ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6e08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187397.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
3dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
4dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
5dbj|AK120864.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
6gb|AC122326.4| Mus musculus BAC clone RP23-337J18 from chromosom... 44 0.57
7gb|AC117081.2| Dictyostelium discoideum chromosome 2 map 5862124... 44 0.57
8gb|AC162939.6| Mus musculus BAC clone RP23-97G12 from chromosome... 44 0.57
9gb|AC121899.3| Mus musculus BAC clone RP24-166J12 from chromosom... 42 2.2
10gb|AC124523.5| Mus musculus BAC clone RP23-399P19 from chromosom... 42 2.2
11emb|AL714001.13| Human DNA sequence from clone RP11-763I5 on chr... 42 2.2
12dbj|AP006298.1| Homo sapiens genomic DNA, chromosome 9 clone:RP1... 42 2.2
13gb|AC152822.2| Mus musculus BAC clone RP24-319O19 from 6, comple... 42 2.2
14emb|AL807384.5| Mouse DNA sequence from clone RP23-18F9 on chrom... 42 2.2
15dbj|AB020870.1| Homo sapiens genomic DNA of 9q32 anti-oncogene o... 42 2.2
16gb|AY269475.1| Deropegus sp. 'aspina'-A-2003 NADH dehydrogenase ... 40 8.8
17emb|BX248397.8| Zebrafish DNA sequence from clone CH211-233H19 i... 40 8.8
18gb|BC063678.1| Homo sapiens cDNA clone IMAGE:4363166, partial cds 40 8.8
19gb|AC121783.2| Mus musculus BAC clone RP23-370I9 from 18, comple... 40 8.8
20gb|AC004875.2| Homo sapiens PAC clone RP4-745K6 from 7, complete... 40 8.8
21emb|AL390065.20| Human DNA sequence from clone RP11-520M5 on chr... 40 8.8
22emb|AL117341.26|HSBA512N4 Human DNA sequence from clone RP11-512... 40 8.8
23emb|BX511257.16| Zebrafish DNA sequence from clone DKEY-280E21 i... 40 8.8
24gb|AC009318.11| Homo sapiens 12p BAC RP11-996F15 (Roswell Park C... 40 8.8
25gb|AC119739.5| Homo sapiens 3 BAC RP11-676G20 (Roswell Park Canc... 40 8.8
26gb|AC115990.5| Homo sapiens chromosome 11, clone CTC-830E23, com... 40 8.8
27gb|AC012615.4| Homo sapiens chromosome 19 clone CTB-31O20, compl... 40 8.8
28emb|CR626911.1| Human DNA sequence from clone XX-NCIH2171_16G22,... 40 8.8
29dbj|AK055721.1| Homo sapiens cDNA FLJ31159 fis, clone KIDNE1000012 40 8.8
30gb|AC080183.7| Homo sapiens chromosome , clone RP11-1O24, comple... 40 8.8
31gb|AC069547.7| Homo sapiens chromosome 10 clone RP11-521C22, com... 40 8.8
32gb|AC012337.8| Homo sapiens chromosome , clone RP11-119O22, comp... 40 8.8
33ref|XM_691352.1| PREDICTED: Danio rerio similar to Sal-like prot... 40 8.8
34gb|AC151535.2| Mus musculus BAC clone RP23-213M8 from chromosome... 40 8.8
35gb|AC149135.2| Medicago truncatula chromosome 2 BAC clone mth2-3... 40 8.8
36gb|AC023869.5|AC023869 Homo sapiens chromosome 11, clone RP11-43... 40 8.8
37gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 40 8.8
38emb|BX465202.4| Zebrafish DNA sequence from clone CH211-191G24 i... 40 8.8
39gb|AC108069.2| Homo sapiens BAC clone RP11-620F4 from 2, complet... 40 8.8
40gb|AC019097.5| Homo sapiens BAC clone RP11-425I16 from 2, comple... 40 8.8
41gb|AC009362.8|AC009362 Homo sapiens chromosome 7 clone RP11-256C... 40 8.8
42gb|BC039732.1| Homo sapiens, clone IMAGE:5770079, mRNA 40 8.8
43gb|AC013434.8|AC013434 Homo sapiens chromosome 7 clone RP11-192D... 40 8.8
44emb|AL928674.5| Zebrafish DNA sequence from clone CH211-10E2, co... 40 8.8
45emb|AL355103.3|CNS05TCM Human chromosome 14 DNA sequence BAC R-6... 40 8.8
46gb|AC151531.3| Mus musculus BAC clone RP24-387D22 from chromosom... 40 8.8
47emb|Z69366.1|HSL96F8B Human DNA sequence from clone LA04NC01-96F... 40 8.8
48gb|AC166160.3| Mus musculus BAC clone RP24-86O19 from chromosome... 40 8.8
49gb|M29083.1|RATTKG1 Rat T-kininogen (T-KG) gene, exon 1 40 8.8
50gb|M16454.1|RATMAP1A Rat MAP-1 gene encoding major acute phase a... 40 8.8
51gb|M16455.1|RATKININO Rat kininogen gene, exon 1 40 8.8 
>ref|NM_187397.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1515

