ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags6e06 |
|---|---|
| Clone Library Name | barley_pub |
>DAPF2_ANASP (Q8YVD0) Diaminopimelate epimerase 2 (EC 5.1.1.7) (DAP epimerase 2)| Length = 279 Score = 145 bits (367), Expect = 9e-35 Identities = 71/132 (53%), Positives = 83/132 (62%) Frame = -3 Query: 689 TWHATCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRS 510 TW TCVSMGNPHC+TF V V + L IGPKFEHH FP RTNTEF+QV+SR Sbjct: 154 TWEVTCVSMGNPHCITF------VEDVAAIPLEIIGPKFEHHPAFPQRTNTEFIQVVSRD 207 Query: 509 HLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYM 330 +LKMRVWER VL GR++R V+LPGGPLEIEW E + +YM Sbjct: 208 YLKMRVWERGAGITLACGTGACASLVAAVLTGRSDRLATVELPGGPLEIEWSEVDQRIYM 267 Query: 329 TGPAEAVFYGSI 294 TGPA+ VF G + Sbjct: 268 TGPADRVFTGKL 279
>DAPF_SYNY3 (P74667) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 279 Score = 139 bits (351), Expect = 6e-33 Identities = 69/130 (53%), Positives = 79/130 (60%) Frame = -3 Query: 689 TWHATCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRS 510 TW TCVSMGNPHC+TF V V L L++IGP FEHH F RTNTEF+QVL Sbjct: 152 TWAVTCVSMGNPHCLTF------VDDVDSLNLTEIGPLFEHHPQFSQRTNTEFIQVLGSD 205 Query: 509 HLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYM 330 LKMRVWER VL GR +R+C V+LPGG LEIEW +N +YM Sbjct: 206 RLKMRVWERGAGITLACGTGACATVVAAVLTGRGDRRCTVELPGGNLEIEWSAQDNRLYM 265 Query: 329 TGPAEAVFYG 300 TGPA+ VF G Sbjct: 266 TGPAQRVFSG 275
>DAPF_SYNEL (Q8DGM2) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 286 Score = 120 bits (301), Expect = 4e-27 Identities = 65/136 (47%), Positives = 77/136 (56%), Gaps = 5/136 (3%) Frame = -3 Query: 686 WHATCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSH 507 W TCVSMGNPHCVTF V V L L+ +GP+FEHH FP RTNTEFVQVL Sbjct: 156 WLVTCVSMGNPHCVTF------VEDVAALDLAVLGPQFEHHPAFPQRTNTEFVQVLGSDR 209 Query: 506 LKMRVWERXXXXXXXXXXXXXXXXXXXVL-----EGRAERKCIVDLPGGPLEIEWREDNN 342 L+MRVWER VL G + + V+LPGG L+I W + Sbjct: 210 LRMRVWERGAGMTLACGTGACATLVAAVLTGCLSPGGDQAQATVELPGGDLQIRWDLPSQ 269 Query: 341 HVYMTGPAEAVFYGSI 294 H+YMTGPA AVF G++ Sbjct: 270 HLYMTGPALAVFSGTL 285
>DAPF_BACTN (Q8AAB7) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 267 Score = 106 bits (264), Expect = 8e-23 Identities = 53/131 (40%), Positives = 72/131 (54%) Frame = -3 Query: 686 WHATCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSH 507 + +T VSMGNPH VTF V + + L +IGP+ E++ +FP RTN EF Q++ + Sbjct: 141 FQSTRVSMGNPHLVTF------VEDITQINLPEIGPQLENYHLFPDRTNVEFAQIVGKDT 194 Query: 506 LKMRVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMT 327 ++MRVWER VL G A RKC + + GG + IEW E H+ MT Sbjct: 195 IRMRVWERGSGITQACGTGACATAVAAVLHGLAGRKCDIIMDGGTVTIEWEEATGHILMT 254 Query: 326 GPAEAVFYGSI 294 GPA VF G + Sbjct: 255 GPATKVFDGEM 265
>DAPF_PSEFL (O05322) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 276 Score = 96.7 bits (239), Expect = 6e-20 Identities = 49/133 (36%), Positives = 66/133 (49%) Frame = -3 Query: 692 STWHATCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSR 513 +T VSMGNPH V L+V + + ++GPK EHH FPAR N F+QV+ R Sbjct: 148 ATVELAAVSMGNPHAV------LRVADINSAPVHELGPKIEHHPRFPARVNVGFLQVIDR 201 Query: 512 SHLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVY 333 ++RVWER + +G + ++DLPGG L IEW V Sbjct: 202 HRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPLLIDLPGGRLSIEWAGPGQPVM 261 Query: 332 MTGPAEAVFYGSI 294 MTGPA V+ G + Sbjct: 262 MTGPAVRVYEGQV 274
>DAPF_LEPIC (Q72W63) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 281 Score = 93.6 bits (231), Expect = 5e-19 Identities = 50/128 (39%), Positives = 62/128 (48%) Frame = -3 Query: 677 TCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKM 498 T VSMGNPHCV F V + + IGP E H +FP R N EFV + + HL Sbjct: 159 TAVSMGNPHCVIF------VDDSDEFPVRGIGPLIERHSIFPKRVNVEFVTIRGKDHLYQ 212 Query: 497 RVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPA 318 R WER L GR+ + +DL GG L I+W+E N + MTGPA Sbjct: 213 RTWERGAGETLACGTGACAVMVAGNLTGRSGKDVQIDLRGGTLRIQWQESGN-ILMTGPA 271 Query: 317 EAVFYGSI 294 +F G I Sbjct: 272 REIFSGEI 279
>DAPF_PSESM (Q88B09) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 276 Score = 93.2 bits (230), Expect = 7e-19 Identities = 48/132 (36%), Positives = 65/132 (49%) Frame = -3 Query: 689 TWHATCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRS 510 T VSMGNPH V L+V + + + +GPK EHH FPAR N F+ V+ R Sbjct: 149 TVELAAVSMGNPHAV------LRVDDINNAPVHTLGPKIEHHPRFPARVNVGFLHVVDRQ 202 Query: 509 HLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYM 330 ++RVWER + +G + ++DLPGG L IEW + V M Sbjct: 203 RAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPLLIDLPGGRLSIEWAGPGHPVMM 262 Query: 329 TGPAEAVFYGSI 294 TGPA V+ G + Sbjct: 263 TGPATRVYEGQV 274
