ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags6d14 |
|---|---|
| Clone Library Name | barley_pub |
>RS6_ASPOF (Q9M3V8) 40S ribosomal protein S6| Length = 251 Score = 196 bits (498), Expect = 4e-50 Identities = 100/130 (76%), Positives = 110/130 (84%) Frame = -2 Query: 586 INLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK 407 +NLVIVKKG+NDLPGLTD EKPRMRGPKRASKI+KLFNL K+DDVR+YVNTYRR+FTNKK Sbjct: 111 LNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKK 170 Query: 406 GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSE 227 GKT SKAPKIQRLVTPLT+Q KSEAAEYQKLLA RLKEQRDRRSE Sbjct: 171 GKTCSKAPKIQRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSE 230 Query: 226 SMAKRRSKLS 197 S+AK+RS+LS Sbjct: 231 SLAKKRSRLS 240
>RS6B_ARATH (P51430) 40S ribosomal protein S6-2| Length = 249 Score = 194 bits (494), Expect = 1e-49 Identities = 98/130 (75%), Positives = 110/130 (84%) Frame = -2 Query: 586 INLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK 407 +NLVIVKKG +DLPGLTDTEKPRMRGPKRASKI+KLFNLGK+DDVR+YVNTYRR+FTNKK Sbjct: 111 LNLVIVKKGVSDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKK 170 Query: 406 GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSE 227 GK VSKAPKIQRLVTPLT+Q S+AA+YQKLLA RLKEQRDRRSE Sbjct: 171 GKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSE 230 Query: 226 SMAKRRSKLS 197 S+AK+RS+LS Sbjct: 231 SLAKKRSRLS 240
>RS6A_ARATH (O48549) 40S ribosomal protein S6-1| Length = 250 Score = 193 bits (491), Expect = 3e-49 Identities = 98/130 (75%), Positives = 108/130 (83%) Frame = -2 Query: 586 INLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK 407 +NLVIVKKG+NDLPGLTDTEKPRMRGPKRASKI+KLFNL K+DDVR YVNTYRR FTNKK Sbjct: 111 LNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKK 170 Query: 406 GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSE 227 GK VSKAPKIQRLVTPLT+Q S+AA+YQKLLA RLKEQRDRRSE Sbjct: 171 GKEVSKAPKIQRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSE 230 Query: 226 SMAKRRSKLS 197 S+AK+RS+LS Sbjct: 231 SLAKKRSRLS 240
>RS6_TOBAC (P29345) 40S ribosomal protein S6 (Fragment)| Length = 199 Score = 145 bits (366), Expect = 8e-35 Identities = 81/130 (62%), Positives = 95/130 (73%) Frame = -2 Query: 586 INLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK 407 +NLVIVKKG+NDLPGLTDTEKPRMRGP+ + + L+ K+DDVR+YVNT T K Sbjct: 66 LNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALYF--KEDDVRKYVNTTAEFTTKWK 123 Query: 406 GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSE 227 G SKAPKIQRLVTPLT+Q KSEAAEYQKLLA RLKEQR++RSE Sbjct: 124 G---SKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQREKRSE 180 Query: 226 SMAKRRSKLS 197 S+AK+RS+LS Sbjct: 181 SLAKKRSRLS 190
>RS6_ICTPU (Q90YR8) 40S ribosomal protein S6| Length = 249 Score = 130 bits (328), Expect = 2e-30 Identities = 70/126 (55%), Positives = 87/126 (69%) Frame = -2 Query: 586 INLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK 407 +NLVI++KG+ D+PGLTD+ PR GPKRAS+I+KLFNL K+DDVRQYV RR T + Sbjct: 109 LNLVIIRKGEKDIPGLTDSTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRRPLTKEG 166 Query: 406 GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSE 227 K +KAPKIQRLVTP +Q K EAAEY KLLA+RLKE +++R E Sbjct: 167 KKPRTKAPKIQRLVTPRVLQHKRRRIALKRQRTQKNKDEAAEYAKLLAKRLKEAKEKRQE 226 Query: 226 SMAKRR 209 +AKRR Sbjct: 227 KIAKRR 232
