Clone Name	rbags5p18
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY065971.1| Triticum aestivum phosphoethanolamine methyltrans...	325	6e-86
2	ref|XM_475841.1| Oryza sativa (japonica cultivar-group), predic...	141	2e-30
3	gb|AY103779.1| Zea mays PCO126548 mRNA sequence	133	5e-28
4	gb|AY626156.3| Zea mays putative phosphoethanolamine N-methyltra...	125	1e-25
5	gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome...	111	2e-21
6	gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome...	111	2e-21
7	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	111	2e-21
8	gb|AY551100.1| Oryza sativa (indica cultivar-group) phosphoethan...	68	2e-08
9	dbj|AK069137.1| Oryza sativa (japonica cultivar-group) cDNA clon...	68	2e-08
10	ref|NM_192178.1| Oryza sativa (japonica cultivar-group), predic...	66	9e-08
11	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	66	9e-08
12	dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic D...	66	9e-08
13	dbj|AK102037.1| Oryza sativa (japonica cultivar-group) cDNA clon...	66	9e-08
14	gb|AC108554.8| Rattus norvegicus 7 BAC CH230-81L13 (Children's H...	48	0.022
15	dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp...	44	0.34
16	emb|Z35641.2|CEC38H2 Caenorhabditis elegans Cosmid C38H2, comple...	42	1.3
17	gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete seq...	42	1.3
18	gb|AC008285.7| Drosophila melanogaster clone BACR31P16, complete...	40	5.3
19	ref|XM_589053.2| PREDICTED: Bos taurus similar to zinc finger, M...	40	5.3
20	gb|AE007294.1| Sinorhizobium meliloti 1021 plasmid pSymA section...	40	5.3
21	gb|AC124417.5| Mus musculus BAC clone RP24-313G11 from chromosom...	40	5.3
22	ref|XM_757246.1| Ustilago maydis 521 hypothetical protein (UM061...	40	5.3
23	emb|Z81493.1|CEF01D5 Caenorhabditis elegans Cosmid F01D5, comple...	40	5.3
24	gb|AY223048.1| Schistosoma japonicum clone ZZD120 mRNA sequence	40	5.3
25	emb|AL953854.21| Human DNA sequence from clone RP11-211P14 on ch...	40	5.3
26	emb|BX664730.2| Human DNA sequence from clone RP11-118H15 on chr...	40	5.3
27	emb|AL935212.11| Human DNA sequence from clone RP11-160N1 on chr...	40	5.3
28	emb|AL954685.6| Human DNA sequence from clone RP11-237M21 on chr...	40	5.3
29	emb|AL953883.5| Human DNA sequence from clone RP11-246P17 on chr...	40	5.3
30	emb|AL590311.5| Human DNA sequence from clone RP11-20F16 on chro...	40	5.3
31	emb|AL353791.7| Human DNA sequence from clone RP11-475B17 on chr...	40	5.3
32	emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genom...	40	5.3
33	gb|AC007995.23| Mus musculus, clone RP23-266E9, complete sequence	40	5.3
34	emb|AL683804.15| Mouse DNA sequence from clone RP23-17F2 on chro...	40	5.3
35	dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co...	40	5.3
36	gb|AC012049.8| Homo sapiens chromosome 10 clone RP11-76F22, comp...	40	5.3
37	ref|NM_143309.1| Drosophila melanogaster CG13972-RA (CG13972), mRNA	40	5.3
38	gb|AC022537.8| Homo sapiens chromosome 10 clone RP11-40C11, comp...	40	5.3
39	ref|NM_064535.2| Caenorhabditis elegans F01D5.6 (F01D5.6) mRNA, ...	40	5.3
40	gb|AY194228.1| Enterobacter cloacae succinate dehydrogenase cyto...	40	5.3
41	gb|AC007817.7|AC007817 Drosophila melanogaster, chromosome 3R, r...	40	5.3
42	gb|AC006207.5| Homo sapiens 12 PAC RPCI3-488H23 (Roswell Park Ca...	40	5.3
43	emb|BX545849.7| Mouse DNA sequence from clone RP23-232N16 on chr...	40	5.3
44	gb|AE003761.2| Drosophila melanogaster chromosome 3R, section 99...	40	5.3
45	dbj|AP001803.4| Homo sapiens genomic DNA, chromosome 11q, clone:...	40	5.3
46	emb|AL591855.11| Human DNA sequence from clone RP11-4C12 on chro...	40	5.3

