ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags6d11 |
|---|---|
| Clone Library Name | barley_pub |
>PA2G4_HUMAN (Q9UQ80) Proliferation-associated protein 2G4 (Cell cycle protein| p38-2G4 homolog) (hG4-1) (ErbB3-binding protein 1) Length = 393 Score = 159 bits (402), Expect = 8e-39 Identities = 92/195 (47%), Positives = 118/195 (60%), Gaps = 4/195 (2%) Frame = -2 Query: 699 IDGNKVVLSVSNADTKVDD--AEFEENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDK 526 IDG K ++ K D AEFE +EVYA+D++ S+GEGK K ++ TTIYKR K Sbjct: 194 IDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQR-TTIYKRDPSK 252 Query: 525 NYHLKMKASRFIFSEISQKFPIMPFTARALE-EKRARLGLVECMNHELLQPYPVLHEKQG 349 Y LKMK SR FSE+ ++F MPFT RA E EK+AR+G+VEC HELLQP+ VL+EK+G Sbjct: 253 QYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEG 312 Query: 348 DLVAHIKFTVLLMPNGSDKITSHPLQ-QLEPSKSIEDDAEIKAWLALGTKSXXXXXXXXX 172 + VA KFTVLLMPNG +ITS P + L S+ DAE+KA L Sbjct: 313 EFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALLQSSASRKTQKKKKKK 372 Query: 171 XXXXGDAAEAAEPME 127 + A + E +E Sbjct: 373 ASKTAENATSGETLE 387
>PA2G4_MOUSE (P50580) Proliferation-associated protein 2G4| (Proliferation-associated protein 1) (Protein p38-2G4) (Mpp1) (IRES-specific cellular trans-acting factor 45 kDa) (ITAF45) Length = 393 Score = 159 bits (401), Expect = 1e-38 Identities = 92/195 (47%), Positives = 118/195 (60%), Gaps = 4/195 (2%) Frame = -2 Query: 699 IDGNKVVLSVSNADTKVDD--AEFEENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDK 526 IDG K ++ K D AEFE +EVYA+D++ S+GEGK K ++ TTIYKR K Sbjct: 194 IDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQR-TTIYKRDPSK 252 Query: 525 NYHLKMKASRFIFSEISQKFPIMPFTARALE-EKRARLGLVECMNHELLQPYPVLHEKQG 349 Y LKMK SR FSE+ ++F MPFT RA E EK+AR+G+VEC HELLQP+ VL+EK+G Sbjct: 253 QYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEG 312 Query: 348 DLVAHIKFTVLLMPNGSDKITSHPLQ-QLEPSKSIEDDAEIKAWLALGTKSXXXXXXXXX 172 + VA KFTVLLMPNG +ITS P + L S+ DAE+KA L Sbjct: 313 EFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALLQSSASRKTQKKKKKK 372 Query: 171 XXXXGDAAEAAEPME 127 + A + E +E Sbjct: 373 ASKTVENATSGETLE 387
>CDB4_SCHPO (Q09184) Curved DNA-binding protein (42 kDa protein)| Length = 381 Score = 97.1 bits (240), Expect = 5e-20 Identities = 64/165 (38%), Positives = 93/165 (56%), Gaps = 4/165 (2%) Frame = -2 Query: 699 IDGNK-VVLSVSNAD-TKVDDAEFEENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDK 526 IDG K V+L+ S++ +++D FEE EVY +DI+ ST + T IYK+ D Sbjct: 197 IDGKKQVILNPSDSQRSEMDTFTFEEGEVYGVDILVSTSPSGKVKRSDIATRIYKKT-DT 255 Query: 525 NYHLKMKASRFIFSEISQKFPIMPFTARALE-EKRARLGLVECMNHELLQPYPVLHEKQG 349 Y LK++ASR ++SEI KF PF+ R + + R +GL EC +H+LL PY VL +K G Sbjct: 256 TYMLKLQASRKVYSEIQTKFGPFPFSTRNISFDSRTNMGLNECTSHKLLFPYEVLLDKDG 315 Query: 348 DLVAHIKFTVLLMPNGSDKIT-SHPLQQLEPSKSIEDDAEIKAWL 217 +VA T+ L G+ ++ S P + S +D EI A L Sbjct: 316 GIVAEFYSTIALTKKGTIILSDSEPKEDFIKSDKKVEDPEIVALL 360