>RS6_RAT (P62755) 40S ribosomal protein S6| Length = 249 Score = 130 bits (327), Expect = 3e-30 Identities = 73/127 (57%), Positives = 88/127 (69%), Gaps = 1/127 (0%) Frame = -2 Query: 586 INLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK 407 +NLVIVKKG+ D+PGLTDT PR GPKRAS+I+KLFNL K+DDVRQYV R NK+ Sbjct: 109 LNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRKPLNKE 165 Query: 406 GKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRS 230 GK +KAPKIQRLVTP +Q K EAAEY KLLA+R+KE +++R Sbjct: 166 GKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQ 225 Query: 229 ESMAKRR 209 E +AKRR Sbjct: 226 EQIAKRR 232
>RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33)| Length = 249 Score = 130 bits (327), Expect = 3e-30 Identities = 73/127 (57%), Positives = 88/127 (69%), Gaps = 1/127 (0%) Frame = -2 Query: 586 INLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK 407 +NLVIVKKG+ D+PGLTDT PR GPKRAS+I+KLFNL K+DDVRQYV R NK+ Sbjct: 109 LNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRKPLNKE 165 Query: 406 GKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRS 230 GK +KAPKIQRLVTP +Q K EAAEY KLLA+R+KE +++R Sbjct: 166 GKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQ 225 Query: 229 ESMAKRR 209 E +AKRR Sbjct: 226 EQIAKRR 232
>RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33)| Length = 249 Score = 130 bits (327), Expect = 3e-30 Identities = 73/127 (57%), Positives = 88/127 (69%), Gaps = 1/127 (0%) Frame = -2 Query: 586 INLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK 407 +NLVIVKKG+ D+PGLTDT PR GPKRAS+I+KLFNL K+DDVRQYV R NK+ Sbjct: 109 LNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRKPLNKE 165 Query: 406 GKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRS 230 GK +KAPKIQRLVTP +Q K EAAEY KLLA+R+KE +++R Sbjct: 166 GKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQ 225 Query: 229 ESMAKRR 209 E +AKRR Sbjct: 226 EQIAKRR 232
>RS6_ONCMY (Q9YGF2) 40S ribosomal protein S6| Length = 249 Score = 130 bits (326), Expect = 4e-30 Identities = 69/126 (54%), Positives = 87/126 (69%) Frame = -2 Query: 586 INLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK 407 +NLVI+KKG+ D+PGLTD+ PR GPKRASKI+KLFNL K+DDVRQYV RR T + Sbjct: 109 LNLVIIKKGEKDIPGLTDSTVPRRLGPKRASKIRKLFNLAKEDDVRQYV--VRRPLTKEG 166 Query: 406 GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSE 227 K +KAP+IQRLVTP +Q K EA+EY KLLA+R+KE +++R E Sbjct: 167 KKPRTKAPRIQRLVTPRVLQHKRRRIALKKQRTQKNKEEASEYAKLLAKRMKEAKEKRQE 226 Query: 226 SMAKRR 209 +AKRR Sbjct: 227 QIAKRR 232
