ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags6e14 |
|---|---|
| Clone Library Name | barley_pub |
>HERC2_DROME (Q9VR91) HECT domain and RCC1-like domain-containing protein 2| Length = 4912 Score = 39.7 bits (91), Expect = 0.006 Identities = 18/37 (48%), Positives = 23/37 (62%) Frame = -1 Query: 556 AFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALS 446 A T N+ WGRGT +LGHG DR+ P ++ ALS Sbjct: 682 AITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALS 718 Score = 38.5 bits (88), Expect = 0.013 Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 7/85 (8%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPDGPGCKKLESSA----AIPFA 392 LA TE VF+WG G G+LG G +TP I+ LS G G ++E A A+ A Sbjct: 3192 LALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLS--GIGVVQIECGAQFSLALTRA 3249 Query: 391 AKIWV-SPSERYAL--VPDEKVAKP 326 ++W + Y L D+ V KP Sbjct: 3250 GEVWTWGKGDYYRLGHGGDQHVRKP 3274 Score = 37.7 bits (86), Expect = 0.022 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALS 446 LA T + V+AWG G G+LGHG + + P +++ L+ Sbjct: 4149 LALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLN 4186 Score = 37.4 bits (85), Expect = 0.029 Identities = 15/36 (41%), Positives = 23/36 (63%) Frame = -1 Query: 556 AFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 A T +V WG+G G+LGHG+ D+ P +++AL Sbjct: 4202 AITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEAL 4237 Score = 37.0 bits (84), Expect = 0.038 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 LA T VF+WG G G+LGHG + P +++AL Sbjct: 3086 LALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEAL 3122 Score = 34.3 bits (77), Expect = 0.24 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 LA T + VFAWG G G+LG+G P+++++L Sbjct: 735 LALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL 771 Score = 32.7 bits (73), Expect = 0.71 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 LA N ++WG G +LGHG+ R P I AL Sbjct: 629 LAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAAL 665 Score = 31.6 bits (70), Expect = 1.6 Identities = 19/56 (33%), Positives = 28/56 (50%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPDGPGCKKLESSAAIPFA 392 L T+ NV++WG G G+LG G P I++L+ G G K+E + A Sbjct: 4255 LCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLA--GLGVVKVECGSQFSVA 4308 Score = 31.6 bits (70), Expect = 1.6 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = -1 Query: 556 AFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALS 446 A + + ++ WG G G+LGHG+ + P ++ AL+ Sbjct: 3139 AISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALA 3175 Score = 29.6 bits (65), Expect = 6.0 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 +A T+ V+ WG+G +LGHG + P + AL Sbjct: 4307 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL 4343
>RCC2_XENLA (Q52KW8) Protein RCC2 homolog| Length = 513 Score = 38.5 bits (88), Expect = 0.013 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPDGPGCKKLESSAAIPFA 392 L +K VF+WG G G+LGH E D P ++ G G ++ + A FA Sbjct: 334 LILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYAGATCSFA 389 Score = 36.2 bits (82), Expect = 0.064 Identities = 15/37 (40%), Positives = 24/37 (64%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 L T + +++WGR GQLGHG+I + P +I++L Sbjct: 154 LLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESL 190
>ALS2_MOUSE (Q920R0) Alsin (Amyotrophic lateral sclerosis protein 2 homolog)| Length = 1651 Score = 37.7 bits (86), Expect = 0.022 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = -1 Query: 544 KKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPDGPGCKKLESSAA 404 + V+ WG+G GQLGHG+++ R P+ + L DG LE+ + Sbjct: 519 RTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCL--DGKEVIHLEAGGS 563 Score = 34.7 bits (78), Expect = 0.19 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGE 488 LA T K V++WG T GQLGH E Sbjct: 566 LALTAKSQVYSWGSNTFGQLGHSE 589
