ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags6d20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191661.1| Oryza sativa (japonica cultivar-group), predic... 387 e-104
2dbj|AK104463.1| Oryza sativa (japonica cultivar-group) cDNA clon... 387 e-104
3dbj|AK059962.1| Oryza sativa (japonica cultivar-group) cDNA clon... 387 e-104
4dbj|AK072746.1| Oryza sativa (japonica cultivar-group) cDNA clon... 381 e-102
5gb|AY104165.1| Zea mays PCO134015 mRNA sequence 361 2e-96
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 204 2e-49
7dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic D... 204 2e-49
8dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic D... 204 2e-49
9gb|AC182667.2| Populus trichocarpa clone Pop1-18L12, complete se... 66 1e-07
10gb|AY105301.1| Zea mays PCO100019 mRNA sequence 62 2e-06
11ref|NM_113833.2| Arabidopsis thaliana VTI13; SNARE binding / rec... 54 5e-04
12ref|NM_193510.1| Oryza sativa (japonica cultivar-group), predic... 54 5e-04
13ref|NM_193508.1| Oryza sativa (japonica cultivar-group), predic... 54 5e-04
14dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
15dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
16dbj|AK118255.1| Arabidopsis thaliana At3g29100 mRNA for putative... 54 5e-04
17dbj|AB018121.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 54 5e-04
18dbj|AK102003.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
19gb|DQ235191.1| Solanum tuberosum clone 167C07 vesicle transport ... 52 0.002
20gb|DQ191651.1| Solanum tuberosum unknown mRNA 52 0.002
21dbj|AB102768.1| Oryzias latipes plscr1, zic4, zic1 genes for pho... 46 0.13
22gb|BT013170.1| Lycopersicon esculentum clone 134237F, mRNA sequence 44 0.51
23gb|CP000097.1| Synechococcus sp. CC9902, complete genome 42 2.0
24gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
25gb|AC087041.2| Rattus norvegicus strain Brown Norway clone RP31-... 42 2.0
26gb|AC145992.2| Pan troglodytes BAC clone RP43-172K3 from 7, comp... 42 2.0
27gb|AC006451.5| Homo sapiens PAC clone RP4-562A11 from 7, complet... 42 2.0
28gb|AC119412.16| Medicago truncatula clone mth2-31d18, complete s... 42 2.0
29gb|AC096070.7| Rattus norvegicus 4 BAC CH230-20J7 (Children's Ho... 42 2.0
30dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
31gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold 42 2.0
32gb|AC159380.8| Mus musculus 10 BAC RP24-460M18 (Roswell Park Can... 42 2.0
33gb|AC132487.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
34gb|AC167976.4| Mus musculus BAC clone RP23-167L5 from chromosome... 40 8.0
35ref|XM_476215.1| Oryza sativa (japonica cultivar-group), predic... 40 8.0
36gb|CP000081.1| Leishmania major chromosome 35, complete sequence 40 8.0
37gb|AC084381.6| Homo sapiens BAC clone RP11-20K20 from 7, complet... 40 8.0
38emb|CR726422.2|CNS0GNGC Tetraodon nigroviridis full-length cDNA 40 8.0
39emb|CR725519.2|CNS0GMR9 Tetraodon nigroviridis full-length cDNA 40 8.0
40emb|CR714652.2|CNS0GEDK Tetraodon nigroviridis full-length cDNA 40 8.0
41emb|CR714556.2|CNS0GEAW Tetraodon nigroviridis full-length cDNA 40 8.0
42emb|CR709930.2|CNS0GAQE Tetraodon nigroviridis full-length cDNA 40 8.0
43emb|CR709463.2|CNS0GADF Tetraodon nigroviridis full-length cDNA 40 8.0
44emb|CR708441.2|CNS0G9L1 Tetraodon nigroviridis full-length cDNA 40 8.0
45emb|CR704236.2|CNS0G6C8 Tetraodon nigroviridis full-length cDNA 40 8.0
46emb|CR700286.2|CNS0G3AI Tetraodon nigroviridis full-length cDNA 40 8.0
47emb|CR697688.2|CNS0G1AC Tetraodon nigroviridis full-length cDNA 40 8.0
48emb|CR690633.2|CNS0FVUD Tetraodon nigroviridis full-length cDNA 40 8.0
49emb|CR689349.2|CNS0FUUP Tetraodon nigroviridis full-length cDNA 40 8.0
50emb|CR672581.2|CNS0FHXN Tetraodon nigroviridis full-length cDNA 40 8.0
51emb|CR670137.2|CNS0FG1R Tetraodon nigroviridis full-length cDNA 40 8.0
52gb|AC005588.1| Homo sapiens PAC clone RP5-1161G23 from 7, comple... 40 8.0
53emb|CR667360.1|CNS0FDWM Tetraodon nigroviridis full-length cDNA 40 8.0
54emb|CR647318.2|CNS0EYFW Tetraodon nigroviridis full-length cDNA 40 8.0
55emb|CR641428.2|CNS0ETWA Tetraodon nigroviridis full-length cDNA 40 8.0
56emb|CR634500.3|CNS0EOJU Tetraodon nigroviridis full-length cDNA 40 8.0
57emb|AL451050.8| Human DNA sequence from clone RP11-277B15 on chr... 40 8.0
58gb|AC155261.3| Mus musculus BAC clone RP24-66D10 from chromosome... 40 8.0
59gb|AC006269.13| Homo sapiens chromosome , clone RP11-515E23, com... 40 8.0
60emb|BX927159.10| Zebrafish DNA sequence from clone DKEY-17C23 in... 40 8.0
61ref|NM_001039852.1| Monodelphis domestica bitter taste receptor ... 40 8.0
62gb|AC027285.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 8.0
63gb|AC153836.5| Mus musculus 6 BAC RP23-479D21 (Roswell Park Canc... 40 8.0
64gb|AC012374.13| Homo sapiens chromosome 15 clone ctd-2287a20 map... 40 8.0
65gb|AC010999.6|AC010999 Homo sapiens chromosome 15 clone RP11-323... 40 8.0
66dbj|AK054388.1| Mus musculus 2 days pregnant adult female ovary ... 40 8.0
67gb|AC090517.2|AC090517 Homo sapiens chromosome 15 clone RP11-31H... 40 8.0
68emb|BX822946.1|CNS0A70C Arabidopsis thaliana Full-length cDNA Co... 40 8.0
69gb|AC132189.13| Mus musculus chromosome 12, clone RP24-95M20, co... 40 8.0
70gb|AC096565.1| Homo sapiens BAC clone RP11-287O8 from 2, complet... 40 8.0
71gb|AC149889.2| Xenopus tropicalis clone ISB-14A23, complete sequ... 40 8.0
72emb|BX928740.16| Zebrafish DNA sequence from clone CH211-245J22 ... 40 8.0
73emb|BX908395.15| Zebrafish DNA sequence from clone DKEY-242H9 in... 40 8.0
74gb|AC149886.2| Xenopus tropicalis clone ISB-145C16, complete seq... 40 8.0
75gb|AC102236.9| Mus musculus chromosome 7, clone RP24-100O13, com... 40 8.0
76gb|AC126685.5| Mus musculus BAC clone RP23-103I23 from chromosom... 40 8.0
77gb|AC148002.3| Mus musculus BAC clone RP23-478M1 from 18, comple... 40 8.0
78dbj|AB249765.1| Monodelphis domestica DNA for bitter taste recep... 40 8.0
79dbj|AP005136.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 8.0
80emb|AL611934.18| Mouse DNA sequence from clone RP23-472A8 on chr... 40 8.0
81emb|AL732317.13| Mouse DNA sequence from clone RP23-139F8 on chr... 40 8.0
82dbj|AP005230.2| Homo sapiens genomic DNA, chromosome 18p, clone:... 40 8.0 
>ref|NM_191661.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 666