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 180 gttgccgagctaactgcacaaaatctgggtggctgacaacatcacgttgaccagcatgta 239
           ||||||||||| || ||| || ||||||||||| ||  |||||||| ||| |||||||||
Sbjct: 126 gttgccgagctgaccgcagaagatctgggtggcggaggacatcacgatgatcagcatgta 67

             
Query: 240 ca 241
           ||
Sbjct: 66  ca 65
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                            
Query: 180      gttgccgagctaactgcacaaaatctgggtggctgacaacatcacgttgaccagcatgta 239
                ||||||||||| || ||| || ||||||||||| ||  |||||||| ||| |||||||||
Sbjct: 19858129 gttgccgagctgaccgcagaagatctgggtggcggaggacatcacgatgatcagcatgta 19858070

                  
Query: 240      ca 241
                ||
Sbjct: 19858069 ca 19858068
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>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0036M16
          Length = 158880

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                         
Query: 180   gttgccgagctaactgcacaaaatctgggtggctgacaacatcacgttgaccagcatgta 239
             ||||||||||| || ||| || ||||||||||| ||  |||||||| ||| |||||||||
Sbjct: 22779 gttgccgagctgaccgcagaagatctgggtggcggaggacatcacgatgatcagcatgta 22720

               
Query: 240   ca 241
             ||
Sbjct: 22719 ca 22718
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>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0650C03
          Length = 144337

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                         
Query: 180   gttgccgagctaactgcacaaaatctgggtggctgacaacatcacgttgaccagcatgta 239
             ||||||||||| || ||| || ||||||||||| ||  |||||||| ||| |||||||||
Sbjct: 98288 gttgccgagctgaccgcagaagatctgggtggcggaggacatcacgatgatcagcatgta 98229

               
Query: 240   ca 241
             ||
Sbjct: 98228 ca 98227
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>dbj|AK120864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025C14, full
           insert sequence
          Length = 1864

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 180 gttgccgagctaactgcacaaaatctgggtggctgacaacatcacgttgaccagcatgta 239
           ||||||||||| || ||| || ||||||||||| ||  |||||||| ||| |||||||||
Sbjct: 349 gttgccgagctgaccgcagaagatctgggtggcggaggacatcacgatgatcagcatgta 290

             
Query: 240 ca 241
           ||
Sbjct: 289 ca 288
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>gb|AC122326.4| Mus musculus BAC clone RP23-337J18 from chromosome 10, complete sequence
          Length = 236165

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 498    cagaccacatccatcaccaatt 519
              ||||||||||||||||||||||
Sbjct: 197230 cagaccacatccatcaccaatt 197209
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>gb|AC117081.2| Dictyostelium discoideum chromosome 2 map 5862124-6045772 strain AX4,
             complete sequence
          Length = 183648

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 68    atatatgcatctatgattgtgtatat 93
             |||||||||| |||||||||||||||
Sbjct: 36395 atatatgcatgtatgattgtgtatat 36370
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>gb|AC162939.6| Mus musculus BAC clone RP23-97G12 from chromosome 10, complete sequence
          Length = 247228

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 498    cagaccacatccatcaccaatt 519
              ||||||||||||||||||||||
Sbjct: 179901 cagaccacatccatcaccaatt 179922
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>gb|AC121899.3| Mus musculus BAC clone RP24-166J12 from chromosome 6, complete sequence
          Length = 129975

