| Clone Name | rbags6e19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197014.1| Oryza sativa (japonica cultivar-group) cytoplasmic malate dehydrogenase (OSJNBa0055P24.3), mRNA Length = 1381 Score = 65.9 bits (33), Expect = 3e-08 Identities = 41/44 (93%) Strand = Plus / Minus Query: 112 aggcatgagtaagccagcgccttctnctccgacagctcctgggc 155 |||||||||||||| |||| ||||| |||||||||||||||||| Sbjct: 1090 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggc 1047
>gb|DQ083217.1| Oryza sativa (indica cultivar-group) clone 8S3C18 mRNA sequence Length = 360 Score = 65.9 bits (33), Expect = 3e-08 Identities = 41/44 (93%) Strand = Plus / Minus Query: 112 aggcatgagtaagccagcgccttctnctccgacagctcctgggc 155 |||||||||||||| |||| ||||| |||||||||||||||||| Sbjct: 175 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggc 132
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 65.9 bits (33), Expect = 3e-08 Identities = 41/44 (93%) Strand = Plus / Minus Query: 112 aggcatgagtaagccagcgccttctnctccgacagctcctgggc 155 |||||||||||||| |||| ||||| |||||||||||||||||| Sbjct: 17402508 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggc 17402465
>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete sequence Length = 134058 Score = 65.9 bits (33), Expect = 3e-08 Identities = 41/44 (93%) Strand = Plus / Minus Query: 112 aggcatgagtaagccagcgccttctnctccgacagctcctgggc 155 |||||||||||||| |||| ||||| |||||||||||||||||| Sbjct: 31503 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggc 31460
>dbj|AK104691.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-G07, full insert sequence Length = 1326 Score = 65.9 bits (33), Expect = 3e-08 Identities = 41/44 (93%) Strand = Plus / Minus Query: 112 aggcatgagtaagccagcgccttctnctccgacagctcctgggc 155 |||||||||||||| |||| ||||| |||||||||||||||||| Sbjct: 1096 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggc 1053
>dbj|AK066396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064D20, full insert sequence Length = 1392 Score = 65.9 bits (33), Expect = 3e-08 Identities = 41/44 (93%) Strand = Plus / Minus Query: 112 aggcatgagtaagccagcgccttctnctccgacagctcctgggc 155 |||||||||||||| |||| ||||| |||||||||||||||||| Sbjct: 1101 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggc 1058
>gb|AF353203.1| Oryza sativa cytoplasmic malate dehydrogenase mRNA, complete cds Length = 1371 Score = 65.9 bits (33), Expect = 3e-08 Identities = 41/44 (93%) Strand = Plus / Minus Query: 112 aggcatgagtaagccagcgccttctnctccgacagctcctgggc 155 |||||||||||||| |||| ||||| |||||||||||||||||| Sbjct: 1081 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggc 1038
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 65.9 bits (33), Expect = 3e-08 Identities = 41/44 (93%) Strand = Plus / Minus Query: 112 aggcatgagtaagccagcgccttctnctccgacagctcctgggc 155 |||||||||||||| |||| ||||| |||||||||||||||||| Sbjct: 17411548 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggc 17411505
>gb|BT016453.1| Zea mays clone Contig286 mRNA sequence Length = 1354 Score = 60.0 bits (30), Expect = 2e-06 Identities = 47/53 (88%) Strand = Plus / Minus Query: 103 atttactcaaggcatgagtaagccagcgccttctnctccgacagctcctgggc 155 |||||||| |||||||||||||| |||| ||||| ||||| |||||| ||||| Sbjct: 1087 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggc 1035
>gb|DQ167567.1| Zea mays clone MCI21 mRNA sequence Length = 282 Score = 60.0 bits (30), Expect = 2e-06 Identities = 47/53 (88%) Strand = Plus / Minus Query: 103 atttactcaaggcatgagtaagccagcgccttctnctccgacagctcctgggc 155 |||||||| |||||||||||||| |||| ||||| ||||| |||||| ||||| Sbjct: 60 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggc 8
>gb|AF379609.1|AF379609 Zea mays malate dehydrogenase mRNA, partial cds Length = 529 Score = 60.0 bits (30), Expect = 2e-06 Identities = 47/53 (88%) Strand = Plus / Minus Query: 103 atttactcaaggcatgagtaagccagcgccttctnctccgacagctcctgggc 155 |||||||| |||||||||||||| |||| ||||| ||||| |||||| ||||| Sbjct: 335 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggc 283
>gb|AY109362.1| Zea mays CL1892_2 mRNA sequence Length = 943 Score = 60.0 bits (30), Expect = 2e-06 Identities = 47/53 (88%) Strand = Plus / Minus Query: 103 atttactcaaggcatgagtaagccagcgccttctnctccgacagctcctgggc 155 |||||||| |||||||||||||| |||| ||||| ||||| |||||| ||||| Sbjct: 916 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggc 864