 Score =  387 bits (195), Expect = e-104
 Identities = 297/331 (89%)
 Strand = Plus / Minus

                                                                       
Query: 255 agcgagcttaaagtagagtatgatgaggatggccacaacaagagttgaaatgattccacc 314
           ||||||||||||||| |||||||  |||||||| | |||||||| || ||| || || ||
Sbjct: 660 agcgagcttaaagtacagtatgagaaggatggctagaacaagagctgcaattatcccccc 601

                                                                       
Query: 315 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctctt 374
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 600 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttactctt 541

                                                                       
Query: 375 cccaacgttatcatcgaccccatgcaaagtatcatgagcatgcagtagtgactgccgttg 434
            ||||| |||||||| |||||||||||||||  |||||| ||||| ||||||||||||||
Sbjct: 540 gccaacattatcatcaaccccatgcaaagtagtatgagcgtgcagcagtgactgccgttg 481

                                                                       
Query: 435 ttgatgaaggtcctgaagaattgacacaccaagttcttctgtctccagcatagttcttcg 494
           ||||||||| |||||||||||||||||||||||||||||||||||||  || ||||||||
Sbjct: 480 ttgatgaagatcctgaagaattgacacaccaagttcttctgtctccaatatggttcttcg 421

                                                                       
Query: 495 gctctctttaattctgtcagtggactgattcagtcgttctgttgtcatcatcaaccttcc 554
           ||||||||||||  | ||| ||||||||||||||| |||||||||||||||||| |||||
Sbjct: 420 gctctctttaatcttatcattggactgattcagtctttctgttgtcatcatcaatcttcc 361

                                          
Query: 555 tcgctgatcagtggaaaccgcgagtgtgtca 585
            | ||||||||| ||  ||||||| ||||||
Sbjct: 360 cctctgatcagtagacgccgcgagagtgtca 330
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>dbj|AK104463.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C03, full
           insert sequence
          Length = 1092

 Score =  387 bits (195), Expect = e-104
 Identities = 297/331 (89%)
 Strand = Plus / Minus

                                                                       
Query: 255 agcgagcttaaagtagagtatgatgaggatggccacaacaagagttgaaatgattccacc 314
           ||||||||||||||| |||||||  |||||||| | |||||||| || ||| || || ||
Sbjct: 871 agcgagcttaaagtacagtatgagaaggatggctagaacaagagctgcaattatcccccc 812

                                                                       
Query: 315 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctctt 374
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 811 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttactctt 752

                                                                       
Query: 375 cccaacgttatcatcgaccccatgcaaagtatcatgagcatgcagtagtgactgccgttg 434
            ||||| |||||||| |||||||||||||||  |||||| ||||| ||||||||||||||
Sbjct: 751 gccaacattatcatcaaccccatgcaaagtagtatgagcgtgcagcagtgactgccgttg 692

                                                                       
Query: 435 ttgatgaaggtcctgaagaattgacacaccaagttcttctgtctccagcatagttcttcg 494
           ||||||||| |||||||||||||||||||||||||||||||||||||  || ||||||||
Sbjct: 691 ttgatgaagatcctgaagaattgacacaccaagttcttctgtctccaatatggttcttcg 632

                                                                       
Query: 495 gctctctttaattctgtcagtggactgattcagtcgttctgttgtcatcatcaaccttcc 554
           ||||||||||||  | ||| ||||||||||||||| |||||||||||||||||| |||||
Sbjct: 631 gctctctttaatcttatcattggactgattcagtctttctgttgtcatcatcaatcttcc 572

                                          
Query: 555 tcgctgatcagtggaaaccgcgagtgtgtca 585
            | ||||||||| ||  ||||||| ||||||
Sbjct: 571 cctctgatcagtagacgccgcgagagtgtca 541
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>dbj|AK059962.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-F05, full
           insert sequence
          Length = 1086

 Score =  387 bits (195), Expect = e-104
 Identities = 297/331 (89%)
 Strand = Plus / Minus

                                                                       
Query: 255 agcgagcttaaagtagagtatgatgaggatggccacaacaagagttgaaatgattccacc 314
           ||||||||||||||| |||||||  |||||||| | |||||||| || ||| || || ||
Sbjct: 871 agcgagcttaaagtacagtatgagaaggatggctagaacaagagctgcaattatcccccc 812

