ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104119.1| Zea mays PCO102509 mRNA sequence 462 e-127
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 159 1e-35
4emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa... 159 1e-35
5ref|NM_115218.2| Arabidopsis thaliana diaminopimelate epimerase ... 88 5e-14
6gb|AY143871.1| Arabidopsis thaliana At3g53580/F4P12_280 mRNA, co... 88 5e-14
7gb|AY126996.1| Arabidopsis thaliana AT3g53580/F4P12_280 mRNA, co... 88 5e-14
8emb|BX824658.1|CNS0A5P2 Arabidopsis thaliana Full-length cDNA Co... 88 5e-14
9emb|BX824490.1|CNS0A5M7 Arabidopsis thaliana Full-length cDNA Co... 88 5e-14
10emb|BX823864.1|CNS0A5G8 Arabidopsis thaliana Full-length cDNA Co... 88 5e-14
11emb|BX823665.1|CNS0A5C1 Arabidopsis thaliana Full-length cDNA Co... 88 5e-14
12emb|BX825393.1|CNS0A53P Arabidopsis thaliana Full-length cDNA Co... 88 5e-14
13emb|BX824557.1|CNS0A5IO Arabidopsis thaliana Full-length cDNA Co... 80 1e-11
14emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa... 72 3e-09
15gb|BT012750.1| Lycopersicon esculentum clone 113689R, mRNA sequence 66 2e-07
16gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 44 0.61
17gb|AC130209.3| Mus musculus BAC clone RP24-369J19 from chromosom... 44 0.61
18gb|AC166249.3| Mus musculus 10 BAC RP23-411N5 (Roswell Park Canc... 44 0.61
19gb|BC083524.1| Danio rerio zgc:92584, mRNA (cDNA clone MGC:92584... 42 2.4
20gb|AC110814.5| Homo sapiens BAC clone RP11-1338A7 from 4, comple... 42 2.4
21ref|NM_001005933.1| Danio rerio zgc:92584 (zgc:92584), mRNA 42 2.4
22gb|BC097101.1| Danio rerio zgc:92584, mRNA (cDNA clone MGC:11403... 42 2.4
23gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 42 2.4
24gb|AC107666.13| Mus musculus chromosome 5, clone RP23-111M3, com... 42 2.4
25gb|AC008221.5| Drosophila melanogaster clone BACR30B13, complete... 40 9.5
26gb|AC110812.4| Homo sapiens BAC clone RP11-813J18 from 4, comple... 40 9.5
27gb|AC117215.3| Mus musculus BAC clone RP23-308M1 from 7, complet... 40 9.5
28gb|AY225624.1| Uncultured epsilon proteobacterium clone AT-pp27 ... 40 9.5
29emb|AL592148.7| Human DNA sequence from clone RP11-378J18 on chr... 40 9.5
30emb|AL356321.9| Human DNA sequence from clone RP11-282M24 on chr... 40 9.5
31emb|BX323861.10| Zebrafish DNA sequence from clone CH211-209F23 ... 40 9.5
32emb|AL935302.7| Zebrafish DNA sequence from clone DKEY-13N1 in l... 40 9.5
33gb|L77616.1| Oryza sativa dihydrodipicolinate synthase gene, com... 40 9.5
34dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
35dbj|BS000166.1| Pan troglodytes chromosome 22 clone:RP43-094M15,... 40 9.5
36emb|BX005052.6| Zebrafish DNA sequence from clone CH211-42O7 in ... 40 9.5
37gb|AE003777.3| Drosophila melanogaster chromosome 3R, section 11... 40 9.5
38dbj|AP002958.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 9.5
39emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BA... 40 9.5
40emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4,... 40 9.5
41gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complet... 40 9.5
42gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, co... 40 9.5
43gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome 40 9.5
44gb|DQ228581.1| Uncultured bacterium clone LC1149b9 16S ribosomal... 40 9.5
45dbj|AB055342.1| Macaca fascicularis brain cDNA, clone:QflA-11322 40 9.5 
>gb|AY104119.1| Zea mays PCO102509 mRNA sequence
          Length = 1191

 Score =  462 bits (233), Expect = e-127
 Identities = 370/416 (88%)
 Strand = Plus / Minus