>RCC2_HUMAN (Q9P258) Protein RCC2 (Telophase disk protein of 60 kDa) (RCC1-like| protein TD-60) Length = 522 Score = 37.4 bits (85), Expect = 0.029 Identities = 18/56 (32%), Positives = 26/56 (46%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPDGPGCKKLESSAAIPFA 392 L +K VF+WG G G+LGH E D P ++ G G ++ + FA Sbjct: 343 LVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFA 398 Score = 35.0 bits (79), Expect = 0.14 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALS 446 L T + +++WGR GQLGHG+ P +I+ LS Sbjct: 163 LLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLS 200
>ALS2_PANTR (Q5BIW4) Alsin (Amyotrophic lateral sclerosis protein 2 homolog)| Length = 1657 Score = 37.4 bits (85), Expect = 0.029 Identities = 17/44 (38%), Positives = 26/44 (59%) Frame = -1 Query: 544 KKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPDGPGCKKLES 413 + V+ WG+G GQLGHG+++ R P+ + L DG LE+ Sbjct: 525 RTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCL--DGKEVIHLEA 566 Score = 33.5 bits (75), Expect = 0.41 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGE 488 LA T K V++WG T GQLGH + Sbjct: 572 LALTAKSQVYSWGSNTFGQLGHSD 595
>ALS2_HUMAN (Q96Q42) Alsin (Amyotrophic lateral sclerosis protein 2)| Length = 1657 Score = 37.4 bits (85), Expect = 0.029 Identities = 17/44 (38%), Positives = 26/44 (59%) Frame = -1 Query: 544 KKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPDGPGCKKLES 413 + V+ WG+G GQLGHG+++ R P+ + L DG LE+ Sbjct: 525 RTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCL--DGKEVIHLEA 566 Score = 33.5 bits (75), Expect = 0.41 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGE 488 LA T K V++WG T GQLGH + Sbjct: 572 LALTAKSQVYSWGSNTFGQLGHSD 595
>HERC2_HUMAN (O95714) HECT domain and RCC1-like domain-containing protein 2| Length = 4834 Score = 37.4 bits (85), Expect = 0.029 Identities = 19/59 (32%), Positives = 28/59 (47%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPDGPGCKKLESSAAIPFAAKI 383 LA V++WG G G+LGHG+ V P +I A S G + + ++A I Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI 566 Score = 36.2 bits (82), Expect = 0.064 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = -1 Query: 556 AFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 A T + ++ WGRG G+LGHG D P+++ L Sbjct: 565 AITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL 600 Score = 34.3 bits (77), Expect = 0.24 Identities = 21/56 (37%), Positives = 29/56 (51%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPDGPGCKKLESSAAIPFA 392 LA T++ VF+WG G G+LG G N P I+ L +G G ++E A A Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL--NGQGVCQIECGAQFSLA 3219 Score = 33.5 bits (75), Expect = 0.41 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = -1 Query: 556 AFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 A T VF+WG G G+LGH ++ + P +I+AL Sbjct: 3061 ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3096 Score = 33.1 bits (74), Expect = 0.54 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = -1 Query: 550 TEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 T +++ WG+G G+LGH + D+ P +++AL Sbjct: 4107 TAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEAL 4140 Score = 32.3 bits (72), Expect = 0.92 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 LA + + V++WG G+LGHG + P +I++L Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4088 Score = 32.3 bits (72), Expect = 0.92 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 LA TE V++WG G G+LG G TP +I+ L Sbjct: 618 LAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654 