                                                                       
Query: 315 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctctt 374
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 811 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttactctt 752

                                                                       
Query: 375 cccaacgttatcatcgaccccatgcaaagtatcatgagcatgcagtagtgactgccgttg 434
            ||||| |||||||| |||||||||||||||  |||||| ||||| ||||||||||||||
Sbjct: 751 gccaacattatcatcaaccccatgcaaagtagtatgagcgtgcagcagtgactgccgttg 692

                                                                       
Query: 435 ttgatgaaggtcctgaagaattgacacaccaagttcttctgtctccagcatagttcttcg 494
           ||||||||| |||||||||||||||||||||||||||||||||||||  || ||||||||
Sbjct: 691 ttgatgaagatcctgaagaattgacacaccaagttcttctgtctccaatatggttcttcg 632

                                                                       
Query: 495 gctctctttaattctgtcagtggactgattcagtcgttctgttgtcatcatcaaccttcc 554
           ||||||||||||  | ||| ||||||||||||||| |||||||||||||||||| |||||
Sbjct: 631 gctctctttaatcttatcattggactgattcagtctttctgttgtcatcatcaatcttcc 572

                                          
Query: 555 tcgctgatcagtggaaaccgcgagtgtgtca 585
            | ||||||||| ||  ||||||| ||||||
Sbjct: 571 cctctgatcagtagacgccgcgagagtgtca 541
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>dbj|AK072746.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135J09, full
            insert sequence
          Length = 2300

 Score =  381 bits (192), Expect = e-102
 Identities = 282/312 (90%)
 Strand = Plus / Minus

                                                                        
Query: 255  agcgagcttaaagtagagtatgatgaggatggccacaacaagagttgaaatgattccacc 314
            ||||||||||||||| |||||||  |||||||| | |||||||| || ||| || || ||
Sbjct: 2060 agcgagcttaaagtacagtatgagaaggatggctagaacaagagctgcaattatcccccc 2001

                                                                        
Query: 315  aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctctt 374
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2000 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttactctt 1941

                                                                        
Query: 375  cccaacgttatcatcgaccccatgcaaagtatcatgagcatgcagtagtgactgccgttg 434
             ||||| |||||||| |||||||||||||||  |||||| ||||| ||||||||||||||
Sbjct: 1940 gccaacattatcatcaaccccatgcaaagtagtatgagcgtgcagcagtgactgccgttg 1881

                                                                        
Query: 435  ttgatgaaggtcctgaagaattgacacaccaagttcttctgtctccagcatagttcttcg 494
            ||||||||| |||||||||||||||||||||||||||||||||||||  || ||||||||
Sbjct: 1880 ttgatgaagatcctgaagaattgacacaccaagttcttctgtctccaatatggttcttcg 1821

                                                                        
Query: 495  gctctctttaattctgtcagtggactgattcagtcgttctgttgtcatcatcaaccttcc 554
            ||||||||||||  | ||| ||||||||||||||| |||||||||||||||||| |||||
Sbjct: 1820 gctctctttaatcttatcattggactgattcagtctttctgttgtcatcatcaatcttcc 1761

                        
Query: 555  tcgctgatcagt 566
             | |||||||||
Sbjct: 1760 cctctgatcagt 1749
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>gb|AY104165.1| Zea mays PCO134015 mRNA sequence
          Length = 1189

 Score =  361 bits (182), Expect = 2e-96
 Identities = 290/326 (88%)
 Strand = Plus / Minus

                                                                       
Query: 253 tgagcgagcttaaagtagagtatgatgaggatggccacaacaagagttgaaatgattcca 312
           ||||||||||| |||||||||||||  |||||||||| | | ||||  |  |||||||| 
Sbjct: 932 tgagcgagcttgaagtagagtatgaaaaggatggccagagcgagagccgtgatgattccc 873

                                                                       
Query: 313 ccaatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctc 372
           |||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 872 ccaatgatccacttgttcctatccatcctctttgacattgcagccaggatcttcttgctc 813

                                                                       
Query: 373 ttcccaacgttatcatcgaccccatgcaaagtatcatgagcatgcagtagtgactgccgt 432
           || |||| ||||||||| || || |||||||||  ||||||||| |||||||||||||  
Sbjct: 812 ttgccaatgttatcatcaactccgtgcaaagtagtatgagcatgtagtagtgactgcctc 753

                                                                       
Query: 433 tgttgatgaaggtcctgaagaattgacacaccaagttcttctgtctccagcatagttctt 492
           ||||| ||||||||||||||||| || |||||||||||||||||||||| ||||||||||
Sbjct: 752 tgttggtgaaggtcctgaagaatcgagacaccaagttcttctgtctccaacatagttctt 693

                                                                       
Query: 493 cggctctctttaattctgtcagtggactgattcagtcgttctgttgtcatcatcaacctt 552
           ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| || 
Sbjct: 692 cggctctctttaattctgtcagtggactgattcagtctttcagttgtcatcatcaatctc 633

                                     
Query: 553 cctcgctgatcagtggaaaccgcgag 578
           || | ||||||||| || ||||||||
Sbjct: 632 cccctctgatcagtagacaccgcgag 607



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                        
Query: 189  cagacaac-cttatcacacaattactga 215
            |||||||| |||||||||||||||||||
Sbjct: 1001 cagacaactcttatcacacaattactga 974
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  204 bits (103), Expect = 2e-49
 Identities = 145/159 (91%)
 Strand = Plus / Minus

                                                                            
Query: 408      atgagcatgcagtagtgactgccgttgttgatgaaggtcctgaagaattgacacaccaag 467
                |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 29360102 atgagcgtgcagcagtgactgccgttgttgatgaagatcctgaagaattgacacaccaag 29360043

                                                                            
Query: 468      ttcttctgtctccagcatagttcttcggctctctttaattctgtcagtggactgattcag 527
                ||||||||||||||  || ||||||||||||||||||||  | ||| |||||||||||||
Sbjct: 29360042 ttcttctgtctccaatatggttcttcggctctctttaatcttatcattggactgattcag 29359983

