>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                               
Query: 580      atgacagtgaaattcgagaaaatgttcatcagagtgtcgagcgcctc 626
                |||| |||||| || |||||||||||||||||| ||||||| |||||
Sbjct: 28946846 atgatagtgaagtttgagaaaatgttcatcagattgtcgagtgcctc 28946892

>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0468G03
          Length = 143918

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 580   atgacagtgaaattcgagaaaatgttcatcagagtgtcgagcgcctc 626
             |||| |||||| || |||||||||||||||||| ||||||| |||||
Sbjct: 96890 atgatagtgaagtttgagaaaatgttcatcagattgtcgagtgcctc 96936

>dbj|AK104088.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-D06, full
            insert sequence
          Length = 1373

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 580  atgacagtgaaattcgagaaaatgttcatcagagtgtcgagcgcctc 626
            |||| |||||| || |||||||||||||||||| ||||||| |||||
Sbjct: 1169 atgatagtgaagtttgagaaaatgttcatcagattgtcgagtgcctc 1123

>dbj|AK072266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006H21, full
            insert sequence
          Length = 1574

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 580  atgacagtgaaattcgagaaaatgttcatcagagtgtcgagcgcctc 626
            |||| |||||| || |||||||||||||||||| ||||||| |||||
Sbjct: 1387 atgatagtgaagtttgagaaaatgttcatcagattgtcgagtgcctc 1341

>gb|AC157213.2| Mus musculus BAC clone RP23-157N5 from chromosome 12, complete sequence
          Length = 211304

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 263    cagaaaagaacggagcacttct 284
              ||||||||||||||||||||||
Sbjct: 126441 cagaaaagaacggagcacttct 126420

>gb|AF056881.1|AF056881 Hepatitis C virus 68_CL11 genome polyprotein gene, partial cds
          Length = 352

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 343 gcgctgttctacaccagcaaa 363
           |||||||||||||||||||||
Sbjct: 222 gcgctgttctacaccagcaaa 242

>gb|AC122257.4| Mus musculus BAC clone RP23-178I11 from 17, complete sequence
          Length = 222314

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 252    ggcatgaatttcagaaaaga 271
              ||||||||||||||||||||
Sbjct: 150240 ggcatgaatttcagaaaaga 150221

>gb|AC122423.2| Mus musculus BAC clone RP24-171N18 from 7, complete sequence
          Length = 141166

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   tgcttcagagatcagcaggc 434
             ||||||||||||||||||||
Sbjct: 34548 tgcttcagagatcagcaggc 34529

>ref|XM_662498.1| Cryptosporidium hominis TU502 DEAD/DEAH box RNA helicase (Chro.60555)
            partial mRNA
          Length = 1632

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    aactgcagaaacatcttgta 22
            ||||||||||||||||||||
Sbjct: 1041 aactgcagaaacatcttgta 1022

>gb|AC090469.9| Homo sapiens chromosome 11, clone RP11-734J23, complete sequence
          Length = 215308

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    cccctcaaatccacaaatat 69
             ||||||||||||||||||||
Sbjct: 50108 cccctcaaatccacaaatat 50089

>gb|AC164158.3| Mus musculus BAC clone RP24-263G24 from chromosome 7, complete sequence
          Length = 200983

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   tgcttcagagatcagcaggc 434
             ||||||||||||||||||||
Sbjct: 18583 tgcttcagagatcagcaggc 18564

>emb|AL021877.1|HS101G11 Human DNA sequence from clone RP1-101G11 on chromosome 22q12, complete
             sequence
          Length = 150236

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    tatcagtttattcatatata 110
             ||||||||||||||||||||
Sbjct: 30351 tatcagtttattcatatata 30370

>emb|BX538353.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 4/4
          Length = 277703

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      aactgcagaaacatcttgta 22
              ||||||||||||||||||||
Sbjct: 115497 aactgcagaaacatcttgta 115478

>gb|AC105902.2| Homo sapiens chromosome 3 clone RP11-578F5, complete sequence
          Length = 163115

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 598    aaaatgttcatcagagtgtc 617
              ||||||||||||||||||||
Sbjct: 151893 aaaatgttcatcagagtgtc 151912

>gb|AC010170.3| Homo sapiens 3p22-21.3 BAC RPCI11-487J21 (Roswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 173977