Score = 32.0 bits (71), Expect = 1.2 Identities = 19/56 (33%), Positives = 28/56 (50%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPDGPGCKKLESSAAIPFA 392 L T+ V++WG G G+LG G P+ ID+L+ G G K+E + A Sbjct: 4158 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVA 4211 Score = 32.0 bits (71), Expect = 1.2 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 LA T+ V+ WG+G +LGHG V P +++ L Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3254 Score = 30.8 bits (68), Expect = 2.7 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 LA T+ V+AWG GQ G+G P ++ L Sbjct: 3270 LAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGL 3306 Score = 30.8 bits (68), Expect = 2.7 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 +A T+ V++WG+G + +LGHG P +++ L Sbjct: 670 IALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL 706 Score = 30.4 bits (67), Expect = 3.5 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = -1 Query: 556 AFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 A T ++ WG G G+LGHG+ + P ++ L Sbjct: 3113 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 3148
>HERC2_MOUSE (Q4U2R1) HECT domain and RCC1-like domain-containing protein 2| Length = 4836 Score = 37.4 bits (85), Expect = 0.029 Identities = 19/59 (32%), Positives = 28/59 (47%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPDGPGCKKLESSAAIPFAAKI 383 LA V++WG G G+LGHG+ V P +I A S G + + ++A I Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI 567 Score = 36.2 bits (82), Expect = 0.064 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = -1 Query: 556 AFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 A T + ++ WGRG G+LGHG D P+++ L Sbjct: 566 AITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL 601 Score = 34.3 bits (77), Expect = 0.24 Identities = 21/56 (37%), Positives = 29/56 (51%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPDGPGCKKLESSAAIPFA 392 LA T++ VF+WG G G+LG G N P I+ L +G G ++E A A Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL--NGQGVCQIECGAQFSLA 3220 Score = 33.1 bits (74), Expect = 0.54 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = -1 Query: 550 TEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 T +++ WG+G G+LGH + D+ P +++AL Sbjct: 4109 TAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEAL 4142 Score = 32.7 bits (73), Expect = 0.71 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = -1 Query: 556 AFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 A T VF+WG G G+LGH ++ + P +I AL Sbjct: 3062 ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQAL 3097 Score = 32.3 bits (72), Expect = 0.92 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 LA + + V++WG G+LGHG + P +I++L Sbjct: 4054 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL 4090 Score = 32.3 bits (72), Expect = 0.92 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 LA TE V++WG G G+LG G TP +I+ L Sbjct: 619 LAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655 Score = 32.0 bits (71), Expect = 1.2 Identities = 19/56 (33%), Positives = 28/56 (50%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPDGPGCKKLESSAAIPFA 392 L T+ V++WG G G+LG G P+ ID+L+ G G K+E + A Sbjct: 4160 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVA 4213 Score = 32.0 bits (71), Expect = 1.2 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 LA T+ V+ WG+G +LGHG V P +++ L Sbjct: 3219 LALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3255 Score = 30.8 bits (68), Expect = 2.7 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 LA T+ V+AWG GQ G+G P ++ L Sbjct: 3271 LAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGL 3307 Score = 30.8 bits (68), Expect = 2.7 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 +A T+ V++WG+G + +LGHG P +++ L Sbjct: 671 IALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL 707
