| Clone Name | rbags6d16 |
|---|---|
| Clone Library Name | barley_pub |
>STAB1_MOUSE (Q8R4Y4) Stabilin-1 precursor (FEEL-1 protein)| Length = 2571 Score = 34.3 bits (77), Expect = 0.27 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = +2 Query: 362 FGGTVYCGLCPFRRSGPT-TVILTCPSSCTSNTVRGSPM**CHVSAQGMRCSRAIS 526 F GT C +C R GPT + + C +RG+ CH QG+RC + I+ Sbjct: 1363 FHGTA-CEMCELGRYGPTCSGVCDCDHGLCQEGLRGNGSCVCHAGWQGLRCDQKIT 1417
>ACFD_ECOLI (Q46837) Putative lipoprotein acfD homolog precursor| Length = 1520 Score = 32.0 bits (71), Expect = 1.3 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -1 Query: 297 VKTPGRDPDLHYSFVGVTCAPAYQFEDDEMATRDG 193 V TPG PDL+ SFV YQ++ E+ +G Sbjct: 243 VTTPGTKPDLNASFVSANAEQFYQYQPTEIILSEG 277
>STAB1_HUMAN (Q9NY15) Stabilin-1 precursor (FEEL-1 protein) (MS-1 antigen)| Length = 2570 Score = 31.2 bits (69), Expect = 2.3 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Frame = +2 Query: 362 FGGTVYCGLCPFRRSGPT-TVILTCPSSCTSNTVRGSPM**CHVSAQGMRCSRAI-SPAG 535 F GT C +C R GP T + C ++G C+V QG+RC + I SP Sbjct: 1362 FHGTA-CEVCELGRYGPNCTGVCDCAHGLCQEGLQGDGSCVCNVGWQGLRCDQKITSPQC 1420 Query: 536 RRK 544 RK Sbjct: 1421 PRK 1423
>YS31_CAEEL (Q09368) Hypothetical protein ZK1321.1| Length = 158 Score = 29.6 bits (65), Expect = 6.6 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +1 Query: 199 TCGHFIILELVC-RSTGHSNERIMQVRVPSGCLDKNTAIISEGLDIVGQEGAKPH 360 +CG + + C R G+SN+++ R+P CL + I G+ + +KPH Sbjct: 66 SCGDPLATKSACGRKHGNSNQKLACFRLPDPCLREYAVIFEHGVPL---PPSKPH 117
>OXDC_BACSU (O34714) Oxalate decarboxylase oxdC (EC 4.1.1.2)| Length = 385 Score = 29.6 bits (65), Expect = 6.6 Identities = 27/111 (24%), Positives = 47/111 (42%) Frame = -1 Query: 579 YKVERAVSSAIYFLLPAGEIARLHRIPCAETWHYYMGEPLTVFEVHDDGQVKMTVVGPDL 400 +KV + ++SA+ + P G + LH P W YY+ G+ +MTV D Sbjct: 251 FKVSKTIASALVTVEP-GAMRELHWHPNTHEWQYYI-----------SGKARMTVFASD- 297 Query: 399 RKGQRPQYTVPPNVWFGAFLTHDIESFTDDGSVFVKTPGRDPDLHYSFVGV 247 + Y + + H +E+ D+ VF++ D HY+ V + Sbjct: 298 GHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEI---FKDDHYADVSL 345
>SH2P1_MOUSE (Q62018) SH2 domain-binding protein 1 (Tetratricopeptide| repeat-containing, SH2-binding phosphoprotein of 150 kDa) (TPR-containing, SH2-binding phosphoprotein of 150 kDa) (p150TSP) Length = 1173 Score = 29.6 bits (65), Expect = 6.6 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +3 Query: 468 LPCSSAMSQRKGCGAAEQSPQQAGGSRLHYSQHAPP 575 LP S +RKG G+ ++ ++ GG R + PP Sbjct: 929 LPVSKKKKRRKGSGSEQEGEEEEGGERKKKRRRRPP 964
>MOK13_SCHPO (Q9Y719) Cell wall alpha-1,3-glucan synthase mok13 (EC 2.4.1.183)| Length = 2358 Score = 29.3 bits (64), Expect = 8.6 Identities = 10/25 (40%), Positives = 18/25 (72%) Frame = +2 Query: 290 VLTKTLPSSVKDSISWVRKAPNHTF 364 VL + PS +K+S++W+++AP F Sbjct: 1009 VLVRLPPSELKESVTWIKEAPPSNF 1033 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,910,161 Number of Sequences: 219361 Number of extensions: 1940231 Number of successful extensions: 5163 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4991 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5161 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)