>RS6_CHICK (P47838) 40S ribosomal protein S6| Length = 249 Score = 129 bits (324), Expect = 6e-30 Identities = 72/127 (56%), Positives = 88/127 (69%), Gaps = 1/127 (0%) Frame = -2 Query: 586 INLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK 407 +NLVIVKKG+ D+PGLTDT PR GPKRAS+I+KLFNL K+DDVRQYV R NK+ Sbjct: 109 LNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRKPLNKE 165 Query: 406 GKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRS 230 GK +KAPKIQRLVTP +Q K EAA+Y KLLA+R+KE +++R Sbjct: 166 GKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTQKNKEEAADYAKLLAKRMKEAKEKRQ 225 Query: 229 ESMAKRR 209 E +AKRR Sbjct: 226 EQIAKRR 232
>RS6_XENLA (P39017) 40S ribosomal protein S6| Length = 249 Score = 124 bits (311), Expect = 2e-28 Identities = 67/126 (53%), Positives = 84/126 (66%) Frame = -2 Query: 586 INLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK 407 +NLVIV+KG+ D+PGLTD PR GPKRAS+I+KLFNL K+DDVRQYV R+ + Sbjct: 109 LNLVIVRKGEKDIPGLTDNTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLAKEG 166 Query: 406 GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSE 227 K +KAPKIQRLVTP +Q K EA+EY KLLA+R KE +++R E Sbjct: 167 KKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTQKNKEEASEYAKLLAKRSKEAKEKRQE 226 Query: 226 SMAKRR 209 +AKRR Sbjct: 227 QIAKRR 232
>RS6_APLCA (Q9BMX5) 40S ribosomal protein S6| Length = 247 Score = 120 bits (301), Expect = 3e-27 Identities = 68/130 (52%), Positives = 85/130 (65%), Gaps = 2/130 (1%) Frame = -2 Query: 586 INLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK 407 ++LVI+KKG+ D+PGLTD PR GPKRASKI+KLFNL K+DDVRQYV RR + Sbjct: 109 LSLVIIKKGEQDIPGLTDKTIPRRLGPKRASKIRKLFNLSKEDDVRQYV--VRRPLPERD 166 Query: 406 GKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRS 230 GK SKAPKIQRLVTP+ +Q + + AEY KLLAQR+KE ++R+ Sbjct: 167 GKKAKSKAPKIQRLVTPVVLQRKRARMALKKKRVTKKREDHAEYTKLLAQRMKEAKERKM 226 Query: 229 E-SMAKRRSK 203 E + RSK Sbjct: 227 ERKRSNSRSK 236
>RS6_BRAFL (O01727) 40S ribosomal protein S6| Length = 244 Score = 114 bits (286), Expect = 2e-25 Identities = 67/128 (52%), Positives = 81/128 (63%), Gaps = 1/128 (0%) Frame = -2 Query: 586 INLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK 407 +NLVI+KKG+ D+PGLTDT PR GPKRA +I+KLFNL K+DDVRQYV RR K+ Sbjct: 109 LNLVILKKGEQDIPGLTDTTIPRRLGPKRAGRIRKLFNLNKEDDVRQYV--VRRPLPQKE 166 Query: 406 GKTVS-KAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRS 230 GK K PKIQRL+TP +Q + E A Y KLLA+R KE+R Sbjct: 167 GKKQKFKTPKIQRLITPQRLQRKRHMRAVKRRRYAKQREEEATYAKLLAKRKKEER---- 222 Query: 229 ESMAKRRS 206 E+ AKRRS Sbjct: 223 EAHAKRRS 230
>RS6_MANSE (Q94624) 40S ribosomal protein S6| Length = 253 Score = 113 bits (282), Expect = 5e-25 Identities = 66/129 (51%), Positives = 82/129 (63%), Gaps = 4/129 (3%) Frame = -2 Query: 580 LVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKKGK 401 LVIV+KG+ ++PGLTD PR GPKRASKI+KLFNL K+DDVR+YV + K+GK Sbjct: 111 LVIVRKGEQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV--VKALLPAKEGK 168 Query: 400 TVS----KAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRR 233 + KAPKIQRLVTP+ +Q KS A+Y KLLAQR KE + RR Sbjct: 169 ENAKPRYKAPKIQRLVTPVVLQRRRHRLALKKKRLAKRKSAEADYAKLLAQRKKESKVRR 228 Query: 232 SESMAKRRS 206 E + +RRS Sbjct: 229 QEEIKRRRS 237