>DAPF_RHIME (Q92L46) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 301 Score = 92.8 bits (229), Expect = 9e-19 Identities = 46/125 (36%), Positives = 64/125 (51%) Frame = -3 Query: 668 SMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVW 489 SMGNPH + + + V +L GP E+H +FP R N ++ SR + +R W Sbjct: 160 SMGNPHAIFWVEND-----VWSYELDRFGPLLENHPIFPERANISIARIRSRQEMDLRTW 214 Query: 488 ERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAV 309 ER GR ER V++PGGPL+IEWRE ++HV MTGPAE Sbjct: 215 ERGAGLTLACGSAACAAAVNGARTGRTERMVTVNVPGGPLKIEWRERDDHVIMTGPAEWE 274 Query: 308 FYGSI 294 + G++ Sbjct: 275 WSGTV 279
>DAPF_PASMU (P57962) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 90.9 bits (224), Expect = 3e-18 Identities = 51/129 (39%), Positives = 69/129 (53%), Gaps = 3/129 (2%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDI---GPKFEHHEMFPARTNTEFVQVLSRSHLK 501 VSMGNPHCV +QV D++ +++ GP E+HE FP R N F+QV+ R H+K Sbjct: 153 VSMGNPHCV---------VQVDDIQTANVEQLGPLLENHERFPERVNAGFMQVIHRGHIK 203 Query: 500 MRVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGP 321 +RV+ER V++G + K VDLPGG L IEW ++MTG Sbjct: 204 LRVYERGAGETQACGSGACAAVAVGVMQGLLDSKVQVDLPGGSLIIEWEGVGKPLFMTGD 263 Query: 320 AEAVFYGSI 294 A V+ G I Sbjct: 264 ATHVYDGVI 272
>DAPF_LEPIN (Q8F9V5) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 281 Score = 90.5 bits (223), Expect = 4e-18 Identities = 49/128 (38%), Positives = 61/128 (47%) Frame = -3 Query: 677 TCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKM 498 T VSMGNPHCV F V + + IGP E H +FP R N EFV + + HL Sbjct: 159 TAVSMGNPHCVIF------VDDSDEFPVRGIGPLIERHSIFPKRVNVEFVTIRGKDHLYQ 212 Query: 497 RVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPA 318 R WER L R+ + +DL GG L I+W+E N + MTGPA Sbjct: 213 RTWERGAGETLACGTGACAVMVAGNLTRRSGKDVQIDLRGGTLRIQWQESGN-ILMTGPA 271 Query: 317 EAVFYGSI 294 +F G I Sbjct: 272 REIFSGEI 279
>DAPF_YERPE (P46357) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 89.7 bits (221), Expect = 7e-18 Identities = 49/129 (37%), Positives = 69/129 (53%), Gaps = 3/129 (2%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDI---GPKFEHHEMFPARTNTEFVQVLSRSHLK 501 VSMGNPHCV +QV D+ ++++ GP E+HE FP R N F+QV+SR H++ Sbjct: 153 VSMGNPHCV---------MQVDDVSVANVALLGPVLENHERFPERANIGFMQVVSRDHIR 203 Query: 500 MRVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGP 321 +RV+ER V++ V+LPGG L I W+ + +YMTGP Sbjct: 204 LRVYERGAGETQACGSGACAAVAVGVVQDLLNENVHVELPGGSLHIRWQGPGHPLYMTGP 263 Query: 320 AEAVFYGSI 294 A V+ G I Sbjct: 264 ATHVYDGFI 272
>DAPF_SHEON (Q8E9H5) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 275 Score = 89.4 bits (220), Expect = 1e-17 Identities = 46/132 (34%), Positives = 68/132 (51%) Frame = -3 Query: 689 TWHATCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRS 510 T+ SMGNPHCV L V V + +++IG HE FP N F+QV++ Sbjct: 148 TFLCGAASMGNPHCV------LDVEDVANANVAEIGALLTKHERFPRGVNVGFMQVVNAG 201 Query: 509 HLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYM 330 H+K+RV+ER ++G+ +++ VDLPGG L I W + ++M Sbjct: 202 HIKLRVYERGAAETLACGTGACAAVVVGQIQGKLDQQVQVDLPGGSLTINWEGEGKPLWM 261 Query: 329 TGPAEAVFYGSI 294 TGPA+ V+ G I Sbjct: 262 TGPAQHVYDGQI 273
>DAPF_BRUSU (Q8FYF0) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 303 Score = 89.4 bits (220), Expect = 1e-17 Identities = 49/124 (39%), Positives = 61/124 (49%) Frame = -3 Query: 668 SMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVW 489 SMGNPH V + K+ V +L GP E+H +FP R N V S + +R W Sbjct: 160 SMGNPHAVFWVDKD-----VWSYELDKFGPLLENHPIFPERANISIAHVTSSDTIDLRTW 214 Query: 488 ERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAV 309 ER GR RK V++PGGPL IEWR+D +HV MTGPAE Sbjct: 215 ERGAGLTRACGSAACAAAVSAARTGRTGRKVTVNVPGGPLLIEWRDD-DHVMMTGPAEWE 273 Query: 308 FYGS 297 F G+ Sbjct: 274 FSGT 277
>DAPF_BRUME (Q8YJF0) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 303 Score = 89.4 bits (220), Expect = 1e-17 Identities = 49/124 (39%), Positives = 61/124 (49%) Frame = -3 Query: 668 SMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVW 489 SMGNPH V + K+ V +L GP E+H +FP R N V S + +R W Sbjct: 160 SMGNPHAVFWVDKD-----VWSYELDKFGPLLENHPIFPERANISIAHVTSSDTIDLRTW 214 Query: 488 ERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAV 309 ER GR RK V++PGGPL IEWR+D +HV MTGPAE Sbjct: 215 ERGAGLTRACGSAACAAAVSAARTGRTGRKVTVNVPGGPLLIEWRDD-DHVMMTGPAEWE 273 Query: 308 FYGS 297 F G+ Sbjct: 274 FSGT 277