                                                       
Query: 528      tcgttctgttgtcatcatcaaccttcctcgctgatcagt 566
                || |||||||||||||||||| ||||| | |||||||||
Sbjct: 29359982 tctttctgttgtcatcatcaatcttcccctctgatcagt 29359944



 Score =  180 bits (91), Expect = 3e-42
 Identities = 133/147 (90%)
 Strand = Plus / Minus

                                                                            
Query: 255      agcgagcttaaagtagagtatgatgaggatggccacaacaagagttgaaatgattccacc 314
                ||||||||||||||| |||||||  |||||||| | |||||||| || ||| || || ||
Sbjct: 29360914 agcgagcttaaagtacagtatgagaaggatggctagaacaagagctgcaattatcccccc 29360855

                                                                            
Query: 315      aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctctt 374
                |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 29360854 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttactctt 29360795

                                           
Query: 375      cccaacgttatcatcgaccccatgcaa 401
                 ||||| |||||||| |||||||||||
Sbjct: 29360794 gccaacattatcatcaaccccatgcaa 29360768



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                           
Query: 316      atgatccacttgttcctgtccatcctc 342
                |||||||||||||||||||||||||||
Sbjct: 21308053 atgatccacttgttcctgtccatcctc 21308027



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                           
Query: 316      atgatccacttgttcctgtccatcctc 342
                |||||||||||||||||||||||||||
Sbjct: 21279567 atgatccacttgttcctgtccatcctc 21279541



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                           
Query: 316      atgatccacttgttcctgtccatcctc 342
                |||||||||||||||||||||||||||
Sbjct: 21274627 atgatccacttgttcctgtccatcctc 21274601



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 463      ccaagttcttctgtctccagcatagttct 491
                ||||| ||||| |||||||||||||||||
Sbjct: 21273677 ccaagatcttcagtctccagcatagttct 21273649
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>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0692C11
          Length = 169562

 Score =  204 bits (103), Expect = 2e-49
 Identities = 145/159 (91%)
 Strand = Plus / Minus

                                                                          
Query: 408    atgagcatgcagtagtgactgccgttgttgatgaaggtcctgaagaattgacacaccaag 467
              |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 138965 atgagcgtgcagcagtgactgccgttgttgatgaagatcctgaagaattgacacaccaag 138906

                                                                          
Query: 468    ttcttctgtctccagcatagttcttcggctctctttaattctgtcagtggactgattcag 527
              ||||||||||||||  || ||||||||||||||||||||  | ||| |||||||||||||
Sbjct: 138905 ttcttctgtctccaatatggttcttcggctctctttaatcttatcattggactgattcag 138846

                                                     
Query: 528    tcgttctgttgtcatcatcaaccttcctcgctgatcagt 566
              || |||||||||||||||||| ||||| | |||||||||
Sbjct: 138845 tctttctgttgtcatcatcaatcttcccctctgatcagt 138807



 Score =  180 bits (91), Expect = 3e-42
 Identities = 133/147 (90%)
 Strand = Plus / Minus

                                                                          
Query: 255    agcgagcttaaagtagagtatgatgaggatggccacaacaagagttgaaatgattccacc 314
              ||||||||||||||| |||||||  |||||||| | |||||||| || ||| || || ||
Sbjct: 139777 agcgagcttaaagtacagtatgagaaggatggctagaacaagagctgcaattatcccccc 139718

                                                                          
Query: 315    aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctctt 374
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 139717 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttactctt 139658

                                         
Query: 375    cccaacgttatcatcgaccccatgcaa 401
               ||||| |||||||| |||||||||||
Sbjct: 139657 gccaacattatcatcaaccccatgcaa 139631
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>dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0510F09
          Length = 138277

 Score =  204 bits (103), Expect = 2e-49
 Identities = 145/159 (91%)
 Strand = Plus / Minus

                                                                         
Query: 408   atgagcatgcagtagtgactgccgttgttgatgaaggtcctgaagaattgacacaccaag 467
             |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 55164 atgagcgtgcagcagtgactgccgttgttgatgaagatcctgaagaattgacacaccaag 55105

                                                                         
Query: 468   ttcttctgtctccagcatagttcttcggctctctttaattctgtcagtggactgattcag 527
             ||||||||||||||  || ||||||||||||||||||||  | ||| |||||||||||||
Sbjct: 55104 ttcttctgtctccaatatggttcttcggctctctttaatcttatcattggactgattcag 55045

                                                    
Query: 528   tcgttctgttgtcatcatcaaccttcctcgctgatcagt 566
             || |||||||||||||||||| ||||| | |||||||||
Sbjct: 55044 tctttctgttgtcatcatcaatcttcccctctgatcagt 55006



 Score =  180 bits (91), Expect = 3e-42
 Identities = 133/147 (90%)
 Strand = Plus / Minus

                                                                         
Query: 255   agcgagcttaaagtagagtatgatgaggatggccacaacaagagttgaaatgattccacc 314
             ||||||||||||||| |||||||  |||||||| | |||||||| || ||| || || ||
Sbjct: 55976 agcgagcttaaagtacagtatgagaaggatggctagaacaagagctgcaattatcccccc 55917

                                                                         
Query: 315   aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctctt 374
             |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 55916 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttactctt 55857

                                        
Query: 375   cccaacgttatcatcgaccccatgcaa 401
              ||||| |||||||| |||||||||||
Sbjct: 55856 gccaacattatcatcaaccccatgcaa 55830
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>gb|AC182667.2| Populus trichocarpa clone Pop1-18L12, complete sequence
          Length = 32928

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                     
Query: 450  aagaattgacacaccaagttcttctgtctccagcatagttcttcggctctctttaat 506
            ||||||||| |||||||| ||||||||||| ||||| ||||||| |||||| |||||
Sbjct: 3202 aagaattgagacaccaagctcttctgtctctagcatggttcttctgctctccttaat 3146
to top
>gb|AY105301.1| Zea mays PCO100019 mRNA sequence
          Length = 1051