>RCC2_MOUSE (Q8BK67) Protein RCC2| Length = 520 Score = 37.0 bits (84), Expect = 0.038 Identities = 18/56 (32%), Positives = 26/56 (46%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPDGPGCKKLESSAAIPFA 392 L +K VF+WG G G+LGH E D P ++ G G ++ + FA Sbjct: 341 LVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFA 396 Score = 36.6 bits (83), Expect = 0.049 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALS 446 L T + +++WGR GQLGHG+ P +I+ALS Sbjct: 161 LLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALS 198
>MYCB2_MOUSE (Q7TPH6) Probable ubiquitin ligase protein MYCBP2 (EC 6.3.2.-) (Myc| binding protein 2) (Protein associated with Myc) (Pam/highwire/rpm-1 protein) Length = 4711 Score = 35.8 bits (81), Expect = 0.084 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -1 Query: 547 EKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 E +V+ +G G GQLGHG++ R P ++ AL Sbjct: 919 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQAL 951
>RCC2_BRARE (Q6NYE2) Protein RCC2 homolog| Length = 495 Score = 35.8 bits (81), Expect = 0.084 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPDGPGCKKLESSAAIPFA 392 L +K VF+WG G G+LGH E D P ++ G G ++ FA Sbjct: 316 LVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFA 371 Score = 34.7 bits (78), Expect = 0.19 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPD 440 L T + +++WGR GQLGHG+ P +I+ L + Sbjct: 136 LIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEE 175
>MYCB2_HUMAN (O75592) Probable ubiquitin ligase protein MYCBP2 (EC 6.3.2.-) (Myc| binding protein 2) (Protein associated with Myc) (Pam/highwire/rpm-1 protein) Length = 4641 Score = 35.8 bits (81), Expect = 0.084 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -1 Query: 547 EKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 E +V+ +G G GQLGHG++ R P ++ AL Sbjct: 919 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQAL 951
>RCC1_HUMAN (P18754) Regulator of chromosome condensation (Chromosome| condensation protein 1) (Cell cycle regulatory protein) Length = 421 Score = 33.1 bits (74), Expect = 0.54 Identities = 16/31 (51%), Positives = 20/31 (64%) Frame = -1 Query: 556 AFTEKKNVFAWGRGTSGQLGHGEIVDRNTPV 464 A T+ VFAWG GT+ QLG G+ D +PV Sbjct: 359 AVTKDGRVFAWGMGTNYQLGTGQDEDAWSPV 389
>NEK8_HUMAN (Q86SG6) Serine/threonine-protein kinase Nek8 (EC 2.7.11.1) (Never| in mitosis A-related kinase 8) (NimA-related protein kinase 8) (NIMA-related kinase 12a) Length = 692 Score = 33.1 bits (74), Expect = 0.54 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTP 467 LA + ++ +FAWGRG SG+LG G + P Sbjct: 456 LALSTERELFAWGRGDSGRLGLGTRESHSCP 486
>NEK8_BRARE (Q90XC2) Serine/threonine-protein kinase Nek8 (EC 2.7.11.1)| (NimA-related protein kinase 8) Length = 697 Score = 32.7 bits (73), Expect = 0.71 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTP 467 LA T ++ VF+WGRG +G+LG N P Sbjct: 463 LAVTNEREVFSWGRGDNGRLGLATQDSHNCP 493
>HERC5_HUMAN (Q9UII4) HECT domain and RCC1-like domain-containing protein 5| (Cyclin-E-binding protein 1) Length = 1024 Score = 32.7 bits (73), Expect = 0.71 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 +A + N+++WG+ GQLG G ++ P +I+ L Sbjct: 204 MALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGL 240 Score = 29.6 bits (65), Expect = 6.0 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHG-EIVDRNTPVIIDALS 446 LA ++ +FAWG+ GQLG G + TP I++ L+ Sbjct: 151 LALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 189