                                                                       
Query: 275 tccccagcacctagtgtacaatagatccgtagaagacagcctccgcaggaccagtcatgt 334
           ||||||| |||||||| |||| |||||| || ||||| ||||| ||||||||||||||||
Sbjct: 673 tccccagtacctagtgaacaacagatccataaaagacggcctctgcaggaccagtcatgt 614

                                                                       
Query: 335 aaacatgattgttatcctccctccattcaatttccaatggcccaccaggcaaatcaacta 394
           |||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 613 aaacatgattgtcatcctccctccactcaatttccaatggcccgccaggcaaatcaacta 554

                                                                       
Query: 395 tacatttccgttcagctcggccctcaagaacagctgcaacaacaactgcacaagcaccag 454
            ||||||||| |||||||| ||||||||||||||||||||||| || |||||||||||||
Sbjct: 553 cacatttccgctcagctcgaccctcaagaacagctgcaacaaccaccgcacaagcaccag 494

                                                                       
Query: 455 tcccacaagcaagagttgctccagcaccgcgctcccaaactcgcattttgaggtgtgaac 514
           | ||||| |||||||||||||||||||| || ||||| |||||||||||||||||||| |
Sbjct: 493 taccacaggcaagagttgctccagcaccacgttcccagactcgcattttgaggtgtgagc 434

                                                                       
Query: 515 gagacaagacctgtacaaactcagtgttggtccgagcaggaaacatttcatgatgctcaa 574
           ||||||| |||||||||||||| ||||| || ||||||||||||||||||||||||||||
Sbjct: 433 gagacaaaacctgtacaaactctgtgtttgtgcgagcaggaaacatttcatgatgctcaa 374

                                                                       
Query: 575 atttgggcccaatatcactaagcttcagatcatnaacctgcagaacctttaactcttttg 634
           |||| |||||||| || ||||| || | ||| |  |||||||  ||||||||||| ||||
Sbjct: 373 atttaggcccaatttcgctaagttttaaatcgtcgacctgcaatacctttaactcatttg 314

                                                                   
Query: 635 aaccaaacgtgacgcaatgaggattgcccatgctaacacaggttgcatgccatgtt 690
            |||||| ||||| || ||||| || |||||||||||||| ||  |||||||||||
Sbjct: 313 caccaaatgtgacacagtgagggtttcccatgctaacacatgtgacatgccatgtt 258
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  159 bits (80), Expect = 1e-35
 Identities = 110/120 (91%)
 Strand = Plus / Minus

                                                                            
Query: 283      acctagtgtacaatagatccgtagaagacagcctccgcaggaccagtcatgtaaacatga 342
                |||||||| |||  |||||| |||||||||||||| ||||||||||||||||||| ||||
Sbjct: 23355700 acctagtgaacagcagatccatagaagacagcctctgcaggaccagtcatgtaaatatga 23355641

                                                                            
Query: 343      ttgttatcctccctccattcaatttccaatggcccaccaggcaaatcaactatacatttc 402
                |||| ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||
Sbjct: 23355640 ttgtcatcctccctccattcgatttccaatggtccaccaggcaaatcaactacacatttc 23355581



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 76/85 (89%)
 Strand = Plus / Minus

                                                                            
Query: 538      gtgttggtccgagcaggaaacatttcatgatgctcaaatttgggcccaatatcactaagc 597
                |||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 23355001 gtgttggtgcgggcaggaaacatttcatgatgctcgaatttaggcccaatatcactaagc 23354942

                                         
Query: 598      ttcagatcatnaacctgcagaacct 622
                || | ||||| ||| |||| |||||
Sbjct: 23354941 tttaaatcatcaacatgcaaaacct 23354917



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                            
Query: 402      ccgttcagctcggccctcaagaacagctgcaacaacaactgcacaagcaccagtcccaca 461
                |||||||||||| ||||| || |||||||||||||| |||||||||||||| || |||||
Sbjct: 23355483 ccgttcagctcgaccctcgaggacagctgcaacaactactgcacaagcaccggttccaca 23355424

                      
Query: 462      agcaag 467
                ||||||
Sbjct: 23355423 agcaag 23355418



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                        
Query: 637      ccaaacgtgacgcaatgaggattgcccatgctaacacaggttgcatgccatgttga 692
                ||||| ||||| ||||| |||||||||||||||||||||||| | |||||||||||
Sbjct: 23354280 ccaaatgtgacacaatgtggattgcccatgctaacacaggttacttgccatgttga 23354225