---

>gb|AY065971.1| Triticum aestivum phosphoethanolamine methyltransferase mRNA,
            complete cds
          Length = 1782

 Score =  325 bits (164), Expect = 6e-86
 Identities = 219/234 (93%), Gaps = 5/234 (2%)
 Strand = Plus / Minus

                                                                        
Query: 165  gcaccgatcctctttatttaattcttaaccgaagccgaagccgctctgcttccggatcat 224
            |||||||||||||||||||| |||||||    | | ||||| ||||||||||||||||||
Sbjct: 1635 gcaccgatcctctttattta-ttcttaat---aacagaagcggctctgcttccggatcat 1580

                                                                        
Query: 225  cgcgtagcgtggcgtcgctgctcggcggccagatcacttggtcgcgatgaacagccccca 284
            |||||  |  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1579 cgcgtc-cacggcgtcgctgctcggcggccagatcacttggtcgcgatgaacagccccca 1521

                                                                        
Query: 285  cttctgctcgccggcggagctccgcttcagcttcgcgctccacccgttgacgatgtcgtc 344
            ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1520 cttctgctcgccggcagagctccgcttcagcttcgcgctccagccgttgacgatgtcgtc 1461

                                                                  
Query: 345  gtagtcctcctggctgaagtccgccaggaaggcctccttgttcttctcggtctc 398
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1460 gtagtcctcctgggtgaagtccgccaggaaggcctccttgttcttctcggtctc 1407



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 85/99 (85%), Gaps = 7/99 (7%)
 Strand = Plus / Minus

                                                                        
Query: 4    cgttacaaagncgagtctcgctcgtcacataacaaagttcagggaacacacagcacgtac 63
            |||||||||| ||||||||||||||||||  || |||||||||    | |||  ||||||
Sbjct: 1740 cgttacaaag-cgagtctcgctcgtcacagtac-aagttcagg---aatacaatacgtac 1686

                                                   
Query: 64   gtacacatca--ttatcttacagatccgggtgcccggcc 100
            |||||||| |  |||||||||||||||||||||||||||
Sbjct: 1685 gtacacattatcttatcttacagatccgggtgcccggcc 1647

---

>ref|XM_475841.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1488

 Score =  141 bits (71), Expect = 2e-30
 Identities = 116/131 (88%)
 Strand = Plus / Minus

                                                                        
Query: 262  ttggtcgcgatgaacagcccccacttctgctcgccggcggagctccgcttcagcttcgcg 321
            ||||| || ||||||||||||||| ||||||| ||||| |||||||||||||||||||||
Sbjct: 1484 ttggttgcaatgaacagcccccacctctgctcaccggcagagctccgcttcagcttcgcg 1425

                                                                        
Query: 322  ctccacccgttgacgatgtcgtcgtagtcctcctggctgaagtccgccaggaaggcctcc 381
             |||| ||||| || ||||| ||||||||||||||| ||||||| |||| |||||| || 
Sbjct: 1424 ttccagccgttcacaatgtcatcgtagtcctcctgggtgaagtctgccatgaaggcttct 1365

                       
Query: 382  ttgttcttctc 392
            |||||||||||
Sbjct: 1364 ttgttcttctc 1354

---

>gb|AY103779.1| Zea mays PCO126548 mRNA sequence
          Length = 2333

 Score =  133 bits (67), Expect = 5e-28
 Identities = 121/139 (87%)
 Strand = Plus / Minus

                                                                        
Query: 251  ggccagatcacttggtcgcgatgaacagcccccacttctgctcgccggcggagctccgct 310
            ||||| |||||||||| || ||||||| ||||||| ||||||||||||| |||||||| |
Sbjct: 1913 ggccaaatcacttggtggcaatgaacaacccccacctctgctcgccggcagagctccgtt 1854

                                                                        
Query: 311  tcagcttcgcgctccacccgttgacgatgtcgtcgtagtcctcctggctgaagtccgcca 370
            ||||||||||| |||| || || || |||||||| |||||||||||| ||||||| ||||
Sbjct: 1853 tcagcttcgcgttccagccattcacaatgtcgtcatagtcctcctgggtgaagtctgcca 1794

                               
Query: 371  ggaaggcctccttgttctt 389
            |||| || || ||||||||
Sbjct: 1793 ggaaagcgtctttgttctt 1775

---

>gb|AY626156.3| Zea mays putative phosphoethanolamine N-methyltransferase (PEAMT)
            mRNA, complete cds
          Length = 1806

 Score =  125 bits (63), Expect = 1e-25
 Identities = 120/139 (86%)
 Strand = Plus / Minus