>DAPF_HAEIN (P44859) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 89.0 bits (219), Expect = 1e-17 Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 3/129 (2%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDI---GPKFEHHEMFPARTNTEFVQVLSRSHLK 501 VSMGNPHCV +QV D++ +++ GP E HE FP R N F+Q++++ H+K Sbjct: 153 VSMGNPHCV---------VQVDDIQTANVEQLGPLLESHERFPERVNAGFMQIINKEHIK 203 Query: 500 MRVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGP 321 +RV+ER +++G VDLPGG L IEW + +YMTG Sbjct: 204 LRVYERGAGETQACGSGACAAVAVGIMQGLLNNNVQVDLPGGSLMIEWNGVGHPLYMTGE 263 Query: 320 AEAVFYGSI 294 A ++ G I Sbjct: 264 ATHIYDGFI 272
>DAPF_ECOLI (P0A6K1) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 88.6 bits (218), Expect = 2e-17 Identities = 47/126 (37%), Positives = 66/126 (52%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VSMGNPHCV ++V V + +GP E HE FP R N F+QV+ R H+++RV Sbjct: 153 VSMGNPHCV------IQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRV 206 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 +ER + +G + V+LPGG L+I W+ + +YMTGPA Sbjct: 207 YERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVH 266 Query: 311 VFYGSI 294 V+ G I Sbjct: 267 VYDGFI 272
>DAPF_ECOL6 (Q8FBN6) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 88.6 bits (218), Expect = 2e-17 Identities = 47/126 (37%), Positives = 66/126 (52%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VSMGNPHCV ++V V + +GP E HE FP R N F+QV+ R H+++RV Sbjct: 153 VSMGNPHCV------IQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRV 206 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 +ER + +G + V+LPGG L+I W+ + +YMTGPA Sbjct: 207 YERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVH 266 Query: 311 VFYGSI 294 V+ G I Sbjct: 267 VYDGFI 272
>DAPF_ECO57 (P0A6K2) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 88.6 bits (218), Expect = 2e-17 Identities = 47/126 (37%), Positives = 66/126 (52%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VSMGNPHCV ++V V + +GP E HE FP R N F+QV+ R H+++RV Sbjct: 153 VSMGNPHCV------IQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRV 206 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 +ER + +G + V+LPGG L+I W+ + +YMTGPA Sbjct: 207 YERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVH 266 Query: 311 VFYGSI 294 V+ G I Sbjct: 267 VYDGFI 272
>DAPF_VIBPA (Q87KJ4) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 276 Score = 88.2 bits (217), Expect = 2e-17 Identities = 48/126 (38%), Positives = 63/126 (50%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VSMGNPH VT V V + +GP E HE FP R N F+QV+SR H+++RV Sbjct: 155 VSMGNPHVVTV------VDDVDTADVDTLGPLLESHERFPERVNAGFMQVVSRDHIRLRV 208 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 +ER +L+G + V LPGG L I W+ ++MTGPA Sbjct: 209 YERGAGETQACGSGACGAVAVGILQGLLDESVKVSLPGGELHISWQGPGKPLFMTGPATH 268 Query: 311 VFYGSI 294 VF G + Sbjct: 269 VFDGQL 274
>DAPF_PSEPK (Q88CF3) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 276 Score = 88.2 bits (217), Expect = 2e-17 Identities = 47/126 (37%), Positives = 61/126 (48%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VSMGNPH V L+V V + ++GPK E+H FP R N F+QV+ R +RV Sbjct: 155 VSMGNPHAV------LRVDDVQTAPVHELGPKIENHPRFPQRVNAGFIQVIDRHRANLRV 208 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 WER + +G + +DLPGG L IEW V MTGPA Sbjct: 209 WERGAGETQACGTGACAAAVAAISQGWMDSPVSLDLPGGRLHIEWAGPGKPVMMTGPAVR 268 Query: 311 VFYGSI 294 V+ G + Sbjct: 269 VYEGQV 274
>DAPF_SALTY (P0A1F2) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 88.2 bits (217), Expect = 2e-17 Identities = 46/126 (36%), Positives = 66/126 (52%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VSMGNPHCV ++V V + +GP E HE FP R N F+QV+ R H+++RV Sbjct: 153 VSMGNPHCV------IQVDNVDTAAVETLGPVLESHERFPERANIGFMQVVRREHIRLRV 206 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 +ER + +G + V+LPGG L+I W+ + +YMTGPA Sbjct: 207 YERGAGETRACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAAH 266 Query: 311 VFYGSI 294 ++ G I Sbjct: 267 IYDGFI 272
>DAPF_SALTI (P0A1F3) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 88.2 bits (217), Expect = 2e-17 Identities = 46/126 (36%), Positives = 66/126 (52%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VSMGNPHCV ++V V + +GP E HE FP R N F+QV+ R H+++RV Sbjct: 153 VSMGNPHCV------IQVDNVDTAAVETLGPVLESHERFPERANIGFMQVVRREHIRLRV 206 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 +ER + +G + V+LPGG L+I W+ + +YMTGPA Sbjct: 207 YERGAGETRACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAAH 266 Query: 311 VFYGSI 294 ++ G I Sbjct: 267 IYDGFI 272