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 401   ttcctttccttggatgagcct 421
             |||||||||||||||||||||
Sbjct: 63020 ttcctttccttggatgagcct 63040
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>gb|AC124523.5| Mus musculus BAC clone RP23-399P19 from chromosome 6, complete sequence
          Length = 188084

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 401    ttcctttccttggatgagcct 421
              |||||||||||||||||||||
Sbjct: 143991 ttcctttccttggatgagcct 144011
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>emb|AL714001.13| Human DNA sequence from clone RP11-763I5 on chromosome 9 Contains the
             3' end of the gene for deleted in esophageal cancer 1
             (DEC1), complete sequence
          Length = 141898

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 463   acaatccagtaaaccttgaga 483
             |||||||||||||||||||||
Sbjct: 67210 acaatccagtaaaccttgaga 67190
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>dbj|AP006298.1| Homo sapiens genomic DNA, chromosome 9 clone:RP11-1334B12, complete
             sequence
          Length = 83701

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 463   acaatccagtaaaccttgaga 483
             |||||||||||||||||||||
Sbjct: 37619 acaatccagtaaaccttgaga 37599
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>gb|AC152822.2| Mus musculus BAC clone RP24-319O19 from 6, complete sequence
          Length = 184667

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 401  ttcctttccttggatgagcct 421
            |||||||||||||||||||||
Sbjct: 3945 ttcctttccttggatgagcct 3965
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>emb|AL807384.5| Mouse DNA sequence from clone RP23-18F9 on chromosome 2, complete
             sequence
          Length = 218815

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 327   tctgatcctcccataatgtaa 347
             |||||||||||||||||||||
Sbjct: 64583 tctgatcctcccataatgtaa 64603
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>dbj|AB020870.1| Homo sapiens genomic DNA of 9q32 anti-oncogene of flat epitherium
             cancer , segment 2/10
          Length = 100000

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 463   acaatccagtaaaccttgaga 483
             |||||||||||||||||||||
Sbjct: 69437 acaatccagtaaaccttgaga 69457
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>gb|AY269475.1| Deropegus sp. 'aspina'-A-2003 NADH dehydrogenase subunit 1 (ND1)
           gene, partial cds; mitochondrial gene for mitochondrial
           product
          Length = 636

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 538 ttctgtgtcaacagcaactt 557
           ||||||||||||||||||||
Sbjct: 612 ttctgtgtcaacagcaactt 631
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>emb|BX248397.8| Zebrafish DNA sequence from clone CH211-233H19 in linkage group 18,
             complete sequence
          Length = 160938

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    gcatctatgattgtgtatat 93
             ||||||||||||||||||||
Sbjct: 71731 gcatctatgattgtgtatat 71712
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>gb|BC063678.1| Homo sapiens cDNA clone IMAGE:4363166, partial cds
          Length = 2193

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 87   tgtatatctaatattatata 106
            ||||||||||||||||||||
Sbjct: 1555 tgtatatctaatattatata 1536
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>gb|AC121783.2| Mus musculus BAC clone RP23-370I9 from 18, complete sequence
          Length = 184366

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 515   caattgagagactaaaacta 534
             ||||||||||||||||||||
Sbjct: 25303 caattgagagactaaaacta 25284
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>gb|AC004875.2| Homo sapiens PAC clone RP4-745K6 from 7, complete sequence
          Length = 130607

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    ttgtcatcatatcttccttt 407
              ||||||||||||||||||||
Sbjct: 117552 ttgtcatcatatcttccttt 117571
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>emb|AL390065.20| Human DNA sequence from clone RP11-520M5 on chromosome 4, complete
              sequence
          Length = 157119

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     tgtatatctaatattatata 106
              ||||||||||||||||||||
Sbjct: 106649 tgtatatctaatattatata 106668
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>emb|AL117341.26|HSBA512N4 Human DNA sequence from clone RP11-512N4 on chromosome 10 Contains part
             of the gene for MOB protein, two novel genes and a CpG
             island, complete sequence
          Length = 181300