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                           
Query: 475      ccagcaccgcgctcccaaactcgcattttgaggtgtgaacgagacaagacctgtacaaa 533
                |||||||| |||||||| |||| ||||||||||||||| ||||||| ||||| ||||||
Sbjct: 23355151 ccagcaccacgctcccagactctcattttgaggtgtgagcgagacaggacctctacaaa 23355093
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  159 bits (80), Expect = 1e-35
 Identities = 110/120 (91%)
 Strand = Plus / Minus

                                                                            
Query: 283      acctagtgtacaatagatccgtagaagacagcctccgcaggaccagtcatgtaaacatga 342
                |||||||| |||  |||||| |||||||||||||| ||||||||||||||||||| ||||
Sbjct: 23283891 acctagtgaacagcagatccatagaagacagcctctgcaggaccagtcatgtaaatatga 23283832

                                                                            
Query: 343      ttgttatcctccctccattcaatttccaatggcccaccaggcaaatcaactatacatttc 402
                |||| ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||
Sbjct: 23283831 ttgtcatcctccctccattcgatttccaatggtccaccaggcaaatcaactacacatttc 23283772



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 76/85 (89%)
 Strand = Plus / Minus

                                                                            
Query: 538      gtgttggtccgagcaggaaacatttcatgatgctcaaatttgggcccaatatcactaagc 597
                |||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 23283192 gtgttggtgcgggcaggaaacatttcatgatgctcgaatttaggcccaatatcactaagc 23283133

                                         
Query: 598      ttcagatcatnaacctgcagaacct 622
                || | ||||| ||| |||| |||||
Sbjct: 23283132 tttaaatcatcaacatgcaaaacct 23283108



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                            
Query: 402      ccgttcagctcggccctcaagaacagctgcaacaacaactgcacaagcaccagtcccaca 461
                |||||||||||| ||||| || |||||||||||||| |||||||||||||| || |||||
Sbjct: 23283674 ccgttcagctcgaccctcgaggacagctgcaacaactactgcacaagcaccggttccaca 23283615

                      
Query: 462      agcaag 467
                ||||||
Sbjct: 23283614 agcaag 23283609



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                        
Query: 637      ccaaacgtgacgcaatgaggattgcccatgctaacacaggttgcatgccatgttga 692
                ||||| ||||| ||||| |||||||||||||||||||||||| | |||||||||||
Sbjct: 23282471 ccaaatgtgacacaatgtggattgcccatgctaacacaggttacttgccatgttga 23282416



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                           
Query: 475      ccagcaccgcgctcccaaactcgcattttgaggtgtgaacgagacaagacctgtacaaa 533
                |||||||| |||||||| |||| ||||||||||||||| ||||||| ||||| ||||||
Sbjct: 23283342 ccagcaccacgctcccagactctcattttgaggtgtgagcgagacaggacctctacaaa 23283284
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>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 162261

 Score =  159 bits (80), Expect = 1e-35
 Identities = 110/120 (91%)
 Strand = Plus / Plus

                                                                          
Query: 283    acctagtgtacaatagatccgtagaagacagcctccgcaggaccagtcatgtaaacatga 342
              |||||||| |||  |||||| |||||||||||||| ||||||||||||||||||| ||||
Sbjct: 146459 acctagtgaacagcagatccatagaagacagcctctgcaggaccagtcatgtaaatatga 146518

                                                                          
Query: 343    ttgttatcctccctccattcaatttccaatggcccaccaggcaaatcaactatacatttc 402
              |||| ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||
Sbjct: 146519 ttgtcatcctccctccattcgatttccaatggtccaccaggcaaatcaactacacatttc 146578



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                          
Query: 538    gtgttggtccgagcaggaaacatttcatgatgctcaaatttgggcccaatatcactaagc 597
              |||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 147158 gtgttggtgcgggcaggaaacatttcatgatgctcgaatttaggcccaatatcactaagc 147217

                                       
Query: 598    ttcagatcatnaacctgcagaacct 622
              || | ||||| ||| |||| |||||
Sbjct: 147218 tttaaatcatcaacatgcaaaacct 147242



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                          
Query: 402    ccgttcagctcggccctcaagaacagctgcaacaacaactgcacaagcaccagtcccaca 461
              |||||||||||| ||||| || |||||||||||||| |||||||||||||| || |||||
Sbjct: 146676 ccgttcagctcgaccctcgaggacagctgcaacaactactgcacaagcaccggttccaca 146735