>RS6_SPOFR (Q95V32) 40S ribosomal protein S6| Length = 253 Score = 112 bits (280), Expect = 8e-25 Identities = 65/129 (50%), Positives = 81/129 (62%), Gaps = 4/129 (3%) Frame = -2 Query: 580 LVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKKGK 401 LVIV+KG+ ++PGLTD PR GPKRASKI+KLFNL K+DDVR+YV +R K+GK Sbjct: 111 LVIVRKGEQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV--VKRLLPAKEGK 168 Query: 400 TVS----KAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRR 233 + KAPKIQRLVTP+ +Q K +Y KLLAQR KE + RR Sbjct: 169 ENAKPRYKAPKIQRLVTPVVLQRRRHRLALKKKRLAKRKQSENDYAKLLAQRKKESKVRR 228 Query: 232 SESMAKRRS 206 E + +RRS Sbjct: 229 QEELKRRRS 237
>RS6_DROME (P29327) 40S ribosomal protein S6| Length = 248 Score = 112 bits (279), Expect = 1e-24 Identities = 61/128 (47%), Positives = 81/128 (63%), Gaps = 1/128 (0%) Frame = -2 Query: 580 LVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKKG- 404 LV++KKG+ D+PGLTDT PR GPKRASKI+KL+NL K+DDVR++V RR K Sbjct: 111 LVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFV--VRRPLPAKDNK 168 Query: 403 KTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSES 224 K SKAPKIQRL+TP+ +Q K +A+Y KLL QR KE + +R E+ Sbjct: 169 KATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREEA 228 Query: 223 MAKRRSKL 200 +R + + Sbjct: 229 KRRRSASI 236
>RS6_YARLI (Q6C169) 40S ribosomal protein S6| Length = 242 Score = 108 bits (271), Expect = 9e-24 Identities = 60/129 (46%), Positives = 79/129 (61%) Frame = -2 Query: 586 INLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK 407 +++VIVK+G D+ GLT PR GPKRA+ I+KLF L K+DDVRQYV RR T K Sbjct: 109 LSVVIVKQGDADIEGLTTETVPRRLGPKRANNIRKLFALSKEDDVRQYV--IRREVTTKS 166 Query: 406 GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSE 227 GKT +KAPKIQRL+TP + K AAEY +LLA+R+ E++ ++E Sbjct: 167 GKTYTKAPKIQRLITPRRLAHKAQLREKKVKAIQASKDAAAEYAQLLAKRVAEKKSEKAE 226 Query: 226 SMAKRRSKL 200 +R S L Sbjct: 227 EKKRRASSL 235
>RS6A_SCHPO (P05752) 40S ribosomal protein S6-A| Length = 239 Score = 107 bits (268), Expect = 2e-23 Identities = 60/129 (46%), Positives = 80/129 (62%), Gaps = 2/129 (1%) Frame = -2 Query: 580 LVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK-- 407 L I+K+G+ D+PGLTD P+ GPKRASKI++ FNL K+DDVRQ+V RR KK Sbjct: 111 LAIIKQGEQDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV--IRREVVPKKEG 168 Query: 406 GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSE 227 K +KAPKIQRLVTP T+Q + EAAE+ +L+A+R+ E + +R Sbjct: 169 KKPYTKAPKIQRLVTPRTLQHKRHRFALKRRQAEKNREEAAEFAQLMAKRVAEAKQKREV 228 Query: 226 SMAKRRSKL 200 A+R S L Sbjct: 229 VKARRASSL 237
>RS6_AEDAE (Q9U761) 40S ribosomal protein S6| Length = 346 Score = 106 bits (265), Expect = 4e-23 Identities = 59/129 (45%), Positives = 78/129 (60%), Gaps = 1/129 (0%) Frame = -2 Query: 580 LVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKKGK 401 L++VKKG+ D+PGLTDT PR GPKRAS I+KL+NL K+DDVRQ+V +R K GK Sbjct: 111 LIVVKKGEKDIPGLTDTTVPRRLGPKRASNIRKLYNLTKEDDVRQFV--VKRPLPEKDGK 168 Query: 400 TV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSES 224 +KAPKIQRL+TP+ +Q K AEY K+L R +++R RR Sbjct: 169 KARTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILHLRRRQERIRRRSR 228 Query: 223 MAKRRSKLS 197 ++ R S Sbjct: 229 LSSMRDSRS 237