                                                                        
Query: 251  ggccagatcacttggtcgcgatgaacagcccccacttctgctcgccggcggagctccgct 310
            ||||| |||||||||| || ||||||| ||||||| ||||||| ||| | |||||||| |
Sbjct: 1647 ggccaaatcacttggtggcaatgaacaacccccacctctgctcaccgccagagctccgtt 1588

                                                                        
Query: 311  tcagcttcgcgctccacccgttgacgatgtcgtcgtagtcctcctggctgaagtccgcca 370
            ||||||||||| |||| ||||| || |||||||| |||||||||||| ||||||| ||||
Sbjct: 1587 tcagcttcgcgttccagccgttcacaatgtcgtcatagtcctcctgggtgaagtctgcca 1528

                               
Query: 371  ggaaggcctccttgttctt 389
            |||| || || ||||||||
Sbjct: 1527 ggaaagcgtctttgttctt 1509

---

>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05,
             complete sequence
          Length = 141715

 Score =  111 bits (56), Expect = 2e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                         
Query: 257   atcacttggtcgcgatgaacagcccccacttctgctcgccggcggagctccgcttcagct 316
             |||| ||||| || ||||||||||||||| ||||||| ||||| ||||||||||||||||
Sbjct: 14613 atcatttggttgcaatgaacagcccccacctctgctcaccggcagagctccgcttcagct 14672

                                                     
Query: 317   tcgcgctccacccgttgacgatgtcgtcgtagtcctcctg 356
             ||||| |||| ||||| || ||||| ||||||||||||||
Sbjct: 14673 tcgcgttccagccgttcacaatgtcatcgtagtcctcctg 14712



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 353   cctggctgaagtccgccaggaaggcctccttgttcttctc 392
             ||||| ||||||| |||| |||||| || |||||||||||
Sbjct: 14799 cctgggtgaagtctgccatgaaggcttctttgttcttctc 14838

---

>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08,
             complete sequence
          Length = 166218

 Score =  111 bits (56), Expect = 2e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                         
Query: 257   atcacttggtcgcgatgaacagcccccacttctgctcgccggcggagctccgcttcagct 316
             |||| ||||| || ||||||||||||||| ||||||| ||||| ||||||||||||||||
Sbjct: 40454 atcatttggttgcaatgaacagcccccacctctgctcaccggcagagctccgcttcagct 40513

                                                     
Query: 317   tcgcgctccacccgttgacgatgtcgtcgtagtcctcctg 356
             ||||| |||| ||||| || ||||| ||||||||||||||
Sbjct: 40514 tcgcgttccagccgttcacaatgtcatcgtagtcctcctg 40553



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 353   cctggctgaagtccgccaggaaggcctccttgttcttctc 392
             ||||| ||||||| |||| |||||| || |||||||||||
Sbjct: 40640 cctgggtgaagtctgccatgaaggcttctttgttcttctc 40679

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  111 bits (56), Expect = 2e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                            
Query: 257      atcacttggtcgcgatgaacagcccccacttctgctcgccggcggagctccgcttcagct 316
                |||| ||||| || ||||||||||||||| ||||||| ||||| ||||||||||||||||
Sbjct: 27008031 atcatttggttgcaatgaacagcccccacctctgctcaccggcagagctccgcttcagct 27008090

                                                        
Query: 317      tcgcgctccacccgttgacgatgtcgtcgtagtcctcctg 356
                ||||| |||| ||||| || ||||| ||||||||||||||
Sbjct: 27008091 tcgcgttccagccgttcacaatgtcatcgtagtcctcctg 27008130



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 353      cctggctgaagtccgccaggaaggcctccttgttcttctc 392
                ||||| ||||||| |||| |||||| || |||||||||||
Sbjct: 27008217 cctgggtgaagtctgccatgaaggcttctttgttcttctc 27008256

---

>gb|AY551100.1| Oryza sativa (indica cultivar-group) phosphoethanolamine
            N-methyltransferase (PEAMT) mRNA, complete cds
          Length = 1986

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 88/106 (83%)
 Strand = Plus / Minus

                                                                        
Query: 257  atcacttggtcgcgatgaacagcccccacttctgctcgccggcggagctccgcttcagct 316
            ||||||||||||||||||||||||||||| ||||||| || || || ||||  |  || |
Sbjct: 1699 atcacttggtcgcgatgaacagcccccacctctgctcaccagcagaactcctttgaagtt 1640

