| Clone Name | rbags6e05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467861.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1983 Score = 335 bits (169), Expect = 1e-88 Identities = 256/285 (89%) Strand = Plus / Minus Query: 430 ggcttctgacaaaccaacagcttttcatcactagctatgtcaagatccaatatgcgggca 489 ||||||||||| |||| || ||||||||||||||||||||||||||||| || |||||| Sbjct: 1964 ggcttctgacagaccagaagtttttcatcactagctatgtcaagatccaaaatacgggca 1905 Query: 490 tcccatctgagctgagcagcaacagatcttgcagcttcaataagaggggccgtgtcacgt 549 ||||| |||||||| | ||||||||||||||||||||||||||||||| |||||||| Sbjct: 1904 tcccacctgagctgtgttacaacagatcttgcagcttcaataagaggggcagtgtcacgg 1845 Query: 550 attatgatccagccctctggtcgtactatgcgatcaacttccaagaaaatgtcaagagta 609 ||||| | ||| |||||||| |||| |||||||||||||||||||| || ||||||||| Sbjct: 1844 attataacccaaccctctggacgtaggatgcgatcaacttccaagaatatatcaagagta 1785 Query: 610 gaacatctacgtttttggcgtttttcaagtgatagaaagccatcagcatgtaccatatca 669 ||||||||| | |||||| | || |||||||||||||||||||||||||| ||||||||| Sbjct: 1784 gaacatctatgcttttggtgcttctcaagtgatagaaagccatcagcatggaccatatca 1725 Query: 670 tatgttcttgggtaagttggaaatgcttcacaccagtcgtgttga 714 ||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 1724 tatgttcttggataagttggaaatgcttcacaccagtcatgttga 1680
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 184 bits (93), Expect = 3e-43 Identities = 129/141 (91%) Strand = Plus / Plus Query: 563 cctctggtcgtactatgcgatcaacttccaagaaaatgtcaagagtagaacatctacgtt 622 ||||||| |||| |||||||||||||||||||| || |||||||||||||||||| | | Sbjct: 31782957 cctctggacgtaggatgcgatcaacttccaagaatatatcaagagtagaacatctatgct 31783016 Query: 623 tttggcgtttttcaagtgatagaaagccatcagcatgtaccatatcatatgttcttgggt 682 ||||| | || |||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 31783017 tttggtgcttctcaagtgatagaaagccatcagcatggaccatatcatatgttcttggat 31783076 Query: 683 aagttggaaatgcttcacacc 703 ||||||||||||||||||||| Sbjct: 31783077 aagttggaaatgcttcacacc 31783097 Score = 145 bits (73), Expect = 2e-31 Identities = 112/125 (89%) Strand = Plus / Plus Query: 430 ggcttctgacaaaccaacagcttttcatcactagctatgtcaagatccaatatgcgggca 489 ||||||||||| |||| || ||||||||||||||||||||||||||||| || |||||| Sbjct: 31782222 ggcttctgacagaccagaagtttttcatcactagctatgtcaagatccaaaatacgggca 31782281 Query: 490 tcccatctgagctgagcagcaacagatcttgcagcttcaataagaggggccgtgtcacgt 549 ||||| |||||||| | ||||||||||||||||||||||||||||||| |||||||| Sbjct: 31782282 tcccacctgagctgtgttacaacagatcttgcagcttcaataagaggggcagtgtcacgg 31782341 Query: 550 attat 554 ||||| Sbjct: 31782342 attat 31782346 Score = 113 bits (57), Expect = 8e-22 Identities = 160/192 (83%), Gaps = 8/192 (4%) Strand = Plus / Plus Query: 164 cctggcagtaaaaccttggcctggaaagcttagccaccaagcctgtcctcctccgcagca 223 ||||||| |||||||| ||||||||||||||||| |||| |||| ||| |||||| Sbjct: 31781965 cctggcaataaaacctcggcctggaaagcttagctaccaggcct------ctctgcagca 31782018 Query: 224 tgcacttgcccgatcagtctcatggcaccttgcggc-ccatgacgattcatgacgagtta 282 ||||||| |||||||||| |||||||||||||| |||||||||| |||||||||||| Sbjct: 31782019 cgcacttgtccgatcagtccaatggcaccttgcggttccatgacgatgcatgacgagtta 31782078 Query: 283 gctgacccattcctccagtgtttcaactgaaatctcttctcagttgttctcggataatac 342 ||||| |||| |||| |||||| ||||||| ||| |||||| |||||| ||| |||| Sbjct: 31782079 gctga-ccatgcctctagtgttgaaactgaattctgttctcaactgttcttggacaatag 31782137 Query: 343 gtgtaacagtat 354 | ||||||||| Sbjct: 31782138 ttttaacagtat 31782149 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Plus Query: 52 aattatacctatatgacacattggccgcgattatgtacgccgcagcatcatccctttatt 111 ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 31781852 aattatacctatatggcacattggccgcgattatgtacaccgcagcatcatccctttatt 31781911 Query: 112 aaatatat 119 ||||||| Sbjct: 31781912 gaatatat 31781919