>DAPF_VIBVY (Q7MQC1) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 276 Score = 87.4 bits (215), Expect = 4e-17 Identities = 47/126 (37%), Positives = 63/126 (50%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VSMGNPH VT V V ++ +GP E HE FP R N F+QV++R +++RV Sbjct: 155 VSMGNPHVVTV------VDDVDSAEVETLGPLLESHERFPERVNAGFMQVVNREQIRLRV 208 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 +ER +L+G + V LPGG L I W+ +YMTGPA Sbjct: 209 YERGAGETQACGSGACGAVAVGILQGLLDENVTVSLPGGDLHIHWQGPGKPLYMTGPATH 268 Query: 311 VFYGSI 294 VF G + Sbjct: 269 VFDGQL 274
>DAPF_VIBVU (Q8DD81) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 276 Score = 87.4 bits (215), Expect = 4e-17 Identities = 47/126 (37%), Positives = 63/126 (50%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VSMGNPH VT V V ++ +GP E HE FP R N F+QV++R +++RV Sbjct: 155 VSMGNPHVVTV------VDDVDSAEVETLGPLLESHERFPERVNAGFMQVVNREQIRLRV 208 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 +ER +L+G + V LPGG L I W+ +YMTGPA Sbjct: 209 YERGAGETQACGSGACGAVAVGILQGLLDENVTVSLPGGDLHIHWQGPGKPLYMTGPATH 268 Query: 311 VFYGSI 294 VF G + Sbjct: 269 VFDGQL 274
>DAPF_VIBCH (Q9KVL6) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 276 Score = 87.0 bits (214), Expect = 5e-17 Identities = 47/126 (37%), Positives = 63/126 (50%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VSMGNPH VT V + + +GP E HE FP R N F+QV+SR + +RV Sbjct: 155 VSMGNPHVVTV------VDDIRTAAVETLGPLLESHERFPERVNAGFMQVVSRDEINLRV 208 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 +ER +L+G + + V LPGG LEI W+ +YMTGPA Sbjct: 209 YERGAGETQACGSGACAAVAVGILQGLLDEQVRVHLPGGELEIHWQGPGKPLYMTGPATH 268 Query: 311 VFYGSI 294 ++ G I Sbjct: 269 IYDGQI 274
>DAPF_CAUCR (Q9A280) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 288 Score = 84.7 bits (208), Expect = 2e-16 Identities = 46/127 (36%), Positives = 57/127 (44%) Frame = -3 Query: 674 CVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMR 495 CVSMGNPH V F V D G EHH +FP N F + SR H++++ Sbjct: 161 CVSMGNPHVVFFVDAP-----VTDDFARGTGSLVEHHPLFPEGVNVGFAHIASRDHIRLK 215 Query: 494 VWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAE 315 VWER V G +RK V+ G L IEWRE + HV MTGP Sbjct: 216 VWERGAGLTQACGTGACAAQVAAVRRGLTDRKARVEFDTGSLTIEWRESDGHVIMTGPIT 275 Query: 314 AVFYGSI 294 + G + Sbjct: 276 MEYAGKL 282
>DAPF_OCEIH (Q8ENX2) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 286 Score = 84.7 bits (208), Expect = 2e-16 Identities = 50/132 (37%), Positives = 63/132 (47%), Gaps = 2/132 (1%) Frame = -3 Query: 689 TWHATCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRS 510 T + T VSMGNPH V F V + L +GP E FP N EF++V+S + Sbjct: 155 TQYITAVSMGNPHGVFF------VDDIEKAPLETLGPTIEKDMRFPESINVEFIEVVSPT 208 Query: 509 HLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGRAERK--CIVDLPGGPLEIEWREDNNHV 336 L RVWER L + + +V L GG L IEW+ED NHV Sbjct: 209 ELNFRVWERGSGITQACGTGACAAVVAATLNEKVTKSHPIVVHLAGGDLNIEWKED-NHV 267 Query: 335 YMTGPAEAVFYG 300 +MTGPAE + G Sbjct: 268 WMTGPAEVIATG 279
>DAPF_HAEDU (Q7VPN0) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 84.3 bits (207), Expect = 3e-16 Identities = 44/126 (34%), Positives = 63/126 (50%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VSMGNPHCV L+V + + +G E H FP R N F+Q++ R H+K+RV Sbjct: 153 VSMGNPHCV------LQVDDIEQATVHQLGALLEKHHRFPERANVGFMQIIDRHHIKLRV 206 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 +ER +++G + V LPGG L+IEW+ +YMTG A Sbjct: 207 FERGVGETKACGSGACAAVAVGIMQGVLDANVQVSLPGGTLQIEWQGKGKPLYMTGTATH 266 Query: 311 VFYGSI 294 ++ G I Sbjct: 267 IYDGFI 272
>DAPF_BRAJA (Q89X45) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 291 Score = 83.6 bits (205), Expect = 5e-16 Identities = 45/125 (36%), Positives = 59/125 (47%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VSMGNPH + + V V L+ GP E+H +FP R N ++ R H+ +R Sbjct: 163 VSMGNPHAIFW------VDDVNAYDLARFGPLLENHPIFPERANITLAHIVDRDHITIRT 216 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 WER RAER + LPGG L IEWRE ++HV MTG A Sbjct: 217 WERGAGLTRACGSAACATAVAAARLKRAERNVEITLPGGKLGIEWRERDDHVLMTGTATF 276 Query: 311 VFYGS 297 + G+ Sbjct: 277 EYEGN 281
>DAPF_PSEAE (Q51564) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 276 Score = 83.2 bits (204), Expect = 7e-16 Identities = 46/126 (36%), Positives = 60/126 (47%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VSMGNPH V L+V V + +GP+ E H FP + N F+QVL H ++RV Sbjct: 155 VSMGNPHGV------LRVENVDSAPVHSLGPQLEVHPRFPKKANIGFLQVLDPHHARLRV 208 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 WER + +G + +DLPGG L IEW V MTGPA Sbjct: 209 WERGVGETQACGTGACAAAVAGIRQGWLQSPVQIDLPGGRLHIEWAGPGQPVMMTGPAVR 268 Query: 311 VFYGSI 294 V+ G + Sbjct: 269 VYEGQV 274