>DAK_BOVIN (Q58DK4) Dihydroxyacetone kinase (EC 2.7.1.29) (Glycerone kinase)| (DHA kinase) Length = 578 Score = 32.3 bits (72), Expect = 0.92 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Frame = -1 Query: 466 VIIDALSPDGPGCKKLES---SAAIPFAAKIWVSPSERYALVPDEKVAKPGDATARGNGA 296 V + L D P K +++ ++A P AK+WV+ +R P E +A P TA G + Sbjct: 312 VSLTLLLVDEPLLKLIDAETTASAWPNVAKVWVTGRKRSRAAPTEPLAAPDSTTAAGEAS 371 Query: 295 DASV 284 V Sbjct: 372 KQMV 375
>RCBT2_PONPY (Q5RCZ7) RCC1 and BTB domain-containing protein 2 (Regulator of| chromosome condensation and BTB domain-containing protein 2) Length = 551 Score = 32.0 bits (71), Expect = 1.2 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTP 467 L T VFAWG SGQ+G G V++ P Sbjct: 165 LVLTSDGEVFAWGYNNSGQVGSGSTVNQPIP 195 Score = 30.0 bits (66), Expect = 4.6 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRN--TPVIID 455 L T++ V+AWG + GQLG G +++ TPV ++ Sbjct: 270 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306
>RCBT2_HUMAN (O95199) RCC1 and BTB domain-containing protein 2 (Regulator of| chromosome condensation and BTB domain-containing protein 2) (Chromosome condensation 1-like) (CHC1-L) (RCC1-like G exchanging factor) Length = 551 Score = 32.0 bits (71), Expect = 1.2 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTP 467 L T VFAWG SGQ+G G V++ P Sbjct: 165 LVLTSDGEVFAWGYNNSGQVGSGSTVNQPIP 195 Score = 30.0 bits (66), Expect = 4.6 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRN--TPVIID 455 L T++ V+AWG + GQLG G +++ TPV ++ Sbjct: 270 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306
>RCC1_MOUSE (Q8VE37) Regulator of chromosome condensation (Chromosome| condensation protein 1) Length = 421 Score = 31.6 bits (70), Expect = 1.6 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = -1 Query: 556 AFTEKKNVFAWGRGTSGQLGHGEIVDRNTPV 464 A ++ VFAWG GT+ QLG G+ D +PV Sbjct: 359 AVSKDGRVFAWGMGTNYQLGTGQDEDAWSPV 389
>RCC1_MESAU (P23800) Regulator of chromosome condensation (Chromosome| condensation protein 1) Length = 421 Score = 31.6 bits (70), Expect = 1.6 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = -1 Query: 556 AFTEKKNVFAWGRGTSGQLGHGEIVDRNTPV 464 A ++ VFAWG GT+ QLG G+ D +PV Sbjct: 359 AVSKDGRVFAWGMGTNYQLGTGQDEDAWSPV 389
>RCBT2_RAT (Q6P798) RCC1 and BTB domain-containing protein 2 (Regulator of| chromosome condensation and BTB domain-containing protein 2) (Chromosome condensation 1-like) Length = 551 Score = 31.2 bits (69), Expect = 2.1 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 2/37 (5%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRN--TPVIID 455 L T++ ++AWG + GQLG G +++ TPV+++ Sbjct: 270 LVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE 306 Score = 30.4 bits (67), Expect = 3.5 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTP 467 L T VFAWG SGQ+G G ++ P Sbjct: 165 LVLTSDGEVFAWGYNNSGQVGSGSTANQPIP 195
>RCBT2_MOUSE (Q99LJ7) RCC1 and BTB domain-containing protein 2 (Regulator of| chromosome condensation and BTB domain-containing protein 2) (Chromosome condensation 1-like) Length = 551 Score = 31.2 bits (69), Expect = 2.1 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 2/37 (5%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRN--TPVIID 455 L T++ ++AWG + GQLG G +++ TPV+++ Sbjct: 270 LVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE 306 Score = 30.4 bits (67), Expect = 3.5 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTP 467 L T VFAWG SGQ+G G ++ P Sbjct: 165 LVLTSDGEVFAWGYNNSGQVGSGSTANQPIP 195
>ARP4_USTMA (Q4P2E8) Actin-like protein ARP4| Length = 534 Score = 31.2 bits (69), Expect = 2.1 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Frame = -1 Query: 424 KLESSAAIPFAAKIWVSPSERYALVPDEKVAKPGDA--TARGNGADASVPENDVKRMR 257 +LES AA ++ V P+ER V ++ G A T+ GNG A+ E R+R Sbjct: 52 ELESQAAFATSSSSTVEPTERAEPVDGDETMADGQALSTSNGNGGAAATQEASDHRLR 109