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 184 bits (93), Expect = 3e-43 Identities = 129/141 (91%) Strand = Plus / Plus Query: 563 cctctggtcgtactatgcgatcaacttccaagaaaatgtcaagagtagaacatctacgtt 622 ||||||| |||| |||||||||||||||||||| || |||||||||||||||||| | | Sbjct: 78755 cctctggacgtaggatgcgatcaacttccaagaatatatcaagagtagaacatctatgct 78814 Query: 623 tttggcgtttttcaagtgatagaaagccatcagcatgtaccatatcatatgttcttgggt 682 ||||| | || |||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 78815 tttggtgcttctcaagtgatagaaagccatcagcatggaccatatcatatgttcttggat 78874 Query: 683 aagttggaaatgcttcacacc 703 ||||||||||||||||||||| Sbjct: 78875 aagttggaaatgcttcacacc 78895 Score = 145 bits (73), Expect = 2e-31 Identities = 112/125 (89%) Strand = Plus / Plus Query: 430 ggcttctgacaaaccaacagcttttcatcactagctatgtcaagatccaatatgcgggca 489 ||||||||||| |||| || ||||||||||||||||||||||||||||| || |||||| Sbjct: 78020 ggcttctgacagaccagaagtttttcatcactagctatgtcaagatccaaaatacgggca 78079 Query: 490 tcccatctgagctgagcagcaacagatcttgcagcttcaataagaggggccgtgtcacgt 549 ||||| |||||||| | ||||||||||||||||||||||||||||||| |||||||| Sbjct: 78080 tcccacctgagctgtgttacaacagatcttgcagcttcaataagaggggcagtgtcacgg 78139 Query: 550 attat 554 ||||| Sbjct: 78140 attat 78144 Score = 113 bits (57), Expect = 8e-22 Identities = 160/192 (83%), Gaps = 8/192 (4%) Strand = Plus / Plus Query: 164 cctggcagtaaaaccttggcctggaaagcttagccaccaagcctgtcctcctccgcagca 223 ||||||| |||||||| ||||||||||||||||| |||| |||| ||| |||||| Sbjct: 77763 cctggcaataaaacctcggcctggaaagcttagctaccaggcct------ctctgcagca 77816 Query: 224 tgcacttgcccgatcagtctcatggcaccttgcggc-ccatgacgattcatgacgagtta 282 ||||||| |||||||||| |||||||||||||| |||||||||| |||||||||||| Sbjct: 77817 cgcacttgtccgatcagtccaatggcaccttgcggttccatgacgatgcatgacgagtta 77876 Query: 283 gctgacccattcctccagtgtttcaactgaaatctcttctcagttgttctcggataatac 342 ||||| |||| |||| |||||| ||||||| ||| |||||| |||||| ||| |||| Sbjct: 77877 gctga-ccatgcctctagtgttgaaactgaattctgttctcaactgttcttggacaatag 77935 Query: 343 gtgtaacagtat 354 | ||||||||| Sbjct: 77936 ttttaacagtat 77947 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Plus Query: 52 aattatacctatatgacacattggccgcgattatgtacgccgcagcatcatccctttatt 111 ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 77650 aattatacctatatggcacattggccgcgattatgtacaccgcagcatcatccctttatt 77709 Query: 112 aaatatat 119 ||||||| Sbjct: 77710 gaatatat 77717
>ref|NM_106474.4| Arabidopsis thaliana unknown protein AT1G78240 mRNA, complete cds Length = 2760 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 655 gcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacaccagt 706 |||||||||| ||||||||||| |||||||| || |||| ||||||||||| Sbjct: 2163 gcatgtaccaggtcatatgttctcgggtaagtcgggaatggttcacaccagt 2112
>gb|AF360139.1| Arabidopsis thaliana At1g78240 mRNA sequence Length = 2832 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 655 gcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacaccagt 706 |||||||||| ||||||||||| |||||||| || |||| ||||||||||| Sbjct: 2227 gcatgtaccaggtcatatgttctcgggtaagtcgggaatggttcacaccagt 2176
>emb|BX814932.1|CNS0ADZ2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS19ZG05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2709 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 655 gcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacaccagt 706 |||||||||| ||||||||||| |||||||| || |||| ||||||||||| Sbjct: 2160 gcatgtaccaggtcatatgttctcgggtaagtcgggaatggttcacaccagt 2109
>gb|BT014522.1| Lycopersicon esculentum clone 133918F, mRNA sequence Length = 2199 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 666 atcatatgttcttgggtaagttggaaatgcttcacaccagtc 707 ||||||||| |||||||| || | |||||||||||||||||| Sbjct: 1606 atcatatgtccttgggtatgtagaaaatgcttcacaccagtc 1565
>gb|AC012680.5|AC012680 Arabidopsis thaliana chromosome 1 BAC T11I11 genomic sequence, complete sequence Length = 69506 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Plus Query: 655 gcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||||||| ||||||||||| |||||||| || |||| |||||||| Sbjct: 68268 gcatgtaccaggtcatatgttctcgggtaagtcgggaatggttcacacc 68316
>gb|AC013430.5|AC013430 Genomic sequence for Arabidopsis thaliana BAC F3F9 from chromosome I, complete sequence Length = 95769 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 655 gcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||||||| ||||||||||| |||||||| || |||| |||||||| Sbjct: 92930 gcatgtaccaggtcatatgttctcgggtaagtcgggaatggttcacacc 92882