>ARX1_SCHPO (O60180) Probable metalloprotease arx1 (EC 3.-.-.-) (Associated| with ribosomal export complex protein 1) Length = 417 Score = 61.6 bits (148), Expect = 2e-09 Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 5/136 (3%) Frame = -2 Query: 624 EVYAIDI-VTSTGEGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEISQKFPIMPFT 448 E + IDI ++S K + + T+Y V+ +Y LK+KASR + SEI ++ + PF Sbjct: 263 EAWLIDISMSSQPISSLKEHPDLKPTLYIHDVNVSYMLKLKASRSLLSEIKKEKSVFPFH 322 Query: 447 ARALEEKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDKI----TSH 280 +L +R LGL E + +L P PVL +++A + TV+ PN S + Sbjct: 323 FGSLSSERNLLGLRELTDRHILVPMPVLISSPSNVIAREELTVITQPNPSSDLLCLTVPT 382 Query: 279 PLQQLEPSKSIEDDAE 232 P ++ S+ED + Sbjct: 383 PPSYVKSDFSLEDGTD 398
>AMPM_METTH (O27355) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 299 Score = 51.2 bits (121), Expect = 3e-06 Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 4/135 (2%) Frame = -2 Query: 678 LSVSNADTKVDDAEFEENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKNYHLKMKAS 499 LS+ N + + + + EE +V AI+ + G G + D QT I++ ++ L++ + Sbjct: 169 LSIPNINER-NTHQLEEGDVLAIEPFATDGVGL--VTDMPQTYIFRFLRERP--LRLVHA 223 Query: 498 RFIFSEISQKFPIMPFTARALEE----KRARLGLVECMNHELLQPYPVLHEKQGDLVAHI 331 R + +I +++ +PF R LEE KR + + + PY VL EK G +VA Sbjct: 224 RRVLGKIREEYHALPFAQRWLEEYFDAKRLNASMRMLIQSRAIYPYHVLREKSGAMVAQW 283 Query: 330 KFTVLLMPNGSDKIT 286 + TV++ +G IT Sbjct: 284 EHTVIVEEDGCTVIT 298
>AMPM_PYRHO (O58362) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 295 Score = 50.8 bits (120), Expect = 4e-06 Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 4/126 (3%) Frame = -2 Query: 678 LSVSNADTKVDDAEFEENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKNYHLKMKAS 499 +S+ N D+ +E +V+AI+ +TG G+ +++ T IY D ++M + Sbjct: 164 VSIPNIYRPHDNYVLQEGDVFAIEPFATTGAGQ--VIEVPPTLIYMYVRDAP--VRMAQA 219 Query: 498 RFIFSEISQKFPIMPFTARALE----EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHI 331 RF+ ++I +++ +PF R L+ E + +L L L YPVL E +G +V Sbjct: 220 RFLLAKIKREYKTLPFAYRWLQGEMPEGQLKLALRSLERSGALYGYPVLREIRGGMVTQF 279 Query: 330 KFTVLL 313 + T+++ Sbjct: 280 EHTIIV 285
>AMP2B_ARATH (Q56Y85) Methionine aminopeptidase 2B (EC 3.4.11.18) (MetAP 2B)| (MAP 2B) (Peptidase M 2B) Length = 439 Score = 49.7 bits (117), Expect = 9e-06 Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 4/118 (3%) Frame = -2 Query: 648 DDAEFEENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKNY-HLKMKASRFIFSEISQ 472 + + EE E YAI+ STG+G + ++ + + Y + D + L++ ++ + + I++ Sbjct: 312 EQTKMEEGEFYAIETFGSTGKGYVR--EDLECSHYMKNFDAGHVPLRLPRAKQLLATINK 369 Query: 471 KFPIMPFTARALE---EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMP 307 F + F R L+ E + + L + ++QPYP L + +G V+ + T+LL P Sbjct: 370 NFSTLAFCRRYLDRIGETKYLMALKNLCDSGIVQPYPPLCDVKGSYVSQFEHTILLRP 427
>AMPM_PYRAB (Q9UYT4) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 295 Score = 49.3 bits (116), Expect = 1e-05 Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 4/126 (3%) Frame = -2 Query: 678 LSVSNADTKVDDAEFEENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKNYHLKMKAS 499 +S+ N D+ + E +V+AI+ +TG G+ +++ T IY D ++M + Sbjct: 164 ISIPNIYRPHDNYKLREGDVFAIEPFATTGAGQ--VIEVPPTLIYMYVRDAP--VRMVQA 219 Query: 498 RFIFSEISQKFPIMPFTARALE----EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHI 331 RF+ ++I +++ +PF R L+ E + +L L L YPVL E + LV Sbjct: 220 RFLLAKIKREYKTLPFAYRWLQGEMPEGQLKLALRTLEKSGALYGYPVLREIRNGLVTQF 279 Query: 330 KFTVLL 313 + T+++ Sbjct: 280 EHTIIV 285