>gb|AF007581.1|AF007581 Zea mays cytoplasmic malate dehydrogenase mRNA, complete cds Length = 1275 Score = 60.0 bits (30), Expect = 2e-06 Identities = 47/53 (88%) Strand = Plus / Minus Query: 103 atttactcaaggcatgagtaagccagcgccttctnctccgacagctcctgggc 155 |||||||| |||||||||||||| |||| ||||| ||||| |||||| ||||| Sbjct: 1078 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggc 1026
>emb|CR954247.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome II, complete sequence Length = 635328 Score = 42.1 bits (21), Expect = 0.49 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 atttactcaaggcatgagtaa 123 ||||||||||||||||||||| Sbjct: 505077 atttactcaaggcatgagtaa 505057
>gb|AC121571.4| Mus musculus BAC clone RP23-231J6 from 3, complete sequence Length = 195006 Score = 42.1 bits (21), Expect = 0.49 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 gtttcttttattcaaaacatnaga 78 |||||||||||||||||||| ||| Sbjct: 131186 gtttcttttattcaaaacatcaga 131163
>gb|AF346003.1|AF346003 Lolium perenne malate dehydrogenase mRNA, partial cds Length = 587 Score = 42.1 bits (21), Expect = 0.49 Identities = 38/44 (86%) Strand = Plus / Minus Query: 112 aggcatgagtaagccagcgccttctnctccgacagctcctgggc 155 ||||| ||||| || || ||||||| |||||| ||||||||||| Sbjct: 344 aggcacgagtaggcgagagccttctcctccgagagctcctgggc 301 Score = 38.2 bits (19), Expect = 7.6 Identities = 21/22 (95%) Strand = Plus / Minus Query: 59 cttttattcaaaacatnagagc 80 |||||||||||||||| ||||| Sbjct: 396 cttttattcaaaacatcagagc 375
>gb|AC079243.7| Mus musculus strain C57BL6/J chromosome 6 clone RP23-64M7, complete sequence Length = 205508 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 gtgcagctgttctgggtgga 33 |||||||||||||||||||| Sbjct: 41094 gtgcagctgttctgggtgga 41113
>gb|AC102103.10| Mus musculus chromosome 15, clone RP23-82K1, complete sequence Length = 237423 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 131360 agagcatcaactgctcttc 131342
>gb|BC049855.1| Mus musculus echinoderm microtubule associated protein like 5, mRNA (cDNA clone IMAGE:5368750) Length = 657 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 338 agagcatcaactgctcttc 356
>gb|AC120348.9| Mus musculus chromosome 5, clone RP23-55P22, complete sequence Length = 244565 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 23650 agagcatcaactgctcttc 23668
>gb|AC158304.11| Mus musculus chromosome 7, clone RP24-192F23, complete sequence Length = 166451 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 26317 agagcatcaactgctcttc 26335
>gb|AC104414.8| Mus musculus chromosome 3, clone RP23-99I7, complete sequence Length = 212613 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 196425 agagcatcaactgctcttc 196407
>gb|AC109205.12| Mus musculus chromosome 7, clone RP23-137A4, complete sequence Length = 225302 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 117670 agagcatcaactgctcttc 117688
>gb|AC102270.8| Mus musculus chromosome 3, clone RP24-266A23, complete sequence Length = 185321 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 9323 agagcatcaactgctcttc 9305
>gb|AC138641.10| Mus musculus chromosome 5, clone RP23-466K15, complete sequence Length = 175628 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 77250 agagcatcaactgctcttc 77232
>gb|AC140468.2| Mus musculus BAC clone RP24-394C15 from chromosome 3, complete sequence Length = 168853 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 152398 agagcatcaactgctcttc 152416
>gb|BC053105.1| Mus musculus phosphorylase kinase beta, mRNA (cDNA clone MGC:62514 IMAGE:6409425), complete cds Length = 4640 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 ggtttcttttattcaaaac 72 ||||||||||||||||||| Sbjct: 729 ggtttcttttattcaaaac 747
>ref|NM_199446.1| Mus musculus phosphorylase kinase beta (Phkb), mRNA Length = 4640 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 ggtttcttttattcaaaac 72 ||||||||||||||||||| Sbjct: 729 ggtttcttttattcaaaac 747
>gb|AC112682.12| Mus musculus chromosome 6, clone RP23-332K10, complete sequence Length = 206903 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 126556 agagcatcaactgctcttc 126538
>gb|AC099934.14| Mus musculus chromosome 12, clone RP23-17K9, complete sequence Length = 234795 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 227933 agagcatcaactgctcttc 227951
>gb|AC110903.25| Mus musculus chromosome 7, clone RP24-174G2, complete sequence Length = 181076 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 72464 agagcatcaactgctcttc 72482
>gb|AC161600.6| Mus musculus BAC clone RP23-350K3 from chromosome 3, complete sequence Length = 218929 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 103454 agagcatcaactgctcttc 103472