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 313   agctagccaatgaatctgatcctc 336
             |||||||||||||||||| |||||
Sbjct: 23842 agctagccaatgaatctgttcctc 23819
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>emb|BX511257.16| Zebrafish DNA sequence from clone DKEY-280E21 in linkage group 14,
              complete sequence
          Length = 166973

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     tgtatatctaatattatata 106
              ||||||||||||||||||||
Sbjct: 157291 tgtatatctaatattatata 157310
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>gb|AC009318.11| Homo sapiens 12p BAC RP11-996F15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 203417

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 339   ataatgtaactcatcaagtgtttg 362
             ||||| ||||||||||||||||||
Sbjct: 21098 ataatataactcatcaagtgtttg 21121
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>gb|AC119739.5| Homo sapiens 3 BAC RP11-676G20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 29158

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 389   tgtcatcatatcttcctttccttg 412
             ||||||||||||||||||| ||||
Sbjct: 10192 tgtcatcatatcttcctttacttg 10215
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>gb|AC115990.5| Homo sapiens chromosome 11, clone CTC-830E23, complete sequence
          Length = 160860

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    atatctaatattatatacta 109
             ||||||||||||||||||||
Sbjct: 43131 atatctaatattatatacta 43150
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>gb|AC012615.4| Homo sapiens chromosome 19 clone CTB-31O20, complete sequence
          Length = 149252

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 247  aggctggcatggccagaggc 266
            ||||||||||||||||||||
Sbjct: 3461 aggctggcatggccagaggc 3442
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>emb|CR626911.1| Human DNA sequence from clone XX-NCIH2171_16G22, complete sequence
          Length = 121094

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 339 ataatgtaactcatcaagtgtttg 362
           ||||| ||||||||||||||||||
Sbjct: 240 ataatataactcatcaagtgtttg 263
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>dbj|AK055721.1| Homo sapiens cDNA FLJ31159 fis, clone KIDNE1000012
          Length = 1650

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 87   tgtatatctaatattatata 106
            ||||||||||||||||||||
Sbjct: 1647 tgtatatctaatattatata 1628
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>gb|AC080183.7| Homo sapiens chromosome , clone RP11-1O24, complete sequence
          Length = 164647

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     atatctaatattatatacta 109
              ||||||||||||||||||||
Sbjct: 139631 atatctaatattatatacta 139650
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>gb|AC069547.7| Homo sapiens chromosome 10 clone RP11-521C22, complete sequence
          Length = 189144

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 313    agctagccaatgaatctgatcctc 336
              |||||||||||||||||| |||||
Sbjct: 149822 agctagccaatgaatctgttcctc 149799
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>gb|AC012337.8| Homo sapiens chromosome , clone RP11-119O22, complete sequence
          Length = 171695

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 236   tgtacagcatcaggctggcatggc 259
             ||||||||||||||||| ||||||
Sbjct: 40539 tgtacagcatcaggctgacatggc 40562
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>ref|XM_691352.1| PREDICTED: Danio rerio similar to Sal-like protein 2 (Zinc finger
           protein SALL2) (HSal2) (LOC568044), mRNA
          Length = 5092

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 512 caccaattgagagactaaaa 531
           ||||||||||||||||||||
Sbjct: 515 caccaattgagagactaaaa 534
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>gb|AC151535.2| Mus musculus BAC clone RP23-213M8 from chromosome 7, complete
            sequence
          Length = 216527

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 196  cacaaaatctgggtggctga 215
            ||||||||||||||||||||
Sbjct: 3229 cacaaaatctgggtggctga 3248
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>gb|AC149135.2| Medicago truncatula chromosome 2 BAC clone mth2-31g23, complete
             sequence
          Length = 113812

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 110   tggaagtgcatcaggcgtagatga 133
             ||||||| ||||||||||||||||
Sbjct: 24797 tggaagtccatcaggcgtagatga 24820
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>gb|AC023869.5|AC023869 Homo sapiens chromosome 11, clone RP11-436B24, complete sequence
          Length = 181765

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 90   atatctaatattatatacta 109
            ||||||||||||||||||||
Sbjct: 4989 atatctaatattatatacta 4970
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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 94      ctaatattatatactatggaagtg 117
               ||||| ||||||||||||||||||
Sbjct: 2046527 ctaattttatatactatggaagtg 2046550
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>emb|BX465202.4| Zebrafish DNA sequence from clone CH211-191G24 in linkage group 2,
             complete sequence
          Length = 170771