>DAPF_AGRT5 (Q8UC03) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 299 Score = 81.6 bits (200), Expect = 2e-15 Identities = 47/130 (36%), Positives = 61/130 (46%), Gaps = 4/130 (3%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 +SMGNPH + + ++ L GP E+H MFP + N QV+S S L+ R Sbjct: 159 MSMGNPHAIFWVDRDPMTFD-----LERFGPLLENHPMFPEKANITLAQVISDSALRTRT 213 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGG----PLEIEWREDNNHVYMTG 324 WER GR RK +D+ PL I+WRED NHV MTG Sbjct: 214 WERGAGLTLACGSAACASAVSAARTGRTGRKVTIDVASSPVRVPLTIDWRED-NHVVMTG 272 Query: 323 PAEAVFYGSI 294 PAE + GS+ Sbjct: 273 PAEWEWSGSV 282
>DAPF_BACHD (Q9K7F0) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 286 Score = 79.3 bits (194), Expect = 1e-14 Identities = 49/134 (36%), Positives = 63/134 (47%), Gaps = 2/134 (1%) Frame = -3 Query: 686 WHATCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSH 507 + T VSMGNPH + F + + D + +GP E HE FP N EFVQV+S + Sbjct: 155 YRLTAVSMGNPHAIMF------IDTIEDAPVEQVGPLLEKHEAFPDWVNVEFVQVVSPTE 208 Query: 506 LKMRVWERXXXXXXXXXXXXXXXXXXXVLEGRAER--KCIVDLPGGPLEIEWREDNNHVY 333 + RVWER VL G ++ + V L GG L I W E N V Sbjct: 209 IHFRVWERGSGITQACGTGACAAVVASVLNGFTQKGQEVTVHLLGGDLTISWLE-NGDVL 267 Query: 332 MTGPAEAVFYGSIV 291 MTG AE + G+ V Sbjct: 268 MTGAAETICEGTYV 281
>DAPF_BACSU (O32114) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 284 Score = 77.4 bits (189), Expect = 4e-14 Identities = 48/128 (37%), Positives = 58/128 (45%), Gaps = 2/128 (1%) Frame = -3 Query: 677 TCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKM 498 T VSMGNPH V + + L+ +GP E FP N EFV+ ++ L Sbjct: 160 TAVSMGNPHIV------FPIADIEQAPLTTLGPVIEKDPRFPEGINVEFVETVNEQELHF 213 Query: 497 RVWERXXXXXXXXXXXXXXXXXXXVLEGRAERK--CIVDLPGGPLEIEWREDNNHVYMTG 324 RVWER VL G ++R V L GG L I W+ DN HV MTG Sbjct: 214 RVWERGSGITQACGTGACAAAVASVLNGVSKRNQDITVHLAGGDLVINWK-DNGHVMMTG 272 Query: 323 PAEAVFYG 300 PAE V G Sbjct: 273 PAETVCEG 280
>DAPF_THETN (Q8R9S4) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 274 Score = 75.9 bits (185), Expect = 1e-13 Identities = 41/132 (31%), Positives = 61/132 (46%) Frame = -3 Query: 689 TWHATCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRS 510 T+ + V +G PH + F V + + ++GPK E +FP TN +FV+V Sbjct: 148 TYRLSSVRVGVPHTILF------VSSFEESFMKELGPKIEKSSLFPEGTNVDFVKVEDEE 201 Query: 509 HLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYM 330 ++ +R WER L GR R V G L +EW+EDN+ +Y+ Sbjct: 202 NISVRTWERGVGLTLACGSGASASAVVSSLLGRTRRSVNVHFKAGVLLVEWKEDNS-IYL 260 Query: 329 TGPAEAVFYGSI 294 +G E VF G I Sbjct: 261 SGEVEEVFRGEI 272
>DAPF_XANAC (Q8PPQ1) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 284 Score = 72.4 bits (176), Expect = 1e-12 Identities = 43/124 (34%), Positives = 57/124 (45%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VSMGNPH V ++V +V + +G + + FP N F QV+ H+++RV Sbjct: 163 VSMGNPHAV------VEVGRVDAAPVERVGALLQQNAAFPDSVNVGFAQVVDPVHVRLRV 216 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 +ER + GR ER V LPGG L I W D V M+GPA Sbjct: 217 FERGVGETLACGSGACAAAAVLMQRGRVERDVQVSLPGGELRIRWPGDQEQVVMSGPAVF 276 Query: 311 VFYG 300 VF G Sbjct: 277 VFDG 280
>DAPF_METJA (Q58519) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 295 Score = 72.4 bits (176), Expect = 1e-12 Identities = 41/128 (32%), Positives = 59/128 (46%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 V++GNPH V F L L IG + EHHE FP R N FV+VL+ + +++ Sbjct: 167 VNVGNPHAVIFVEDNNIDLDFVREHLDVIGKEIEHHEAFPERINVHFVKVLNPNEIRIVT 226 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 WER G+ + + L GG LEIE ++D VYM G A Sbjct: 227 WERGAGYTTACGTGTTASVIMAHKLGKTNNRVLAHLDGGDLEIEIKDDG--VYMIGDAVM 284 Query: 311 VFYGSIVH 288 V+ +++ Sbjct: 285 VYDAKLIN 292
>DAPF_XYLFT (Q87DI4) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 284 Score = 72.0 bits (175), Expect = 2e-12 Identities = 42/124 (33%), Positives = 58/124 (46%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VSMGNPH V E+ ++ V ++ IGP + H FP N FVQV+ +++RV Sbjct: 163 VSMGNPHAVV----EVDLIDVAPVER--IGPLLQQHSAFPESVNVSFVQVIDPGLVRLRV 216 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 +ER + GR R V LPGG L ++W V ++GPA Sbjct: 217 YERGAGETLACGSGACAAAVVLMQRGRVGRDVRVVLPGGTLRVQWPVSGGPVTLSGPARC 276 Query: 311 VFYG 300 VF G Sbjct: 277 VFDG 280
>DAPF_XANCP (Q8P548) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 284 Score = 71.6 bits (174), Expect = 2e-12 Identities = 42/124 (33%), Positives = 58/124 (46%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VSMGNPH V ++V +V + +G + + FP N F QV+ +H+++RV Sbjct: 163 VSMGNPHAV------VEVGRVDAAPVERVGALLQQNAAFPESVNVGFAQVVDPAHVRLRV 216 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 +ER + GR ER V LPGG L I W + V M+GPA Sbjct: 217 YERGVGETLACGSGACAAAVVLMHRGRVERDVRVSLPGGELRIRWAGEQAQVVMSGPAVF 276 Query: 311 VFYG 300 VF G Sbjct: 277 VFDG 280