>AMPM2_YEAST (P38174) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) Length = 421 Score = 48.5 bits (114), Expect = 2e-05 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 4/133 (3%) Frame = -2 Query: 699 IDGNKVVLSVSNADTKVDDAEFEENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKNY 520 I G K V V N DT + EE E +AI+ STG G E + Y R+ + + Sbjct: 281 IHGGKSVPIVKNGDT----TKMEEGEHFAIETFGSTGRGYVTAGGE--VSHYARSAEDHQ 334 Query: 519 HLK-MKASRFIFSEISQKFPIMPFTARALE---EKRARLGLVECMNHELLQPYPVLHEKQ 352 + + +++ + I + F +PF R L+ +++ L + H L+Q YP L++ Sbjct: 335 VMPTLDSAKNLLKTIDRNFGTLPFCRRYLDRLGQEKYLFALNNLVRHGLVQDYPPLNDIP 394 Query: 351 GDLVAHIKFTVLL 313 G A + T+LL Sbjct: 395 GSYTAQFEHTILL 407
>ARX1_YARLI (Q6CCY2) Probable metalloprotease ARX1 (EC 3.-.-.-) (Associated| with ribosomal export complex protein 1) Length = 484 Score = 48.1 bits (113), Expect = 3e-05 Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 11/115 (9%) Frame = -2 Query: 633 EENEVYAIDIVTSTGEGKPKL-------LDEKQTTI--YKRAVDKNYHLKMKASRFIFSE 481 E E Y +DI + K + DE T I Y R Y LK++ASR + S+ Sbjct: 280 EAGEAYQVDIQMAAAPQKGAIRLYDFQGYDESGTVINQYGRDFSVTYGLKIQASRKLLSQ 339 Query: 480 ISQKFPIMPFTARALEEK--RARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFT 322 + + PF +E +ARLGL E + H++L P PV K L A +F+ Sbjct: 340 LEATTSVYPFKLSHVESNVAKARLGLGEILAHQILVPIPVKVAKFVPLAALYEFS 394
>AMPM2_RAT (P38062) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (Initiation factor 2-associated 67 kDa glycoprotein) (p67) (p67eIF2) Length = 478 Score = 47.8 bits (112), Expect = 3e-05 Identities = 31/120 (25%), Positives = 62/120 (51%), Gaps = 4/120 (3%) Frame = -2 Query: 633 EENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKNY-HLKMKASRFIFSEISQKFPIM 457 EE EVYAI+ STG+G + D+ + + Y + D + +++ ++ + + I++ F + Sbjct: 356 EEGEVYAIETFGSTGKGV--VHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTL 413 Query: 456 PFTARALE---EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDKIT 286 F R L+ E + + L + ++ PYP L + +G A + T+LL P + ++ Sbjct: 414 AFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVS 473
>AMPM2_MOUSE (O08663) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (Initiation factor 2-associated 67 kDa glycoprotein) (p67) (p67eIF2) Length = 478 Score = 47.8 bits (112), Expect = 3e-05 Identities = 31/120 (25%), Positives = 62/120 (51%), Gaps = 4/120 (3%) Frame = -2 Query: 633 EENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKNY-HLKMKASRFIFSEISQKFPIM 457 EE EVYAI+ STG+G + D+ + + Y + D + +++ ++ + + I++ F + Sbjct: 356 EEGEVYAIETFGSTGKGV--VHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTL 413 Query: 456 PFTARALE---EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDKIT 286 F R L+ E + + L + ++ PYP L + +G A + T+LL P + ++ Sbjct: 414 AFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVS 473