                                                          
Query: 317  tcgcgctccacccgttgacgatgtcgtcgtagtcctcctggctgaa 362
            | ||  |||| || || || ||| ||||||||||||||||||||||
Sbjct: 1639 ttgccttccatccattcacaatggcgtcgtagtcctcctggctgaa 1594

---

>dbj|AK069137.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008P07, full
            insert sequence
          Length = 2069

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 88/106 (83%)
 Strand = Plus / Minus

                                                                        
Query: 257  atcacttggtcgcgatgaacagcccccacttctgctcgccggcggagctccgcttcagct 316
            ||||||||||||||||||||||||||||| ||||||| || || || ||||  |  || |
Sbjct: 1784 atcacttggtcgcgatgaacagcccccacctctgctcaccagcagaactcctttgaagtt 1725

                                                          
Query: 317  tcgcgctccacccgttgacgatgtcgtcgtagtcctcctggctgaa 362
            | ||  |||| || || || ||| ||||||||||||||||||||||
Sbjct: 1724 ttgccttccatccattcacaatggcgtcgtagtcctcctggctgaa 1679

---

>ref|NM_192178.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1500

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 87/105 (82%)
 Strand = Plus / Minus

                                                                        
Query: 258  tcacttggtcgcgatgaacagcccccacttctgctcgccggcggagctccgcttcagctt 317
            |||||||||||||||||||||||||||| ||||||| || || || ||||  |  || ||
Sbjct: 1500 tcacttggtcgcgatgaacagcccccacctctgctcaccagcagaactcctttgaagttt 1441

                                                         
Query: 318  cgcgctccacccgttgacgatgtcgtcgtagtcctcctggctgaa 362
             ||  |||| || || || ||| ||||||||||||||||||||||
Sbjct: 1440 tgccttccatccattcacaatggcgtcgtagtcctcctggctgaa 1396

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                     
Query: 257      atcacttggtcgcgatgaacagcccccacttctgctc 293
                ||||||||||||||||||||||||||||| |||||||
Sbjct: 28737732 atcacttggtcgcgatgaacagcccccacctctgctc 28737696

---

>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0431H09
          Length = 166886

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                   
Query: 257    atcacttggtcgcgatgaacagcccccacttctgctc 293
              ||||||||||||||||||||||||||||| |||||||
Sbjct: 120806 atcacttggtcgcgatgaacagcccccacctctgctc 120770

---

>dbj|AK102037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033081D06, full
            insert sequence
          Length = 3221

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                 
Query: 257  atcacttggtcgcgatgaacagcccccacttctgctc 293
            ||||||||||||||||||||||||||||| |||||||
Sbjct: 2984 atcacttggtcgcgatgaacagcccccacctctgctc 2948

---

>gb|AC108554.8| Rattus norvegicus 7 BAC CH230-81L13 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 157107

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 169   cgatcctctttatttaattcttaa 192
             ||||||||||||||||||||||||
Sbjct: 32346 cgatcctctttatttaattcttaa 32369

---

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 333     gacgatgtcgtcgtagtcctcc 354
               ||||||||||||||||||||||
Sbjct: 1075622 gacgatgtcgtcgtagtcctcc 1075601

---

>emb|Z35641.2|CEC38H2 Caenorhabditis elegans Cosmid C38H2, complete sequence
          Length = 31950

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 283   cacttctgctcgccggcggag 303
             |||||||||||||||||||||
Sbjct: 15748 cacttctgctcgccggcggag 15768

---

>gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence
          Length = 536165

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 332    tgacgatgtcgtcgtagtcct 352
              |||||||||||||||||||||
Sbjct: 377931 tgacgatgtcgtcgtagtcct 377951



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 332    tgacgatgtcgtcgtagtcct 352
              |||||||||||||||||||||
Sbjct: 320695 tgacgatgtcgtcgtagtcct 320715

---

>gb|AC008285.7| Drosophila melanogaster clone BACR31P16, complete sequence
          Length = 177084

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 308    gcttcagcttcgcgctccacccgt 331
              |||||||||||||| |||||||||
Sbjct: 169464 gcttcagcttcgcgatccacccgt 169487

---

>ref|XM_589053.2| PREDICTED: Bos taurus similar to zinc finger, MYND domain containing
            15 (LOC539735), mRNA
          Length = 2251

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 367  gccaggaaggcctccttgtt 386
            ||||||||||||||||||||
Sbjct: 1085 gccaggaaggcctccttgtt 1066