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                       
Query: 405 atcatgagcatgcagtagtgactgccgttgttgatgaaggtcctgaagaattgacacacc 464
           ||||||||||||||  || ||||| || ||||||   ||||| || || || || |||||
Sbjct: 679 atcatgagcatgcaagagagactggcgctgttgactcaggtcatgcaggatagagacacc 620

                                      
Query: 465 aagttcttctgtctccagcatagttct 491
           ||||||||| |||||||||||||||||
Sbjct: 619 aagttcttcagtctccagcatagttct 593
to top
>ref|NM_113833.2| Arabidopsis thaliana VTI13; SNARE binding / receptor AT3G29100
            (VTI13) mRNA, complete cds
          Length = 1299

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 445  tcctgaagaattgacacaccaagttcttctgtctccagcatagttct 491
            |||||||| ||||| |||||||| |||||||||||||| || |||||
Sbjct: 1023 tcctgaaggattgaaacaccaagctcttctgtctccagtatcgttct 977



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 367  ttgctcttcccaacgttatcatcgaccccatg 398
            |||||||| || |||||||||||||| |||||
Sbjct: 1101 ttgctctttccgacgttatcatcgactccatg 1070
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>ref|NM_193510.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 237

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 316 atgatccacttgttcctgtccatcctc 342
           |||||||||||||||||||||||||||
Sbjct: 170 atgatccacttgttcctgtccatcctc 144
to top
>ref|NM_193508.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 666

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 316 atgatccacttgttcctgtccatcctc 342
           |||||||||||||||||||||||||||
Sbjct: 599 atgatccacttgttcctgtccatcctc 573



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 463 ccaagttcttctgtctccagcatagttct 491
           ||||| ||||| |||||||||||||||||
Sbjct: 452 ccaagatcttcagtctccagcatagttct 424
to top
>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0496H05
          Length = 147817

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 316   atgatccacttgttcctgtccatcctc 342
             |||||||||||||||||||||||||||
Sbjct: 29991 atgatccacttgttcctgtccatcctc 29965



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 316  atgatccacttgttcctgtccatcctc 342
            |||||||||||||||||||||||||||
Sbjct: 1505 atgatccacttgttcctgtccatcctc 1479
to top
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1064G04
          Length = 186704

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                         
Query: 316    atgatccacttgttcctgtccatcctc 342
              |||||||||||||||||||||||||||
Sbjct: 177076 atgatccacttgttcctgtccatcctc 177050



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                         
Query: 316    atgatccacttgttcctgtccatcctc 342
              |||||||||||||||||||||||||||
Sbjct: 172136 atgatccacttgttcctgtccatcctc 172110



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 463    ccaagttcttctgtctccagcatagttct 491
              ||||| ||||| |||||||||||||||||
Sbjct: 171186 ccaagatcttcagtctccagcatagttct 171158
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>dbj|AK118255.1| Arabidopsis thaliana At3g29100 mRNA for putative vesicle transport
           protein, complete cds, clone: RAFL19-55-L11
          Length = 1077

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 445 tcctgaagaattgacacaccaagttcttctgtctccagcatagttct 491
           |||||||| ||||| |||||||| |||||||||||||| || |||||
Sbjct: 831 tcctgaaggattgaaacaccaagctcttctgtctccagtatcgttct 785



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 367 ttgctcttcccaacgttatcatcgaccccatg 398
           |||||||| || |||||||||||||| |||||
Sbjct: 909 ttgctctttccgacgttatcatcgactccatg 878
to top
>dbj|AB018121.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXE2
          Length = 86854

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 445   tcctgaagaattgacacaccaagttcttctgtctccagcatagttct 491
             |||||||| ||||| |||||||| |||||||||||||| || |||||
Sbjct: 23758 tcctgaaggattgaaacaccaagctcttctgtctccagtatcgttct 23804



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 367   ttgctcttcccaacgttatcatcgaccccatg 398
             |||||||| || |||||||||||||| |||||
Sbjct: 23680 ttgctctttccgacgttatcatcgactccatg 23711
to top
>dbj|AK102003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033079N06, full
           insert sequence
          Length = 947

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 316 atgatccacttgttcctgtccatcctc 342
           |||||||||||||||||||||||||||
Sbjct: 707 atgatccacttgttcctgtccatcctc 681



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 463 ccaagttcttctgtctccagcatagttct 491
           ||||| ||||| |||||||||||||||||
Sbjct: 560 ccaagatcttcagtctccagcatagttct 532
to top
>gb|DQ235191.1| Solanum tuberosum clone 167C07 vesicle transport v-SNARE 11-like
           mRNA, complete cds
          Length = 1025

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 116/146 (79%)
 Strand = Plus / Minus

                                                                       
Query: 313 ccaatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctc 372
           ||||||||||| || ||||||  ||||||  |||||||||  | ||| ||||| ||||||
Sbjct: 701 ccaatgatccatttattcctgctcatccttcttgacattgtagtcagaatcttcttgctc 642

                                                                       
Query: 373 ttcccaacgttatcatcgaccccatgcaaagtatcatgagcatgcagtagtgactgccgt 432
            | | ||  |||||||| || ||||| |  || ||||| |||||||| || ||||| |||
Sbjct: 641 ctgctaatattatcatccactccatggagcgtgtcatgtgcatgcagaagagactgacgt 582

                                     
Query: 433 tgttgatgaaggtcctgaagaattga 458
           |||||||| |  || |||||||||||
Sbjct: 581 tgttgatgcaaatcttgaagaattga 556
to top
>gb|DQ191651.1| Solanum tuberosum unknown mRNA
          Length = 966

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 116/146 (79%)
 Strand = Plus / Minus

                                                                       
Query: 313 ccaatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctc 372
           ||||||||||| || ||||||  ||||||  |||||||||  | ||| ||||| ||||||
Sbjct: 700 ccaatgatccatttattcctgctcatccttcttgacattgtagtcagaatcttcttgctc 641

                                                                       
Query: 373 ttcccaacgttatcatcgaccccatgcaaagtatcatgagcatgcagtagtgactgccgt 432
            | | ||  |||||||| || ||||| |  || ||||| |||||||| || ||||| |||
Sbjct: 640 ctgctaatattatcatccactccatggagcgtgtcatgtgcatgcagaagagactgacgt 581