>RS6B_SCHPO (Q9C0Z7) 40S ribosomal protein S6-B| Length = 239 Score = 106 bits (264), Expect = 6e-23 Identities = 59/129 (45%), Positives = 80/129 (62%), Gaps = 2/129 (1%) Frame = -2 Query: 580 LVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK-- 407 L IVK+G+ D+PGLTD P+ GPKRASKI++ FNL K+DDVRQ+V RR KK Sbjct: 111 LAIVKQGEQDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV--IRREVVPKKEG 168 Query: 406 GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSE 227 K +KAPKIQRLVTP T+Q + EAAE+ +L+A+R+ E + ++ Sbjct: 169 KKPYTKAPKIQRLVTPRTLQHKRHRFALKRRQAEKNREEAAEFAQLMAKRVAEAKQKKEV 228 Query: 226 SMAKRRSKL 200 A+R S + Sbjct: 229 VKARRASSM 237
>RS6_YEAST (P02365) 40S ribosomal protein S6 (S10) (YS4) (RP9)| Length = 236 Score = 104 bits (260), Expect = 2e-22 Identities = 61/127 (48%), Positives = 78/127 (61%) Frame = -2 Query: 580 LVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKKGK 401 LVIVKKG+ +L GLTDT P+ GPKRA+ I+K F L K+DDVR +V RR T K K Sbjct: 111 LVIVKKGEQELEGLTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDFV--IRREVT-KGEK 167 Query: 400 TVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESM 221 T +KAPKIQRLVTP +Q + AAEY +LLA+RL E++ ++E Sbjct: 168 TYTKAPKIQRLVTPQRLQRKRHQRALKVRNAQAQREAAAEYAQLLAKRLSERKAEKAEIR 227 Query: 220 AKRRSKL 200 +R S L Sbjct: 228 KRRASSL 234
>RS6_CAEEL (Q9NEN6) 40S ribosomal protein S6| Length = 246 Score = 103 bits (257), Expect = 4e-22 Identities = 61/130 (46%), Positives = 81/130 (62%) Frame = -2 Query: 586 INLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK 407 ++LVIVKKG ++ GLTD+ PR GPKRASKI+KLFNL K DDV +YV T+ ++F + Sbjct: 109 LSLVIVKKGDGEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDKTFPDGV 168 Query: 406 GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSE 227 KT+ APKIQRL+TP I + +AA Y KLLA+ KE+ D + Sbjct: 169 TKTI--APKIQRLITPARIARKKYLLRQKRNQKIKMRDDAAAYHKLLAKYSKEEHDAK-- 224 Query: 226 SMAKRRSKLS 197 +A+RRS S Sbjct: 225 -IARRRSSAS 233
>RS6_AEDAL (Q9U762) 40S ribosomal protein S6| Length = 349 Score = 103 bits (257), Expect = 4e-22 Identities = 59/129 (45%), Positives = 77/129 (59%), Gaps = 1/129 (0%) Frame = -2 Query: 580 LVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKKGK 401 L++VKKG+ D+PGLTDT R GPKRAS I+KL+NL K+DDVRQYV +R K GK Sbjct: 111 LIVVKKGEKDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYV--VKRPLPEKDGK 168 Query: 400 TV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSES 224 +KAPKIQRL+TP+ +Q K AEY K+L R +++R RR Sbjct: 169 KPRTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILHLRRRQERIRRRSR 228 Query: 223 MAKRRSKLS 197 ++ R S Sbjct: 229 LSSMRDSRS 237