>dbj|AK121243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099B06, full insert sequence Length = 2310 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 667 tcatatgttcttgggtaagttggaaatgcttcacaccagtc 707 |||||||||||||||||||| | ||||| ||||||||||| Sbjct: 1752 tcatatgttcttgggtaagtggagaatgcctcacaccagtc 1712
>gb|AY874639.1| Pinus taeda isolate FBRC32 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874638.1| Pinus taeda isolate FBRC31 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874637.1| Pinus taeda isolate FBRC30 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874636.1| Pinus taeda isolate FBRC29 early response to drought 3 (erd3) gene, partial cds Length = 878 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874635.1| Pinus taeda isolate FBRC28 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874634.1| Pinus taeda isolate FBRC27 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874633.1| Pinus taeda isolate FBRC26 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874632.1| Pinus taeda isolate FBRC25 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874631.1| Pinus taeda isolate FBRC24 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874630.1| Pinus taeda isolate FBRC23 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874629.1| Pinus taeda isolate FBRC22 early response to drought 3 (erd3) gene, partial cds Length = 878 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874628.1| Pinus taeda isolate FBRC21 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874627.1| Pinus taeda isolate FBRC20 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874626.1| Pinus taeda isolate FBRC19 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874625.1| Pinus taeda isolate FBRC18 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874624.1| Pinus taeda isolate FBRC17 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874623.1| Pinus taeda isolate FBRC16 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874622.1| Pinus taeda isolate FBRC15 early response to drought 3 (erd3) gene, partial cds Length = 878 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874621.1| Pinus taeda isolate FBRC14 early response to drought 3 (erd3) gene, partial cds Length = 878 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874620.1| Pinus taeda isolate FBRC13 early response to drought 3 (erd3) gene, partial cds Length = 878 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874619.1| Pinus taeda isolate FBRC12 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874618.1| Pinus taeda isolate FBRC11 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874617.1| Pinus taeda isolate FBRC10 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874616.1| Pinus taeda isolate FBRC9 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874615.1| Pinus taeda isolate FBRC8 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874614.1| Pinus taeda isolate FBRC7 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874613.1| Pinus taeda isolate FBRC6 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874612.1| Pinus taeda isolate FBRC5 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874611.1| Pinus taeda isolate FBRC4 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874610.1| Pinus taeda isolate FBRC3 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874609.1| Pinus taeda isolate FBRC2 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AY874608.1| Pinus taeda isolate FBRC1 early response to drought 3 (erd3) gene, partial cds Length = 882 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||| |||||| | ||||||||||||||| || |||| |||||| ||||||| Sbjct: 464 ccatcaacatgtaggagatcatatgttcttggataggttgaaaatgcctcacacc 410
>gb|AC146752.24| Medicago truncatula clone mth2-62d4, complete sequence Length = 130134 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Plus Query: 654 agcatgtaccatatcatatgttcttgggtaagttg 688 |||||||| || |||||||||||||||||||||| Sbjct: 26633 agcatgtatcaagtcatatgttcttgggtaagttg 26667