---

>gb|AE007294.1| Sinorhizobium meliloti 1021 plasmid pSymA section 100 of 121 of the
            complete plasmid sequence
          Length = 9983

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 194  cgaagccgaagccgctctgc 213
            ||||||||||||||||||||
Sbjct: 5324 cgaagccgaagccgctctgc 5305

---

>gb|AC124417.5| Mus musculus BAC clone RP24-313G11 from chromosome 18, complete
           sequence
          Length = 181811

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 345 gtagtcctcctggctgaagt 364
           ||||||||||||||||||||
Sbjct: 711 gtagtcctcctggctgaagt 730

---

>ref|XM_757246.1| Ustilago maydis 521 hypothetical protein (UM06192.1) partial mRNA
          Length = 3558

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 139 ccaacacacggccacagcat 158
           ||||||||||||||||||||
Sbjct: 632 ccaacacacggccacagcat 651

---

>emb|Z81493.1|CEF01D5 Caenorhabditis elegans Cosmid F01D5, complete sequence
          Length = 36127

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 379   tccttgttcttctcggtctc 398
             ||||||||||||||||||||
Sbjct: 13295 tccttgttcttctcggtctc 13276

---

>gb|AY223048.1| Schistosoma japonicum clone ZZD120 mRNA sequence
          Length = 1179

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 108 gcagccactgcaacaacaaa 127
           ||||||||||||||||||||
Sbjct: 878 gcagccactgcaacaacaaa 897

---

>emb|AL953854.21| Human DNA sequence from clone RP11-211P14 on chromosome 9 Contains a
             pseudogene similar to part of a vomeronasal 2 family
             protein and a novel protein similar to contactin
             associated protein-like 3 (CNTNAP3), complete sequence
          Length = 157546

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   tctttatttaattcttaacc 194
             ||||||||||||||||||||
Sbjct: 41424 tctttatttaattcttaacc 41405

---

>emb|BX664730.2| Human DNA sequence from clone RP11-118H15 on chromosome 9 Contains a
              novel gene, complete sequence
          Length = 171251

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    tctttatttaattcttaacc 194
              ||||||||||||||||||||
Sbjct: 158902 tctttatttaattcttaacc 158883

---

>emb|AL935212.11| Human DNA sequence from clone RP11-160N1 on chromosome 9 Contains
           eight novel pseudogenes, two novel genes and three CpG
           islands, complete sequence
          Length = 181647

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 175 tctttatttaattcttaacc 194
           ||||||||||||||||||||
Sbjct: 548 tctttatttaattcttaacc 567

---

>emb|AL954685.6| Human DNA sequence from clone RP11-237M21 on chromosome 9, complete
             sequence
          Length = 130124

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   tctttatttaattcttaacc 194
             ||||||||||||||||||||
Sbjct: 70560 tctttatttaattcttaacc 70579

---

>emb|AL953883.5| Human DNA sequence from clone RP11-246P17 on chromosome 9, complete
             sequence
          Length = 102894

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   tctttatttaattcttaacc 194
             ||||||||||||||||||||
Sbjct: 81891 tctttatttaattcttaacc 81872

---

>emb|AL590311.5| Human DNA sequence from clone RP11-20F16 on chromosome 9 Contains the
             5' end of the GDA gene for guanine deaminase and a CpG
             island, complete sequence
          Length = 131933

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   tcctctttatttaattctta 191
             ||||||||||||||||||||
Sbjct: 24338 tcctctttatttaattctta 24319

---

>emb|AL353791.7| Human DNA sequence from clone RP11-475B17 on chromosome 9 Contains the 3'
              end of novel protein similar to contactin associated
              protein-like 3 (CNTNAP3) and a pseudogene similar to part
              of vomeronasal 2 family, complete sequence
          Length = 208233

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    tctttatttaattcttaacc 194
              ||||||||||||||||||||
Sbjct: 104698 tctttatttaattcttaacc 104717

---

>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16
          Length = 348580

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   cgctgctcggcggccagatc 259
             ||||||||||||||||||||
Sbjct: 96941 cgctgctcggcggccagatc 96960

---

>gb|AC007995.23| Mus musculus, clone RP23-266E9, complete sequence
          Length = 204193

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 345    gtagtcctcctggctgaagt 364
              ||||||||||||||||||||
Sbjct: 185351 gtagtcctcctggctgaagt 185370