>ref|XM_974826.1| PREDICTED: Mus musculus echinoderm microtubule associated protein like 5, transcript variant 3 (Eml5), mRNA Length = 6365 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 725 agagcatcaactgctcttc 743
>ref|XM_901317.2| PREDICTED: Mus musculus echinoderm microtubule associated protein like 5, transcript variant 2 (Eml5), mRNA Length = 6364 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 725 agagcatcaactgctcttc 743
>gb|AC129304.6| Mus musculus BAC clone RP24-462H23 from chromosome 10, complete sequence Length = 153772 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 133336 agagcatcaactgctcttc 133354
>gb|AC125321.4| Mus musculus BAC clone RP23-371B13 from chromosome 9, complete sequence Length = 196150 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 8384 agagcatcaactgctcttc 8366
>gb|AC124760.4| Mus musculus BAC clone RP23-133I8 from chromosome 1, complete sequence Length = 230067 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 29448 agagcatcaactgctcttc 29466
>gb|AC126038.4| Mus musculus BAC clone RP24-230C18 from chromosome 8, complete sequence Length = 196490 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 62948 agagcatcaactgctcttc 62930
>gb|AC122447.4| Mus musculus BAC clone RP24-240O5 from chromosome 9, complete sequence Length = 158058 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 37433 agagcatcaactgctcttc 37451
>gb|AC122018.4| Mus musculus BAC clone RP24-361O20 from chromosome 10, complete sequence Length = 173543 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 67094 agagcatcaactgctcttc 67112
>gb|AC124366.4| Mus musculus BAC clone RP24-541E9 from chromosome 1, complete sequence Length = 166555 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 152665 agagcatcaactgctcttc 152647
>gb|AC124586.3| Mus musculus BAC clone RP23-132E20 from 12, complete sequence Length = 188243 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 28200 agagcatcaactgctcttc 28182
>gb|AC084162.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-11P12, complete sequence Length = 159180 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 38793 agagcatcaactgctcttc 38775
>gb|AC122830.4| Mus musculus BAC clone RP23-224I23 from 8, complete sequence Length = 257003 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 ggtttcttttattcaaaac 72 ||||||||||||||||||| Sbjct: 123833 ggtttcttttattcaaaac 123851
>gb|AC123955.5| Mus musculus BAC clone RP23-274C16 from 1, complete sequence Length = 189764 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 21879 agagcatcaactgctcttc 21861
>gb|AC117185.2| Mus musculus BAC clone RP23-37M7 from 8, complete sequence Length = 188791 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 ggtttcttttattcaaaac 72 ||||||||||||||||||| Sbjct: 164233 ggtttcttttattcaaaac 164251
>gb|AC112258.4| Mus musculus BAC clone RP23-169M10 from 8, complete sequence Length = 203519 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 37896 agagcatcaactgctcttc 37914
>emb|AL731653.1| Human DNA sequence from clone RP11-33D13 on chromosome 10 Contains the gene for pancreatic lipase (PNLIP) and a pseudogene similar to part of pancreatic lipase (PNLIP), complete sequence Length = 65205 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 56 tttcttttattcaaaacat 74 ||||||||||||||||||| Sbjct: 20779 tttcttttattcaaaacat 20761
>emb|AL445467.6| Human DNA sequence from clone RP11-311M14 on chromosome X Contains the 5' end of the CTPS2 gene for CTP synthase II, the CALB3 gene for calbindin 3 (vitamin D-dependent calcium binding protein), the SYAP1 gene for synapse associated protein 1 SAP47 homolog (Drosophila) and two CpG islands, complete sequence Length = 166336 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 91 cttcgaatgttgatttact 109 ||||||||||||||||||| Sbjct: 31688 cttcgaatgttgatttact 31670
>emb|AL162253.17| Human DNA sequence from clone RP11-574F11 on chromosome 9 Contains the gene for B7-H1 protein (PD-L1), the gene for programmed death ligand 2 (PDL2) (PDCD1L2) and a novel gene, complete sequence Length = 146327 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 56 tttcttttattcaaaacat 74 ||||||||||||||||||| Sbjct: 59881 tttcttttattcaaaacat 59863
>gb|AC163019.5| Mus musculus chromosome 19, clone RP24-290E5, complete sequence Length = 152969 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 104187 agagcatcaactgctcttc 104205
>gb|AC153144.4| Mus musculus BAC clone RP23-220J15 from chromosome 13, complete sequence Length = 178032 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 165135 agagcatcaactgctcttc 165153