>ref|NM_106375.1| Arabidopsis thaliana unknown protein AT1G77260 mRNA, complete cds Length = 2415 Score = 44.1 bits (22), Expect = 0.63 Identities = 49/58 (84%) Strand = Plus / Minus Query: 653 cagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacaccagtcgtg 710 ||||||||| || |||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 1999 cagcatgtatcagatcataggttcttgggtaggtgtcaaatggctcacaccagtcgtg 1942
>ref|NM_117913.3| Arabidopsis thaliana unknown protein AT4G18030 mRNA, complete cds Length = 2345 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 670 tatgttcttgggtaagttggaaatgcttcacaccagtc 707 ||||||||||| ||||||| ||| ||||||||||||| Sbjct: 1696 tatgttcttggataagttgaaaagccttcacaccagtc 1659
>ref|XM_519496.1| PREDICTED: Pan troglodytes LOC463861 (LOC463861), mRNA Length = 3245 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 309 ctgaaatctcttctcagttgtt 330 |||||||||||||||||||||| Sbjct: 2446 ctgaaatctcttctcagttgtt 2467
>gb|AC151802.1| Solanum tuberosum chromosome 5 clone PGEC46 map MAP_LOC, complete sequence Length = 43509 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Plus Query: 666 atcatatgttcttgggtaagttggaaatgcttcacacc 703 ||||||||| |||||||| || | |||||||||||||| Sbjct: 956 atcatatgtccttgggtatgtagaaaatgcttcacacc 993
>gb|AC149291.1| Solanum demissum chromosome 5 clone PGEC568H16 map MAP_LOC, complete sequence Length = 146091 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 666 atcatatgttcttgggtaagttggaaatgcttcacacc 703 ||||||||| |||||||| || | |||||||||||||| Sbjct: 101627 atcatatgtccttgggtatgtagaaaatgcttcacacc 101590
>gb|AC149267.1| Solanum demissum chromosome 5 clone PGEC747E24 map MAP_LOC, complete sequence Length = 92340 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Plus Query: 666 atcatatgttcttgggtaagttggaaatgcttcacacc 703 ||||||||| |||||||| || | |||||||||||||| Sbjct: 88218 atcatatgtccttgggtatgtagaaaatgcttcacacc 88255
>gb|AC149287.1| Solanum demissum chromosome 5 clone PGEC568D21 map MAP_LOC, complete sequence Length = 119525 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Plus Query: 666 atcatatgttcttgggtaagttggaaatgcttcacacc 703 ||||||||| |||||||| || | |||||||||||||| Sbjct: 1100 atcatatgtccttgggtatgtagaaaatgcttcacacc 1137
>gb|AC144791.1| Solanum demissum chromosome 5 BAC PGEC668E02 genomic sequence, complete sequence Length = 142575 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 666 atcatatgttcttgggtaagttggaaatgcttcacacc 703 ||||||||| |||||||| || | |||||||||||||| Sbjct: 44539 atcatatgtccttgggtatgtagaaaatgcttcacacc 44502
>gb|AC145900.3| Pan troglodytes BAC clone RP43-40I9 from 7, complete sequence Length = 160229 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 309 ctgaaatctcttctcagttgtt 330 |||||||||||||||||||||| Sbjct: 34587 ctgaaatctcttctcagttgtt 34608
>gb|AC142096.25| Medicago truncatula clone mth2-6m16, complete sequence Length = 129053 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Plus Query: 666 atcatatgttcttgggtaagttggaaatgcttcacacc 703 ||||||||||| ||||| |||| |||||||||||||| Sbjct: 57911 atcatatgttcgggggtatgttgaaaatgcttcacacc 57948
>gb|AC142507.13| Medicago truncatula clone mth2-30h19, complete sequence Length = 117666 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 666 atcatatgttcttgggtaagttggaaatgcttcacacc 703 ||||||||||| ||||| |||| |||||||||||||| Sbjct: 93745 atcatatgttcgggggtatgttgaaaatgcttcacacc 93708
>ref|NM_000108.3| Homo sapiens dihydrolipoamide dehydrogenase (E3 component of pyruvate dehydrogenase complex, 2-oxo-glutarate complex, branched chain keto acid dehydrogenase complex) (DLD), mRNA Length = 3579 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 309 ctgaaatctcttctcagttgtt 330 |||||||||||||||||||||| Sbjct: 2910 ctgaaatctcttctcagttgtt 2931
>gb|AY093963.1| Arabidopsis thaliana At1g77260/T14N5_19 mRNA, complete cds Length = 1968 Score = 44.1 bits (22), Expect = 0.63 Identities = 49/58 (84%) Strand = Plus / Minus Query: 653 cagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacaccagtcgtg 710 ||||||||| || |||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 1741 cagcatgtatcagatcataggttcttgggtaggtgtcaaatggctcacaccagtcgtg 1684