                                     
Query: 433 tgttgatgaaggtcctgaagaattga 458
           |||||||| |  || |||||||||||
Sbjct: 580 tgttgatgcaaatcttgaagaattga 555
to top
>dbj|AB102768.1| Oryzias latipes plscr1, zic4, zic1 genes for phospholipid scramblase 1,
             zinc finger of the cerebellum 4, zinc finger of the
             cerebellum 1, partial and complete cds
          Length = 228508

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 446   cctgaagaattgacacaccaagt 468
             |||||||||||||||||||||||
Sbjct: 65995 cctgaagaattgacacaccaagt 66017
to top
>gb|BT013170.1| Lycopersicon esculentum clone 134237F, mRNA sequence
          Length = 1000

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 115/146 (78%)
 Strand = Plus / Minus

                                                                       
Query: 313 ccaatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctc 372
           ||||||||||| || ||||||  ||||||  |||||||||  | ||  ||||| ||||||
Sbjct: 739 ccaatgatccatttattcctgctcatccttcttgacattgtagtcaaaatcttcttgctc 680

                                                                       
Query: 373 ttcccaacgttatcatcgaccccatgcaaagtatcatgagcatgcagtagtgactgccgt 432
            | | ||  |||||||| || ||||| |  || ||||| |||||||| || ||||| |||
Sbjct: 679 ctgctaatattatcatccactccatgaagcgtgtcatgtgcatgcagaagagactgacgt 620

                                     
Query: 433 tgttgatgaaggtcctgaagaattga 458
           |||||||| |  || |||||||||||
Sbjct: 619 tgttgatgcaaatcttgaagaattga 594
to top
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 519     ctgattcagtcgttctgttgtcatc 543
               |||||||||||||| ||||||||||
Sbjct: 1634547 ctgattcagtcgttgtgttgtcatc 1634523
to top
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06,
            complete sequence
          Length = 134001

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 534  tgttgtcatcatcaaccttcctcgc 558
            |||||||||||||||||||| ||||
Sbjct: 4006 tgttgtcatcatcaaccttcatcgc 3982
to top
>gb|AC087041.2| Rattus norvegicus strain Brown Norway clone RP31-188L2, complete
             sequence
          Length = 123260

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 152   aagggacaatctgtgttgtccaatg 176
             ||||||||||| |||||||||||||
Sbjct: 43864 aagggacaatcagtgttgtccaatg 43840
to top
>gb|AC145992.2| Pan troglodytes BAC clone RP43-172K3 from 7, complete sequence
          Length = 208817

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 264    aaagtagagtatgatgaggat 284
              |||||||||||||||||||||
Sbjct: 132065 aaagtagagtatgatgaggat 132085
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>gb|AC006451.5| Homo sapiens PAC clone RP4-562A11 from 7, complete sequence
          Length = 145966

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 264   aaagtagagtatgatgaggat 284
             |||||||||||||||||||||
Sbjct: 97145 aaagtagagtatgatgaggat 97125
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>gb|AC119412.16| Medicago truncatula clone mth2-31d18, complete sequence
          Length = 120757

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 313   ccaatgatccacttgttcctgtccatcct 341
             |||||||||||||||||| ||| ||||||
Sbjct: 46784 ccaatgatccacttgttcttgttcatcct 46756
to top
>gb|AC096070.7| Rattus norvegicus 4 BAC CH230-20J7 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 231332

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 152   aagggacaatctgtgttgtccaatg 176
             ||||||||||| |||||||||||||
Sbjct: 27756 aagggacaatcagtgttgtccaatg 27780
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 534     tgttgtcatcatcaaccttcctcgc 558
               |||||||||||||||||||| ||||
Sbjct: 7726420 tgttgtcatcatcaaccttcatcgc 7726396
to top
>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 152    aagggacaatctgtgttgtccaatg 176
              ||||||||||| |||||||||||||
Sbjct: 620650 aagggacaatcagtgttgtccaatg 620626
to top
>gb|AC159380.8| Mus musculus 10 BAC RP24-460M18 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 196877

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 58     ggcacaactgacttcctgaca 78
              |||||||||||||||||||||
Sbjct: 145663 ggcacaactgacttcctgaca 145683
to top
>gb|AC132487.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0499F10,
             complete sequence
          Length = 75032

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 534   tgttgtcatcatcaaccttcctcgc 558
             |||||||||||||||||||| ||||
Sbjct: 36928 tgttgtcatcatcaaccttcatcgc 36904
to top
>gb|AC167976.4| Mus musculus BAC clone RP23-167L5 from chromosome 3, complete sequence
          Length = 211791

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    gacctacctggctggctcag 252
              ||||||||||||||||||||
Sbjct: 131741 gacctacctggctggctcag 131760
to top
>ref|XM_476215.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 126

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 534 tgttgtcatcatcaaccttc 553
           ||||||||||||||||||||
Sbjct: 22  tgttgtcatcatcaaccttc 3
to top
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     atgccaatgaacaactcaaa 118
              ||||||||||||||||||||
Sbjct: 809012 atgccaatgaacaactcaaa 808993
to top
>gb|AC084381.6| Homo sapiens BAC clone RP11-20K20 from 7, complete sequence
          Length = 129727

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 496    ctctctttaattctgtcagt 515
              ||||||||||||||||||||
Sbjct: 121977 ctctctttaattctgtcagt 121958
to top
>emb|CR726422.2|CNS0GNGC Tetraodon nigroviridis full-length cDNA
          Length = 1022

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttcctgtccatcctctttga 347
           ||||||||||||||||||||
Sbjct: 236 ttcctgtccatcctctttga 217
to top
>emb|CR725519.2|CNS0GMR9 Tetraodon nigroviridis full-length cDNA
          Length = 1572

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttcctgtccatcctctttga 347
           ||||||||||||||||||||
Sbjct: 215 ttcctgtccatcctctttga 196
to top
>emb|CR714652.2|CNS0GEDK Tetraodon nigroviridis full-length cDNA
          Length = 950