>AMPM2_HUMAN (P50579) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (Initiation factor 2-associated 67 kDa glycoprotein) (p67) (p67eIF2) Length = 478 Score = 47.8 bits (112), Expect = 3e-05 Identities = 31/120 (25%), Positives = 62/120 (51%), Gaps = 4/120 (3%) Frame = -2 Query: 633 EENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKNY-HLKMKASRFIFSEISQKFPIM 457 EE EVYAI+ STG+G + D+ + + Y + D + +++ ++ + + I++ F + Sbjct: 356 EEGEVYAIETFGSTGKGV--VHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTL 413 Query: 456 PFTARALE---EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDKIT 286 F R L+ E + + L + ++ PYP L + +G A + T+LL P + ++ Sbjct: 414 AFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVS 473
>AMP2A_ARATH (Q9FV49) Methionine aminopeptidase 2A (EC 3.4.11.18) (MetAP 2A)| (MAP 2A) (Peptidase M 2A) Length = 441 Score = 44.7 bits (104), Expect = 3e-04 Identities = 28/125 (22%), Positives = 65/125 (52%), Gaps = 4/125 (3%) Frame = -2 Query: 648 DDAEFEENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKNY-HLKMKASRFIFSEISQ 472 + + EE E+YAI+ STG+G + ++ + + Y + D + L++ ++ + + I++ Sbjct: 314 EQTKMEEGELYAIETFGSTGKGYVR--EDLECSHYMKNYDVGHVPLRLPRAKQLLATINK 371 Query: 471 KFPIMPFTARALE---EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNG 301 F + F R L+ E + + L + +++P P + + +G ++ + T+LL P Sbjct: 372 NFSTLAFCRRYLDRLGETKYLMALKNLCDSGIIEPCPPVCDVKGSYISQFEHTILLRPTC 431 Query: 300 SDKIT 286 + I+ Sbjct: 432 KEIIS 436
>AMPM_METJA (Q58725) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 294 Score = 44.7 bits (104), Expect = 3e-04 Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 1/114 (0%) Frame = -2 Query: 624 EVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEISQKFPIMPFTA 445 ++ AI+ + G G K D IYK + +++ +R + IS+ +P +PF Sbjct: 184 DLVAIEPFATDGFGMVK--DGNLGNIYKFLAKRP--IRLPQARKLLDVISKNYPYLPFAE 239 Query: 444 R-ALEEKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDKIT 286 R L+ + RL L + + YP+L E++ +V + T+L+ NG + T Sbjct: 240 RWVLKNESERLALNSLIRASCIYGYPILKERENGIVGQAEHTILITENGVEITT 293
>AMPM_PYRFU (P56218) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 295 Score = 44.3 bits (103), Expect = 4e-04 Identities = 31/126 (24%), Positives = 64/126 (50%), Gaps = 4/126 (3%) Frame = -2 Query: 678 LSVSNADTKVDDAEFEENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKNYHLKMKAS 499 +S+ N D+ +E +V+AI+ + G G+ +++ T IY D +++ + Sbjct: 164 ISIPNIYRPHDNYVLKEGDVFAIEPFATIGAGQ--VIEVPPTLIYMYVRD--VPVRVAQA 219 Query: 498 RFIFSEISQKFPIMPFTARALE----EKRARLGLVECMNHELLQPYPVLHEKQGDLVAHI 331 RF+ ++I +++ +PF R L+ E + +L L + YPVL E + +VA Sbjct: 220 RFLLAKIKREYGTLPFAYRWLQNDMPEGQLKLALKTLEKAGAIYGYPVLKEIRNGIVAQF 279 Query: 330 KFTVLL 313 + T+++ Sbjct: 280 EHTIIV 285
>AMPM2_ENCIN (Q6XMH7) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (MetAP2) (MAP-2) Length = 358 Score = 42.7 bits (99), Expect = 0.001 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 5/143 (3%) Frame = -2 Query: 699 IDGNKVVLSVSNADTKVDDAEFEENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKNY 520 I G + +V+N DT + + YA++ +TG+G + D + + V K+ Sbjct: 217 IHGGISIPAVNNRDT----TRIKGDTFYAVETFATTGKGF--INDRSPCSHFMLNVHKSR 270 Query: 519 HLKMKASRFIFSEISQKFPIMPFTARALEEKR-ARLGLVECMN----HELLQPYPVLHEK 355 L K ++ + F +PF+ R L+ G ++ +N L PYP L++ Sbjct: 271 KLFNKDLIKVYEFVKSSFGTLPFSPRHLDHYNLVEGGSLKSVNLLTMMGLFTPYPPLNDI 330 Query: 354 QGDLVAHIKFTVLLMPNGSDKIT 286 G VA + TV L NG + +T Sbjct: 331 DGSKVAQFEHTVYLSENGKEILT 353