>gb|AF410264.1|AF410264 Arabidopsis thaliana AT4g18030/T6K21_210 mRNA, complete cds Length = 2320 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 670 tatgttcttgggtaagttggaaatgcttcacaccagtc 707 ||||||||||| ||||||| ||| ||||||||||||| Sbjct: 1699 tatgttcttggataagttgaaaagccttcacaccagtc 1662
>gb|AF367259.1|AF367259 Arabidopsis thaliana At1g77260/T14N5_19 mRNA, complete cds Length = 2418 Score = 44.1 bits (22), Expect = 0.63 Identities = 49/58 (84%) Strand = Plus / Minus Query: 653 cagcatgtaccatatcatatgttcttgggtaagttggaaatgcttcacaccagtcgtg 710 ||||||||| || |||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 2001 cagcatgtatcagatcataggttcttgggtaggtgtcaaatggctcacaccagtcgtg 1944
>gb|AC005046.3|AC005046 Homo sapiens BAC clone CTB-13F3 from 7q22, complete sequence Length = 219436 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 309 ctgaaatctcttctcagttgtt 330 |||||||||||||||||||||| Sbjct: 138339 ctgaaatctcttctcagttgtt 138360
>gb|BT001149.1| Arabidopsis thaliana At4g18030/T6K21_210 mRNA, complete cds Length = 1866 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 670 tatgttcttgggtaagttggaaatgcttcacaccagtc 707 ||||||||||| ||||||| ||| ||||||||||||| Sbjct: 1565 tatgttcttggataagttgaaaagccttcacaccagtc 1528
>ref|NM_179405.2| Arabidopsis thaliana unknown protein AT1G31850 transcript variant AT1G31850.2 mRNA, complete cds Length = 2204 Score = 42.1 bits (21), Expect = 2.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 666 atcatatgttcttgggtaagttggaaatgcttcacaccagtcgtg 710 ||||||||||||||| || |||| || ||||| ||||||||||| Sbjct: 1695 atcatatgttcttggatacgttgagaaagcttcgcaccagtcgtg 1651
>ref|NM_202220.1| Arabidopsis thaliana unknown protein AT1G31850 transcript variant AT1G31850.3 mRNA, complete cds Length = 2258 Score = 42.1 bits (21), Expect = 2.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 666 atcatatgttcttgggtaagttggaaatgcttcacaccagtcgtg 710 ||||||||||||||| || |||| || ||||| ||||||||||| Sbjct: 1749 atcatatgttcttggatacgttgagaaagcttcgcaccagtcgtg 1705
>ref|NM_102922.3| Arabidopsis thaliana unknown protein AT1G31850 transcript variant AT1G31850.1 mRNA, complete cds Length = 2313 Score = 42.1 bits (21), Expect = 2.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 666 atcatatgttcttgggtaagttggaaatgcttcacaccagtcgtg 710 ||||||||||||||| || |||| || ||||| ||||||||||| Sbjct: 1804 atcatatgttcttggatacgttgagaaagcttcgcaccagtcgtg 1760
>ref|NM_116300.2| Arabidopsis thaliana unknown protein AT4G00750 mRNA, complete cds Length = 1954 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 670 tatgttcttgggtaagttggaaatgcttcacaccagt 706 ||||| ||||||||||||| | |||||||||||||| Sbjct: 1674 tatgtccttgggtaagttgacattgcttcacaccagt 1638
>gb|AC006835.1| Caenorhabditis elegans cosmid ZK993, complete sequence Length = 32557 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 aaatatatggttttgctacaaaatt 136 |||||||| |||||||||||||||| Sbjct: 3878 aaatatatagttttgctacaaaatt 3902
>gb|AF083759.1| Arabidopsis thaliana clone sps626 unknown mRNA Length = 2129 Score = 42.1 bits (21), Expect = 2.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 666 atcatatgttcttgggtaagttggaaatgcttcacaccagtcgtg 710 ||||||||||||||| || |||| || ||||| ||||||||||| Sbjct: 1714 atcatatgttcttggatacgttgagaaagcttcgcaccagtcgtg 1670
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 667 tcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||||||||||||||||| | ||||| ||||||| Sbjct: 63524 tcatatgttcttgggtaagtggagaatgcctcacacc 63560
>emb|AL645944.11| Human DNA sequence from clone RP11-179G8 on chromosome 1, complete sequence Length = 191247 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 cctttattaaatatatggttt 124 ||||||||||||||||||||| Sbjct: 68350 cctttattaaatatatggttt 68370