>RS6_DEBHA (Q6BXH8) 40S ribosomal protein S6| Length = 236 Score = 103 bits (256), Expect = 5e-22 Identities = 60/127 (47%), Positives = 77/127 (60%) Frame = -2 Query: 580 LVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKKGK 401 L +VK+G +D+ GLTDT P+ GPKRA+ I+K F L K+DDVRQ+V RR K K Sbjct: 111 LSVVKQGDSDIEGLTDTTTPKRLGPKRANNIRKFFGLTKEDDVRQFV--VRREVV-KGDK 167 Query: 400 TVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESM 221 +KAPKIQRLVTP T+Q + AAEY +LLAQRL E++ R+E Sbjct: 168 KYTKAPKIQRLVTPQTLQRKRALKAQKVKNAQQQRDAAAEYAQLLAQRLHERKAERAEIK 227 Query: 220 AKRRSKL 200 +R S L Sbjct: 228 KRRASSL 234
>RS6_CANGA (Q6FJH3) 40S ribosomal protein S6| Length = 236 Score = 102 bits (253), Expect = 1e-21 Identities = 59/129 (45%), Positives = 80/129 (62%) Frame = -2 Query: 586 INLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK 407 ++LVIVKKG+ +L G+TD P+ GPKRA+ I+K F L K+DDVR +V RR T K Sbjct: 109 LSLVIVKKGEQELEGVTDATVPKRLGPKRANHIRKFFGLTKEDDVRDFV--IRREVT-KG 165 Query: 406 GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSE 227 KT +KAPKIQRLVTP +Q + AAEY +LLA+RL E++ ++E Sbjct: 166 EKTYTKAPKIQRLVTPQRLQRKRYQRNLKVRNAQAQREAAAEYAQLLAKRLAERKAEKAE 225 Query: 226 SMAKRRSKL 200 + +R S L Sbjct: 226 TRKRRASSL 234
>RS6_KLULA (Q6CM04) 40S ribosomal protein S6| Length = 236 Score = 96.7 bits (239), Expect = 4e-20 Identities = 55/127 (43%), Positives = 76/127 (59%) Frame = -2 Query: 580 LVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKKGK 401 L+I KKG+ ++ G+T+ P+ GPKRA+ I+K F L K+DDVR YV RR T K K Sbjct: 111 LIITKKGEQEIEGITNDTVPKRLGPKRANNIRKFFGLTKEDDVRDYV--IRREVT-KGDK 167 Query: 400 TVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESM 221 + +KAPKIQRLVTP +Q + AAEY +LLA+RL E++ ++E Sbjct: 168 SYTKAPKIQRLVTPQRLQRKRQQKSLKIKNAQAQREAAAEYAQLLAKRLSERKAEKAEVR 227 Query: 220 AKRRSKL 200 +R S L Sbjct: 228 KRRASSL 234
>RS6_ASHGO (Q74ZK3) 40S ribosomal protein S6| Length = 236 Score = 96.3 bits (238), Expect = 6e-20 Identities = 55/127 (43%), Positives = 74/127 (58%) Frame = -2 Query: 580 LVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKKGK 401 L+I KKG ++ G+T+ P+ GPKRA+ I+K F L KDDDVR +V RR K K Sbjct: 111 LIITKKGDQEIEGITNESVPKRLGPKRANNIRKFFGLTKDDDVRDFV--IRREVV-KGDK 167 Query: 400 TVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESM 221 T +KAPKIQRLVTP +Q + AAEY +LLA+RL E++ ++E Sbjct: 168 TYTKAPKIQRLVTPQRLQRKRHQRALKVRNAQAQREAAAEYAQLLAKRLTEKKAEKAEER 227 Query: 220 AKRRSKL 200 +R S L Sbjct: 228 KRRASSL 234
>RS6_KLUMA (P41798) 40S ribosomal protein S6 (Ribosomal protein S10)| Length = 235 Score = 94.4 bits (233), Expect = 2e-19 Identities = 59/127 (46%), Positives = 75/127 (59%) Frame = -2 Query: 580 LVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKKGK 401 LVIVKKG ++ G+T+ P+ GPKRA+ I+K F L K+DDVR YV RR T K K Sbjct: 111 LVIVKKGDQEIEGVTNETVPKRLGPKRANNIRKFFGLTKEDDVRDYV--IRREVT-KGEK 167 Query: 400 TVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRDRRSESM 221 T +KAPKIQRLVTP +Q + AAEY +LLA+RL E R++E Sbjct: 168 TYTKAPKIQRLVTPQRLQRKRQQKALKIKNAQAQREAAAEYAQLLAKRLAE---RKAEVR 224 Query: 220 AKRRSKL 200 +R S L Sbjct: 225 KRRASSL 231