>DAPF_NEIMA (Q9JV69) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 283 Score = 70.9 bits (172), Expect = 4e-12 Identities = 45/132 (34%), Positives = 64/132 (48%), Gaps = 2/132 (1%) Frame = -3 Query: 677 TCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKM 498 +CV+MGNPH V + V V ++ + G E H FP R N F+Q++SR+ +++ Sbjct: 158 SCVNMGNPHAV------IVVDDVECAQVRETGSLIEPHRQFPERVNVGFMQIVSRTAIRL 211 Query: 497 RVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVD--LPGGPLEIEWREDNNHVYMTG 324 RV+ER + G + V+ LPGG L IEW V MTG Sbjct: 212 RVFERGVGETQACGTGACAAVVAGIRLGLLDEGKTVEVILPGGTLYIEW-ACGGDVMMTG 270 Query: 323 PAEAVFYGSIVH 288 PAE VF G + + Sbjct: 271 PAETVFEGELAY 282
>DAPF_NEIMB (Q9K060) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 283 Score = 70.5 bits (171), Expect = 5e-12 Identities = 46/132 (34%), Positives = 63/132 (47%), Gaps = 2/132 (1%) Frame = -3 Query: 677 TCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKM 498 +CV+MGNPH V + V V + + G E H FP R N F+QV+ R+ +++ Sbjct: 158 SCVNMGNPHAV------IVVDDVECAPVRETGSLIEPHRQFPERVNVGFMQVVGRTAIRL 211 Query: 497 RVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVD--LPGGPLEIEWREDNNHVYMTG 324 RV+ER + G + V+ LPGG L IEW V MTG Sbjct: 212 RVFERGVGETQACGTGACAAVVAGIRLGLLDEGKTVEVVLPGGTLYIEW-ACGGDVMMTG 270 Query: 323 PAEAVFYGSIVH 288 PAEAVF G + + Sbjct: 271 PAEAVFEGELAY 282
>DAPF_BUCAI (P57649) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 284 Score = 70.1 bits (170), Expect = 6e-12 Identities = 39/126 (30%), Positives = 62/126 (49%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VS+GNPHC+ +KV V + ++ IG E + +FP N F+++L++ H+K+RV Sbjct: 163 VSIGNPHCI------IKVQSVKNAPVNIIGDSIEKNPIFPEGVNVSFMEILNKKHIKLRV 216 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 +ER + + V+L GG L I W+ +YM GPA+ Sbjct: 217 YERNVGETKACGSAACAAVAVGIAQKLLSDTVHVELLGGKLIIIWKGFGTPLYMVGPAKH 276 Query: 311 VFYGSI 294 V+ G I Sbjct: 277 VYDGYI 282
>DAPF_RHILO (Q98EB6) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 294 Score = 68.6 bits (166), Expect = 2e-11 Identities = 43/128 (33%), Positives = 57/128 (44%), Gaps = 1/128 (0%) Frame = -3 Query: 677 TCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKM 498 + VSMGNPH + + ++ V +L GP E+H +FP R N QV S + + Sbjct: 157 SAVSMGNPHAIFWVDRD-----VWSYELERFGPLLENHPIFPERANITIAQVTSPESMII 211 Query: 497 RVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLP-GGPLEIEWREDNNHVYMTGP 321 R WER R R + P GG L +EW DN+HV +TG Sbjct: 212 RTWERGAGLTKACGSAACASVVAAARTRRTGRSVNLLTPGGGTLHVEWL-DNDHVILTGA 270 Query: 320 AEAVFYGS 297 AE F GS Sbjct: 271 AEWEFSGS 278
>DAPF_METTH (O27389) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 286 Score = 68.2 bits (165), Expect = 2e-11 Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 2/131 (1%) Frame = -3 Query: 677 TCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKM 498 T +S+GNPH + F V + L +GP E+H +FP R N FV+V+S S + M Sbjct: 159 TALSVGNPHAIIF------VDDAEGVDLDRLGPAIENHPLFPERINVHFVEVVSPSEIIM 212 Query: 497 RVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHV--YMTG 324 WER V + + +V LPGG L+I+ +D + YM G Sbjct: 213 VTWERGAGPTMACGTGATASVIAGVKLEKLDDSVLVHLPGGELKIDVYQDGTELGAYMEG 272 Query: 323 PAEAVFYGSIV 291 A VF G ++ Sbjct: 273 DAVMVFDGILL 283
>DAPF_XYLFA (Q9PD98) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 284 Score = 67.8 bits (164), Expect = 3e-11 Identities = 41/124 (33%), Positives = 58/124 (46%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VSMGNPH V E+ ++ V ++ IG + H FP N FVQV+ +++RV Sbjct: 163 VSMGNPHAVV----EVDLIDVAPVER--IGSLLQQHVAFPESVNVGFVQVIDPGLVRLRV 216 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 +ER + GR R V LPGG L ++W V ++GPA+ Sbjct: 217 YERGAGETLACGSGACAAAVVLMQRGRVGRDVRVVLPGGTLRVQWPVSGGPVTLSGPAKC 276 Query: 311 VFYG 300 VF G Sbjct: 277 VFDG 280
>DAPF1_ANASP (P54897) Diaminopimelate epimerase 1 (EC 5.1.1.7) (DAP epimerase 1)| Length = 285 Score = 67.4 bits (163), Expect = 4e-11 Identities = 36/125 (28%), Positives = 60/125 (48%) Frame = -3 Query: 668 SMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRVW 489 ++GNPHCV + + + + GP FE + +FP RTN +F++VL RS +++ +W Sbjct: 155 TIGNPHCV------ILLDDINSEVARNFGPIFEGYPLFPNRTNVQFMKVLDRSTIQIEIW 208 Query: 488 ERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEAV 309 ER G + K IV +PGG + I+ ++D H+ MT + Sbjct: 209 ERGAGYTLASGSSSSAAAATAHKLGLCDSKIIVKMPGGDILIQIKDD-FHISMTDSVTKL 267 Query: 308 FYGSI 294 G + Sbjct: 268 AQGEL 272