>AMPM_ARCFU (O28438) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 291 Score = 41.2 bits (95), Expect = 0.003 Identities = 31/112 (27%), Positives = 56/112 (50%) Frame = -2 Query: 633 EENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEISQKFPIMP 454 EE V AI+ + G GK + + + IY + ++MK +R I E+ + + +P Sbjct: 180 EEGMVVAIEPFATNGVGK--VGERGECEIYSLLNPRP--VRMKMAREILKEVEENYKTLP 235 Query: 453 FTARALEEKRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGS 298 F R L +K + + + +L+ YPVL E G LV+ + T+++ G+ Sbjct: 236 FAKRWL-KKAPDIIISKLAREGVLRAYPVLTEVSGGLVSQWEHTLIVEDGGA 286
>ARX1_CANAL (Q5AI37) Probable metalloprotease ARX1 (EC 3.-.-.-) (Associated| with ribosomal export complex protein 1) Length = 564 Score = 40.0 bits (92), Expect = 0.007 Identities = 39/152 (25%), Positives = 59/152 (38%), Gaps = 42/152 (27%) Frame = -2 Query: 696 DGNKVVLSVSNADTKVDDAEFEENEVYAIDI------------VTSTGE-----GKPKLL 568 D NK V + +++ DD EVY IDI + +T E GK Sbjct: 272 DSNKPVQTNNSSAIPTDDFVVVPGEVYQIDIRMTGLSDVNEIGIVTTEEIDHFTGKNNKQ 331 Query: 567 D-EKQTTIYKRAVDKNYHLKMKASRFIFSEISQKFPIMPF-------------------- 451 D +++I+ R + LK+K S+ + EI ++F + PF Sbjct: 332 DFNAKSSIFIRDFAVTHQLKLKTSKKLLGEIDRQFSVYPFKLDYASKNFPINTESSEDEI 391 Query: 450 ----TARALEEKRARLGLVECMNHELLQPYPV 367 A + K RLG E N L+QP P+ Sbjct: 392 KQQIAAIGQDMKSNRLGAAELSNRHLIQPKPI 423
>YD43_CAEEL (P50581) Hypothetical protein T27A8.3 in chromosome X| Length = 182 Score = 36.2 bits (82), Expect = 0.098 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Frame = -2 Query: 648 DDAEFEENEVYAIDIVTSTGEGKPKLLDEKQTTIYKR---AVDKNYHLKMKASRFIFSEI 478 + A EENE+YAI+ STG+G D+ +T+ Y + D+ L+++ S+ + I Sbjct: 66 EQARMEENEIYAIETFGSTGKG--YFHDDMETSHYMKNFELADEKIPLRLQKSKGLLKLI 123 Query: 477 SQKFPIMPF 451 + F + F Sbjct: 124 DKNFATLAF 132
>ARX1_DEBHA (Q6BI90) Probable metalloprotease ARX1 (EC 3.-.-.-) (Associated| with ribosomal export complex protein 1) Length = 564 Score = 35.0 bits (79), Expect = 0.22 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 19/121 (15%) Frame = -2 Query: 672 VSNADTKV-DDAEFEENEVYAIDIVTS-TGEGKPKLLDEKQTTIYKRAVDKNYHLKMKAS 499 V N D K+ ++F+E + ++ + TG + ++TIY R NY L++K S Sbjct: 304 VYNVDIKMCSTSDFKELGLVTLEEIDEFTGLNNKTNEFKTKSTIYIRDYAVNYQLRLKNS 363 Query: 498 RFIFSEISQKFPIMPF----------------TARALEEKRA-RLGLVECMNHELLQPYP 370 R + +I ++F + PF A +E A +LGL E N L+ P Sbjct: 364 RSLLGKIDKEFTVFPFKLSHTSPSFPATNSQDLATLKKELIANKLGLSELANRHLINAKP 423 Query: 369 V 367 + Sbjct: 424 I 424
>MASS1_BRARE (Q6JAN0) Monogenic audiogenic seizure susceptibility protein 1| homolog precursor (Very large G-protein coupled receptor 1) Length = 6199 Score = 31.6 bits (70), Expect = 2.4 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -2 Query: 492 IFSEISQKFPIMPFTARALEEKRARLGLVECMNHELLQPYPVL 364 IF+++S KF +P TAR E+ R V + E +P P+L Sbjct: 2131 IFADVSVKFRAVPLTARVGEDYRVASSDVVLLEGESSKPVPIL 2173