                    
Query: 462    agcaag 467
              ||||||
Sbjct: 146736 agcaag 146741



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                      
Query: 637    ccaaacgtgacgcaatgaggattgcccatgctaacacaggttgcatgccatgttga 692
              ||||| ||||| ||||| |||||||||||||||||||||||| | |||||||||||
Sbjct: 147879 ccaaatgtgacacaatgtggattgcccatgctaacacaggttacttgccatgttga 147934



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                         
Query: 475    ccagcaccgcgctcccaaactcgcattttgaggtgtgaacgagacaagacctgtacaaa 533
              |||||||| |||||||| |||| ||||||||||||||| ||||||| ||||| ||||||
Sbjct: 147008 ccagcaccacgctcccagactctcattttgaggtgtgagcgagacaggacctctacaaa 147066
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>ref|NM_115218.2| Arabidopsis thaliana diaminopimelate epimerase AT3G53580 mRNA,
           complete cds
          Length = 1336

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 134/164 (81%)
 Strand = Plus / Minus

                                                                       
Query: 409 gctcggccctcaagaacagctgcaacaacaactgcacaagcaccagtcccacaagcaaga 468
           ||||| || ||||| || ||||||||||| |  |||||||| ||||| ||||| || | |
Sbjct: 985 gctcgaccttcaaggactgctgcaacaaccagagcacaagctccagttccacaggccaaa 926

                                                                       
Query: 469 gttgctccagcaccgcgctcccaaactcgcattttgaggtgtgaacgagacaagacctgt 528
           |||||||| || ||||||||||| || |||||||| |  || ||||| || |||||||  
Sbjct: 925 gttgctcctgctccgcgctcccacacacgcattttcaaatgagaacgtgataagacctca 866

                                                       
Query: 529 acaaactcagtgttggtccgagcaggaaacatttcatgatgctc 572
           ||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 865 acaaattctgtgttagttcgagctgggaacatttcatgatgctc 822
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>gb|AY143871.1| Arabidopsis thaliana At3g53580/F4P12_280 mRNA, complete cds
          Length = 1089

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 134/164 (81%)
 Strand = Plus / Minus

                                                                       
Query: 409 gctcggccctcaagaacagctgcaacaacaactgcacaagcaccagtcccacaagcaaga 468
           ||||| || ||||| || ||||||||||| |  |||||||| ||||| ||||| || | |
Sbjct: 965 gctcgaccttcaaggactgctgcaacaaccagagcacaagctccagttccacaggccaaa 906

                                                                       
Query: 469 gttgctccagcaccgcgctcccaaactcgcattttgaggtgtgaacgagacaagacctgt 528
           |||||||| || ||||||||||| || |||||||| |  || ||||| || |||||||  
Sbjct: 905 gttgctcctgctccgcgctcccacacacgcattttcaaatgagaacgtgataagacctca 846

                                                       
Query: 529 acaaactcagtgttggtccgagcaggaaacatttcatgatgctc 572
           ||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 845 acaaattctgtgttagttcgagctgggaacatttcatgatgctc 802
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>gb|AY126996.1| Arabidopsis thaliana AT3g53580/F4P12_280 mRNA, complete cds
          Length = 1279

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 134/164 (81%)
 Strand = Plus / Minus

                                                                       
Query: 409 gctcggccctcaagaacagctgcaacaacaactgcacaagcaccagtcccacaagcaaga 468
           ||||| || ||||| || ||||||||||| |  |||||||| ||||| ||||| || | |
Sbjct: 991 gctcgaccttcaaggactgctgcaacaaccagagcacaagctccagttccacaggccaaa 932

                                                                       
Query: 469 gttgctccagcaccgcgctcccaaactcgcattttgaggtgtgaacgagacaagacctgt 528
           |||||||| || ||||||||||| || |||||||| |  || ||||| || |||||||  
Sbjct: 931 gttgctcctgctccgcgctcccacacacgcattttcaaatgagaacgtgataagacctca 872

                                                       
Query: 529 acaaactcagtgttggtccgagcaggaaacatttcatgatgctc 572
           ||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 871 acaaattctgtgttagttcgagctgggaacatttcatgatgctc 828
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>emb|BX824658.1|CNS0A5P2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH62ZG11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1199