>DAPF_RALSO (Q8Y344) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 292 Score = 67.0 bits (162), Expect = 5e-11 Identities = 41/133 (30%), Positives = 58/133 (43%) Frame = -3 Query: 692 STWHATCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSR 513 + W +T VSMGNPH V V + + GP E H +FP R N F+++ R Sbjct: 156 TAWLST-VSMGNPHAVQV------VDDAEAFPVREDGPLIESHAVFPRRVNAGFMEIADR 208 Query: 512 SHLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVY 333 +++RV+ER + G + V GG L I W + V Sbjct: 209 HAIRLRVYERGAGETLACGTGACAAAVAGIRRGLLDSPVKVTTHGGDLTIAWAGEGEPVM 268 Query: 332 MTGPAEAVFYGSI 294 MTGPA VF G++ Sbjct: 269 MTGPATTVFEGTL 281
>DAPF_BUCBP (P59582) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 286 Score = 66.2 bits (160), Expect = 9e-11 Identities = 38/124 (30%), Positives = 60/124 (48%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VS+GNPHC+ + V + + IG H++FP N FV+VLS++ + +RV Sbjct: 165 VSIGNPHCIIY------VNNLKKYPVKKIGFYLSTHKIFPEGINVNFVEVLSKNEIALRV 218 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 +ER + +G + V+L G L+I W+ + +YMTGPA Sbjct: 219 YERGVGETLACGSGACASVALGIQQGLLFNEVQVNLLNGILKINWKGGSEKLYMTGPAVH 278 Query: 311 VFYG 300 V+ G Sbjct: 279 VYDG 282
>DAPF_BUCAP (Q8K901) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 284 Score = 63.9 bits (154), Expect = 4e-10 Identities = 38/126 (30%), Positives = 62/126 (49%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMRV 492 VS+GNPHCV +KV + + + IG E + +FP N F++V++++H+++RV Sbjct: 163 VSIGNPHCV------IKVESINNAPVKKIGELLEKNSIFPQGINVGFMKVINKNHIQLRV 216 Query: 491 WERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAEA 312 +ER + + VDL GG L I+W+ N +YM G A Sbjct: 217 YERDVGETQSCGSGACAAVAVGIAKNLLCDNVKVDLLGGNLIIKWKGFNYPLYMIGTACH 276 Query: 311 VFYGSI 294 ++ G I Sbjct: 277 IYDGYI 282
>DAPF_CLOPE (Q46185) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 272 Score = 50.8 bits (120), Expect = 4e-06 Identities = 32/127 (25%), Positives = 55/127 (43%) Frame = -3 Query: 677 TCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKM 498 T + MG PH + F ++ + + G E +E+FP TN F +V+ R+ +++ Sbjct: 154 TSLLMGVPHTIIFEEEKYPI---------ECGRDIEKYELFPQGTNVNFCKVIDRNTMEV 204 Query: 497 RVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPA 318 R WER G +++ V +PGG L++ +D V M G A Sbjct: 205 RTWERGAGPTLACGTGNCASVIAANKLGLVDKEVKVIVPGGELKVNIEDDG--VKMIGNA 262 Query: 317 EAVFYGS 297 + G+ Sbjct: 263 SFICDGT 269
>DAPF_CORGL (Q8NP73) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 277 Score = 48.5 bits (114), Expect = 2e-05 Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 3/129 (2%) Frame = -3 Query: 671 VSMGNPH--CVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKM 498 V MGNPH CV G L + D++L P F+ E FP N E V L + M Sbjct: 155 VDMGNPHLACVVPG---LSASALADMELR--APTFDQ-EFFPHGVNVEIVTELEDDAVSM 208 Query: 497 RVWERXXXXXXXXXXXXXXXXXXXVLE-GRAERKCIVDLPGGPLEIEWREDNNHVYMTGP 321 RVWER + + G E V +PGG +E++ +D + +TGP Sbjct: 209 RVWERGVGETRSCGTGTVAAACAALADAGLGEGTVKVCVPGGEVEVQIFDDGS--TLTGP 266 Query: 320 AEAVFYGSI 294 + + G + Sbjct: 267 SAIIALGEV 275
>DAPF_WIGBR (Q8D2T4) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 276 Score = 45.4 bits (106), Expect = 2e-04 Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 2/130 (1%) Frame = -3 Query: 677 TC--VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHL 504 TC V +GNPHC+ K ++ + L + + +FP + N + +L + Sbjct: 151 TCYFVFVGNPHCIIIS----KNIEYNNFSL--LSKYLLKNNIFPNKINISIMNILDFDLI 204 Query: 503 KMRVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTG 324 K++V+ER + + +K V+ G L + W + N + + G Sbjct: 205 KLKVYERGSGETQSCGSAAAAAAAVAIYYKKLNKKIKVNFSRGNLYVYWEKIGNFMSIIG 264 Query: 323 PAEAVFYGSI 294 PA ++ G I Sbjct: 265 PANHIYDGKI 274
>DAPF_AQUAE (O67693) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 279 Score = 43.9 bits (102), Expect = 5e-04 Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 4/135 (2%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMF-PARTNTEFVQVLSRSHLKMR 495 ++ G PH V + V V + + +G HE F P TN FVQ +S +K+R Sbjct: 149 INTGVPHFV------VPVEDVEKVNVIKLGRAIRFHEEFQPKGTNVNFVQPVSEDTIKVR 202 Query: 494 VWERXXXXXXXX-XXXXXXXXXXXVLEGRAERK--CIVDLPGGPLEIEWREDNNHVYMTG 324 +ER L+G ++K ++ G L I++ ED V++TG Sbjct: 203 TYERGVESETLACGTGATACAIVSYLKGLVKKKPVNVLTRSGEVLTIDFSEDLKEVFLTG 262 Query: 323 PAEAVFYGSIVH*VL 279 VF G + VL Sbjct: 263 SVYKVFEGRLSEEVL 277