>RS6_LEIMA (Q9NE83) 40S ribosomal protein S6| Length = 249 Score = 84.7 bits (208), Expect = 2e-16 Identities = 51/126 (40%), Positives = 65/126 (51%), Gaps = 2/126 (1%) Frame = -2 Query: 586 INLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK 407 +N+ I K G + G+TDT PR GPKRASKI+KLFNL + +DVR+YV RR Sbjct: 112 VNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYV--VRRRVVKSG 169 Query: 406 GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA--QRLKEQRDRR 233 K KAPKIQRL+TP +E EY +L+A +R QRD Sbjct: 170 KKDRLKAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERREYLRLIASNRRALRQRDHS 229 Query: 232 SESMAK 215 + K Sbjct: 230 KKHTRK 235
>RS6_LEIIN (O44012) 40S ribosomal protein S6| Length = 249 Score = 84.7 bits (208), Expect = 2e-16 Identities = 51/126 (40%), Positives = 65/126 (51%), Gaps = 2/126 (1%) Frame = -2 Query: 586 INLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK 407 +N+ I K G + G+TDT PR GPKRASKI+KLFNL + +DVR+YV RR Sbjct: 112 VNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYV--VRRRVVKSG 169 Query: 406 GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA--QRLKEQRDRR 233 K KAPKIQRL+TP +E EY +L+A +R QRD Sbjct: 170 KKDRLKAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERREYLRLIASNRRALRQRDHS 229 Query: 232 SESMAK 215 + K Sbjct: 230 KKHTQK 235
>RS6_ENCCU (Q8SRY0) 40S ribosomal protein S6| Length = 203 Score = 35.8 bits (81), Expect = 0.094 Identities = 20/71 (28%), Positives = 38/71 (53%) Frame = -2 Query: 586 INLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKK 407 +NL+I++ G+ ++ GLT+ P++ K++K+F G D+ + V Y R+ + Sbjct: 94 LNLIILRPGEKEIDGLTNAVNDVSHLPRKEKKLRKMF--GVPDEEKNVVG-YIRNILKSE 150 Query: 406 GKTVSKAPKIQ 374 K PKI+ Sbjct: 151 CDDPKKIPKIR 161
>YBK7_YEAST (P38162) Protein YBL107C| Length = 196 Score = 32.3 bits (72), Expect = 1.0 Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = -2 Query: 556 NDLPGLTDTEKPRMR--GPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKKGK 401 ND P LT R R P + G DD +RQ +N YR+ N K K Sbjct: 23 NDEPSLTTITVTRERCVDPSLIDSFLRFLRHGSDDIIRQKLNNYRKGSINGKNK 76
>GDA6_WHEAT (P04726) Alpha/beta-gliadin clone PW1215 precursor (Prolamin)| Length = 296 Score = 29.3 bits (64), Expect = 8.8 Identities = 16/45 (35%), Positives = 20/45 (44%) Frame = +1 Query: 160 HLKQRQQEPW*QQKASTSSWPCSHSCGLFAPSTSVQAASGTLQPQ 294 H +QRQQ+P Q G F PS A G++QPQ Sbjct: 211 HQQQRQQQPSSQVSLQQPQQQYPSGQGFFQPSQQNPQAQGSVQPQ 255
>MNTB_BACHD (Q9KD30) Manganese transport system ATP-binding protein mntB| Length = 250 Score = 29.3 bits (64), Expect = 8.8 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +2 Query: 386 SLAHGLALLVREGPAVCVDILADIIILAKVEELLDLGSPFGSPHPGLLSVSQAWQIILAL 565 +LA L + P V +D+ ++ IIL+ ++EL D G H L V + + +L L Sbjct: 150 ALAQESELFFLDEPFVGIDVTSESIILSLLQELRDRGKTIFVVHHDLSKVEKYFDQVLML 209 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,935,616 Number of Sequences: 219361 Number of extensions: 1206234 Number of successful extensions: 3924 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3788 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3889 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