>RPOC_LISGR (P77882) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 1053 Score = 30.4 bits (67), Expect = 5.4 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 12/98 (12%) Frame = -2 Query: 633 EENEVYAIDIVTSTGEG---KPKLLDEKQTTIYKRAVDKNYHLKM--KASRFIFSEI--- 478 EE +A +VT G+ K +LL EK+ +Y+ KN+H M +A + I S+I Sbjct: 126 EEIIYFASYVVTEPGDTPLEKKQLLSEKEYRVYREKYGKNFHAGMGAEAIKKILSDIDLE 185 Query: 477 --SQKFPIMPFTARALEEKRA--RLGLVECMNHELLQP 376 +Q+ TA+ RA RL ++E + +P Sbjct: 186 KETQELKAELQTAQGQRRTRAIRRLEVMEAFRNSGNEP 223
>RPA1_SCHPO (P15398) DNA-directed RNA polymerase I 190 kDa polypeptide (EC| 2.7.7.6) Length = 1689 Score = 30.4 bits (67), Expect = 5.4 Identities = 19/71 (26%), Positives = 33/71 (46%) Frame = -2 Query: 696 DGNKVVLSVSNADTKVDDAEFEENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKNYH 517 + +KV L KV+D +E E S + K + L EKQ T+ ++ + Sbjct: 1408 EADKVALRQLKGSNKVEDVNMDEEEDEGFKSDESVSDFKERKLLEKQNTV---SISERRE 1464 Query: 516 LKMKASRFIFS 484 L++K ++ I S Sbjct: 1465 LQLKTAKEILS 1475
>ARX1_CANGA (Q6FL44) Probable metalloprotease ARX1 (EC 3.-.-.-) (Associated| with ribosomal export complex protein 1) Length = 588 Score = 27.7 bits (60), Expect(2) = 6.8 Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 37/139 (26%) Frame = -2 Query: 672 VSNADTKVDDAEFEENEVYAIDIV-------------------TSTGEGKPKLLDEKQTT 550 V+++ DD + EVY ID+ + TG+ K ++ Sbjct: 298 VASSAIPSDDFSVDVGEVYLIDLKFCPLTDCQKKGLITLETVDSYTGKSHKKNQLIARSG 357 Query: 549 IYKRAVDKNYHLKMKASRFI-------------FSEISQKFPIMPFTARALEE-----KR 424 Y R ++Y LK+K +R + S +S FP+ FTA + + Sbjct: 358 AYVRDYAQSYTLKLKTARQLLTKIDKNGVYPLKLSHLSTDFPLTEFTAEESDAVKKDLRS 417 Query: 423 ARLGLVECMNHELLQPYPV 367 RLG+ E N+ L P+ Sbjct: 418 FRLGMNEITNNFLCVETPI 436 Score = 20.8 bits (42), Expect(2) = 6.8 Identities = 11/19 (57%), Positives = 12/19 (63%), Gaps = 1/19 (5%) Frame = -1 Query: 310 AKWV*QDHV-TSTTAVGAL 257 AKWV DH+ ST GAL Sbjct: 439 AKWVPWDHILNSTNKNGAL 457
>K1C13_HUMAN (P13646) Keratin, type I cytoskeletal 13 (Cytokeratin-13) (CK-13)| (Keratin-13) (K13) Length = 458 Score = 29.6 bits (65), Expect = 9.2 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = -2 Query: 699 IDGNKVVLSVSNADTKVDDAEFE-ENEVYAIDIVTSTGEGKPKLLDE 562 I+ N+V+L + NA VDD + ENE+ V + G ++LDE Sbjct: 171 IENNRVILEIDNARLAVDDFRLKYENELALRQSVEADINGLRRVLDE 217
>GUNB_NEOPA (Q12647) Endoglucanase B precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase B) (Cellulase B) Length = 473 Score = 29.6 bits (65), Expect = 9.2 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 8/49 (16%) Frame = +2 Query: 260 GSNCCSGCDVILSDPFGINNTVNLMWA--------TRSPCFSWRTGYGC 382 G +CC+GC+V +D G N W T C+S + GY C Sbjct: 398 GYSCCNGCEVEYTDSDGEWGVENGNWCGIKSSCSNTSRICWSEKLGYPC 446 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,462,304 Number of Sequences: 219361 Number of extensions: 1717794 Number of successful extensions: 4436 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 4309 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4421 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