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 598   aaaatgttcatcagagtgtc 617
             ||||||||||||||||||||
Sbjct: 38843 aaaatgttcatcagagtgtc 38862

>emb|BX323027.8| Zebrafish DNA sequence from clone CH211-242D13, complete sequence
          Length = 139257

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 195   tggctcatttcagatgtccccaat 218
             |||| |||||||||||||||||||
Sbjct: 55419 tggcacatttcagatgtccccaat 55442

>ref|XM_627810.1| Cryptosporidium parvum Iowa II Drs1p (cgd6_4830), partial mRNA
          Length = 1722

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    aactgcagaaacatcttgta 22
            ||||||||||||||||||||
Sbjct: 1131 aactgcagaaacatcttgta 1112

>gb|AC160147.6| Mus musculus 10 BAC RP24-576A6 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 145198

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    ttcacatagatcttgcaaac 90
             ||||||||||||||||||||
Sbjct: 43316 ttcacatagatcttgcaaac 43335

>emb|BX255898.9| Zebrafish DNA sequence from clone CH211-248J19, complete sequence
          Length = 181912

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 195    tggctcatttcagatgtccccaat 218
              |||| |||||||||||||||||||
Sbjct: 100751 tggcacatttcagatgtccccaat 100728

>ref|NM_205034.1| Gallus gallus L-type voltage-gated calcium channel alpha1D subunit
            ChCaChA1D (LOC395895), mRNA
          Length = 8737

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 386  actaaaatagcctagccatc 405
            ||||||||||||||||||||
Sbjct: 4143 actaaaatagcctagccatc 4124

>gb|AE000783.1| Borrelia burgdorferi B31, complete genome
          Length = 910724

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 582    gacagtgaaattcgagaaaa 601
              ||||||||||||||||||||
Sbjct: 226930 gacagtgaaattcgagaaaa 226911

>emb|CT571254.7| Mouse DNA sequence from clone RP23-335F6 on chromosome 12, complete
             sequence
          Length = 189879

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    cttgcaaactatcagtttattcat 105
             |||||||| |||||||||||||||
Sbjct: 98729 cttgcaaattatcagtttattcat 98706

>emb|AL591417.9| Mouse DNA sequence from clone RP23-272C1 on chromosome 11, complete
              sequence
          Length = 131385

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 84     tgcaaactatcagtttattcatat 107
              |||||||||||| |||||||||||
Sbjct: 129656 tgcaaactatcattttattcatat 129679

>gb|AF027602.1|AF027602 Gallus gallus L-type voltage-gated calcium channel alpha1D subunit
            ChCaChA1D mRNA, complete cds
          Length = 8737

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 386  actaaaatagcctagccatc 405
            ||||||||||||||||||||
Sbjct: 4143 actaaaatagcctagccatc 4124

>gb|AC107768.25| Mus musculus chromosome 18, clone RP23-144B22, complete sequence
          Length = 217847

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     atccacaaatatgttcacat 77
              ||||||||||||||||||||
Sbjct: 168238 atccacaaatatgttcacat 168219

>emb|AL049652.28|HSJ1169J3 Human DNA sequence from clone RP5-1169J3 on chromosome 11p13, complete
             sequence
          Length = 139512

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    cccctcaaatccacaaatat 69
             ||||||||||||||||||||
Sbjct: 42507 cccctcaaatccacaaatat 42488

>emb|AL669959.22| Mouse DNA sequence from clone RP23-221H6 on chromosome 4, complete
              sequence
          Length = 213801

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     ttcacatagatcttgcaaac 90
              ||||||||||||||||||||
Sbjct: 132541 ttcacatagatcttgcaaac 132522

>emb|AL591165.17| Mouse DNA sequence from clone RP23-336D20 on chromosome 11, complete
              sequence
          Length = 123050

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 84     tgcaaactatcagtttattcatat 107
              |||||||||||| |||||||||||
Sbjct: 122780 tgcaaactatcattttattcatat 122757


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,255,171
Number of Sequences: 3902068
Number of extensions: 5255171
Number of successful extensions: 90346
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90271
Number of HSP's gapped (non-prelim): 75
length of query: 626
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 603
effective length of database: 17,143,297,704
effective search space: 10337408515512
effective search space used: 10337408515512
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)