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 134/164 (81%)
 Strand = Plus / Minus

                                                                       
Query: 409 gctcggccctcaagaacagctgcaacaacaactgcacaagcaccagtcccacaagcaaga 468
           ||||| || ||||| || ||||||||||| |  |||||||| ||||| ||||| || | |
Sbjct: 956 gctcgaccttcaaggactgctgcaacaaccagagcacaagctccagttccacaggccaaa 897

                                                                       
Query: 469 gttgctccagcaccgcgctcccaaactcgcattttgaggtgtgaacgagacaagacctgt 528
           |||||||| || ||||||||||| || |||||||| |  || ||||| || |||||||  
Sbjct: 896 gttgctcctgctccgcgctcccacacacgcattttcaaatgagaacgtgataagacctca 837

                                                       
Query: 529 acaaactcagtgttggtccgagcaggaaacatttcatgatgctc 572
           ||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 836 acaaattctgtgttagttcgagctgggaacatttcatgatgctc 793
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>emb|BX824490.1|CNS0A5M7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH51ZE09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1250

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 134/164 (81%)
 Strand = Plus / Minus

                                                                       
Query: 409 gctcggccctcaagaacagctgcaacaacaactgcacaagcaccagtcccacaagcaaga 468
           ||||| || ||||| || ||||||||||| |  |||||||| ||||| ||||| || | |
Sbjct: 955 gctcgaccttcaaggactgctgcaacaaccagagcacaagctccagttccacaggccaaa 896

                                                                       
Query: 469 gttgctccagcaccgcgctcccaaactcgcattttgaggtgtgaacgagacaagacctgt 528
           |||||||| || ||||||||||| || |||||||| |  || ||||| || |||||||  
Sbjct: 895 gttgctcctgctccgcgctcccacacacgcattttcaaatgagaacgtgataagacctca 836

                                                       
Query: 529 acaaactcagtgttggtccgagcaggaaacatttcatgatgctc 572
           ||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 835 acaaattctgtgttagttcgagctgggaacatttcatgatgctc 792
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>emb|BX823864.1|CNS0A5G8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS85ZC08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1282

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 134/164 (81%)
 Strand = Plus / Minus

                                                                       
Query: 409 gctcggccctcaagaacagctgcaacaacaactgcacaagcaccagtcccacaagcaaga 468
           ||||| || ||||| || ||||||||||| |  |||||||| ||||| ||||| || | |
Sbjct: 960 gctcgaccttcaaggactgctgcaacaaccagagcacaagctccagttccacaggccaaa 901

                                                                       
Query: 469 gttgctccagcaccgcgctcccaaactcgcattttgaggtgtgaacgagacaagacctgt 528
           |||||||| || ||||||||||| || |||||||| |  || ||||| || |||||||  
Sbjct: 900 gttgctcctgctccgcgctcccacacacgcattttcaaatgagaacgtgataagacctca 841

                                                       
Query: 529 acaaactcagtgttggtccgagcaggaaacatttcatgatgctc 572
           ||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 840 acaaattctgtgttagttcgagctgggaacatttcatgatgctc 797
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>emb|BX823665.1|CNS0A5C1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS63ZG11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1244

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 134/164 (81%)
 Strand = Plus / Minus

                                                                       
Query: 409 gctcggccctcaagaacagctgcaacaacaactgcacaagcaccagtcccacaagcaaga 468
           ||||| || ||||| || ||||||||||| |  |||||||| ||||| ||||| || | |
Sbjct: 972 gctcgaccttcaaggactgctgcaacaaccagagcacaagctccagttccacaggccaaa 913

                                                                       
Query: 469 gttgctccagcaccgcgctcccaaactcgcattttgaggtgtgaacgagacaagacctgt 528
           |||||||| || ||||||||||| || |||||||| |  || ||||| || |||||||  
Sbjct: 912 gttgctcctgctccgcgctcccacacacgcattttcaaatgagaacgtgataagacctca 853

                                                       
Query: 529 acaaactcagtgttggtccgagcaggaaacatttcatgatgctc 572
           ||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 852 acaaattctgtgttagttcgagctgggaacatttcatgatgctc 809
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>emb|BX825393.1|CNS0A53P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL34ZB07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1270

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 134/164 (81%)
 Strand = Plus / Minus