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttcctgtccatcctctttga 347
           ||||||||||||||||||||
Sbjct: 163 ttcctgtccatcctctttga 144
to top
>emb|CR714556.2|CNS0GEAW Tetraodon nigroviridis full-length cDNA
          Length = 653

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttcctgtccatcctctttga 347
           ||||||||||||||||||||
Sbjct: 225 ttcctgtccatcctctttga 206
to top
>emb|CR709930.2|CNS0GAQE Tetraodon nigroviridis full-length cDNA
          Length = 646

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttcctgtccatcctctttga 347
           ||||||||||||||||||||
Sbjct: 218 ttcctgtccatcctctttga 199
to top
>emb|CR709463.2|CNS0GADF Tetraodon nigroviridis full-length cDNA
          Length = 951

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttcctgtccatcctctttga 347
           ||||||||||||||||||||
Sbjct: 164 ttcctgtccatcctctttga 145
to top
>emb|CR708441.2|CNS0G9L1 Tetraodon nigroviridis full-length cDNA
          Length = 951

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttcctgtccatcctctttga 347
           ||||||||||||||||||||
Sbjct: 164 ttcctgtccatcctctttga 145
to top
>emb|CR704236.2|CNS0G6C8 Tetraodon nigroviridis full-length cDNA
          Length = 1007

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttcctgtccatcctctttga 347
           ||||||||||||||||||||
Sbjct: 217 ttcctgtccatcctctttga 198
to top
>emb|CR700286.2|CNS0G3AI Tetraodon nigroviridis full-length cDNA
          Length = 1338

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttcctgtccatcctctttga 347
           ||||||||||||||||||||
Sbjct: 215 ttcctgtccatcctctttga 196
to top
>emb|CR697688.2|CNS0G1AC Tetraodon nigroviridis full-length cDNA
          Length = 1559

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttcctgtccatcctctttga 347
           ||||||||||||||||||||
Sbjct: 220 ttcctgtccatcctctttga 201
to top
>emb|CR690633.2|CNS0FVUD Tetraodon nigroviridis full-length cDNA
          Length = 989

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttcctgtccatcctctttga 347
           ||||||||||||||||||||
Sbjct: 215 ttcctgtccatcctctttga 196
to top
>emb|CR689349.2|CNS0FUUP Tetraodon nigroviridis full-length cDNA
          Length = 439

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttcctgtccatcctctttga 347
           ||||||||||||||||||||
Sbjct: 225 ttcctgtccatcctctttga 206
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>emb|CR672581.2|CNS0FHXN Tetraodon nigroviridis full-length cDNA
          Length = 1490

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttcctgtccatcctctttga 347
           ||||||||||||||||||||
Sbjct: 138 ttcctgtccatcctctttga 119
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>emb|CR670137.2|CNS0FG1R Tetraodon nigroviridis full-length cDNA
          Length = 1585

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttcctgtccatcctctttga 347
           ||||||||||||||||||||
Sbjct: 230 ttcctgtccatcctctttga 211
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>gb|AC005588.1| Homo sapiens PAC clone RP5-1161G23 from 7, complete sequence
          Length = 119483

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    caaatatttaaagatgtttg 134
              ||||||||||||||||||||
Sbjct: 109892 caaatatttaaagatgtttg 109911
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>emb|CR667360.1|CNS0FDWM Tetraodon nigroviridis full-length cDNA
          Length = 1577

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttcctgtccatcctctttga 347
           ||||||||||||||||||||
Sbjct: 225 ttcctgtccatcctctttga 206
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>emb|CR647318.2|CNS0EYFW Tetraodon nigroviridis full-length cDNA
          Length = 1541

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttcctgtccatcctctttga 347
           ||||||||||||||||||||
Sbjct: 202 ttcctgtccatcctctttga 183
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>emb|CR641428.2|CNS0ETWA Tetraodon nigroviridis full-length cDNA
          Length = 1011

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttcctgtccatcctctttga 347
           ||||||||||||||||||||
Sbjct: 225 ttcctgtccatcctctttga 206
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>emb|CR634500.3|CNS0EOJU Tetraodon nigroviridis full-length cDNA
          Length = 1007

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 ttcctgtccatcctctttga 347
           ||||||||||||||||||||
Sbjct: 218 ttcctgtccatcctctttga 199
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>emb|AL451050.8| Human DNA sequence from clone RP11-277B15 on chromosome 1 Contains a
             ribosomal protein S17 (RPS17) pseudogene, a novel gene,
             the 5' end of the POU2F1 gene for POU domain class 2
             transcription factor 1 and a CpG island, complete sequence
          Length = 122416

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 496   ctctctttaattctgtcagt 515
             ||||||||||||||||||||
Sbjct: 15465 ctctctttaattctgtcagt 15484
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>gb|AC155261.3| Mus musculus BAC clone RP24-66D10 from chromosome 18, complete sequence
          Length = 207400

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 407    catgagcatgcagtagtgactgcc 430
              |||| |||||||||||||||||||
Sbjct: 108870 catgggcatgcagtagtgactgcc 108893
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>gb|AC006269.13| Homo sapiens chromosome , clone RP11-515E23, complete sequence
          Length = 167229

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     gacaagagtgttgctataca 94
              ||||||||||||||||||||
Sbjct: 122309 gacaagagtgttgctataca 122290
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>emb|BX927159.10| Zebrafish DNA sequence from clone DKEY-17C23 in linkage group 17,
              complete sequence
          Length = 169728

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 94     atgacatgccaatgaacaactcaaatat 121
              ||||||||||| | ||||||||||||||
Sbjct: 165629 atgacatgccattcaacaactcaaatat 165602
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>ref|NM_001039852.1| Monodelphis domestica bitter taste receptor Modo-T2R62 (T2R62),
           mRNA
          Length = 903

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 315 aatgatccacttgttcctgt 334
           ||||||||||||||||||||
Sbjct: 369 aatgatccacttgttcctgt 388
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>gb|AC027285.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-40I5, complete
              sequence
          Length = 241886