---

>emb|AL683804.15| Mouse DNA sequence from clone RP23-17F2 on chromosome 1 Contains  a
             SEC61 gamma subunit (Sec61g) pseudogene, a limb expression
             1 homolog (chicken) (Lix1) pseudogene, a novel pseudogene,
             the 5' end of the gene for an ortholog of human Ras
             association (RalGDS/AF-6) and pleckstrin homology domains
             1 RAPH1 and a CpG island, complete sequence
          Length = 198631

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    acatcattatcttacagatc 87
             ||||||||||||||||||||
Sbjct: 85216 acatcattatcttacagatc 85235

---

>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 234     tggcgtcgctgctcggcggc 253
               ||||||||||||||||||||
Sbjct: 1266679 tggcgtcgctgctcggcggc 1266698

---

>gb|AC012049.8| Homo sapiens chromosome 10 clone RP11-76F22, complete sequence
          Length = 142656

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 171    atcctctttatttaattctt 190
              ||||||||||||||||||||
Sbjct: 125275 atcctctttatttaattctt 125294

---

>ref|NM_143309.1| Drosophila melanogaster CG13972-RA (CG13972), mRNA
          Length = 1347

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 308  gcttcagcttcgcgctccacccgt 331
            |||||||||||||| |||||||||
Sbjct: 1094 gcttcagcttcgcgatccacccgt 1071

---

>gb|AC022537.8| Homo sapiens chromosome 10 clone RP11-40C11, complete sequence
          Length = 154939

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   atcctctttatttaattctt 190
             ||||||||||||||||||||
Sbjct: 76263 atcctctttatttaattctt 76282

---

>ref|NM_064535.2| Caenorhabditis elegans F01D5.6 (F01D5.6) mRNA, complete cds
          Length = 1303

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 379  tccttgttcttctcggtctc 398
            ||||||||||||||||||||
Sbjct: 1109 tccttgttcttctcggtctc 1090

---

>gb|AY194228.1| Enterobacter cloacae succinate dehydrogenase cytochrome b-556 subunit
            (sdhC), succinate dehydrogenase hydrophobic membrane
            anchor protein (sdhD), succinate dehydrogenase
            flavoprotein subunit (sdhA), and succinate dehydrogenase
            iron-sulfur protein (sdhB) genes, complete cds; and
            2-oxoglutarate dehydrogenase E1 component (sucA) gene,
            partial cds
          Length = 6771

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 280  ccccacttctgctcgccggcggag 303
            ||||||||||||||||||| ||||
Sbjct: 6123 ccccacttctgctcgccggaggag 6100

---

>gb|AC007817.7|AC007817 Drosophila melanogaster, chromosome 3R, region 98A-98B, BAC clone
             BACR15D01, complete sequence
          Length = 180499

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 308   gcttcagcttcgcgctccacccgt 331
             |||||||||||||| |||||||||
Sbjct: 30801 gcttcagcttcgcgatccacccgt 30824

---

>gb|AC006207.5| Homo sapiens 12 PAC RPCI3-488H23 (Roswell Park Cancer Institute Human
             PAC Library) complete sequence
          Length = 109003

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 214   ttccggatcatcgcgtagcgtggc 237
             |||| |||||||||||||||||||
Sbjct: 92074 ttcctgatcatcgcgtagcgtggc 92051

---

>emb|BX545849.7| Mouse DNA sequence from clone RP23-232N16 on chromosome 4, complete
             sequence
          Length = 114104

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   gcaacaacaaatcacaccac 136
             ||||||||||||||||||||
Sbjct: 44262 gcaacaacaaatcacaccac 44243

---

>gb|AE003761.2| Drosophila melanogaster chromosome 3R, section 99 of 118 of the
             complete sequence
          Length = 224910

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 308   gcttcagcttcgcgctccacccgt 331
             |||||||||||||| |||||||||
Sbjct: 79987 gcttcagcttcgcgatccacccgt 80010

---

>dbj|AP001803.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-100N3, complete
              sequences
          Length = 159372

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    tcctctttatttaattctta 191
              ||||||||||||||||||||
Sbjct: 103987 tcctctttatttaattctta 104006

---

>emb|AL591855.11| Human DNA sequence from clone RP11-4C12 on chromosome 9, complete
            sequence
          Length = 153214

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 175  tctttatttaattcttaacc 194
            ||||||||||||||||||||
Sbjct: 6785 tctttatttaattcttaacc 6804


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,334,485
Number of Sequences: 3902068
Number of extensions: 3334485
Number of successful extensions: 69488
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69269
Number of HSP's gapped (non-prelim): 217
length of query: 398
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 376
effective length of database: 17,147,199,772
effective search space: 6447347114272
effective search space used: 6447347114272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---