>gb|AC132315.4| Mus musculus BAC clone RP24-234J3 from chromosome 12, complete sequence Length = 181828 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 167357 agagcatcaactgctcttc 167339
>gb|AC153155.6| Mus musculus BAC clone RP23-25J23 from chromosome 18, complete sequence Length = 227880 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 133068 agagcatcaactgctcttc 133086
>emb|AL607024.17| Mouse DNA sequence from clone RP23-194P5 on chromosome 11 Contains a novel gene, the Pafah1b1 gene for platelet-activating factor acetylhydrolase isoform 1b beta1 subunit, the 5' end of a novel gene and two CpG islands, complete sequence Length = 137908 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 53154 agagcatcaactgctcttc 53172
>gb|AC160132.2| Mus musculus BAC clone RP23-197I12 from chromosome 9, complete sequence Length = 202786 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 198215 agagcatcaactgctcttc 198233
>gb|AC159242.2| Mus musculus BAC clone RP24-325A23 from chromosome 13, complete sequence Length = 193570 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 126303 agagcatcaactgctcttc 126321
>gb|AC074312.64| Mus musculus strain C57BL/6J clone rp23-311c19 map 7, complete sequence Length = 220077 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 201855 agagcatcaactgctcttc 201873
>gb|AC009287.17| Mus musculus strain 129S6/SvEvTac chromosome 10 clone rp21-668b24, complete sequence Length = 160785 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 19285 agagcatcaactgctcttc 19267
>dbj|AK153605.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630017J04 product:unclassifiable, full insert sequence Length = 1434 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 1302 agagcatcaactgctcttc 1284
>dbj|AK165815.1| Mus musculus 13 days embryo brain cDNA, RIKEN full-length enriched library, clone:G630093B19 product:phosphorylase kinase beta, full insert sequence Length = 1015 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 ggtttcttttattcaaaac 72 ||||||||||||||||||| Sbjct: 724 ggtttcttttattcaaaac 742
>gb|AC157822.2| Mus musculus BAC clone RP23-392J15 from chromosome 12, complete sequence Length = 185536 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 163688 agagcatcaactgctcttc 163670
>gb|AC159193.2| Mus musculus BAC clone RP24-68E20 from chromosome 12, complete sequence Length = 243976 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 142536 agagcatcaactgctcttc 142554
>gb|AC136636.6| Mus musculus BAC clone RP24-183E22 from chromosome 1, complete sequence Length = 182542 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 147621 agagcatcaactgctcttc 147603
>gb|AC000091.1| Homo sapiens Chromosome 22q11.2 Cosmid Clone 91c In DGCR Region, complete sequence Length = 44928 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 cagctgttctgggtggaca 35 ||||||||||||||||||| Sbjct: 10712 cagctgttctgggtggaca 10694
>dbj|AK089493.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730039M10 product:similar to phosphorylase kinase (EC 2.7.1.38) beta chain [Homo sapiens], full insert sequence Length = 1972 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 ggtttcttttattcaaaac 72 ||||||||||||||||||| Sbjct: 767 ggtttcttttattcaaaac 785
>gb|AC154767.2| Mus musculus BAC clone RP23-105P19 from chromosome 13, complete sequence Length = 189362 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 180908 agagcatcaactgctcttc 180890
>gb|AC104201.12| Mus musculus chromosome 19, clone RP24-531I1, complete sequence Length = 166165 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 133859 agagcatcaactgctcttc 133877
>emb|AL845323.18| Mouse DNA sequence from clone RP23-304D11 on chromosome 2, complete sequence Length = 228137 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 94197 agagcatcaactgctcttc 94215
>emb|BX294119.5| Zebrafish DNA sequence from clone CH211-113D22 in linkage group 10, complete sequence Length = 167603 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 gtttcttttattcaaaaca 73 ||||||||||||||||||| Sbjct: 130083 gtttcttttattcaaaaca 130065
>emb|BX539342.9| Mouse DNA sequence from clone RP24-67F19 on chromosome 7, complete sequence Length = 155752 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 21666 agagcatcaactgctcttc 21648
>gb|AC144461.33| Mus musculus strain C57BL/6J clone rp23-427m23, complete sequence Length = 164848 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 115654 agagcatcaactgctcttc 115636