>gb|BT000825.1| Arabidopsis thaliana unknown protein (At1g31850/68069_m00154) mRNA, complete cds Length = 1812 Score = 42.1 bits (21), Expect = 2.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 666 atcatatgttcttgggtaagttggaaatgcttcacaccagtcgtg 710 ||||||||||||||| || |||| || ||||| ||||||||||| Sbjct: 1551 atcatatgttcttggatacgttgagaaagcttcgcaccagtcgtg 1507
>gb|BT000539.1| Arabidopsis thaliana unknown protein (At4g00750/F15P23_1) mRNA, complete cds Length = 453 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 670 tatgttcttgggtaagttggaaatgcttcacaccagt 706 ||||| ||||||||||||| | |||||||||||||| Sbjct: 173 tatgtccttgggtaagttgacattgcttcacaccagt 137
>gb|AY128291.1| Arabidopsis thaliana At1g31850/68069_m00154 mRNA, complete cds Length = 2165 Score = 42.1 bits (21), Expect = 2.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 666 atcatatgttcttgggtaagttggaaatgcttcacaccagtcgtg 710 ||||||||||||||| || |||| || ||||| ||||||||||| Sbjct: 1695 atcatatgttcttggatacgttgagaaagcttcgcaccagtcgtg 1651
>gb|AY058882.1| Arabidopsis thaliana AT4g00750/F15P23_1 mRNA, complete cds Length = 977 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 670 tatgttcttgggtaagttggaaatgcttcacaccagt 706 ||||| ||||||||||||| | |||||||||||||| Sbjct: 529 tatgtccttgggtaagttgacattgcttcacaccagt 493
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 667 tcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||||||||||||||||| | ||||| ||||||| Sbjct: 22277774 tcatatgttcttgggtaagtggagaatgcctcacacc 22277738
>dbj|AK102287.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089J21, full insert sequence Length = 2371 Score = 42.1 bits (21), Expect = 2.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 666 atcatatgttcttgggtaagttggaaatgcttcacaccagtcgtg 710 |||||| |||||||||||||| | || ||||| ||||||||||| Sbjct: 1826 atcatacgttcttgggtaagtagagaaagcttcgcaccagtcgtg 1782
>gb|AC103618.6| Mus musculus chromosome 1, clone RP24-202B6, complete sequence Length = 141016 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 588 ttccaagaaaatgtcaagagt 608 ||||||||||||||||||||| Sbjct: 9831 ttccaagaaaatgtcaagagt 9811
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 667 tcatatgttcttgggtaagttggaaatgcttcacacc 703 |||||||||||||||||||| | ||||| ||||||| Sbjct: 22587685 tcatatgttcttgggtaagtggagaatgcctcacacc 22587649
>gb|BC086718.1| Danio rerio fibroblast growth factor 8, mRNA (cDNA clone MGC:101652 IMAGE:7226279), complete cds Length = 2146 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 ctgagcagcaacagatcttg 520 |||||||||||||||||||| Sbjct: 305 ctgagcagcaacagatcttg 324
>ref|XM_510456.1| PREDICTED: Pan troglodytes similar to NMDA receptor-regulated gene 2 (LOC453489), mRNA Length = 3459 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatc 668 |||||||||||||||||||| Sbjct: 1915 ccatcagcatgtaccatatc 1896
>gb|AE014828.1| Plasmodium falciparum 3D7 chromosome 14 section 13 of 13 of the complete sequence Length = 273275 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 tacgtttttggcgtttttca 636 |||||||||||||||||||| Sbjct: 254414 tacgtttttggcgtttttca 254395
>gb|AC114512.5| Rattus norvegicus 5 BAC CH230-5N9 (Children's Hospital Oakland Research Institute) complete sequence Length = 247588 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 tcaacttccaagaaaatgtc 602 |||||||||||||||||||| Sbjct: 151457 tcaacttccaagaaaatgtc 151438
>ref|XM_416648.1| PREDICTED: Gallus gallus similar to CDNA sequence BC043118 (LOC418437), partial mRNA Length = 9238 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 418 tttttcagaaagggcttctgacaaacca 445 |||||||||||| |||||||||| |||| Sbjct: 2946 tttttcagaaagagcttctgacatacca 2919
>ref|XM_456752.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0A09933g) partial mRNA Length = 1398 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 atctcttctcagttgttctc 333 |||||||||||||||||||| Sbjct: 672 atctcttctcagttgttctc 653
>ref|NM_131281.2| Danio rerio fibroblast growth factor 8 (fgf8), mRNA Length = 2146 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 ctgagcagcaacagatcttg 520 |||||||||||||||||||| Sbjct: 305 ctgagcagcaacagatcttg 324