                                                                       
Query: 409 gctcggccctcaagaacagctgcaacaacaactgcacaagcaccagtcccacaagcaaga 468
           ||||| || ||||| || ||||||||||| |  |||||||| ||||| ||||| || | |
Sbjct: 976 gctcgaccttcaaggactgctgcaacaaccagagcacaagctccagttccacaggccaaa 917

                                                                       
Query: 469 gttgctccagcaccgcgctcccaaactcgcattttgaggtgtgaacgagacaagacctgt 528
           |||||||| || ||||||||||| || |||||||| |  || ||||| || |||||||  
Sbjct: 916 gttgctcctgctccgcgctcccacacacgcattttcaaatgagaacgtgataagacctca 857

                                                       
Query: 529 acaaactcagtgttggtccgagcaggaaacatttcatgatgctc 572
           ||||| || ||||| || ||||| || |||||||||||||||||
Sbjct: 856 acaaattctgtgttagttcgagctgggaacatttcatgatgctc 813
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>emb|BX824557.1|CNS0A5IO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH56ZB03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1210

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 133/164 (81%)
 Strand = Plus / Minus

                                                                       
Query: 409 gctcggccctcaagaacagctgcaacaacaactgcacaagcaccagtcccacaagcaaga 468
           ||||| || ||||| || ||||||||||| |  |||||||| ||||| ||||| || | |
Sbjct: 971 gctcgaccttcaaggactgctgcaacaaccagagcacaagctccagttccacaggccaaa 912

                                                                       
Query: 469 gttgctccagcaccgcgctcccaaactcgcattttgaggtgtgaacgagacaagacctgt 528
           |||||||| || ||||||||||| || |||||||| |  || ||||| || |||||||  
Sbjct: 911 gttgctcctgctccgcgctcccacacacgcattttcaaatgagaacgtgataagacctca 852

                                                       
Query: 529 acaaactcagtgttggtccgagcaggaaacatttcatgatgctc 572
           ||| | || ||||| || ||||| || |||||||||||||||||
Sbjct: 851 acatattctgtgttagttcgagctgggaacatttcatgatgctc 808
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>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 168063

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                      
Query: 637    ccaaacgtgacgcaatgaggattgcccatgctaacacaggttgcatgccatgttga 692
              ||||| ||||| ||||| |||||||||||||||||||||||| | |||||||||||
Sbjct: 167398 ccaaatgtgacacaatgtggattgcccatgctaacacaggttacttgccatgttga 167343
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>gb|BT012750.1| Lycopersicon esculentum clone 113689R, mRNA sequence
          Length = 1395

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 129/161 (80%)
 Strand = Plus / Minus

                                                                       
Query: 415 ccctcaagaacagctgcaacaacaactgcacaagcaccagtcccacaagcaagagttgct 474
           |||||||| || ||||||||||| || |||||||| || |||||||| || || ||  | 
Sbjct: 970 ccctcaagcactgctgcaacaactacggcacaagctcctgtcccacaggctagtgtctcg 911

                                                                       
Query: 475 ccagcaccgcgctcccaaactcgcattttgaggtgtgaacgagacaagacctgtacaaac 534
           || ||||| || ||||| || |||||||| |||||||   | || || || || ||||| 
Sbjct: 910 cctgcaccacgttcccagacacgcattttaaggtgtgttggggagaaaacttgaacaaat 851

                                                    
Query: 535 tcagtgttggtccgagcaggaaacatttcatgatgctcaaa 575
           || ||||| || |||||||||||||| |||||||| |||||
Sbjct: 850 tctgtgttcgtgcgagcaggaaacatctcatgatgttcaaa 810



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 636 accaaacgtgacgcaatgaggattgcccatgctaacacaggttgcatgccatgt 689
           |||||| ||||| ||||| ||||| |||||||||||||||||| ||| ||||||
Sbjct: 752 accaaaagtgacacaatggggattccccatgctaacacaggttacattccatgt 699
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 357     ccattcaatttccaatggcccaccaggcaa 386
               ||||||||||||||| || |||||||||||
Sbjct: 3839233 ccattcaatttccaaagggccaccaggcaa 3839204
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>gb|AC130209.3| Mus musculus BAC clone RP24-369J19 from chromosome 6, complete sequence
          Length = 154867

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 516    agacaagacctgtacaaactca 537
              ||||||||||||||||||||||
Sbjct: 129263 agacaagacctgtacaaactca 129284
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>gb|AC166249.3| Mus musculus 10 BAC RP23-411N5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 203983