>gb|AC138765.9| Mus musculus chromosome 15, clone RP23-30B1, complete sequence Length = 204614 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 97635 agagcatcaactgctcttc 97653
>gb|BC030361.1| Mus musculus echinoderm microtubule associated protein like 5, mRNA (cDNA clone IMAGE:5368750), complete cds Length = 668 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 349 agagcatcaactgctcttc 367
>gb|U95119.1|MMU95119 Mus musculus Pafaha/Lis1 exon 3, complete sequence Length = 13407 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 10107 agagcatcaactgctcttc 10089
>emb|AL935150.10| Mouse DNA sequence from clone RP24-482A24 on chromosome 2, complete sequence Length = 163240 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 16918 agagcatcaactgctcttc 16936
>gb|AC135859.4| Mus musculus BAC clone RP24-151D9 from 10, complete sequence Length = 182809 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 138470 agagcatcaactgctcttc 138452
>gb|AC146596.4| Mus musculus BAC clone RP24-175L7 from 13, complete sequence Length = 163780 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 19761 agagcatcaactgctcttc 19779
>gb|AC155170.3| Mus musculus BAC clone RP23-116K3 from chromosome 8, complete sequence Length = 228121 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 117699 agagcatcaactgctcttc 117717
>emb|CT025521.10| Mouse DNA sequence from clone RP23-337J16 on chromosome 16, complete sequence Length = 200017 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 72525 agagcatcaactgctcttc 72543
>gb|AC139316.4| Mus musculus BAC clone RP24-500I24 from 3, complete sequence Length = 187000 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 59921 agagcatcaactgctcttc 59939
>gb|AC004087.1|AC004087 Homo sapiens Xp22 GSHB-314C4 (Genome Systems Human BAC library) complete sequence Length = 124791 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 91 cttcgaatgttgatttact 109 ||||||||||||||||||| Sbjct: 5620 cttcgaatgttgatttact 5638
>gb|AC148011.3| Mus musculus BAC clone RP23-202I21 from 18, complete sequence Length = 220253 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 162297 agagcatcaactgctcttc 162279
>gb|AC140324.3| Mus musculus BAC clone RP23-402K14 from 6, complete sequence Length = 200190 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 67670 agagcatcaactgctcttc 67688
>emb|AL807832.6| Mouse DNA sequence from clone RP23-198D21 on chromosome 2, complete sequence Length = 192480 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 119537 agagcatcaactgctcttc 119555
>emb|AL845503.5| Mouse DNA sequence from clone RP23-292G16 on chromosome 2, complete sequence Length = 148491 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 60141 agagcatcaactgctcttc 60123
>emb|AL731552.11| Mouse DNA sequence from clone RP23-113K24 on chromosome 2, complete sequence Length = 203304 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 143705 agagcatcaactgctcttc 143723
>gb|AC162179.2| Mus musculus BAC clone RP23-197K11 from chromosome 9, complete sequence Length = 210741 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 195826 agagcatcaactgctcttc 195808
>gb|AC118475.44| Mus musculus chromosome 13, clone RP23-359G8, complete sequence Length = 190284 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 98995 agagcatcaactgctcttc 98977
>emb|X00334.1|DVPDV19 Drosophila virilis simple DNA sequence (pDv-19) Length = 710 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 89 ctcttcgaatgttgattta 107 ||||||||||||||||||| Sbjct: 560 ctcttcgaatgttgattta 578
>emb|AL603826.18| Mouse DNA sequence from clone RP23-206P11 on chromosome 11, complete sequence Length = 145299 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 26488 agagcatcaactgctcttc 26506
>emb|AL663032.9| Mouse DNA sequence from clone RP23-27I6 on chromosome X, complete sequence Length = 162995 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agagcatcaactgctcttc 94 ||||||||||||||||||| Sbjct: 148486 agagcatcaactgctcttc 148504 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,175,896 Number of Sequences: 3902068 Number of extensions: 1175896 Number of successful extensions: 75830 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75635 Number of HSP's gapped (non-prelim): 195 length of query: 158 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 136 effective length of database: 17,147,199,772 effective search space: 2332019168992 effective search space used: 2332019168992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)