>gb|AC121816.3| Mus musculus BAC clone RP23-458H21 from chromosome 3, complete sequence Length = 173593 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 tttattaaatatatggtttt 125 |||||||||||||||||||| Sbjct: 12048 tttattaaatatatggtttt 12029
>gb|AC162931.4| Mus musculus BAC clone RP23-213P10 from chromosome 9, complete sequence Length = 204861 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 629 gtttttcaagtgatagaaag 648 |||||||||||||||||||| Sbjct: 31290 gtttttcaagtgatagaaag 31271
>emb|AL606515.4| Human DNA sequence from clone RP11-575K24 on chromosome X, complete sequence Length = 39017 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 atccctttattaaatatatggttt 124 |||||||||| ||||||||||||| Sbjct: 14614 atccctttatcaaatatatggttt 14637
>emb|AL450382.7| Human DNA sequence from clone RP11-56A21 on chromosome 10 Contains part of gene FLJ10824, a solute carrier family 9 (sodium/hydrogen exchanger) isoform 5 (SLC9A5) pseudogene, the ASAH2 gene for N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 and a dynein cytoplasmic intermediate polypeptide 2 (DNCI2) pseudogene, complete sequence Length = 162228 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 gggatcaagaataattccaa 378 |||||||||||||||||||| Sbjct: 158981 gggatcaagaataattccaa 159000
>emb|AL391499.11| Human DNA sequence from clone RP11-162E8 on chromosome 10 Contains part of a novel gene (DKFZp761L0424) (KIAA1217), complete sequence Length = 144750 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 tccctttattaaatatatggtttt 125 ||||||||| |||||||||||||| Sbjct: 101925 tccctttatcaaatatatggtttt 101948
>emb|AL133465.30| Human DNA sequence from clone RP5-1177M21 on chromosome 20 Contains a putative novel gene, ESTs, STSs, GSSs and a CpG island, complete sequence Length = 88058 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 643 agaaagccatcagcatgtac 662 |||||||||||||||||||| Sbjct: 66120 agaaagccatcagcatgtac 66139
>emb|AL078623.28|HSJ1069C8 Human DNA sequence from clone RP5-1069C8 on chromosome 20 Contains the 3' end of a novel gene, a novel gene and a CpG island, complete sequence Length = 177102 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ctttattaaatatatggttt 124 |||||||||||||||||||| Sbjct: 58984 ctttattaaatatatggttt 58965
>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces hansenii Length = 1249565 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 atctcttctcagttgttctc 333 |||||||||||||||||||| Sbjct: 813784 atctcttctcagttgttctc 813765
>gb|AC152933.2| Xenopus tropicalis clone ISB1-42B12, complete sequence Length = 44689 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 atatatggttttgctacaaa 133 |||||||||||||||||||| Sbjct: 24754 atatatggttttgctacaaa 24735
>emb|CR925797.8| Zebrafish DNA sequence from clone CH211-194I8 in linkage group 13, complete sequence Length = 65727 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 ctgagcagcaacagatcttg 520 |||||||||||||||||||| Sbjct: 48859 ctgagcagcaacagatcttg 48840
>emb|CR860077.1| Pongo pygmaeus mRNA; cDNA DKFZp469L1225 (from clone DKFZp469L1225) Length = 3355 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 649 ccatcagcatgtaccatatc 668 |||||||||||||||||||| Sbjct: 1664 ccatcagcatgtaccatatc 1645
>gb|AC104637.5| Homo sapiens 3 BAC RP11-387L24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 99960 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ttagccaccaagcctgtcct 212 |||||||||||||||||||| Sbjct: 75835 ttagccaccaagcctgtcct 75854 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 608 tagaacatctacgtttttgg 627 |||||||||||||||||||| Sbjct: 43680 tagaacatctacgtttttgg 43661
>gb|AC112645.3| Homo sapiens 3 BAC RP11-100J1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 46996 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 608 tagaacatctacgtttttgg 627 |||||||||||||||||||| Sbjct: 1443 tagaacatctacgtttttgg 1462
>gb|AC091577.9| Homo sapiens chromosome 18, clone RP11-704J2, complete sequence Length = 158840 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 attattttttcagaaagggc 432 |||||||||||||||||||| Sbjct: 38097 attattttttcagaaagggc 38116