>DAPF_CHLTE (Q8KAX9) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 257 Score = 43.1 bits (100), Expect = 8e-04 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%) Frame = -3 Query: 686 WHATCVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHH-EMFPARTNTEFVQVLSRS 510 W+ V G+PH + + V + L + G H+ E+FP TN F+++ + Sbjct: 127 WNCHFVDTGSPHAIAY------VNNLDQLDVLTEGGNIRHNKELFPDGTNVNFLEITAPD 180 Query: 509 HLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLP---GGPLEIEWREDNNH 339 L +R +ER +V + G L + + E + Sbjct: 181 ALSIRTFERGVEDETLACGTGTVAAALMSFRLGKVTSSLVRVKVKSGETLMVGFNEMMDE 240 Query: 338 VYMTGPAEAVFYGSI 294 +Y+ GPA AV+ G+I Sbjct: 241 IYLEGPARAVYRGTI 255
>DAPF_STRCO (O69969) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 289 Score = 41.6 bits (96), Expect = 0.002 Identities = 41/139 (29%), Positives = 48/139 (34%), Gaps = 10/139 (7%) Frame = -3 Query: 686 WHATCVSMGNPHCVTFGSKELKVLQVXDLKLSD---IGPKFEHHEMFPARTNTEFVQVLS 516 W A V+MGNPH V F V DL + P +P N EFV Sbjct: 149 WPARNVNMGNPHAVAF---------VADLDHAGDLYAPPSHAPAGAYPDGVNVEFVVDRG 199 Query: 515 RSHLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGRAERKC-------IVDLPGGPLEIEW 357 H+ MRV ER + VD+PGG L I Sbjct: 200 PRHVAMRVHERGSGETRSCGTGACAVAVATARRDGLDPAATGTPATYTVDVPGGTLVITE 259 Query: 356 REDNNHVYMTGPAEAVFYG 300 R D + MTGPA V G Sbjct: 260 RPD-GEIEMTGPAVIVAEG 277
>DAPF_CHLPN (Q9Z833) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 257 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Frame = -3 Query: 674 CVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMF-PARTNTEFVQVLSRSHLKM 498 C+ G PH V + ++ L LS +GP +H+ F P N FVQ+L L++ Sbjct: 140 CIHTGVPHAVVI------LPEISTLDLSILGPFLRYHQTFSPDGVNVNFVQILGHCQLRV 193 Query: 497 RVWER 483 R +ER Sbjct: 194 RTYER 198
>DAPF_RICCN (Q92I41) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 270 Score = 39.3 bits (90), Expect = 0.011 Identities = 31/125 (24%), Positives = 49/125 (39%) Frame = -3 Query: 674 CVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMR 495 CV +GNPH V F L+ D K+ +G + + E+F N F +V + + + Sbjct: 150 CVDIGNPHVVIFSK-----LEPQDQKI--VGERLQAKELFADGVNVNFAEV-KDNKIYLS 201 Query: 494 VWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAE 315 VWER + G + G L + +E+N ++ M G A Sbjct: 202 VWERGAGLTLACGSGACGSFAAGLKRGFIHSPSTIVFKHGNLTM--KEENGNIIMQGAAT 259 Query: 314 AVFYG 300 V G Sbjct: 260 LVARG 264
>DAPF_COREF (Q8FPE1) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 283 Score = 38.1 bits (87), Expect = 0.025 Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 7/133 (5%) Frame = -3 Query: 671 VSMGNPH--CVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRS---- 510 V +GNPH CV G L + ++ L P F+ FP N E V L+ Sbjct: 157 VDLGNPHLACVVPG---LTPAALKNIALE--APVFDT-AFFPRGVNVELVTELADGLDDP 210 Query: 509 HLKMRVWERXXXXXXXXXXXXXXXXXXXVLE-GRAERKCIVDLPGGPLEIEWREDNNHVY 333 + MRVWER + + G+A V +PGG +E+ RE+ + Sbjct: 211 AIHMRVWERGVGETRSCGTGTVAAARAALADAGQAVGTVTVYVPGGAVEVGIREETS--T 268 Query: 332 MTGPAEAVFYGSI 294 +TGP+ + G++ Sbjct: 269 LTGPSRIIATGTV 281
>DAPF_RICPR (Q9ZDB7) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 270 Score = 37.0 bits (84), Expect = 0.057 Identities = 31/125 (24%), Positives = 47/125 (37%) Frame = -3 Query: 674 CVSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFPARTNTEFVQVLSRSHLKMR 495 CV +GNPH + F E + + IG K + E+F N F +V + + + Sbjct: 150 CVDIGNPHLIIFSKLEPQDKTI-------IGQKLQAKELFADGVNVNFAEV-KDNKIYLS 201 Query: 494 VWERXXXXXXXXXXXXXXXXXXXVLEGRAERKCIVDLPGGPLEIEWREDNNHVYMTGPAE 315 VWER + G V G L + RE++ ++ M G A Sbjct: 202 VWERGAGLTLACGSGACASFAAGLKLGFVHSPSTVVFEYGNLIM--REEDGNIIMQGAAT 259 Query: 314 AVFYG 300 V G Sbjct: 260 FVMRG 264
>DAPF_LEIXX (Q6AE05) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 292 Score = 35.4 bits (80), Expect = 0.17 Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 11/137 (8%) Frame = -3 Query: 671 VSMGNPHCVTFGSKELKVLQVXDLKLSDIGPKFEHHEMFP-ARTNTEFV---QVLSRS-- 510 + +GNPH V + E + L+ DL H E P N EFV + L + Sbjct: 160 IDLGNPHVVVALADESE-LESADLTY------IPHLEPAPQGGANVEFVVPHEPLVKDGV 212 Query: 509 -HLKMRVWERXXXXXXXXXXXXXXXXXXXV--LEGRAERKCIVDLPGGPLEIEW--REDN 345 ++MRV ER A + VD+PGG + + ED Sbjct: 213 GRIRMRVHERGSGETLSCGTGAAAAALAVRHWAGENAPGQWWVDVPGGTVGVRMFPTEDG 272 Query: 344 NHVYMTGPAEAVFYGSI 294 HV ++GPAE V+ G++ Sbjct: 273 EHVALSGPAELVYTGAL 289 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,299,537 Number of Sequences: 219361 Number of extensions: 1693995 Number of successful extensions: 3898 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 3750 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3818 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6856295237 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
