative phosphoethanolamine N-methyltransferase 3 (EC|
           2.1.1.103)
          Length = 490

 Score = 71.6 bits (174), Expect = 4e-13
 Identities = 30/44 (68%), Positives = 38/44 (86%)
 Frame = -1

Query: 392 EKNKEAFLADFSQEDYDDIVNGWSAKLKRSSAGEQKWGLFIATK 261
           EK KE F++DFS+EDY+DI+ GW +KL RSS+GEQKWGLFIA +
Sbjct: 446 EKEKEEFISDFSKEDYEDIIGGWKSKLLRSSSGEQKWGLFIAKR 489



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>PEAM1_ARATH (Q9FR44) Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103)|
           (PEAMT 1) (AtNMT1)
          Length = 491

 Score = 70.5 bits (171), Expect = 9e-13
 Identities = 30/44 (68%), Positives = 37/44 (84%)
 Frame = -1

Query: 392 EKNKEAFLADFSQEDYDDIVNGWSAKLKRSSAGEQKWGLFIATK 261
           EK KE F++DFS+EDYDDIV GW +KL+R ++ EQKWGLFIA K
Sbjct: 447 EKEKEKFISDFSKEDYDDIVGGWKSKLERCASDEQKWGLFIANK 490



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>PEAMT_SPIOL (Q9M571) Phosphoethanolamine N-methyltransferase (EC 2.1.1.103)|
          Length = 494

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 28/44 (63%), Positives = 37/44 (84%)
 Frame = -1

Query: 392 EKNKEAFLADFSQEDYDDIVNGWSAKLKRSSAGEQKWGLFIATK 261
           E+ K+ F+ DFS+EDY+DIV+GW AKL R++ GEQ+WGLFIA K
Sbjct: 450 EQEKDDFIDDFSEEDYNDIVDGWKAKLVRTTEGEQQWGLFIAKK 493



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>M3K13_PONPY (Q5R8X7) Mitogen-activated protein kinase kinase kinase 13 (EC|
           2.7.11.25)
          Length = 966

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
 Frame = +1

Query: 1   SRYKXESRSSHNKVQGTHSTYVHIIILQIRVPGRPVQPLQQQITPHPTHGHS------MV 162
           SRY+ + R      +G+HS +V I+           QP Q+  +P+PT+ H        +
Sbjct: 582 SRYRSKPRHRRGNSRGSHSDFVAIL---------KNQPAQEN-SPNPTYLHQAQSQYPSL 631

Query: 163 EHRSSLFNS*PKPKP 207
            HR+SL     +P P
Sbjct: 632 HHRNSLQQQYQQPPP 646



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>M3K13_HUMAN (O43283) Mitogen-activated protein kinase kinase kinase 13 (EC|
           2.7.11.25) (Mixed lineage kinase) (MLK) (Leucine
           zipper-bearing kinase)
          Length = 966

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
 Frame = +1

Query: 1   SRYKXESRSSHNKVQGTHSTYVHIIILQIRVPGRPVQPLQQQITPHPTHGHS------MV 162
           SRY+ + R      +G+HS +  I+           QP Q+  +PHPT+ H        +
Sbjct: 582 SRYRSKPRHRRGNSRGSHSDFAAIL---------KNQPAQEN-SPHPTYLHQAQSQYPSL 631

Query: 163 EHRSSLFNS*PKPKP 207
            H +SL     +P P
Sbjct: 632 HHHNSLQQQYQQPPP 646



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>TF65_CHICK (P98152) Transcription factor p65 (Nuclear factor NF-kappa-B p65|
           subunit)
          Length = 558

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
 Frame = +1

Query: 4   RYKXESRSSHNKVQGTHST-----YVHIIILQIRVPGRPVQPLQQQITPHPTHGHSMV 162
           RYK E RS+   + G HST     +  I +   R PGR    L  +  PH  H H +V
Sbjct: 41  RYKCEGRSA-GSIPGEHSTDSARTHPTIRVNHYRGPGRVRVSLVTKDPPHGPHPHELV 97



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>R1_SOLTU (Q9AWA5) Alpha-glucan water dikinase, chloroplast precursor (EC|
           2.7.9.4) (Starch-related R1 protein)
          Length = 1464

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
 Frame = -1

Query: 359 SQEDYDDIV---NGWSAKLKRSSAGEQKWGLF 273
           S +D +D+V    GW+  L  S+ G+  W LF
Sbjct: 900 SVDDNEDLVYCLKGWNQALSMSNGGDNHWALF 931



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>Y1067_METMP (Q6LYC4) Putative iron-sulfur protein MMP1067|
          Length = 494

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +2

Query: 47  EHTARTY-TSLSYRSGCPAGQCSHC 118
           E+  +TY  ++ +RS C AGQC  C
Sbjct: 30  EYINKTYGENIQFRSSCKAGQCGSC 54



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>BLI1_CAEEL (Q09457) Cuticle collagen bli-1 (Blistered cuticle protein 1)|
          Length = 963

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 88  RVPGRPVQPLQQQITPHPTHGHSMVEHRSSLFNS*PKPK 204
           R P    +P   Q  P  +  HS   +R+SL+N  P PK
Sbjct: 180 REPASSRRPYPPQQPPSTSAPHSSPNNRTSLYNPQPPPK 218


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,591,819
Number of Sequences: 219361
Number of extensions: 729605
Number of successful extensions: 2482
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2481
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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