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 516   agacaagacctgtacaaactca 537
             ||||||||||||||||||||||
Sbjct: 65499 agacaagacctgtacaaactca 65520
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>gb|BC083524.1| Danio rerio zgc:92584, mRNA (cDNA clone MGC:92584 IMAGE:5913089),
           complete cds
          Length = 2615

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 572 caaatttgggcccaatatcac 592
           |||||||||||||||||||||
Sbjct: 758 caaatttgggcccaatatcac 738
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>gb|AC110814.5| Homo sapiens BAC clone RP11-1338A7 from 4, complete sequence
          Length = 137723

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 231    accttatttttaggctctgagttaa 255
              |||||||||||| ||||||||||||
Sbjct: 116561 accttatttttaagctctgagttaa 116537
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>ref|NM_001005933.1| Danio rerio zgc:92584 (zgc:92584), mRNA
          Length = 2615

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 572 caaatttgggcccaatatcac 592
           |||||||||||||||||||||
Sbjct: 758 caaatttgggcccaatatcac 738
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>gb|BC097101.1| Danio rerio zgc:92584, mRNA (cDNA clone MGC:114033 IMAGE:7215242),
           complete cds
          Length = 2590

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 572 caaatttgggcccaatatcac 592
           |||||||||||||||||||||
Sbjct: 736 caaatttgggcccaatatcac 716
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                    
Query: 442     gcacaagcaccagtcccacaagcaagagttgctccagcaccgcgctcccaaac 494
               ||||| ||||| ||||||||||| || ||||| || || || |||||||||||
Sbjct: 1441445 gcacaggcacccgtcccacaagccagcgttgcccctgctccccgctcccaaac 1441497



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 649     caatgaggattgcccatgct 668
               ||||||||||||||||||||
Sbjct: 1441643 caatgaggattgcccatgct 1441662
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>gb|AC107666.13| Mus musculus chromosome 5, clone RP23-111M3, complete sequence
          Length = 230189

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 518    acaagacctgtacaaactcag 538
              |||||||||||||||||||||
Sbjct: 162858 acaagacctgtacaaactcag 162838
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>gb|AC008221.5| Drosophila melanogaster clone BACR30B13, complete sequence
          Length = 184278

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 425    cagctgcaacaacaactgca 444
              ||||||||||||||||||||
Sbjct: 137055 cagctgcaacaacaactgca 137036
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>gb|AC110812.4| Homo sapiens BAC clone RP11-813J18 from 4, complete sequence
          Length = 61635

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 346  ttatcctccctccattcaat 365
            ||||||||||||||||||||
Sbjct: 2132 ttatcctccctccattcaat 2113
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>gb|AC117215.3| Mus musculus BAC clone RP23-308M1 from 7, complete sequence
          Length = 192092

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 105    aaaaggttaaaatgtaaagtacac 128
              |||| |||||||||||||||||||
Sbjct: 171415 aaaatgttaaaatgtaaagtacac 171392
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>gb|AY225624.1| Uncultured epsilon proteobacterium clone AT-pp27 16S ribosomal RNA
           gene, partial sequence
          Length = 1428

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 381 aggcaaatcaactatacatt 400
           ||||||||||||||||||||
Sbjct: 107 aggcaaatcaactatacatt 88
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>emb|AL592148.7| Human DNA sequence from clone RP11-378J18 on chromosome 1 Contains the
             gene for a novel protein (FLJ13840), the TAF1A gene for
             TATA box binding protein (TBP)-associated factor, RNA
             polymerase I, A, 48kDa, two novel genes, the gene for
             C219-reactive peptide (FLJ39207), the 3' of the gene for a
             novel protein (FLJ12806) and a CpG island, complete
             sequence
          Length = 194034

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 581   gcccaatatcactaagcttcagat 604
             |||||||||| |||||||||||||
Sbjct: 37060 gcccaatatctctaagcttcagat 37083
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>emb|AL356321.9| Human DNA sequence from clone RP11-282M24 on chromosome 13, complete
             sequence
          Length = 162441

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 580   ggcccaatatcactaagcttcaga 603
             ||||||||||||||| ||||||||
Sbjct: 86486 ggcccaatatcactacgcttcaga 86463
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>emb|BX323861.10| Zebrafish DNA sequence from clone CH211-209F23 in linkage group 2,
              complete sequence
          Length = 173663