>ref|XM_680673.1| PREDICTED: Danio rerio similar to Ras association and pleckstrin homology domains 1 isoform 2 (LOC557587), mRNA Length = 933 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ctgtcctcctccgcagcatg 225 |||||||||||||||||||| Sbjct: 104 ctgtcctcctccgcagcatg 85
>emb|BX323555.10| Zebrafish DNA sequence from clone DKEY-163M14 in linkage group 21, complete sequence Length = 180416 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 tcttggtatgctcattattt 419 |||||||||||||||||||| Sbjct: 146816 tcttggtatgctcattattt 146797
>gb|AC006590.11|AC006590 Drosophila melanogaster, chromosome 2L, region 36E-, BAC clone BACR13N02, complete sequence Length = 172479 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 tttcaactgaaatctcttct 322 |||||||||||||||||||| Sbjct: 48667 tttcaactgaaatctcttct 48686
>gb|AC008184.4|AC008184 Drosophila melanogaster, chromosome 2L, region 36E5-36F2, BAC clone BACR04D05, complete sequence Length = 154730 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 tttcaactgaaatctcttct 322 |||||||||||||||||||| Sbjct: 126188 tttcaactgaaatctcttct 126207
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ttaaatatatggttttgcta 129 |||||||||||||||||||| Sbjct: 5272323 ttaaatatatggttttgcta 5272304
>gb|AF474960.1| Bactrocera tau strain Dhsc70 70 kDa heat shock protein (hsc1) gene, partial cds Length = 664 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 gagcagcaacagatcttgca 522 |||||||||||||||||||| Sbjct: 453 gagcagcaacagatcttgca 434
>gb|AF474949.1| Bactrocera tau strain Arbhsc70 70 kDa heat shock protein (hsc1) gene, partial cds Length = 664 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 gagcagcaacagatcttgca 522 |||||||||||||||||||| Sbjct: 453 gagcagcaacagatcttgca 434
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 683 aagttggaaatgcttcacac 702 |||||||||||||||||||| Sbjct: 1611906 aagttggaaatgcttcacac 1611887
>dbj|AP005739.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0012A04 Length = 150317 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ttaaatatatggttttgcta 129 |||||||||||||||||||| Sbjct: 69036 ttaaatatatggttttgcta 69017
>dbj|AP006155.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1012G04 Length = 144644 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ttaaatatatggttttgcta 129 |||||||||||||||||||| Sbjct: 107263 ttaaatatatggttttgcta 107244
>emb|AL732334.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0323C08, complete sequence Length = 94903 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 593 agaaaatgtcaagagtagaacatc 616 ||||||||||||||| |||||||| Sbjct: 92190 agaaaatgtcaagagaagaacatc 92167
>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete sequence Length = 62215 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 593 agaaaatgtcaagagtagaacatc 616 ||||||||||||||| |||||||| Sbjct: 3951 agaaaatgtcaagagaagaacatc 3928
>gb|AE003659.2| Drosophila melanogaster chromosome 2L, section 68 of 83 of the complete sequence Length = 260027 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 tttcaactgaaatctcttct 322 |||||||||||||||||||| Sbjct: 65579 tttcaactgaaatctcttct 65598
>gb|AC147186.3| Mus musculus BAC clone RP24-112I5 from 3, complete sequence Length = 157929 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 tttattaaatatatggtttt 125 |||||||||||||||||||| Sbjct: 96248 tttattaaatatatggtttt 96229
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tatgtacgccgcagcatcat 102 |||||||||||||||||||| Sbjct: 1201513 tatgtacgccgcagcatcat 1201532 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,722,056 Number of Sequences: 3902068 Number of extensions: 6722056 Number of successful extensions: 120881 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 112 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 120502 Number of HSP's gapped (non-prelim): 377 length of query: 714 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 691 effective length of database: 17,143,297,704 effective search space: 11846018713464 effective search space used: 11846018713464 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)