>NEK8_MOUSE (Q91ZR4) Serine/threonine-protein kinase Nek8 (EC 2.7.11.1) (Never| in mitosis A-related kinase 8) (NimA-related protein kinase 8) Length = 698 Score = 31.2 bits (69), Expect = 2.1 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTP 467 LA + +FAWGRG G+LG G N P Sbjct: 462 LALSTDGELFAWGRGDGGRLGLGTRESHNCP 492
>RPGR_HUMAN (Q92834) X-linked retinitis pigmentosa GTPase regulator| Length = 1020 Score = 30.8 bits (68), Expect = 2.7 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNT 470 L TE NV+A G GQLG G+ +RNT Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNT 129
>MKL2_HUMAN (Q9ULH7) MKL/myocardin-like protein 2 (Myocardin-related| transcription factor B) (MRTF-B) (Megakaryoblastic leukemia 2) Length = 1088 Score = 30.8 bits (68), Expect = 2.7 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = -1 Query: 457 DALSPDGPGCKKLESSAAIPFAAKIWVSPS 368 DALSPD P ++ + SAA P K+ SPS Sbjct: 182 DALSPDQPASQESQGSAASPSEPKVSESPS 211
>MKL2_MOUSE (P59759) MKL/myocardin-like protein 2 (Myocardin-related| transcription factor B) (MRTF-B) Length = 1080 Score = 30.8 bits (68), Expect = 2.7 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -1 Query: 457 DALSPDGPGCKKLESSAAIPFAAKIWVSPSERYALVP 347 DALSPD P ++ + SAA P K+ SP A P Sbjct: 182 DALSPDQPASQESQGSAASPSEPKVSASPPPVTASTP 218
>SLP1_SCHPO (P78972) WD-repeat-containing protein slp1| Length = 488 Score = 29.3 bits (64), Expect = 7.8 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = -1 Query: 538 NVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPDGPGCKKLESSAAIPFAAKIW 380 N+ W +SG +I +T V+ ALSPDG ++ S+AA K W Sbjct: 415 NLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDG----RILSTAASDENLKFW 463
>RCC1_XENLA (P25183) Regulator of chromosome condensation| Length = 424 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/23 (60%), Positives = 16/23 (69%) Frame = -1 Query: 535 VFAWGRGTSGQLGHGEIVDRNTP 467 VFAWG GT+ QLG GE D +P Sbjct: 371 VFAWGMGTNLQLGTGEEEDVWSP 393
>RCBT1_MOUSE (Q6NXM2) RCC1 and BTB domain-containing protein 1 (Regulator of| chromosome condensation and BTB domain-containing protein 1) Length = 531 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 +A + V+ WG +GQLG G ++ TPV + AL Sbjct: 194 MAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAAL 230
>RCBT1_HUMAN (Q8NDN9) RCC1 and BTB domain-containing protein 1 (Regulator of| chromosome condensation and BTB domain-containing protein 1) (Chronic lymphocytic leukemia deletion region gene 7 protein) (CLL deletion region gene 7 protein) Length = 531 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 449 +A + V+ WG +GQLG G ++ TPV + AL Sbjct: 194 MAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAAL 230 Score = 29.3 bits (64), Expect = 7.8 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = -1 Query: 559 LAFTEKKNVFAWGRGTSGQLGHGEIVDRNTP 467 +A VFAWG GQ+G G ++ TP Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTP 171
>MECR1_CAEEL (O45903) Probable trans-2-enoyl-CoA reductase 1, mitochondrial| precursor (EC 1.3.1.38) Length = 344 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/56 (26%), Positives = 34/56 (60%) Frame = -1 Query: 421 LESSAAIPFAAKIWVSPSERYALVPDEKVAKPGDATARGNGADASVPENDVKRMRV 254 ++++ ++ +AA V+P Y ++ D K GD A+ NGA+++V ++ ++ R+ Sbjct: 127 IDNTLSMEYAATFQVNPPTAYRMLKDFIDLKKGDTVAQ-NGANSAVGKHVIQICRI 181 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,377,171 Number of Sequences: 219361 Number of extensions: 1692768 Number of successful extensions: 3948 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 3706 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3947 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