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 512   caccaattgagagactaaaa 531
             ||||||||||||||||||||
Sbjct: 97888 caccaattgagagactaaaa 97869
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>gb|AC108069.2| Homo sapiens BAC clone RP11-620F4 from 2, complete sequence
          Length = 52970

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 552  caacttagagattgaaggttccttatctcttttatt 587
            ||||||||| |||| ||||  |||||||||||||||
Sbjct: 8316 caacttagaaattgcaggtgtcttatctcttttatt 8351
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>gb|AC019097.5| Homo sapiens BAC clone RP11-425I16 from 2, complete sequence
          Length = 186023

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   ttgtcatcatatcttccttt 407
             ||||||||||||||||||||
Sbjct: 86005 ttgtcatcatatcttccttt 86024
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>gb|AC009362.8|AC009362 Homo sapiens chromosome 7 clone RP11-256C6, complete sequence
          Length = 160156

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 447    aaatgactttctatgtacaa 466
              ||||||||||||||||||||
Sbjct: 156018 aaatgactttctatgtacaa 155999
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>gb|BC039732.1| Homo sapiens, clone IMAGE:5770079, mRNA
          Length = 2129

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 87   tgtatatctaatattatata 106
            ||||||||||||||||||||
Sbjct: 1841 tgtatatctaatattatata 1822
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>gb|AC013434.8|AC013434 Homo sapiens chromosome 7 clone RP11-192D18, complete sequence
          Length = 149103

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 447  aaatgactttctatgtacaa 466
            ||||||||||||||||||||
Sbjct: 5199 aaatgactttctatgtacaa 5180
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>emb|AL928674.5| Zebrafish DNA sequence from clone CH211-10E2, complete sequence
          Length = 205118

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 512    caccaattgagagactaaaa 531
              ||||||||||||||||||||
Sbjct: 134519 caccaattgagagactaaaa 134500
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>emb|AL355103.3|CNS05TCM Human chromosome 14 DNA sequence BAC R-624J12 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 173389

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 83    attgtgtatatctaatattatata 106
             ||||||||||| ||||||||||||
Sbjct: 53060 attgtgtatatataatattatata 53083
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>gb|AC151531.3| Mus musculus BAC clone RP24-387D22 from chromosome 7, complete sequence
          Length = 213801

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 196    cacaaaatctgggtggctga 215
              ||||||||||||||||||||
Sbjct: 109521 cacaaaatctgggtggctga 109540
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>emb|Z69366.1|HSL96F8B Human DNA sequence from clone LA04NC01-96F8 on chromosome 4, complete
            sequence
          Length = 4990

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 87   tgtatatctaatattatata 106
            ||||||||||||||||||||
Sbjct: 4074 tgtatatctaatattatata 4093
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>gb|AC166160.3| Mus musculus BAC clone RP24-86O19 from chromosome 7, complete sequence
          Length = 221792

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 196    cacaaaatctgggtggctga 215
              ||||||||||||||||||||
Sbjct: 219487 cacaaaatctgggtggctga 219506
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>gb|M29083.1|RATTKG1 Rat T-kininogen (T-KG) gene, exon 1
          Length = 1903

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 247  aggctggcatggccagaggc 266
            ||||||||||||||||||||
Sbjct: 1020 aggctggcatggccagaggc 1039
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>gb|M16454.1|RATMAP1A Rat MAP-1 gene encoding major acute phase alpha-1-protein
           (thiostatin), exon 1
          Length = 1402

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 247 aggctggcatggccagaggc 266
           ||||||||||||||||||||
Sbjct: 498 aggctggcatggccagaggc 517
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>gb|M16455.1|RATKININO Rat kininogen gene, exon 1
          Length = 1404

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 247 aggctggcatggccagaggc 266
           ||||||||||||||||||||
Sbjct: 500 aggctggcatggccagaggc 519


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,536,112
Number of Sequences: 3902068
Number of extensions: 5536112
Number of successful extensions: 100823
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100677
Number of HSP's gapped (non-prelim): 146
length of query: 648
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 625
effective length of database: 17,143,297,704
effective search space: 10714561065000
effective search space used: 10714561065000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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