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 492    tcggctctctttaattctgt 511
              ||||||||||||||||||||
Sbjct: 107458 tcggctctctttaattctgt 107477
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>gb|AC153836.5| Mus musculus 6 BAC RP23-479D21 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 231946

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   tcggctctctttaattctgt 511
             ||||||||||||||||||||
Sbjct: 47700 tcggctctctttaattctgt 47719
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>gb|AC012374.13| Homo sapiens chromosome 15 clone ctd-2287a20 map 15q21, complete
             sequence
          Length = 142105

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 496   ctctctttaattctgtcagt 515
             ||||||||||||||||||||
Sbjct: 66843 ctctctttaattctgtcagt 66824
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>gb|AC010999.6|AC010999 Homo sapiens chromosome 15 clone RP11-323F24 map 15q21.3, complete
             sequence
          Length = 221986

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 496   ctctctttaattctgtcagt 515
             ||||||||||||||||||||
Sbjct: 27403 ctctctttaattctgtcagt 27384
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>dbj|AK054388.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN
            full-length enriched library, clone:E330021L10
            product:unclassifiable, full insert sequence
          Length = 2936

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 492  tcggctctctttaattctgt 511
            ||||||||||||||||||||
Sbjct: 2266 tcggctctctttaattctgt 2285
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>gb|AC090517.2|AC090517 Homo sapiens chromosome 15 clone RP11-31H5 map 15q21.3, complete sequence
          Length = 185446

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 496    ctctctttaattctgtcagt 515
              ||||||||||||||||||||
Sbjct: 162481 ctctctttaattctgtcagt 162462
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>emb|BX822946.1|CNS0A70C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB74ZH01 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1300

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 367  ttgctcttcccaacgttatcatcgaccccatg 398
            |||||||| || |||||||||||||| |||||
Sbjct: 1101 ttgctctttccgacgttatcatcgactccatg 1070
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>gb|AC132189.13| Mus musculus chromosome 12, clone RP24-95M20, complete sequence
          Length = 203534

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 330   cctgtccatcctctttgacattgc 353
             ||||||||||||||||| ||||||
Sbjct: 45002 cctgtccatcctctttgccattgc 44979
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>gb|AC096565.1| Homo sapiens BAC clone RP11-287O8 from 2, complete sequence
          Length = 172515

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     acagttttacatacataaaa 51
              ||||||||||||||||||||
Sbjct: 106509 acagttttacatacataaaa 106528
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>gb|AC149889.2| Xenopus tropicalis clone ISB-14A23, complete sequence
          Length = 100708

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   aacagttttacatacataaa 50
            ||||||||||||||||||||
Sbjct: 9290 aacagttttacatacataaa 9271
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>emb|BX928740.16| Zebrafish DNA sequence from clone CH211-245J22 in linkage group 18,
             complete sequence
          Length = 154133

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    ttttacatacataaaatggt 55
             ||||||||||||||||||||
Sbjct: 62040 ttttacatacataaaatggt 62021
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>emb|BX908395.15| Zebrafish DNA sequence from clone DKEY-242H9 in linkage group 18,
              complete sequence
          Length = 130348

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 437    gatgaaggtcctgaagaatt 456
              ||||||||||||||||||||
Sbjct: 121754 gatgaaggtcctgaagaatt 121735
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>gb|AC149886.2| Xenopus tropicalis clone ISB-145C16, complete sequence
          Length = 113384

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    aacagttttacatacataaa 50
             ||||||||||||||||||||
Sbjct: 63113 aacagttttacatacataaa 63132
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>gb|AC102236.9| Mus musculus chromosome 7, clone RP24-100O13, complete sequence
          Length = 212000

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     aacagttttacatacataaa 50
              ||||||||||||||||||||
Sbjct: 120633 aacagttttacatacataaa 120652
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>gb|AC126685.5| Mus musculus BAC clone RP23-103I23 from chromosome 12, complete
             sequence
          Length = 193708

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 330   cctgtccatcctctttgacattgc 353
             ||||||||||||||||| ||||||
Sbjct: 34700 cctgtccatcctctttgccattgc 34723
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>gb|AC148002.3| Mus musculus BAC clone RP23-478M1 from 18, complete sequence
          Length = 200845

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 407    catgagcatgcagtagtgactgcc 430
              |||| |||||||||||||||||||
Sbjct: 181025 catgggcatgcagtagtgactgcc 181048
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>dbj|AB249765.1| Monodelphis domestica DNA for bitter taste receptor, complete cds,
           clone: Modo-T2R62
          Length = 903

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 315 aatgatccacttgttcctgt 334
           ||||||||||||||||||||
Sbjct: 369 aatgatccacttgttcctgt 388
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>dbj|AP005136.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-715F3, complete
             sequence
          Length = 174547

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   acaactcaaatatttaaaga 128
             ||||||||||||||||||||
Sbjct: 37054 acaactcaaatatttaaaga 37073
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>emb|AL611934.18| Mouse DNA sequence from clone RP23-472A8 on chromosome 4, complete
             sequence
          Length = 184866

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 497   tctctttaattctgtcagtg 516
             ||||||||||||||||||||
Sbjct: 25817 tctctttaattctgtcagtg 25836
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>emb|AL732317.13| Mouse DNA sequence from clone RP23-139F8 on chromosome 2, complete
              sequence
          Length = 222471

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    aatgaacaactcaaatattt 123
              ||||||||||||||||||||
Sbjct: 217158 aatgaacaactcaaatattt 217177
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>dbj|AP005230.2| Homo sapiens genomic DNA, chromosome 18p, clone:RP11-620B7, complete
              sequence
          Length = 176526

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    acaactcaaatatttaaaga 128
              ||||||||||||||||||||
Sbjct: 166249 acaactcaaatatttaaaga 166268


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,154,677
Number of Sequences: 3902068
Number of extensions: 5154677
Number of successful extensions: 98942
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98668
Number of HSP's gapped (non-prelim): 272
length of query: 585
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 562
effective length of database: 17,143,297,704
effective search space: 9634533309648
effective search space used: 9634533309648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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