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    aaaaggttaaaatgtaaagt 124
              ||||||||||||||||||||
Sbjct: 100535 aaaaggttaaaatgtaaagt 100554
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>emb|AL935302.7| Zebrafish DNA sequence from clone DKEY-13N1 in linkage group 15,
             complete sequence
          Length = 152706

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   ctgcaacaacaactgcacaa 447
             ||||||||||||||||||||
Sbjct: 97517 ctgcaacaacaactgcacaa 97498
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>gb|L77616.1| Oryza sativa dihydrodipicolinate synthase gene, complete cds
          Length = 3116

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 348  atcctccctccattcaattt 367
            ||||||||||||||||||||
Sbjct: 1179 atcctccctccattcaattt 1198
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 348      atcctccctccattcaattt 367
                ||||||||||||||||||||
Sbjct: 28906900 atcctccctccattcaattt 28906881
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>dbj|BS000166.1| Pan troglodytes chromosome 22 clone:RP43-094M15, map 22, complete
             sequences
          Length = 158730

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 561   ttcatgatgctcaaatttgg 580
             ||||||||||||||||||||
Sbjct: 77207 ttcatgatgctcaaatttgg 77226
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>emb|BX005052.6| Zebrafish DNA sequence from clone CH211-42O7 in linkage group 15,
             complete sequence
          Length = 177681

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 428   ctgcaacaacaactgcacaa 447
             ||||||||||||||||||||
Sbjct: 67265 ctgcaacaacaactgcacaa 67284
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>gb|AE003777.3| Drosophila melanogaster chromosome 3R, section 115 of 118 of the complete
              sequence
          Length = 232290

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 425    cagctgcaacaacaactgca 444
              ||||||||||||||||||||
Sbjct: 167280 cagctgcaacaacaactgca 167261
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>dbj|AP002958.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-16H7, complete
             sequence
          Length = 72000

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 344   tgttatcctccctccattcaattt 367
             |||| |||||||||||||||||||
Sbjct: 19993 tgttttcctccctccattcaattt 20016
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>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12
          Length = 144628

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                          
Query: 409    gctcggccctcaagaacagctgcaacaacaactgcacaagcaccagtcccacaagcaaga 468
              ||||| || ||||| || ||||||||||| |  |||||||| ||||| ||||| || | |
Sbjct: 107115 gctcgaccttcaaggactgctgcaacaaccagagcacaagctccagttccacaggccaaa 107056

                      
Query: 469    gttgctcc 476
              ||||||||
Sbjct: 107055 gttgctcc 107048
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>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04,
              complete sequence
          Length = 154865

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 348    atcctccctccattcaattt 367
              ||||||||||||||||||||
Sbjct: 119062 atcctccctccattcaattt 119043
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>gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complete sequence
          Length = 232568

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 105    aaaaggttaaaatgtaaagtacac 128
              |||| |||||||||||||||||||
Sbjct: 114456 aaaatgttaaaatgtaaagtacac 114433
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>gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, complete sequence
          Length = 194167

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 105    aaaaggttaaaatgtaaagtacac 128
              |||| |||||||||||||||||||
Sbjct: 150193 aaaatgttaaaatgtaaagtacac 150170
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>gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome
          Length = 1197687

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 258    aaacccttccatcttcgtcc 277
              ||||||||||||||||||||
Sbjct: 504572 aaacccttccatcttcgtcc 504553
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>gb|DQ228581.1| Uncultured bacterium clone LC1149b9 16S ribosomal RNA gene, partial
           sequence
          Length = 711

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 381 aggcaaatcaactatacatt 400
           ||||||||||||||||||||
Sbjct: 107 aggcaaatcaactatacatt 88
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>dbj|AB055342.1| Macaca fascicularis brain cDNA, clone:QflA-11322
          Length = 2182

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 212 caggaaagtggtttgagaga 231
           ||||||||||||||||||||
Sbjct: 157 caggaaagtggtttgagaga 138


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,277,872
Number of Sequences: 3902068
Number of extensions: 5277872
Number of successful extensions: 96680
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96474
Number of HSP's gapped (non-prelim): 205
length of query: 694
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 671
effective length of database: 17,143,297,704
effective search space: 11503152759384
effective search space used: 11503152759384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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